View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4267_low_67 (Length: 266)
Name: NF4267_low_67
Description: NF4267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4267_low_67 |
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Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 13 - 250
Target Start/End: Original strand, 30900604 - 30900841
Alignment:
| Q |
13 |
aacctgtgtatgtctttctggtatcttcattggcaaagcaaacattccacagttgaatttactttagtgcaactctaaaggctgctagacttgaattcat |
112 |
Q |
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| T |
30900604 |
aacctgtgtatgtctttctggtatcttcattggcaaagcaaacattccacagttgaatttactttagtgcaactctaaaggctgctagacttgaattcat |
30900703 |
T |
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| Q |
113 |
gtataatttctcaataaaattccttaaaatgaaatctagaaggtattgtcgatcatgtactgaaatcttaatacttaatcttccttttgtttttgtttgt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30900704 |
gtataatttctcaataaaattccttaaaatgaaatctagaaggtattgtcgatcatttactgaaatcttaatacttaatcttccttttgtttttgtttgt |
30900803 |
T |
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| Q |
213 |
tccaaaatggattccatcaaaagagactgggttttatc |
250 |
Q |
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||| |||||||||||||||||||||||||||||||||| |
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| T |
30900804 |
tccgaaatggattccatcaaaagagactgggttttatc |
30900841 |
T |
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