View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4267_high_67 (Length: 251)
Name: NF4267_high_67
Description: NF4267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4267_high_67 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 30552472 - 30552712
Alignment:
| Q |
11 |
caaagggacatgattagttacaagtgacaagtttaa-----aaaatgtcataccgtgtgcgctaaggaatatgaaaaatatggaaaaaagccagatccaa |
105 |
Q |
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| T |
30552472 |
caaagggacatgattagttacaagtgacaagtttaatatgtaaaatgacataccgtgtgcgctaaggaatatgaaaaatatggaaaaaagccagatccaa |
30552571 |
T |
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| Q |
106 |
aacctgcaagagtatcaaaagattagttaatcaagattgtttagtcttgtataatatacttttgaaattactaaagaatctattttgtaaatatttatgt |
205 |
Q |
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| T |
30552572 |
aacctgcaagagtatcaaaagattagttaatcaagatagttt-----tgtataatatacttttgaaattactaaagaatctattttgtaaatatttatgt |
30552666 |
T |
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| Q |
206 |
agctcagttatattttctgcttgtgtccatattataattataaacc |
251 |
Q |
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| T |
30552667 |
agctcagttatattttctgcttgtgtccatattataattagaaacc |
30552712 |
T |
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