View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4267_low_69 (Length: 255)
Name: NF4267_low_69
Description: NF4267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4267_low_69 |
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Alignment Details
Target: chr5 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 29661622 - 29661391
Alignment:
| Q |
1 |
ttttatgtgtgcatctgtatcagtgcctcgtagccgctaatcaatcagattcgatctacaatttacacaatcttgctttatatggtggttttagtcctgg |
100 |
Q |
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| T |
29661622 |
ttttatgtgtgcatctgtatcagtgcctcgtagccgctaatcaatcagattcgatctacaatttacacaatcttgctttatatggtggttttagtcctgg |
29661523 |
T |
|
| Q |
101 |
tttttgaagtcatggaaattcattctaaatgaaccttgttaggtcatgtaatgagctaggcagt--taatgttgttggtctaagtggagatggtaattat |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |
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| T |
29661522 |
tttttgaagtcatggaaattcattctaaatgaaccttgttaggtcatgtaatgagctaggcagttataatgttgttggtctaagtggagatgataattat |
29661423 |
T |
|
| Q |
199 |
aagcttatgatttgttctgtttgttgatgata |
230 |
Q |
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||||||||||||| |||||||||||||||||| |
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| T |
29661422 |
aagcttatgatttcttctgtttgttgatgata |
29661391 |
T |
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