View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4268_high_14 (Length: 285)
Name: NF4268_high_14
Description: NF4268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4268_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 17 - 268
Target Start/End: Complemental strand, 30305133 - 30304882
Alignment:
| Q |
17 |
tactcaaatctatgaatccatagtgaatcgttgatatgaaaaagcatgttgcaaatcaagtccttgatatcatgccgaggaacatgggtagcatggagat |
116 |
Q |
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| T |
30305133 |
tactcaaatctatgaatccatagtgaatctttgatatgaaaaagcatgttgcaaatcaagtccttgatatcatgccgaggaacatgggtagcaaggagat |
30305034 |
T |
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| Q |
117 |
cccaagaacaagggctgtttagaaaaaggtcgcaaacttcacattgagtttctttggtttggacaaaatgaaaacatgatcatataaatgcccaatgaat |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
30305033 |
cccaagaacaagggctgtttagaaaaaggtcgcaaacttcacattgagtttctttggtttggacaaaatgaaaacatgatcatataaatgtccaatgaat |
30304934 |
T |
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| Q |
217 |
cgatcctttacaacacaaggaagaggaacaattcatatcctcaaaatgaaac |
268 |
Q |
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| T |
30304933 |
cgatcctttacaacacaaggaagaggaacaattcatatcctcaaaatgaaac |
30304882 |
T |
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