View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4266_low_8 (Length: 416)
Name: NF4266_low_8
Description: NF4266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4266_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 390; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 1 - 405
Target Start/End: Original strand, 36702144 - 36702546
Alignment:
| Q |
1 |
tctctccacacttgcttccaaggatcaatattcctccaactacctatcgttattattcatcttcctcagtaagttcattcaattcattacttttcatttg |
100 |
Q |
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| T |
36702144 |
tctctccacacttgcttccaaggatcaatattcctccaactacctatcgttattattcatcttcctcagtaagttcattcaattcattacttttcatttg |
36702243 |
T |
|
| Q |
101 |
gtttatttagtttctaataataccaaagtggagtccgtaaagcctagctcatctggtaatgccgaaattgttaggttggatgccaaagtgaaaatattta |
200 |
Q |
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| T |
36702244 |
gtttatttagtttctaataataccaaagtggagtccgtaaagcctagctcatctggtaatgccgaaattgttaagttggatgccaaagtgaaaatattta |
36702343 |
T |
|
| Q |
201 |
catgttagctttcttgcttgcttaattatttctttgcaccatatatagattaattaagtcatcttatagttgtctcttgttaataatctatagcctcgtc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36702344 |
catgttagctttcttgcttgcttaattatttctttgcacc--atatagattaattaagtcatcttatagttgtctcttgttaataatctatagcctcgtc |
36702441 |
T |
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| Q |
301 |
gattggatttgaccgtgcaattcttggacaaacttcctagagttttgtttgatgaggatttacaagcaagggattcactgtaagtttctttttagttatg |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36702442 |
gattggatttgaccgtgcaattcttggacaaacttcctagagttttgtttgatgaggatttacaagcaagggattcactgtaagtttctttttagttatg |
36702541 |
T |
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| Q |
401 |
ttcat |
405 |
Q |
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| T |
36702542 |
ttcat |
36702546 |
T |
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