View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4270-Insertion-2 (Length: 171)
Name: NF4270-Insertion-2
Description: NF4270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4270-Insertion-2 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 3 - 171
Target Start/End: Complemental strand, 39000878 - 39000710
Alignment:
| Q |
3 |
tatgtttggttgaacaatacctctccaatcattttcaatgtttaaaaacgcaagacaggttattaaattcattatcttggtaatgcagtatttccatatt |
102 |
Q |
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| T |
39000878 |
tatgtttggttgaacaatacctctccaatcattttcaatgtttaaaaacgcaagacaagttattaaattcattatcttggtaatgcagtatttccatatt |
39000779 |
T |
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| Q |
103 |
tgacatgaacaaaccctcatggaagattaaataattgttaagccaaaatgaaatatagaaaagagatga |
171 |
Q |
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| T |
39000778 |
tgacatgaacaaaccctcatggaagattaaataattgttaagccaaaatgaaatatagaaaagagatga |
39000710 |
T |
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