View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4267_high_41 (Length: 334)
Name: NF4267_high_41
Description: NF4267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4267_high_41 |
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Alignment Details
Target: chr8 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 16 - 328
Target Start/End: Original strand, 43883850 - 43884160
Alignment:
| Q |
16 |
atttatctatttgtgactcattttattaaagttgtaggatcannnnnnnnaattcaattgggctaatatcacaatttataattaaattttataaaacttc |
115 |
Q |
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| T |
43883850 |
atttatctatttgtgactcattttattaaagttgtaggatcattttttttaattcaattgggctaatatcacaatttataattaaattttataaaacttc |
43883949 |
T |
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| Q |
116 |
aaaagaaaatgatggtgtgtgcaagagttcttaaaatagtattgtaccaacatgttaaaagttaatttttaattgatactttgatgtgaaccaagagata |
215 |
Q |
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| T |
43883950 |
aaaagaaaatgatggtgtgtgcaagagttcttaaactagtattgtaccaacatgttaaaagttaatttttaattgatactttgatgtgaaccaagagata |
43884049 |
T |
|
| Q |
216 |
tgcctgccacacttattaccacagcaaaagttagaagacatctttttaccatgaataacagttattttgtaccatcacattcattttctaattcacagga |
315 |
Q |
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| T |
43884050 |
tgactgccacacttattacctcagaaaaagttagaagacatc--tttaccatgaataacagttattttgtacaatcacattcattttctaattcacagga |
43884147 |
T |
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| Q |
316 |
aagttcatctctc |
328 |
Q |
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|||||||| |||| |
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| T |
43884148 |
aagttcatatctc |
43884160 |
T |
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