View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4267_high_35 (Length: 354)
Name: NF4267_high_35
Description: NF4267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4267_high_35 |
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Alignment Details
Target: chr7 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 13 - 338
Target Start/End: Original strand, 26942654 - 26942976
Alignment:
| Q |
13 |
catcatcaataatccacaactccatcaagttgatatagagacttcgtcatcatcgtcatctctaatagctgccccaaatcaaccatgaagccaagatgtt |
112 |
Q |
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| T |
26942654 |
catcatcaataatccacaactccatcaagttgatatagagacttcgtcatcatcgtcatctctaatagctgccccaaatcaaccatgaagccaagatatt |
26942753 |
T |
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| Q |
113 |
cctccttgcgcttgaggattcaatagatggcacatttcattgaaagcgaggagacaaacaacctccttcaagacttgttgccgttcgtccaacaacaaca |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |
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| T |
26942754 |
cctccttgcgcttgaggattcaatagatggcacatttcattgaaagcgaggagacaaacaacctccttcaagacttgttgtcgttcgtc---caacaaca |
26942850 |
T |
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| Q |
213 |
gttccaagtgatttccaaacaaagtgagtgtttagctcatgtctagaacaaacattgtgaactcgtgttggtcttagtttagaaccctagctcatgccaa |
312 |
Q |
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||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26942851 |
gttccaagtcatttccagacaaagtgagtgtttagctcatgtctagagcaaacattgtgaactcgtgttggtcttagtttagaaccctagctcatgccaa |
26942950 |
T |
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| Q |
313 |
tgtgtgatgatccttcatgaggagtc |
338 |
Q |
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|||||||||||||||||||||||||| |
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| T |
26942951 |
tgtgtgatgatccttcatgaggagtc |
26942976 |
T |
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