View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4267_low_73 (Length: 251)
Name: NF4267_low_73
Description: NF4267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4267_low_73 |
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Alignment Details
Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 11822159 - 11822392
Alignment:
| Q |
1 |
tgattttgcggaaaattgtttcttataaaaatttggttgttaactaatttcatattacttggaccaagaatttgattttaaaaagcaatcgtacatttta |
100 |
Q |
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| T |
11822159 |
tgattttgcggaaaattgtttcttataaaaatttggttgttaactaatttcatattacttggaccaagaatttgattttaaaaagcaatcgtacattttg |
11822258 |
T |
|
| Q |
101 |
ttggatatcgttcatagtttatcgataaacatagtatttaaacacaagttgtaatacagacgcattaggccaaaatccgtgaccaaaagttgtaacacan |
200 |
Q |
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|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| |
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| T |
11822259 |
ttggatatggttcatagtttatcgataaacgtagtatttaaacacaagttgtaatacaggcgcattaggccaaaacccgtgaccaaaagttgtaatacat |
11822358 |
T |
|
| Q |
201 |
nnnnnnggttttattaaacaggtgacattggaag |
234 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
11822359 |
ttttttggttttattaaacaggtgacattggaag |
11822392 |
T |
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