View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4268_high_24 (Length: 201)
Name: NF4268_high_24
Description: NF4268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4268_high_24 |
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Alignment Details
Target: chr5 (Bit Score: 164; Significance: 7e-88; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 576686 - 576857
Alignment:
| Q |
15 |
agaatcctttcaaatgaactggtatcgttcacatatgacggtgatctcatgaatgattattccttattttacacattctcagtctcgaatgcaactatta |
114 |
Q |
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| T |
576686 |
agaatcctttcaaatgaactggtatctttcacatatgacggtgatctcatgaatgattattccttattttacacattctcagtctcgaatgcaactatta |
576785 |
T |
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| Q |
115 |
agcttcatgaacaacacaataatatgttgcatgctggacattttatctacaaacttttcatagccctctctg |
186 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
576786 |
agcttcatgaacaacacaataatatgttgcatgctggacattttatctacaaacttttcatagccctttctg |
576857 |
T |
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