View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4270-Insertion-11 (Length: 60)
Name: NF4270-Insertion-11
Description: NF4270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4270-Insertion-11 |
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| [»] chr6 (2 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 56; Significance: 5e-24; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 56; E-Value: 5e-24
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 14226252 - 14226307
Alignment:
| Q |
5 |
tcacaatacccggaaaatgaacattcatcatgtagtccttccaaacaatatttttg |
60 |
Q |
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| T |
14226252 |
tcacaatacccggaaaatgaacattcatcatgtagtccttccaaacaatatttttg |
14226307 |
T |
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Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 14220565 - 14220620
Alignment:
| Q |
5 |
tcacaatacccggaaaatgaacattcatcatgtagtccttccaaacaatatttttg |
60 |
Q |
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| T |
14220565 |
tcacaagacctggaaaatgaacgttcatcatgtagtccttccaatcaatatttttg |
14220620 |
T |
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