View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4267_high_51 (Length: 304)
Name: NF4267_high_51
Description: NF4267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4267_high_51 |
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Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 40470545 - 40470829
Alignment:
| Q |
1 |
tgtgtggctctactaaaccttcctctgatactgtcacttcatttgattgattctcatttttcctaaagaatgagaaacttttaacataagttatccttta |
100 |
Q |
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| T |
40470545 |
tgtgtggctctactaaaccttcctctgatactgccacttcatttgattgattctcatttttcctaaagaatgagaaacttttaacataagttatccttta |
40470644 |
T |
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| Q |
101 |
attaaaaatttatcatgacaaattagttagttacctcaaaaattataattactaatatgttactgtatggacaatgcacaaacttaattgacttaatgcg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |
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| T |
40470645 |
attaaaaatttatcatgacaaattagttagttacctcaaaaattataattactaatatgttactgtatagacaatgcacaaacttaattgacttaatgtg |
40470744 |
T |
|
| Q |
201 |
gaagaaatcatgtcacaaataaccaatgatttaaaataaaaactcagaaaagggattgaatcaatgaaacatccgaatcatggtt |
285 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |
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| T |
40470745 |
gaagaaattatgtcacaaataaccaatgatttaaaataaaaactcagacaagagattgaatcaatgaaacatccgaatcatggtt |
40470829 |
T |
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