View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4267_high_62 (Length: 276)
Name: NF4267_high_62
Description: NF4267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4267_high_62 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 17 - 276
Target Start/End: Original strand, 4707673 - 4707934
Alignment:
| Q |
17 |
aaccttttgggttaagcatcagttgggacttgggaaaccattttccaatggtgaatttctttgagacagggataaagtagagagattcttggagttggaa |
116 |
Q |
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| T |
4707673 |
aaccttttgggttaagcatcagttgggacttgggaaaccatttttcaatggtgaatttctttgagacaaggataaagtagagagattcttggagttggaa |
4707772 |
T |
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| Q |
117 |
caaatactttatagggaatacttttttagtagagttcatgatataacagtagaaggtgaaaaaactattacacttggattagataataacaaaaaacatg |
216 |
Q |
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| T |
4707773 |
caaatactttacagggaatacttttttagtagagttcatgatataacagtagaaggtgaaaaaactattacacttggattagataataacaaaaaacatg |
4707872 |
T |
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| Q |
217 |
aaagaattcaa--gtaaaatgagtaaatatagattattttattattatacttgcaacaacat |
276 |
Q |
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| T |
4707873 |
aaagaattcaaatgtaaaatgagtaaatatagattattttattattatacttgcaacaacat |
4707934 |
T |
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