View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4266_low_29 (Length: 258)
Name: NF4266_low_29
Description: NF4266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4266_low_29 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 9 - 258
Target Start/End: Original strand, 9958434 - 9958683
Alignment:
| Q |
9 |
agcagagagcattgtgcaagacattgaaaatatggttcgggcctttatcgaaaaggtaatgattctatataaaactaaatgatttctgatgcatatgaga |
108 |
Q |
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| T |
9958434 |
agcagagagcattgtgcaagacattgaaaatatggttcgggcctttatcgaaaaggtaatgattctatataaaactaaatgatttctgatgcatatgaga |
9958533 |
T |
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| Q |
109 |
acatttatttgttatgaggtgaaaaatgttaaaggcaataattaaagacttgtattgaaagctcagctttatgctcacaaaacttcatattcaatttaag |
208 |
Q |
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| T |
9958534 |
acatttatttgttatgaggtgaaaaatgttaaaggcaataattaaagacttgtattaaaagctcagctttatgctcacaaaacttcatattcaatttaag |
9958633 |
T |
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| Q |
209 |
ccattcatgaacgtaccgtaacttattccttattgcagccgaattgcatc |
258 |
Q |
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| T |
9958634 |
ccattcatgaacgtaccgtaacttattccttattgcagccgaattgcatc |
9958683 |
T |
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