View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4267_low_36 (Length: 359)
Name: NF4267_low_36
Description: NF4267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4267_low_36 |
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Alignment Details
Target: chr1 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 20 - 343
Target Start/End: Complemental strand, 37446345 - 37446022
Alignment:
| Q |
20 |
tttttatctcaaattgccttttatctttataacaatcaagtgggtgcgccttttcaaaataaaacaaaaatcattgataacattcataatttcatatact |
119 |
Q |
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| T |
37446345 |
tttttatctcaaattgccttttatctttataacaatcaagtgggtgcgccttttcaaaataaaacaaaaatcattgataacattcataatttcatatact |
37446246 |
T |
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| Q |
120 |
atataaacaaacccgatcaagagaaatataaacacacacattcagagtcacacaccaataacatacattatcgatcttagttgagtcatcattgcaaagc |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
37446245 |
atataaacaaacccgatcaagagaaatataaacacacatattcagagtcacacaccaataacatacattatcgatcttagttgagtcatcattacaaagc |
37446146 |
T |
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| Q |
220 |
gaaccatataaaactcattcctctctagtatccacacttgaaacgggtcctatatatggaacacattaacgagtatgactggaacatgactcacttacta |
319 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37446145 |
gaaccatataaaactcattcctctctagtatccacacttgaaacgggtcctatatatggaacacattaacgagtatgactggaacatgactcacttacta |
37446046 |
T |
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| Q |
320 |
tccaacaatgatgatgctcaaact |
343 |
Q |
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|||||||||||||||||||||||| |
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| T |
37446045 |
tccaacaatgatgatgctcaaact |
37446022 |
T |
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