View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4270-Insertion-1 (Length: 257)
Name: NF4270-Insertion-1
Description: NF4270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4270-Insertion-1 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 6613843 - 6614100
Alignment:
| Q |
1 |
gttatttcaacaacacaacagtgctgctgcgcctgtcattgatgtcatacaacaatctgtttcagccaatgataacatgagcctcacggcaccctttaca |
100 |
Q |
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| T |
6613843 |
gttatttcaacaacacaacaatgctgctgcgcctgtcattgatgtcatacaacaatctgtttcagccaatgataacatgagcctcacggcaccctttaca |
6613942 |
T |
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| Q |
101 |
aaagaggaatttcgggacgcaatgttttccatgcatccggacaagtgcccaggccttgacggctatagtccaggattttatcagcatttctggggtctat |
200 |
Q |
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| T |
6613943 |
aaagaggaatttcaggacgcaatgttttccatgcatccggacaagtgcccaggccttgacggctatagtccgggattttatcagcatttctggagtctat |
6614042 |
T |
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| Q |
201 |
gcagtgatgatatttac-aagaatgttgtgcttggcttgatacagggcagttcccacc |
257 |
Q |
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| T |
6614043 |
gcagtgatgatatttacaaagaatgttgtgcttggcttgatacagggcagttcccacc |
6614100 |
T |
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