View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4267_low_10 (Length: 522)
Name: NF4267_low_10
Description: NF4267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4267_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 487; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 487; E-Value: 0
Query Start/End: Original strand, 1 - 514
Target Start/End: Original strand, 29661801 - 29662315
Alignment:
| Q |
1 |
aacatattatagtcctcataatgtttaacagattaaaatctaaataaacagaaacatatataacatacatgcagttggaaaaggtacttgcatgaacatt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29661801 |
aacatattatagtcctcataatgtttaacagattaaaatctaaataaacagaaacatatataacatacatgcagttggaaaaggtacttgcatgaacatt |
29661900 |
T |
|
| Q |
101 |
tcttcaattaatccttgttaaaaaatcctccaaaaccacccttcttcttttgtggaactaccacagagttcttgccaccaccagtagtgcctttaccact |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |
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| T |
29661901 |
tcttcaattaatccttgttaaaaaatcctccaaaaccacccttcttcttttgtggaactacaacagagttcttgccaccactagtagtgcctttaccact |
29662000 |
T |
|
| Q |
201 |
agtagtacctctactagtagtgcctctactattattcttctcttcaaccttcttgaggataggatcagtttcatagaactgatcttcttttgttaaacca |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
29662001 |
agtagtacctctactagtagtgcctctactattattcttctcttcaaccttcttgagaataggatcagtttcatagaactgatcttcttttgttaaacca |
29662100 |
T |
|
| Q |
301 |
cccacaatccaatcccaaaaacctttctcttgcttgctactgccaccacctgtagtaccctttgcacctgtagctgcaaagactcttcctgttgttggaa |
400 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
29662101 |
ccaacaatccaatcccaaaaacctttctcttgcttgctactgccaccacctgtagtaccctttgcacctgtagctgcaaagactcttcccgttgttggaa |
29662200 |
T |
|
| Q |
401 |
ccattggcaacatggtgatagaagccattaattctcctagcttaatttgaaaaattatatcaactag-aaactaaaatataatataaattctctttgcct |
499 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
29662201 |
ccattggcaacatggtgatagaagccattaattctcctagcttaatttgaaaaattatatcaactagaaaactaaaatataatataaattctctttgcct |
29662300 |
T |
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| Q |
500 |
agtgttattgatgat |
514 |
Q |
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||||||||||||||| |
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| T |
29662301 |
agtgttattgatgat |
29662315 |
T |
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