View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4270_low_30 (Length: 269)

Name: NF4270_low_30
Description: NF4270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4270_low_30
NF4270_low_30
[»] chr5 (38 HSPs)
chr5 (168-263)||(40738889-40738984)
chr5 (170-263)||(18864429-18864522)
chr5 (171-263)||(43548576-43548668)
chr5 (172-262)||(10552506-10552596)
chr5 (172-262)||(15272763-15272853)
chr5 (170-263)||(4621146-4621238)
chr5 (170-263)||(36294180-36294273)
chr5 (167-255)||(8232539-8232627)
chr5 (171-263)||(31484649-31484741)
chr5 (171-263)||(31498837-31498929)
chr5 (171-263)||(42437368-42437460)
chr5 (172-263)||(6245188-6245279)
chr5 (170-261)||(12189301-12189392)
chr5 (170-256)||(10666137-10666223)
chr5 (170-263)||(37340799-37340892)
chr5 (174-265)||(18978453-18978544)
chr5 (171-257)||(41881919-41882005)
chr5 (178-263)||(13210982-13211067)
chr5 (174-263)||(37274608-37274697)
chr5 (175-263)||(7338624-7338712)
chr5 (170-255)||(18522161-18522245)
chr5 (172-255)||(37105851-37105934)
chr5 (165-259)||(4156166-4156260)
chr5 (204-262)||(27308706-27308764)
chr5 (213-259)||(37865917-37865963)
chr5 (171-259)||(9065698-9065786)
chr5 (171-259)||(43293655-43293743)
chr5 (169-259)||(31527575-31527665)
chr5 (169-259)||(33280807-33280897)
chr5 (171-255)||(13145882-13145966)
chr5 (169-257)||(43518291-43518379)
chr5 (170-257)||(19034720-19034807)
chr5 (170-256)||(24559067-24559153)
chr5 (170-256)||(24600099-24600185)
chr5 (168-246)||(25084853-25084931)
chr5 (168-246)||(25142826-25142904)
chr5 (168-246)||(6469944-6470022)
chr5 (219-255)||(35319774-35319810)
[»] chr7 (54 HSPs)
chr7 (170-263)||(24980854-24980947)
chr7 (170-263)||(45870161-45870254)
chr7 (170-263)||(40862358-40862451)
chr7 (171-262)||(48612861-48612952)
chr7 (169-263)||(39597861-39597955)
chr7 (170-263)||(43775882-43775975)
chr7 (171-263)||(46101804-46101896)
chr7 (171-263)||(47540290-47540382)
chr7 (171-263)||(47546847-47546939)
chr7 (171-254)||(40305474-40305557)
chr7 (169-263)||(29042142-29042235)
chr7 (170-254)||(20492683-20492767)
chr7 (168-263)||(10594081-10594176)
chr7 (171-262)||(12847167-12847258)
chr7 (170-259)||(34591675-34591764)
chr7 (170-263)||(36688728-36688820)
chr7 (171-263)||(44709888-44709980)
chr7 (170-245)||(25764873-25764948)
chr7 (169-263)||(241680-241773)
chr7 (168-254)||(19473935-19474020)
chr7 (171-259)||(47065932-47066020)
chr7 (170-257)||(21279063-21279150)
chr7 (174-249)||(25066568-25066643)
chr7 (170-255)||(12428598-12428683)
chr7 (170-259)||(26015858-26015947)
chr7 (169-258)||(35924228-35924317)
chr7 (170-259)||(38876046-38876135)
chr7 (170-259)||(43246949-43247038)
chr7 (168-263)||(7883668-7883763)
chr7 (171-259)||(32542175-32542263)
chr7 (171-263)||(42436496-42436588)
chr7 (171-259)||(46322038-46322126)
chr7 (168-259)||(46923875-46923966)
chr7 (170-256)||(25225516-25225602)
chr7 (171-257)||(38283585-38283671)
chr7 (168-246)||(43047091-43047169)
chr7 (171-256)||(39598531-39598615)
chr7 (171-259)||(7790903-7790991)
chr7 (170-246)||(39074361-39074437)
chr7 (171-259)||(40705504-40705592)
chr7 (213-259)||(7900475-7900521)
chr7 (171-257)||(25876776-25876862)
chr7 (213-259)||(27324997-27325043)
chr7 (170-255)||(30173462-30173547)
chr7 (170-256)||(32662363-32662449)
chr7 (168-257)||(40995184-40995273)
chr7 (171-257)||(47779503-47779589)
chr7 (170-246)||(21874636-21874712)
chr7 (171-246)||(42095779-42095854)
chr7 (212-263)||(48874375-48874426)
chr7 (213-255)||(8203437-8203479)
chr7 (213-255)||(8215914-8215956)
chr7 (171-256)||(40994808-40994893)
chr7 (223-263)||(19021050-19021090)
[»] chr1 (54 HSPs)
chr1 (170-263)||(26307845-26307938)
chr1 (171-263)||(29922217-29922309)
chr1 (170-263)||(40498616-40498709)
chr1 (170-263)||(51002024-51002117)
chr1 (169-265)||(8114895-8114991)
chr1 (170-263)||(7009007-7009099)
chr1 (170-263)||(17605726-17605819)
chr1 (174-263)||(41712763-41712852)
chr1 (172-256)||(17474665-17474749)
chr1 (170-265)||(9640882-9640977)
chr1 (172-263)||(19514129-19514220)
chr1 (168-263)||(51776026-51776121)
chr1 (170-263)||(3485814-3485908)
chr1 (170-263)||(32086481-32086574)
chr1 (171-263)||(12601854-12601945)
chr1 (171-263)||(13146022-13146113)
chr1 (171-263)||(35273826-35273918)
chr1 (171-265)||(6016604-6016698)
chr1 (166-259)||(13942138-13942231)
chr1 (194-262)||(14290287-14290355)
chr1 (167-263)||(5672891-5672983)
chr1 (175-254)||(23444345-23444424)
chr1 (169-259)||(50727795-50727885)
chr1 (170-259)||(15932785-15932874)
chr1 (170-259)||(42948188-42948277)
chr1 (167-259)||(24317177-24317269)
chr1 (171-259)||(34270769-34270857)
chr1 (165-259)||(33010782-33010876)
chr1 (174-263)||(19247770-19247859)
chr1 (170-259)||(28852915-28853004)
chr1 (170-255)||(32561263-32561347)
chr1 (170-255)||(48933214-48933298)
chr1 (171-259)||(2482628-2482716)
chr1 (171-259)||(39569451-39569539)
chr1 (167-259)||(52044385-52044477)
chr1 (176-259)||(20581504-20581587)
chr1 (170-257)||(26151163-26151250)
chr1 (203-262)||(35841484-35841543)
chr1 (168-259)||(49823201-49823292)
chr1 (168-259)||(52024722-52024813)
chr1 (171-265)||(18909215-18909309)
chr1 (171-257)||(40400033-40400119)
chr1 (168-253)||(13240221-13240306)
chr1 (169-246)||(40536797-40536874)
chr1 (171-259)||(6653224-6653312)
chr1 (171-259)||(44721871-44721959)
chr1 (171-263)||(46291815-46291907)
chr1 (168-263)||(24527629-24527723)
chr1 (212-259)||(51677244-51677291)
chr1 (168-246)||(51290546-51290624)
chr1 (171-255)||(2138245-2138329)
chr1 (171-246)||(11173509-11173584)
chr1 (165-244)||(14247456-14247535)
chr1 (171-246)||(39982263-39982338)
[»] chr8 (44 HSPs)
chr8 (172-263)||(5347469-5347560)
chr8 (170-263)||(4005764-4005857)
chr8 (170-263)||(36057724-36057817)
chr8 (171-263)||(31793841-31793933)
chr8 (170-262)||(41942354-41942446)
chr8 (171-257)||(38945688-38945774)
chr8 (174-263)||(12722559-12722648)
chr8 (168-259)||(35605334-35605425)
chr8 (168-262)||(38234414-38234508)
chr8 (169-263)||(38460094-38460187)
chr8 (170-266)||(2828303-2828399)
chr8 (170-262)||(35329720-35329811)
chr8 (171-263)||(42687933-42688025)
chr8 (172-255)||(4229637-4229720)
chr8 (170-259)||(22439601-22439690)
chr8 (171-259)||(43664320-43664408)
chr8 (168-259)||(34565024-34565115)
chr8 (168-258)||(26290775-26290865)
chr8 (168-258)||(26304032-26304122)
chr8 (168-258)||(26337387-26337477)
chr8 (185-263)||(39712691-39712768)
chr8 (211-256)||(5550-5595)
chr8 (171-259)||(24822719-24822807)
chr8 (171-257)||(5988188-5988274)
chr8 (173-259)||(39365248-39365334)
chr8 (170-259)||(3032893-3032982)
chr8 (170-259)||(17122089-17122178)
chr8 (174-254)||(7970034-7970114)
chr8 (171-259)||(23357252-23357340)
chr8 (170-257)||(3137222-3137309)
chr8 (169-256)||(8656552-8656639)
chr8 (172-263)||(11266134-11266225)
chr8 (170-257)||(26122523-26122610)
chr8 (167-246)||(28909658-28909737)
chr8 (174-256)||(8376243-8376325)
chr8 (213-259)||(42512201-42512247)
chr8 (169-246)||(17601332-17601409)
chr8 (170-246)||(11587897-11587973)
chr8 (201-253)||(26992318-26992370)
chr8 (170-246)||(28885720-28885796)
chr8 (172-256)||(34917539-34917623)
chr8 (213-257)||(38168483-38168527)
chr8 (171-246)||(15839455-15839530)
chr8 (168-253)||(12713578-12713663)
[»] chr3 (49 HSPs)
chr3 (170-263)||(36885745-36885838)
chr3 (170-263)||(38145245-38145338)
chr3 (168-263)||(36232676-36232771)
chr3 (171-263)||(7681008-7681100)
chr3 (168-255)||(44354511-44354598)
chr3 (168-256)||(33392508-33392596)
chr3 (171-263)||(35039572-35039664)
chr3 (169-263)||(19941680-19941774)
chr3 (172-263)||(51662167-51662258)
chr3 (172-262)||(48584835-48584925)
chr3 (170-255)||(2613339-2613424)
chr3 (171-263)||(36841110-36841202)
chr3 (171-263)||(47098308-47098400)
chr3 (168-263)||(30418687-30418782)
chr3 (172-263)||(52343083-52343174)
chr3 (168-263)||(52812125-52812219)
chr3 (170-259)||(4516023-4516112)
chr3 (171-256)||(11123858-11123943)
chr3 (174-263)||(49779859-49779947)
chr3 (171-263)||(11095647-11095739)
chr3 (177-257)||(14279112-14279192)
chr3 (167-259)||(25710882-25710974)
chr3 (171-259)||(37971683-37971771)
chr3 (168-263)||(4596431-4596525)
chr3 (166-259)||(4044817-4044910)
chr3 (170-259)||(20835591-20835680)
chr3 (170-259)||(22781916-22782005)
chr3 (174-263)||(35155765-35155854)
chr3 (170-259)||(38871119-38871208)
chr3 (171-259)||(10841441-10841529)
chr3 (172-263)||(41588879-41588968)
chr3 (170-257)||(40586182-40586269)
chr3 (172-259)||(41069837-41069923)
chr3 (171-257)||(10999757-10999843)
chr3 (201-259)||(33712632-33712690)
chr3 (170-246)||(26090200-26090276)
chr3 (171-259)||(53974310-53974398)
chr3 (171-257)||(20048334-20048420)
chr3 (170-256)||(33966894-33966980)
chr3 (181-255)||(35233678-35233751)
chr3 (169-246)||(32236130-32236207)
chr3 (171-259)||(36430267-36430355)
chr3 (171-246)||(84388-84463)
chr3 (201-256)||(54556377-54556432)
chr3 (213-259)||(6268367-6268413)
chr3 (212-254)||(39627135-39627177)
chr3 (214-263)||(8947866-8947914)
chr3 (172-256)||(1774036-1774120)
chr3 (170-246)||(20657409-20657485)
[»] chr2 (38 HSPs)
chr2 (171-263)||(45443548-45443640)
chr2 (170-257)||(13480548-13480635)
chr2 (168-256)||(4331881-4331969)
chr2 (171-263)||(38629402-38629494)
chr2 (171-263)||(44798809-44798901)
chr2 (170-263)||(7722666-7722759)
chr2 (168-262)||(26170973-26171067)
chr2 (168-259)||(21657924-21658015)
chr2 (170-263)||(458602-458695)
chr2 (170-259)||(34202278-34202367)
chr2 (167-259)||(2390683-2390775)
chr2 (204-263)||(31569652-31569711)
chr2 (170-263)||(44456805-44456895)
chr2 (166-259)||(3178221-3178314)
chr2 (170-259)||(45505782-45505871)
chr2 (195-263)||(5109188-5109256)
chr2 (170-259)||(927063-927152)
chr2 (170-259)||(15011818-15011907)
chr2 (174-259)||(40659233-40659317)
chr2 (170-259)||(42342967-42343056)
chr2 (171-259)||(1481811-1481899)
chr2 (171-255)||(4073499-4073583)
chr2 (171-259)||(13196134-13196222)
chr2 (171-259)||(25853429-25853517)
chr2 (171-259)||(40811769-40811857)
chr2 (171-259)||(44143360-44143448)
chr2 (170-257)||(10638777-10638864)
chr2 (201-259)||(43577033-43577091)
chr2 (171-259)||(1520176-1520264)
chr2 (171-263)||(10554756-10554848)
chr2 (180-263)||(31640799-31640882)
chr2 (171-257)||(39697776-39697862)
chr2 (201-246)||(27980921-27980966)
chr2 (201-246)||(28067451-28067496)
chr2 (171-263)||(16313576-16313668)
chr2 (213-259)||(37094130-37094176)
chr2 (171-255)||(8034975-8035060)
chr2 (170-242)||(32551681-32551753)
[»] chr4 (64 HSPs)
chr4 (168-263)||(22847101-22847196)
chr4 (92-170)||(19148994-19149072)
chr4 (170-263)||(24896984-24897077)
chr4 (169-265)||(40430120-40430216)
chr4 (172-263)||(34159011-34159102)
chr4 (170-263)||(11682207-11682300)
chr4 (170-263)||(11690486-11690579)
chr4 (171-263)||(24034518-24034610)
chr4 (171-263)||(35339650-35339742)
chr4 (166-256)||(43458404-43458494)
chr4 (167-257)||(51322646-51322735)
chr4 (174-263)||(8713227-8713315)
chr4 (170-263)||(41202351-41202444)
chr4 (170-262)||(1522782-1522874)
chr4 (171-263)||(22301751-22301842)
chr4 (171-255)||(43621588-43621672)
chr4 (170-262)||(48990344-48990436)
chr4 (171-263)||(50602034-50602126)
chr4 (171-262)||(28803975-28804066)
chr4 (173-263)||(32135358-32135447)
chr4 (168-262)||(50561561-50561654)
chr4 (170-259)||(19874132-19874221)
chr4 (170-259)||(42348659-42348748)
chr4 (171-263)||(3026381-3026473)
chr4 (165-265)||(32932578-32932678)
chr4 (171-263)||(37683268-37683359)
chr4 (171-259)||(52307467-52307555)
chr4 (180-263)||(49331-49414)
chr4 (172-263)||(30217129-30217220)
chr4 (169-263)||(48349490-48349584)
chr4 (171-265)||(51322393-51322487)
chr4 (170-259)||(55215603-55215692)
chr4 (171-259)||(20434162-20434250)
chr4 (171-263)||(47467413-47467505)
chr4 (168-263)||(20293301-20293396)
chr4 (168-259)||(43830227-43830318)
chr4 (168-263)||(50469060-50469155)
chr4 (168-259)||(55219864-55219955)
chr4 (171-257)||(13962490-13962575)
chr4 (168-246)||(31709712-31709790)
chr4 (170-259)||(23895205-23895294)
chr4 (170-259)||(38291865-38291954)
chr4 (170-259)||(39540411-39540500)
chr4 (170-259)||(52913203-52913292)
chr4 (171-259)||(37234215-37234303)
chr4 (171-259)||(42724191-42724279)
chr4 (170-258)||(53875121-53875209)
chr4 (168-255)||(56362815-56362902)
chr4 (168-246)||(3019679-3019757)
chr4 (171-257)||(10542044-10542130)
chr4 (171-256)||(28406451-28406536)
chr4 (168-257)||(52839744-52839833)
chr4 (171-259)||(613823-613911)
chr4 (175-262)||(7318431-7318519)
chr4 (170-253)||(53036031-53036114)
chr4 (170-255)||(37828752-37828836)
chr4 (170-246)||(20737689-20737765)
chr4 (167-259)||(25857537-25857628)
chr4 (171-259)||(55183537-55183625)
chr4 (224-263)||(36851458-36851497)
chr4 (167-246)||(56018716-56018795)
chr4 (43-73)||(19148952-19148982)
chr4 (170-255)||(47429844-47429928)
chr4 (212-248)||(7817814-7817850)
[»] chr6 (22 HSPs)
chr6 (168-263)||(23350351-23350446)
chr6 (170-263)||(6925776-6925869)
chr6 (172-263)||(34085836-34085927)
chr6 (170-259)||(6625357-6625446)
chr6 (170-263)||(18024378-18024471)
chr6 (168-256)||(11369079-11369167)
chr6 (182-262)||(29623165-29623245)
chr6 (172-263)||(32173702-32173794)
chr6 (174-263)||(5714880-5714969)
chr6 (171-263)||(8525525-8525617)
chr6 (170-250)||(31091150-31091230)
chr6 (171-257)||(18893675-18893761)
chr6 (171-257)||(25335136-25335222)
chr6 (174-263)||(7080975-7081064)
chr6 (171-259)||(6167932-6168020)
chr6 (167-257)||(3094584-3094674)
chr6 (174-263)||(8811295-8811384)
chr6 (170-259)||(13889954-13890043)
chr6 (168-257)||(29630494-29630583)
chr6 (171-259)||(7141263-7141351)
chr6 (170-259)||(29122350-29122441)
chr6 (194-255)||(13445402-13445463)
[»] scaffold0578 (1 HSPs)
scaffold0578 (172-263)||(8719-8810)
[»] scaffold0368 (1 HSPs)
scaffold0368 (170-259)||(13861-13950)
[»] scaffold0003 (1 HSPs)
scaffold0003 (171-263)||(365843-365935)
[»] scaffold0438 (1 HSPs)
scaffold0438 (168-258)||(2112-2202)
[»] scaffold0896 (1 HSPs)
scaffold0896 (174-263)||(3742-3831)
[»] scaffold0391 (1 HSPs)
scaffold0391 (170-259)||(3874-3963)
[»] scaffold0276 (2 HSPs)
scaffold0276 (171-259)||(12520-12608)
scaffold0276 (170-259)||(14045-14134)
[»] scaffold0007 (2 HSPs)
scaffold0007 (171-259)||(157111-157199)
scaffold0007 (171-255)||(200033-200117)
[»] scaffold0248 (1 HSPs)
scaffold0248 (170-257)||(3022-3109)
[»] scaffold0264 (1 HSPs)
scaffold0264 (214-263)||(13535-13584)


Alignment Details
Target: chr5 (Bit Score: 72; Significance: 8e-33; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 168 - 263
Target Start/End: Original strand, 40738889 - 40738984
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||||| ||||| |||||| |||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  40738889 ttagagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttc 40738984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 18864429 - 18864522
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||| ||||| |||||| |||| |||||||||||||||| ||||||||||||||||||||| |||||| ||||||    
T  18864429 agagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttaaaaaagactcttc 18864522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 43548668 - 43548576
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||||| ||||| |||||| ||||  ||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  43548668 gagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttc 43548576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 172 - 262
Target Start/End: Original strand, 10552506 - 10552596
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctctt 262  Q
    |||||||||||||||| |||| ||||| |||||| || ||||||||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  10552506 agtttttctaattacatcctgattaatcctggttgcatcttaaaatgacaaaattattcttccataaaatttaattttcaaaaagcatctt 10552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 172 - 262
Target Start/End: Complemental strand, 15272853 - 15272763
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctctt 262  Q
    ||||||||||||||||||||| ||||| |||||| ||| | |||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  15272853 agtttttctaattacaccctgtttaatcctggttgcacttcaaaatgtcaaaattatccttccataaaatttaattttcaaaaagcatctt 15272763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 4621146 - 4621238
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||| || ||||| |||||| || | |||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  4621146 agagtttttctaattacacc-tgtttaatcctggttgcatcctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttc 4621238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 36294180 - 36294273
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||| || |||||  ||||||||||  ||||||||||||||| |||| ||||||||||||||||||||| ||||||||    
T  36294180 agagtttttctaattacaccatgtttaatcatggttacaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaggcctcttc 36294273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 167 - 255
Target Start/End: Original strand, 8232539 - 8232627
Alignment:
Q  167 attagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    |||||||||||||||||||||| ||||||||| |||||| ||||  ||||||| || |||| |||||||||||||||||||||||||||    
T  8232539 attagagtttttctaattacactctgcttaatcctggttgcaccccaaaatgataagattaccctttcataaaatttaattttcaaaaa 8232627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 31484649 - 31484741
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||| |||| ||||| |||||| ||||  ||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  31484649 gagtttttctaattacagcctgtttaattctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttc 31484741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 31498837 - 31498929
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||||| ||||| || ||| |||  |||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  31498837 gagtttttctaattacaccctgtttaattcttgttgcactctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttc 31498929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 42437460 - 42437368
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||| ||| ||||| |||||| ||||  ||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  42437460 gagtttttctaattacactctgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttc 42437368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 263
Target Start/End: Original strand, 6245188 - 6245279
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||| ||||| |||||| |||  || |||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  6245188 agtttttctaattacaccctgtttaattctggttgcactctagaatgacaaaattacactttcataaaatttaattttcaaaaagactcttc 6245279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 261
Target Start/End: Complemental strand, 12189392 - 12189301
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctct 261  Q
    |||||||||||||||||||| || ||||| |||||||||||  ||||||| ||||||| |||| |||||||||||||||||||||| |||||    
T  12189392 agagtttttctaattacaccttgtttaatcctggttacaccccaaaatgataaaattacccttccataaaatttaattttcaaaaaacctct 12189301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 10666223 - 10666137
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    ||||||||| ||||||||||||| ||||| |||||| ||||  ||||||||||||||| |||| |||||||||||||||||||||||    
T  10666223 agagtttttataattacaccctgtttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaag 10666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 37340799 - 37340892
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||| ||||| ||| || || |  ||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  37340799 agagtttttctaattacaccctgtttaattctgattgcatcccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttc 37340892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 18978453 - 18978544
Alignment:
Q  174 tttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttctt 265  Q
    ||||||||||||||||||| ||||| |||||| ||||  ||||||||| ||||||||||  ||||||||||||||||||||||  |||||||    
T  18978453 tttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatccttctataaaatttaattttcaaaaagtatcttctt 18978544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 41882005 - 41881919
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    |||||||||||||||||||||| |||||  ||||| ||||  ||||||||||||||| | || ||||||||||||||||||||||||    
T  41882005 gagtttttctaattacaccctgtttaattttggttgcaccccaaaatgacaaaattacctttccataaaatttaattttcaaaaagc 41881919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 263
Target Start/End: Complemental strand, 13211067 - 13210982
Alignment:
Q  178 tctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||| |||||||||| ||||| |||||| |||||||||||||||||||||   || |||||||||||||||||||||||| |||||    
T  13211067 tctatttacaccctgtttaatcctggttgcaccttaaaatgacaaaattactgttccataaaatttaattttcaaaaagcatcttc 13210982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 37274697 - 37274608
Alignment:
Q  174 tttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||| | ||||| ||| || ||||  ||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  37274697 tttttctaattacacccagtttaatcctgcttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttc 37274608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 7338624 - 7338712
Alignment:
Q  175 ttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||| |||| ||| ||||| |||||| ||||  ||||||||||||||| | ||||||||||||||||||||||||||| |||||    
T  7338624 ttttctaatgacactctgtttaatcctggttgcaccccaaaatgacaaaattaccttttcataaaatttaattttcaaaaagcatcttc 7338712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 18522161 - 18522245
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    |||||||||||||||||||  |  ||||| |||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  18522161 agagtttttctaattacacatta-ttaatcctggttgcaccctaaaataacaaaattatccttccataaaatttaattttcaaaaa 18522245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 255
Target Start/End: Original strand, 37105851 - 37105934
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    |||||||||||||||||  || ||||| ||| || ||   |||||||||||||||| |||||||||||||||||||||||||||    
T  37105851 agtttttctaattacacaatgtttaatcctgattgcattctaaaatgacaaaattaccctttcataaaatttaattttcaaaaa 37105934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 4156260 - 4156166
Alignment:
Q  165 taattagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||| ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  4156260 taattggagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 4156166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 27308706 - 27308764
Alignment:
Q  204 ttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctctt 262  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  27308706 ttacaccctaaaatgataaaattatcttttcataaaatttaattttcagaaagcctctt 27308764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 37865917 - 37865963
Alignment:
Q  213 aaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  37865917 aaaatgacaaaattatcctttcataaaatttgattttcaaaaagcct 37865963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 9065698 - 9065786
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  9065698 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 9065786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 43293743 - 43293655
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||||||||| ||||||||| |||||||||||||||    
T  43293743 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatccttttataaaatttgattttcaaaaagcct 43293655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 31527665 - 31527575
Alignment:
Q  169 tagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||||| || ||||||  |||||  ||||| |||   |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  31527665 tagagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 31527575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 259
Target Start/End: Original strand, 33280807 - 33280897
Alignment:
Q  169 tagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||||| || ||||||  |||||  |||||  |||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  33280807 tagagtttttctacttgcaccctagttaatcatggttgtaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 33280897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 255
Target Start/End: Complemental strand, 13145966 - 13145882
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||    
T  13145966 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaa 13145882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 257
Target Start/End: Complemental strand, 43518379 - 43518291
Alignment:
Q  169 tagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    ||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| | || ||||||||||||||| |||||||||||||    
T  43518379 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagagtaccctttcataaaatttgattttcaaaaagc 43518291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 19034807 - 19034720
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    |||||||||||| || |||| |  |||||  ||||| ||||  ||||| |||| |||||||||||||||||||| |||||||||||||    
T  19034807 agagtttttctacttgcaccttagttaatcatggttgcaccccaaaataacaagattatcctttcataaaatttgattttcaaaaagc 19034720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 24559067 - 24559153
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    |||||||||||| || ||||||  ||| |  ||||| ||||  |||||||||| |||| ||||||||||||||| ||||||||||||    
T  24559067 agagtttttctacttgcaccctagttagtcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaag 24559153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 24600099 - 24600185
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    |||||||||||| || ||||||  ||| |  ||||| ||||  |||||||||| |||| ||||||||||||||| ||||||||||||    
T  24600099 agagtttttctacttgcaccctagttagtcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaag 24600185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 25084853 - 25084931
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    |||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||||||    
T  25084853 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 25084931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 25142826 - 25142904
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    |||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||||||    
T  25142826 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 25142904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 6470022 - 6469944
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    |||||||||||||| || |||| |  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||||||    
T  6470022 ttagagtttttctacttgcaccttagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 6469944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 35319810 - 35319774
Alignment:
Q  219 acaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    |||||||||| |||||||||||||| |||||||||||    
T  35319810 acaaaattattctttcataaaatttgattttcaaaaa 35319774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 24980854 - 24980947
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||| ||||| |||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  24980854 agagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttc 24980947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 45870254 - 45870161
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||| || ||||| |||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  45870254 agagtttttctaattacaccatgtttaattctggttgcacctcaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttc 45870161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 40862358 - 40862451
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||| | |||| ||||| ||| || |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40862358 agagtttttctaattatatcctgtttaatcctgattgcaccctaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcatcttc 40862451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 262
Target Start/End: Original strand, 48612861 - 48612952
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctctt 262  Q
    ||||||||||||||| || ||| ||||| |||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||| ||||    
T  48612861 gagtttttctaattagactctgtttaattctggttacaccttaaaatgataaaattatccttccataaaatttaatttttaaaaagcatctt 48612952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 39597955 - 39597861
Alignment:
Q  169 tagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||| ||||||||| ||||||||| ||||| |||||| ||||  ||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  39597955 tagaatttttctaaatacaccctgtttaatcctggttgcaccccaaaatgacaaaattatcctgtcataaaatttaattttcaaaaagcatcttc 39597861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 43775882 - 43775975
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||| |||  ||||| |||||| ||||  ||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  43775882 agagtttttctaattacatcctatttaatcctggttgcaccccaaaatgataaaattatcctttcataaaatttaattttcaaaaagcatcttc 43775975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 46101804 - 46101896
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||| ||||||||||||||||||| ||| || ||| ||||||||||||||||||| ||  ||||||||||||||||||||||| |||||    
T  46101804 gagtttttttaattacaccctgcttaatcctgattgcactttaaaatgacaaaattatctttctataaaatttaattttcaaaaagcatcttc 46101896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 47540290 - 47540382
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||||| ||||| ||| |||||| | ||||||| ||||||||| || |||||||||||||||||||||||| |||||    
T  47540290 gagtttttctaattacaccctgtttaattctgattacacttaaaaatgataaaattatcattccataaaatttaattttcaaaaagcatcttc 47540382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 47546847 - 47546939
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||||| ||||| ||| |||||| | ||||||| ||||||||| || |||||||||||||||||||||||| |||||    
T  47546847 gagtttttctaattacaccctgtttaattctgattacacttaaaaatgataaaattatcattccataaaatttaattttcaaaaagcatcttc 47546939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 254
Target Start/End: Complemental strand, 40305557 - 40305474
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaa 254  Q
    ||||||||||||||||| |||| ||||| |||||| ||||| ||||||||||||||| ||||||| ||||||||||||||||||    
T  40305557 gagtttttctaattacatcctgtttaattctggttgcacctaaaaatgacaaaattaccctttcaaaaaatttaattttcaaaa 40305474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 29042142 - 29042235
Alignment:
Q  169 tagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||| || ||||| || ||| ||||| |||||||||||||||||||||||||||| ||||||||||| |||| |||||    
T  29042142 tagagtttttctaattacaccttgtttaatcctagttgcacctcaaaatgacaaaattatcctttcataaaa-ttaattttcaacaagcatcttc 29042235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 254
Target Start/End: Original strand, 20492683 - 20492767
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaa 254  Q
    ||||||||| ||||||||||||| ||||| |||||| ||||  ||||||||||||||| |||| |||||||||||||||||||||    
T  20492683 agagtttttataattacaccctgattaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaa 20492767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 263
Target Start/End: Original strand, 10594081 - 10594176
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||  ||||| ||| ||||| |||| |||||||||||||||| ||||||| |||||    
T  10594081 ttagagtttttctaattacaccctgtttaatcctggttgcaccccaaaataacagaattaaccttccataaaatttaatttttaaaaagcatcttc 10594176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 12847258 - 12847167
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctctt 262  Q
    |||||||||||||||||||||| ||||| |||||| |||   ||||||| ||||||| |||| |||||||||||||||||||||||| ||||    
T  12847258 gagtttttctaattacaccctgtttaatcctggttgcactccaaaatgataaaattacccttccataaaatttaattttcaaaaagcatctt 12847167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 34591675 - 34591764
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||| |||||||||| |||||||||||||||||||| |||||||||||||||    
T  34591675 agagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattatcctttcataaaatttgattttcaaaaagcct 34591764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 36688820 - 36688728
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||  ||||| || ||| || || |||||||||||||||||||| ||||||| |||||||||||||||| |||||    
T  36688820 agagtttttctaattacaccctctttaatccttgttgcatctcaaaatgacaaaattatccttccataaaa-ttaattttcaaaaagcatcttc 36688728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 44709980 - 44709888
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||| |||||  ||||| ||||||  | | |||||||| ||||||||||||| ||||||||||||||||||||||| |||||    
T  44709980 gagtttttctaattataccctatttaatcctggttgtatcataaaatgataaaattatccttttataaaatttaattttcaaaaagcatcttc 44709888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 25764873 - 25764948
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaa 245  Q
    |||||||||||||||||||| ||  |||| |||||||||||| ||||||||||||||| |||| ||||||||||||    
T  25764873 agagtttttctaattacaccatgtataatcctggttacacctcaaaatgacaaaattacccttgcataaaatttaa 25764948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 241680 - 241773
Alignment:
Q  169 tagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||| ||||||||||||||||||| |||||  || || ||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |||||    
T  241680 tagaatttttctaattacaccctgtttaatcatgcttgcaccttaaaatgataaaattacccttccataaaa-ttaattttcaaaaagcatcttc 241773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 19473935 - 19474020
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaa 254  Q
    |||||||||||||||| |||||||| |||||  || ||||||  |||||||||||| ||||||||||||||||||||||||| ||||    
T  19473935 ttagagtttttctaatcacaccctgtttaattttgattacactctaaaatgacaaa-ttatcctttcataaaatttaattttaaaaa 19474020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 47066020 - 47065932
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || |||||| ||||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  47066020 gagtttttctacttgcaccctacttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 47065932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 21279150 - 21279063
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||||||||||||||||||| |||||||||||||    
T  21279150 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagc 21279063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 25066643 - 25066568
Alignment:
Q  174 tttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaatttt 249  Q
    |||||||| |||||||||  ||||| || |||||||| ||||||||||||||||||||||  ||||||||||||||    
T  25066643 tttttctagttacaccctatttaattcttgttacaccctaaaatgacaaaattatcctttagtaaaatttaatttt 25066568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 12428598 - 12428683
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    |||||||||||||||||||  |  ||||| |||||| ||  |||||||||||||||||||||| ||| |||||||||||| |||||    
T  12428598 agagtttttctaattacactttttttaatcctggttgcattttaaaatgacaaaattatccttccatcaaatttaatttttaaaaa 12428683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 26015947 - 26015858
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  26015947 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 26015858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 35924228 - 35924317
Alignment:
Q  169 tagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcc 258  Q
    ||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| ||||||||||||||    
T  35924228 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcc 35924317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 38876135 - 38876046
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  38876135 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 38876046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 43247038 - 43246949
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  43247038 agagtttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 43246949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 263
Target Start/End: Complemental strand, 7883763 - 7883668
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttaca-ccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||| | || ||||| |||||| || ||  ||||||| ||||||| |||||||||||| |||||||||||||||| |||||    
T  7883763 ttagagtttttctaattacatcatgtttaatcctggttgcacccccaaaatgaaaaaattaccctttcataaaa-ttaattttcaaaaagcatcttc 7883668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 32542263 - 32542175
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  32542263 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 32542175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 42436588 - 42436496
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||| |||||| |||||| ||||| |||| | ||||  |||||||||| |||| |||| ||||||||||| |||||||||||| |||||    
T  42436588 gagtttttataattataccctgtttaatcctggctgcaccccaaaatgacaagattacccttccataaaatttagttttcaaaaagcatcttc 42436496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 46322126 - 46322038
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  46322126 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 46322038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 46923875 - 46923966
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||||| || |||| |  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  46923875 ttagagtttttctacttgcaccatagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 46923966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 25225516 - 25225602
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    ||||||||||| |||| || ||| |||||  ||||| ||| |||||||||||| |||||| ||  ||||||||||||||||||||||    
T  25225516 agagtttttcttattatacgctgtttaatcttggttgcactttaaaatgacaatattatctttctataaaatttaattttcaaaaag 25225602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 38283671 - 38283585
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||    
T  38283671 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagc 38283585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 43047169 - 43047091
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    |||||||||||||| || ||||||  |||||  ||||| |||| ||||||||||| |||| ||||||||||||||||||    
T  43047169 ttagagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttaat 43047091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 39598615 - 39598531
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    |||||||||||||||||||||| ||||| ||||||  || ||||||||| ||| ||| | || ||||||| |||||||||||||||    
T  39598615 gagtttttctaattacaccctgtttaattctggttgtactttaaaatgataaatttacctttccataaaa-ttaattttcaaaaag 39598531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 7790903 - 7790991
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||| ||||    
T  7790903 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaatgcct 7790991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 39074437 - 39074361
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    |||||||||||| || ||||||  |||||  ||||| |||| ||||||||||| |||| ||||||||||||||||||    
T  39074437 agagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttaat 39074361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 40705592 - 40705504
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||  ||||||||||||||| |||||||||||||||    
T  40705592 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattgccctttcataaaatttgattttcaaaaagcct 40705504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 7900475 - 7900521
Alignment:
Q  213 aaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  7900475 aaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 7900521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 257
Target Start/End: Original strand, 25876776 - 25876862
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||| ||||||||| |||||||||||||    
T  25876776 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattacccttttataaaatttgattttcaaaaagc 25876862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 27324997 - 27325043
Alignment:
Q  213 aaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||| || |||||||||||||||||||| |||||||||||||||    
T  27324997 aaaatgataagattatcctttcataaaatttgattttcaaaaagcct 27325043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 30173547 - 30173462
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttc-ataaaatttaattttcaaaaa 255  Q
    |||||||||||||||| |||||  |||||  ||||| ||  | ||||||||||||||| |||||| |||||||||||||||||||||    
T  30173547 agagtttttctaattataccctatttaatcttggttgcatttcaaaatgacaaaatta-cctttctataaaatttaattttcaaaaa 30173462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 32662449 - 32662363
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| | ||||||||||||| ||||||||||||    
T  32662449 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccttttcataaaatttgattttcaaaaag 32662363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 257
Target Start/End: Original strand, 40995184 - 40995273
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    |||||||||||||| || ||||||  |||||  ||||| ||||  ||||||| || |||| ||||||||||||||| ||| |||||||||    
T  40995184 ttagagtttttctacttgcaccctanttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattatcaaaaagc 40995273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 47779589 - 47779503
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    ||||||||||| || || |||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||    
T  47779589 gagtttttctacttgcatcctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 47779503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 21874712 - 21874636
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    |||||||||||| || || |||  |||||  ||||| |||| ||||||||||| ||||| |||||||||||||||||    
T  21874712 agagtttttctacttgcatcctagttaatcatggttgcaccctaaaatgacaagattattctttcataaaatttaat 21874636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 42095854 - 42095779
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||||||    
T  42095854 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 42095779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 48874426 - 48874375
Alignment:
Q  212 taaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||| ||||||||||| ||  ||||||||||||||||||||||| |||||    
T  48874426 taaaataacaaaattatctttctataaaatttaattttcaaaaagcatcttc 48874375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 255
Target Start/End: Complemental strand, 8203479 - 8203437
Alignment:
Q  213 aaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    |||||||||| |||| ||||||||||||||| |||||||||||    
T  8203479 aaaatgacaagattaccctttcataaaatttgattttcaaaaa 8203437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 255
Target Start/End: Complemental strand, 8215956 - 8215914
Alignment:
Q  213 aaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    |||||||||| |||| ||||||||||||||| |||||||||||    
T  8215956 aaaatgacaagattaccctttcataaaatttgattttcaaaaa 8215914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 40994893 - 40994808
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    ||||||||||| ||| || ||  |||||  ||||| |||| |||||| || | |||||||||| ||||||||| ||||||||||||    
T  40994893 gagtttttctacttaaactctagttaatcatggttgcaccataaaataacgagattatccttttataaaatttgattttcaaaaag 40994808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 19021090 - 19021050
Alignment:
Q  223 aattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||| ||||||||||||||| |||||||||||| ||||||    
T  19021090 aattaccctttcataaaatttgattttcaaaaagtctcttc 19021050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 26307845 - 26307938
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||| |||||  ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  26307845 agagtttttctaattacaccctgtttaatcttggttgcaccttaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttc 26307938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 29922309 - 29922217
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||||| ||||| |||||| |||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  29922309 gagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttc 29922217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 40498616 - 40498709
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||| ||||| |||||| ||||  ||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  40498616 agagtttttctaattacaccctgtttaattctggttgcaccccaaaatgacaaaattaccctttcataaaatttaattttcaaaaagcatcttc 40498709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 51002117 - 51002024
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||| |||||| ||||| ||| || |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  51002117 agagtttttctaattataccctgtttaatcctgattgcaccctaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcatcttc 51002024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 8114991 - 8114895
Alignment:
Q  169 tagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttctt 265  Q
    |||||||||| ||||||||| ||| ||||| |||||| |||| ||||||||||||||||||||| || ||||||||||||||||||||| |||||||    
T  8114991 tagagtttttttaattacacactgtttaatcctggttgcaccctaaaatgacaaaattatccttccagaaaatttaattttcaaaaagcatcttctt 8114895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 7009007 - 7009099
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||| |||||||| ||||| |||||||||||  ||||| ||||||||| ||||||||||||||||||||| |||||||||||||    
T  7009007 agagtttttctaatcacaccctgtttaatcctggttacaccccaaaataacaaaattaccctttcataaaatttaatttt-aaaaagcctcttc 7009099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 17605726 - 17605819
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||||||  |||| |||||| |||| |||||||||||||||| | || |||||||||||||||||||||||| |||||    
T  17605726 agagtttttctaattacaccctgtgtaatcctggttgcaccctaaaatgacaaaattacctttccataaaatttaattttcaaaaagcatcttc 17605819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 41712763 - 41712852
Alignment:
Q  174 tttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||| ||||| |||||| ||||  ||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  41712763 tttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttc 41712852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 172 - 256
Target Start/End: Original strand, 17474665 - 17474749
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    |||||||||||||||| |||  ||||| |||||| || | |||||||||||||||||||||||||||||||||||||||||||||    
T  17474665 agtttttctaattacatcctctttaatcctggttgcatcctaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 17474749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 265
Target Start/End: Complemental strand, 9640977 - 9640882
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttctt 265  Q
    ||||||||||||||||||||||  | ||| |||||| || | |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  9640977 agagtttttctaattacacccttttcaatcctggttgcatcctaaaatgacaaaattacccttttataaaatttaattttcaaaaagcatcttctt 9640882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 19514220 - 19514129
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||| ||||| |||||| || |||||||| |||||||||  ||| |||||||||||||||||||||||| |||||    
T  19514220 agtttttctaattacaccctgtttaatcctggttgcatcttaaaataacaaaattactcttccataaaatttaattttcaaaaagcatcttc 19514129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 263
Target Start/End: Original strand, 51776026 - 51776121
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||||| ||||| |||||| || |  ||||||||||||||| |||| |||||||||||||||| ||||||| |||||    
T  51776026 ttagagtttttctaattacaccctgtttaatcctggttgcatcccaaaatgacaaaattacccttccataaaatttaatttttaaaaagcatcttc 51776121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 3485814 - 3485908
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcat-aaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||| ||||||||||||| |||||  ||||||||| | ||||| ||||||||||||||| || |||||||||||||||||||||||||||    
T  3485814 agagtttttttaattacaccctgtttaatcttggttacacttcaaaataacaaaattatccttttataaaaatttaattttcaaaaagcctcttc 3485908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 32086481 - 32086574
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||| ||||| ||| || ||||  ||||||||| |||||||||| ||||||||||||||||||||| || |||||    
T  32086481 agagtttttctaattacaccctgtttaatcctgattgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaggcatcttc 32086574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 12601854 - 12601945
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||||| ||||| |||||| || |  |||||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  12601854 gagtttttctaattacaccctgtttaattctggttgcatcc-aaaatgacaaaattattcttccataaaatttaattttcaaaaagcatcttc 12601945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 13146022 - 13146113
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||||| ||||| |||||| |||| ||||||||||||||||  ||| ||||||| |||||||||||||||| |||||    
T  13146022 gagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattactcttccataaaa-ttaattttcaaaaagcatcttc 13146113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 35273826 - 35273918
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||| ||| || ||||| |||||| || | |||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  35273826 gagtttttctaattaaaccttgtttaatcctggttgcatcctaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttc 35273918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 265
Target Start/End: Complemental strand, 6016698 - 6016604
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttctt 265  Q
    |||||||||||||||||||||| ||||| |||||| ||  ||||||||||||||||||| ||  ||||||||||||||| ||||| | |||||||    
T  6016698 gagtttttctaattacaccctgtttaatcctggttgcattttaaaatgacaaaattatcattctataaaatttaatttttaaaaaacatcttctt 6016604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 259
Target Start/End: Original strand, 13942138 - 13942231
Alignment:
Q  166 aattagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||||||||||||||||||| |||||||||||||||    
T  13942138 aattagagtttttctacttgcaccctatttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcct 13942231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 14290355 - 14290287
Alignment:
Q  194 ttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctctt 262  Q
    ||||| |||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  14290355 ttaatcctggttgcaccttaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatctt 14290287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 263
Target Start/End: Original strand, 5672891 - 5672983
Alignment:
Q  167 attagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||| ||||||||||||||||||||    ||| |||||| || | |||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  5672891 attaaagtttttctaattacaccct----aatcctggttgcatcctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttc 5672983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 23444424 - 23444345
Alignment:
Q  175 ttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaa 254  Q
    |||||||||||||||||  |||||  ||||| ||||  | ||||||||||||||||||||||||||||||||||||||||    
T  23444424 ttttctaattacaccctatttaatcttggttgcaccccacaatgacaaaattatcctttcataaaatttaattttcaaaa 23444345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 259
Target Start/End: Original strand, 50727795 - 50727885
Alignment:
Q  169 tagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||||||||||||||||||| |||||||||||||||    
T  50727795 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcct 50727885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 15932785 - 15932874
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||||||||||||||||||| |||||||||||||||    
T  15932785 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcct 15932874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 42948188 - 42948277
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| |||| ||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  42948188 agagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 42948277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 259
Target Start/End: Original strand, 24317177 - 24317269
Alignment:
Q  167 attagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  24317177 attagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 24317269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 34270857 - 34270769
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||||||||||||||||||| |||||||||||||||    
T  34270857 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcct 34270769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 33010876 - 33010782
Alignment:
Q  165 taattagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||| |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  33010876 taataagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 33010782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 19247859 - 19247770
Alignment:
Q  174 tttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||| | || ||||| |||||| || | |||||||| ||||||| |||| |||||||||| ||||||||||||| |||||    
T  19247859 tttttctaattacatcttgtttaatcctggttgcatcctaaaatgataaaattacccttccataaaattttattttcaaaaagcatcttc 19247770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 28853004 - 28852915
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || || |||  |||||  ||||| |||| ||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  28853004 agagtttttctacttgcatcctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 28852915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 32561263 - 32561347
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    |||||||||||||||||||| || ||||| |||||| ||||| ||||||||||||||| ||||  |||||| ||||||||| ||||    
T  32561263 agagtttttctaattacaccatgattaatcctggttgcacctaaaaatgacaaaattacccttctataaaa-ttaattttcgaaaa 32561347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 48933214 - 48933298
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    ||||||||||||||||||||||| |||||  ||||| ||||| ||||||| ||||||| |||| ||||||| ||||||||| ||||    
T  48933214 agagtttttctaattacaccctgattaatcatggttgcacctcaaaatgataaaattacccttccataaaa-ttaattttcgaaaa 48933298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 2482716 - 2482628
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  2482716 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcct 2482628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 39569539 - 39569451
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  39569539 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 39569451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 259
Target Start/End: Complemental strand, 52044477 - 52044385
Alignment:
Q  167 attagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||||||| || ||||||  |||||  ||||| ||||  ||||||| || |||| ||||||||||||||| |||||||||||||||    
T  52044477 attagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagcct 52044385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 20581504 - 20581587
Alignment:
Q  176 tttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||| || ||||||  |||||  ||||| ||||  ||||||||||||||| ||||||||||||||| |||||||||||||||    
T  20581504 tttctacttgcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcct 20581587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 26151250 - 26151163
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  ||||||| || |||||||||||||||||||| |||||||||||||    
T  26151250 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattatcctttcataaaatttgattttcaaaaagc 26151163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 35841484 - 35841543
Alignment:
Q  203 gttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctctt 262  Q
    |||||| || ||||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  35841484 gttacatctcaaaataacaaaattatccttccataaaatttaattttcaaaaagtctctt 35841543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 49823201 - 49823292
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||| ||||||||| |||||||||||||||    
T  49823201 ttagagtttttctacttgcaccctaattaatcatggttgcaccccaaaatgacaagattacccttttataaaatttgattttcaaaaagcct 49823292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 52024722 - 52024813
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||  |||| ||||||||||||||| |||||||||||||||    
T  52024722 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaggattaccctttcataaaatttgattttcaaaaagcct 52024813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 265
Target Start/End: Original strand, 18909215 - 18909309
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttctt 265  Q
    ||||||||||| |||||||||  |||||  ||||| ||    |||||||||| |||| ||||||||||||||| ||||||||||||||| |||||    
T  18909215 gagtttttctacttacaccctagttaatcatggttgcattccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcctattctt 18909309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 257
Target Start/End: Original strand, 40400033 - 40400119
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||    
T  40400033 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagc 40400119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 253
Target Start/End: Complemental strand, 13240306 - 13240221
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaa 253  Q
    |||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||    
T  13240306 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaa 13240221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 40536874 - 40536797
Alignment:
Q  169 tagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    ||||||||||||| || ||||||  |||||  ||||| ||||| |||||||||| |||| ||||||||||||||||||    
T  40536874 tagagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattaccctttcataaaatttaat 40536797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 6653224 - 6653312
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| | |||||||||||||    
T  6653224 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgactttcaaaaagcct 6653312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 44721871 - 44721959
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  ||||||| || |||| ||||||||||||||| |||||||||||||||    
T  44721871 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagcct 44721959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 46291907 - 46291815
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||  |  ||||| |||||| || ||||||||||||||||||    | |||||||||||||||| ||||||| |||||    
T  46291907 gagtttttctaattacacattatttaatcctggttgcatcttaaaatgacaaaattacttatccataaaatttaatttttaaaaagcatcttc 46291815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 263
Target Start/End: Complemental strand, 24527723 - 24527629
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||| |||||||| ||||| ||| || ||    |||||| |||||||| | ||||||||||||||||||| ||||||| |||||    
T  24527723 ttagagtttttctaatcacaccctgtttaatcctgattgcattccaaaatgccaaaattaccatttcataaaatttaatttt-aaaaagcatcttc 24527629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 51677291 - 51677244
Alignment:
Q  212 taaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| |||||||||||||||||||| |||| ||||||||||    
T  51677291 taaaatgacaagattatcctttcataaaatttgatttacaaaaagcct 51677244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 51290546 - 51290624
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    |||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||||||    
T  51290546 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 51290624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 255
Target Start/End: Complemental strand, 2138329 - 2138245
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    ||||||||||| || ||| ||  |||||  ||||| ||||| ||||||| || |||| ||||||||||||||| |||||||||||    
T  2138329 gagtttttctacttgcactctagttaatcatggttgcacctcaaaatgataagattaccctttcataaaatttgattttcaaaaa 2138245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 11173584 - 11173509
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||||||    
T  11173584 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 11173509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 14247535 - 14247456
Alignment:
Q  165 taattagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaattta 244  Q
    |||| |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||||    
T  14247535 taataagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattta 14247456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 39982263 - 39982338
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||||||    
T  39982263 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 39982338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 5347560 - 5347469
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||    
T  5347560 agtttttctaattacatcctgtttaatcctggttacaccttaaaatgataaaattaccctttcataaaatttaagtttcaaaaagcctcttc 5347469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 4005764 - 4005857
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||| ||||| ||||||  | |||||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  4005764 agagtttttctaattacaccctgtttaatcctggttgtatcttaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttc 4005857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 36057817 - 36057724
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||| ||||| |||||| ||||  ||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  36057817 agagtttttctaattacaccctgtttaattctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttc 36057724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 31793933 - 31793841
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||||| ||||| |||||| ||||  ||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  31793933 gagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttc 31793841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 170 - 262
Target Start/End: Complemental strand, 41942446 - 41942354
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctctt 262  Q
    ||||||||||||||||||||||| ||||| |||||| || |  |||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  41942446 agagtttttctaattacaccctgtttaatcctggttgcatcccaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatctt 41942354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 257
Target Start/End: Original strand, 38945688 - 38945774
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    ||||||||||||||||||  || ||||| |||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  38945688 gagtttttctaattacacaatgtttaatcctggttgcaccctaaaatgacaaaattatccttccataaaatttaattttcaaaaagc 38945774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 12722559 - 12722648
Alignment:
Q  174 tttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||| ||||| |||||| ||||  ||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  12722559 tttttctaattacaccctgtttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttc 12722648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 35605334 - 35605425
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||||| |||||||||  |||||  ||||| ||||| |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  35605334 ttagagtttttctacttacaccctagttaatcatggttgcacctcaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 35605425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 262
Target Start/End: Original strand, 38234414 - 38234508
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctctt 262  Q
    ||||||||||||||||||||||||  ||||| ||| || ||| | ||||||||||||| |||||| |||||||||||||||| ||||||| ||||    
T  38234414 ttagagtttttctaattacaccctatttaatcctgtttgcacttcaaaatgacaaaatgatccttccataaaatttaatttttaaaaagcatctt 38234508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 38460187 - 38460094
Alignment:
Q  169 tagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||||||| ||||| |||||| ||||| ||||||||||||||| ||||  |||||| ||||||||| |||||| |||||    
T  38460187 tagagtttttctaattacaccctgattaatcctggttgcacctcaaaatgacaaaattacccttctataaaa-ttaattttcgaaaagcatcttc 38460094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 2828399 - 2828303
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttcttc 266  Q
    |||||||||||||||||||||||  |||| || ||||||| ||| |||||||||||||   |  |||| ||||||||||||||||||||||||||||    
T  2828399 agagtttttctaattacaccctgtataatcctagttacactttagaatgacaaaattactttggcatagaatttaattttcaaaaagcctcttcttc 2828303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 262
Target Start/End: Complemental strand, 35329811 - 35329720
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctctt 262  Q
    |||||||||||||||||||| || ||||| |||||| |||   |||||||||||||||||||| ||||||| |||||||||||||||| ||||    
T  35329811 agagtttttctaattacaccatgtttaatcctggttgcactccaaaatgacaaaattatccttccataaaa-ttaattttcaaaaagcatctt 35329720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 42688025 - 42687933
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||| ||| |||||  ||||| ||||  ||||||||||||||| |||| |||||||||||||||| ||||||| |||||    
T  42688025 gagtttttctaattacactctgtttaatcttggttgcaccccaaaatgacaaaattacccttccataaaatttaatttttaaaaagcatcttc 42687933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 255
Target Start/End: Original strand, 4229637 - 4229720
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    |||||||||||||||| |||| ||||| |||||| ||  | ||||||||| |||||||||| ||||||||||||||||||||||    
T  4229637 agtttttctaattacatcctgtttaatcctggttgcatttcaaaatgacagaattatccttccataaaatttaattttcaaaaa 4229720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 22439690 - 22439601
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || || |||  |||||  ||||||||||| |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  22439690 agagtttttctacttgcatcctagttaatcatggttacacctcaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 22439601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 43664408 - 43664320
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||| |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  43664408 gagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 43664320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 259
Target Start/End: Complemental strand, 34565115 - 34565024
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||||||||| ||||||||| |||||||||||||||    
T  34565115 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatccttttataaaatttgattttcaaaaagcct 34565024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 26290865 - 26290775
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcc 258  Q
    |||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| ||||||||||||||    
T  26290865 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcc 26290775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 26304122 - 26304032
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcc 258  Q
    |||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| ||||||||||||||    
T  26304122 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcc 26304032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 26337477 - 26337387
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcc 258  Q
    |||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| ||||||||||||||    
T  26337477 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcc 26337387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 263
Target Start/End: Original strand, 39712691 - 39712768
Alignment:
Q  185 acaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||| ||| ||||| ||||||||| | |||||||| ||||||||| ||||||||||||||||||| |||||||||||||    
T  39712691 acactctgtttaatcctggttacatcctaaaatgataaaattatcttttcataaaatttaatttt-aaaaagcctcttc 39712768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 5550 - 5595
Alignment:
Q  211 ttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  5550 ttaaaatgacaaaattatccttccataaaatttaattttcaaaaag 5595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 24822807 - 24822719
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  24822807 gagtttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 24822719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 257
Target Start/End: Original strand, 5988188 - 5988274
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||    
T  5988188 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagc 5988274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 259
Target Start/End: Original strand, 39365248 - 39365334
Alignment:
Q  173 gtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  39365248 gtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 39365334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 3032982 - 3032893
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| |||||||||| |||| |||||||||||||||    
T  3032982 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataacatttgattttcaaaaagcct 3032893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 17122089 - 17122178
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  ||||| |||| |||| ||||||||||||||| |||||||||||||||    
T  17122089 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaataacaagattaccctttcataaaatttgattttcaaaaagcct 17122178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 7970114 - 7970034
Alignment:
Q  174 tttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaa 254  Q
    ||||||||||||||||||   || | ||| ||||||| |||||||||||||||| | |||||||||||||| |||| ||||    
T  7970114 tttttctaattacaccctttatatttctgattacaccctaaaatgacaaaattaccttttcataaaatttatttttaaaaa 7970034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 23357340 - 23357252
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| | ||||||||||||| |||||||||||||||    
T  23357340 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccttttcataaaatttgattttcaaaaagcct 23357252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 3137309 - 3137222
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    |||||||||||| || |||| |  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||    
T  3137309 agagtttttctacttgcaccgtagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 3137222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 8656552 - 8656639
Alignment:
Q  169 tagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    ||||||||||||| || ||||||  |||||  ||||| || |  |||||||||| |||| ||||||||||||||| ||||||||||||    
T  8656552 tagagtttttctacttgcaccctagttaatcatggttgcaaccaaaaatgacaagattaacctttcataaaatttgattttcaaaaag 8656639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 263
Target Start/End: Original strand, 11266134 - 11266225
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||| |||||||||  || ||||| |||||| ||||| ||||||| || ||||  |||  ||||||||||||||||||||||| |||||    
T  11266134 agtttttttaattacactttgtttaatcctggttgcacctcaaaatgataagattactcttctataaaatttaattttcaaaaagcatcttc 11266225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 26122610 - 26122523
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  ||||||| || |||| ||||||||||||||| |||||||||||||    
T  26122610 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagc 26122523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 28909658 - 28909737
Alignment:
Q  167 attagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    ||||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||||||    
T  28909658 attagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 28909737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 8376243 - 8376325
Alignment:
Q  174 tttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    |||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| ||||||||||||    
T  8376243 tttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaag 8376325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 42512201 - 42512247
Alignment:
Q  213 aaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  42512201 aaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 42512247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 17601332 - 17601409
Alignment:
Q  169 tagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    |||||||||||||||| |||| |  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||||||    
T  17601332 tagagtttttctaattgcaccttagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 17601409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 11587897 - 11587973
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||||||    
T  11587897 agagtttttctacttgcaccctaattaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 11587973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 26992370 - 26992318
Alignment:
Q  201 tggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaa 253  Q
    ||||||||||| ||||||||||||||  ||||  |||||||||||||||||||    
T  26992370 tggttacacctcaaaatgacaaaattgcccttgaataaaatttaattttcaaa 26992318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 28885796 - 28885720
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||||||    
T  28885796 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 28885720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 256
Target Start/End: Original strand, 34917539 - 34917623
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    |||||||||| || ||||||  |||||  ||| | ||||  |||||||||| |||| ||||||||||||||| ||||||||||||    
T  34917539 agtttttctacttgcaccctagttaatcatggatgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaag 34917623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 38168527 - 38168483
Alignment:
Q  213 aaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    ||||||| ||||||| |||| ||||||||||||||||||||||||    
T  38168527 aaaatgataaaattacccttccataaaatttaattttcaaaaagc 38168483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 15839455 - 15839530
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||||||    
T  15839455 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 15839530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 253
Target Start/End: Complemental strand, 12713663 - 12713578
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaa 253  Q
    |||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| | ||| ||||||||| |||||||||    
T  12713663 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattacctttttataaaatttgattttcaaa 12713578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 36885838 - 36885745
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||| ||||| |||||| |||| |||||||||||||||| ||||||||||||||| ||||||||||||| |||||    
T  36885838 agagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaattttattttcaaaaagcatcttc 36885745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 38145338 - 38145245
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||| |||| ||||| |||||| |||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  38145338 agagtttttctaattacatcctgtttaattctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttc 38145245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 168 - 263
Target Start/End: Complemental strand, 36232771 - 36232676
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||||| || ||||| |||||| |||| |||||||||||||||| ||||||||||||||||||||| |||||| ||||||    
T  36232771 ttagagtttttctaattacaccatgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttaaaaaagactcttc 36232676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 7681100 - 7681008
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||||  ||||| |||||| |||| |||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  7681100 gagtttttctaattacaccctatttaattctggttgcaccctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttc 7681008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 44354598 - 44354511
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||  ||||||||| |||||||||| ||||||||||||||||||||||    
T  44354598 ttagagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaa 44354511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 33392508 - 33392596
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    ||||||||||||||||||||||||  ||||| ||||||| |||  ||||||||||||||| | ||||||||||||||||||||||||||    
T  33392508 ttagagtttttctaattacaccctatttaatcctggttataccccaaaatgacaaaattaccttttcataaaatttaattttcaaaaag 33392596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 35039572 - 35039664
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||||  ||||| |||||| ||||  ||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  35039572 gagtttttctaattacaccctttttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttc 35039664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 19941680 - 19941774
Alignment:
Q  169 tagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||| ||| ||||| |||||| |||  |||||||| |||||||| ||| |||||||||||||||||||||||| |||||    
T  19941680 tagagtttttctaattacacactgtttaattctggttgcactctaaaatgataaaattattcttccataaaatttaattttcaaaaagcatcttc 19941774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 51662258 - 51662167
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||| | || ||||| |||||| || | |||||||| |||||||||||| |||||||||||||||||||||||| |||||    
T  51662258 agtttttctaattacatcttgtttaatcctggttgcatcctaaaatgataaaattatccttccataaaatttaattttcaaaaagcatcttc 51662167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 172 - 262
Target Start/End: Original strand, 48584835 - 48584925
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctctt 262  Q
    |||||| |||||||||||| | ||||| ||||||  ||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  48584835 agttttactaattacacccagtttaatcctggttgtactccaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcatctt 48584925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 2613424 - 2613339
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    ||||| ||||||||||||||||| |||||  ||||| ||  | ||||||| |||||||||||||||||||||||||||||||||||    
T  2613424 agagtatttctaattacaccctgtttaatcttggttgcatttcaaaatgataaaattatcctttcataaaatttaattttcaaaaa 2613339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 36841202 - 36841110
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||| |||  ||||| ||||||  |||| ||||||| ||||||| |||| |||||||||||||||||||||||| |||||    
T  36841202 gagtttttctaattacatcctttttaatcctggttgtacctcaaaatgataaaattacccttccataaaatttaattttcaaaaagcatcttc 36841110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 47098400 - 47098308
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||  |||| ||||||| | | | |||||||||||||| |||| |||||||||| |||||||||||| ||||||    
T  47098400 gagtttttctaattacaccctgtgtaatcctggttatatcatgaaatgacaaaattacccttgcataaaatttcattttcaaaaagtctcttc 47098308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 263
Target Start/End: Original strand, 30418687 - 30418782
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||||| |||||  ||| | |||   ||||||||| ||||||||||  ||||||||||||||||||||||| |||||    
T  30418687 ttagagtttttctaattacaccctgtttaatcatggctgcactccaaaatgacagaattatccttctataaaatttaattttcaaaaagcatcttc 30418782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 263
Target Start/End: Original strand, 52343083 - 52343174
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||| | || |||||  |||||  || |||||||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  52343083 agtttttctaattacatcatgtttaatcttggttgaactttaaaatgacaaaattattcttccataaaatttaattttcaaaaagcatcttc 52343174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 263
Target Start/End: Original strand, 52812125 - 52812219
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||||| ||||| ||| ||  |  | |||||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  52812125 ttagagtttttctaattacaccctgtttaatcctgattgtat-tcaaaatgacaaaattattcttccataaaatttaattttcaaaaagcatcttc 52812219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 4516112 - 4516023
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| |||| ||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  4516112 agagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 4516023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 256
Target Start/End: Original strand, 11123858 - 11123943
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    |||||||||||||||||| ||  ||||| |||||| | ||  ||||||||||||||| |||| |||||||||||||||||||||||    
T  11123858 gagtttttctaattacactctatttaatcctggttgcgccccaaaatgacaaaattacccttccataaaatttaattttcaaaaag 11123943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 49779947 - 49779859
Alignment:
Q  174 tttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||| || |||||  ||||| || |  ||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  49779947 tttttctaattacacc-tgtttaatcttggttgcatcccaaaatgacaaaattatcttttcataaaatttaattttcaaaaagcatcttc 49779859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 11095647 - 11095739
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||||  ||||| |||||| || | ||||||||||||| || ||||  |||| |||||||||||||||||| |||||    
T  11095647 gagtttttctaattacaccctatttaatcctggttgcatcataaaatgacaaaaatacccttctataatatttaattttcaaaaagcatcttc 11095739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 14279112 - 14279192
Alignment:
Q  177 ttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    |||||||||||||| | ||||| |||||| |||| ||||||||||||||||   || ||||||||||||||||||||||||    
T  14279112 ttctaattacaccccgtttaatcctggttgcaccctaaaatgacaaaattacttttccataaaatttaattttcaaaaagc 14279192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 259
Target Start/End: Original strand, 25710882 - 25710974
Alignment:
Q  167 attagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  25710882 attagagtttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 25710974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 37971771 - 37971683
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||||||||||||||||||| |||||||||||||||    
T  37971771 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcct 37971683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 263
Target Start/End: Complemental strand, 4596525 - 4596431
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||| |||| ||||| || ||| || |  ||||||||||||||| |||| ||||||| |||||||||||||||| |||||    
T  4596525 ttagagtttttctaattacatcctgtttaatcctagttgcatcccaaaatgacaaaattacccttccataaaa-ttaattttcaaaaagcatcttc 4596431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 259
Target Start/End: Complemental strand, 4044910 - 4044817
Alignment:
Q  166 aattagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||||||| || ||||||  |||||  ||||| ||||  ||||| |||| |||| ||||||||||||||| |||||||||||||||    
T  4044910 aattagagtttttctacttgcaccctagttaatcatggttgcaccccaaaataacaagattaccctttcataaaatttgattttcaaaaagcct 4044817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 20835680 - 20835591
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  20835680 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 20835591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 22782005 - 22781916
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  22782005 agagtttttctacttgcaccctagttaatcatggttgcaccacaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 22781916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 35155854 - 35155765
Alignment:
Q  174 tttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||| || ||| ||||| || ||| ||| | ||||||| ||||||||||||  ||||||||||||||||||||||| |||||    
T  35155854 tttttctaattaaacactgtttaatcctagttgcacttcaaaatgataaaattatccttctataaaatttaattttcaaaaagcatcttc 35155765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 38871119 - 38871208
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  38871119 agagtttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 38871208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 10841529 - 10841441
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  10841529 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 10841441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 263
Target Start/End: Original strand, 41588879 - 41588968
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||| ||||| || |||||  |||||||| |||||||||| |||||||  |||||||||||||||  ||| |||||||||||||    
T  41588879 agtttttctaatcacaccgtgtttaattttggttacatcttaaaatgataaaattactctttcataaaattta--ttttaaaaagcctcttc 41588968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 40586269 - 40586182
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||    
T  40586269 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 40586182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 41069837 - 41069923
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||| || ||||||  |||||  ||||| ||||| |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  41069837 agtttttctacttgcaccctagttaatcatggttgcacct-aaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 41069923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 10999843 - 10999757
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||    
T  10999843 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 10999757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 33712690 - 33712632
Alignment:
Q  201 tggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||| |||| ||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  33712690 tggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 33712632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 26090200 - 26090276
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    |||||||||||| || ||||||  |||||  ||||| ||||| |||||||||| |||| ||||||||||||||||||    
T  26090200 agagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattaccctttcataaaatttaat 26090276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 53974310 - 53974398
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| || |||||||||||| |||||||||||||||    
T  53974310 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattacccattcataaaatttgattttcaaaaagcct 53974398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 257
Target Start/End: Original strand, 20048334 - 20048420
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    ||||||||||| || || |||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||    
T  20048334 gagtttttctacttgcatcctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 20048420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 33966894 - 33966980
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    |||||||||||| || ||||||  |||||  ||||| || |  |||||||||| |||| ||||||||||||||| ||||||||||||    
T  33966894 agagtttttctacttgcaccctagttaatcatggttgcatcccaaaatgacaagattaccctttcataaaatttgattttcaaaaag 33966980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 255
Target Start/End: Complemental strand, 35233751 - 35233678
Alignment:
Q  181 aattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    |||||||||||| ||||| |||||| ||   |||||||| |||||||||||||||||||| |||||||| |||||    
T  35233751 aattacaccctgtttaatcctggttgcattctaaaatgataaaattatcctttcataaaa-ttaatttttaaaaa 35233678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 32236130 - 32236207
Alignment:
Q  169 tagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    ||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||||||    
T  32236130 tagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 32236207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 36430267 - 36430355
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| ||||  |||| ||||||||| |||||||||||||||    
T  36430267 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattactctttgataaaatttgattttcaaaaagcct 36430355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 84388 - 84463
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||||||    
T  84388 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 84463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 54556377 - 54556432
Alignment:
Q  201 tggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    |||||||| | |||||||| ||||||| ||||||||||||||| ||||| ||||||    
T  54556377 tggttacatcctaaaatgataaaattaccctttcataaaatttgatttttaaaaag 54556432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 6268413 - 6268367
Alignment:
Q  213 aaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||| |||| |||||| |||||||| |||||||||||||||    
T  6268413 aaaatgacaagattaccctttcctaaaatttgattttcaaaaagcct 6268367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 39627177 - 39627135
Alignment:
Q  212 taaaatgacaaaattatcctttcataaaatttaattttcaaaa 254  Q
    |||||||||||||||||||||| |||||||||| |||| ||||    
T  39627177 taaaatgacaaaattatccttttataaaatttatttttaaaaa 39627135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 8947914 - 8947866
Alignment:
Q  214 aaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||| ||||||| | ||| |||||||||||||||||||    
T  8947914 aaatgacaaaattatc-tttcatatagtttgattttcaaaaagcctcttc 8947866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 256
Target Start/End: Original strand, 1774036 - 1774120
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    |||||||||||||||| | ||  |||| | |||||||||  |||| || ||||||| | || |||||||||||||||| ||||||    
T  1774036 agtttttctaattacatcatgtgtaatcccggttacaccccaaaacgataaaattacctttacataaaatttaatttttaaaaag 1774120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 20657485 - 20657409
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    |||||||||||| || ||||||  |||||  ||||| |||   |||||||||| |||| ||||||||||||||||||    
T  20657485 agagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaatttaat 20657409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 45443640 - 45443548
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||| || ||||| ||| |||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  45443640 gagtttttctaattacaccatgtttaatcctgattacacctcaaaatgataaaattaccctttcataaaatttaattttcaaaaagcctcttc 45443548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 13480635 - 13480548
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    |||||||||||||||||||| || ||||| ||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13480635 agagtttttctaattacaccatgtttaatcctgattgcaccttaaaatgacaaaattaccctttcataaaatttaattttcaaaaagc 13480548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 4331969 - 4331881
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    ||||||||||||||||||||||||  ||||| |||||| || | |||||||||||||||| ||||||||||||||||||||||||||||    
T  4331969 ttagagtttttctaattacaccctctttaatcctggttgcatcctaaaatgacaaaattaccctttcataaaatttaattttcaaaaag 4331881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 38629494 - 38629402
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||||  ||||| |||||| || | |||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  38629494 gagtttttctaattacaccctctttaatcctggttgcatcctaaaatgataaaattatcctttcataaaatttaattttcaaaaagactcttc 38629402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 44798809 - 44798901
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||| ||||||||||||| ||||| |||||||||| | |||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  44798809 gagtttttttaattacaccctgtttaatcctggttacacttcaaaatgacaaaattactctttcataaaatttaagtttcaaaaagcctcttc 44798901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 7722759 - 7722666
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||| ||||| |||||| ||||| ||||||| ||||||| |||| ||||||||||||||| |||||||| |||||    
T  7722759 agagtttttctaattacaccctgtttaattctggttgcacctcaaaatgataaaattacccttccataaaatttaatttacaaaaagcatcttc 7722666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 262
Target Start/End: Original strand, 26170973 - 26171067
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctctt 262  Q
    ||||||||||||||||||||||||| |||||  ||||| ||||  ||||| ||||||||| |||| |||||||||||||||||||||||| ||||    
T  26170973 ttagagtttttctaattacaccctgtttaatcttggttgcaccccaaaataacaaaattacccttccataaaatttaattttcaaaaagcatctt 26171067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 21657924 - 21658015
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||||| || ||||||  |||||  ||||| |||| ||||||||||| |||||||||||||||||||| |||||||||||||||    
T  21657924 ttagagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcct 21658015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 458695 - 458602
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||| ||| ||||| |||||| || | |||||||| ||||||||| ||  ||||||||||||||||||||||| |||||    
T  458695 agagtttttctaattacactctgtttaatcctggttgcatcctaaaatgataaaattatcattctataaaatttaattttcaaaaagcatcttc 458602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 34202278 - 34202367
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||||||||  |||||||||| |||||||||||||||||||| |||||||||||||||    
T  34202278 agagtttttctacttgcaccctagttaatcatggttacaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcct 34202367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 259
Target Start/End: Complemental strand, 2390775 - 2390683
Alignment:
Q  167 attagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||| |||||||| || ||||||  |||||  ||||| |||| ||||||||||| |||||||||||||||||||| |||||||||||||||    
T  2390775 attagaatttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcct 2390683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 31569711 - 31569652
Alignment:
Q  204 ttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  31569711 ttacaccctaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttc 31569652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 44456895 - 44456805
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||  || ||||| |||||| || | |||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  44456895 agagtttttctaattacac--tgtttaat-ctggttgcatcctaaaatgataaaattaccctttcataaaatttaattttcaaaaagcatcttc 44456805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 259
Target Start/End: Original strand, 3178221 - 3178314
Alignment:
Q  166 aattagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||||||| || ||||||  |||||  ||||| |||| |||||||| || |||| ||||||||||||||| |||||||||||||||    
T  3178221 aattagagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgataagattaccctttcataaaatttgattttcaaaaagcct 3178314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 45505871 - 45505782
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| |||||||||||||||||||||||||||||||    
T  45505871 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaattttcaaaaagcct 45505782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 5109256 - 5109188
Alignment:
Q  195 taatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||| ||||||||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||||||    
T  5109256 taatcctggttacactctaaaatgacaaaattattcttacataaaatttaattttcaaaaaacctcttc 5109188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 927063 - 927152
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  927063 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 927152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 15011818 - 15011907
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  15011818 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 15011907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 40659317 - 40659233
Alignment:
Q  174 tttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||| ||||| || |||||  ||||||||| ||||||||| ||||||| ||||| ||||||||||||||| |||||||||    
T  40659317 tttttctaatcacaccatgtttaattatggttacactttaaaatgaaaaaattacccttttataaaatttaatttt-aaaaagcct 40659233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 42342967 - 42343056
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  ||||||| || |||||||||||||||||||| |||||||||||||||    
T  42342967 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattatcctttcataaaatttgattttcaaaaagcct 42343056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 1481811 - 1481899
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  1481811 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 1481899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 255
Target Start/End: Complemental strand, 4073583 - 4073499
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    |||||||||||||||||| ||| |||||  | |||  |  ||||||||| |||||||||||| ||||||||||||||||||||||    
T  4073583 gagtttttctaattacactctgtttaatcttagttgaattttaaaatgataaaattatccttccataaaatttaattttcaaaaa 4073499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 13196222 - 13196134
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  13196222 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 13196134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 25853517 - 25853429
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  25853517 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 25853429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 40811857 - 40811769
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  ||||||| || |||||||||||||||||||| |||||||||||||||    
T  40811857 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgaaaagattatcctttcataaaatttgattttcaaaaagcct 40811769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 44143360 - 44143448
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  44143360 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 44143448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 10638777 - 10638864
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    ||||||||||||  | ||||||  |||||  ||||| |||| ||||||||||| |||| ||||||||||||||| |||||||||||||    
T  10638777 agagtttttctacctgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 10638864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 43577033 - 43577091
Alignment:
Q  201 tggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||| |||| ||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  43577033 tggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 43577091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 1520176 - 1520264
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  ||||||| || |||| ||||||||||||||| |||||||||||||||    
T  1520176 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagcct 1520264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 10554848 - 10554756
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||| |||||| |||||  |||||  | |||||| |  ||||||| |||||||  |||| |||||||||||||||||||||||||||||    
T  10554848 gagtttttttaattataccctttttaattttagttacatcacaaaatgataaaattactcttttataaaatttaattttcaaaaagcctcttc 10554756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 263
Target Start/End: Complemental strand, 31640882 - 31640799
Alignment:
Q  180 taattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||  |||||  |||| ||||  |||||| | |||||||||||| ||  ||||||||||||||||||||||||||    
T  31640882 taattacaccctctttaatcttggtcacactctaaaataataaaattatccttccaataaatttaattttcaaaaagcctcttc 31640799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 39697862 - 39697776
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    ||||||||||| || ||||||  |||||  | ||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||    
T  39697862 gagtttttctacttgcaccctagttaatcatagttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 39697776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 27980966 - 27980921
Alignment:
Q  201 tggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    ||||||||||  |||||||||| |||||||||||||||||||||||    
T  27980966 tggttacaccccaaaatgacaagattatcctttcataaaatttaat 27980921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 28067496 - 28067451
Alignment:
Q  201 tggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    ||||||||||  |||||||||| |||||||||||||||||||||||    
T  28067496 tggttacaccccaaaatgacaagattatcctttcataaaatttaat 28067451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 16313668 - 16313576
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||| ||||| ||| ||||| ||  || ||   |||||||| |||||||  |||| ||||||||||||||||||||||| |||||    
T  16313668 gagtttttctaactacactctgtttaatcctaattgcattctaaaatgataaaattaatcttttataaaatttaattttcaaaaagcatcttc 16313576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 37094130 - 37094176
Alignment:
Q  213 aaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||| || |||||| ||||||||||||| |||||||||||||||    
T  37094130 aaaatgataagattatcttttcataaaatttgattttcaaaaagcct 37094176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 255
Target Start/End: Complemental strand, 8035060 - 8034975
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaa-ttatcctttcataaaatttaattttcaaaaa 255  Q
    |||||||||||||||| | | | ||||| |||||| || || ||||||| |||| ||||  ||| |||||||||||||||||||||    
T  8035060 gagtttttctaattaccctccgtttaattctggttgcatctcaaaatgataaaaattatttttttataaaatttaattttcaaaaa 8034975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 32551753 - 32551681
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatt 242  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||    
T  32551753 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatt 32551681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 5e-28; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 168 - 263
Target Start/End: Original strand, 22847101 - 22847196
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||  ||||||||| ||||||| ||||||||||||||||||||||||||| |||||    
T  22847101 ttagagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatcttttcataaaatttaattttcaaaaagcatcttc 22847196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 19148994 - 19149072
Alignment:
Q  92 caaattaattagctacaactccctcaaattacgtcgctcaataaatttgtatcggatacatataatataaaagtaatta 170  Q
    ||||||||||||||  ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  19148994 caaattaattagctttaactccctcaaattacgtcgcacaataaatttgtatctgatacatataatataaaagtaatta 19149072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 24896984 - 24897077
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||| || ||||| |||||||||||  |||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  24896984 agagtttttctaattacaccttgtttaatcctggttacaccccaaaatgacaaaattactctttcataaaatttaagtttcaaaaagcctcttc 24897077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 40430120 - 40430216
Alignment:
Q  169 tagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttctt 265  Q
    ||||||||||||||||||| | || ||||| |||||| |||| |||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  40430120 tagagtttttctaattacatcatgtttaatcctggttgcaccctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttctt 40430216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 172 - 263
Target Start/End: Original strand, 34159011 - 34159102
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||| || ||||| |||||| || |||||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  34159011 agtttttctaattacaccttgtttaattctggttgcatcttaaaatgacaaaattatccttctataaaatttaattttcaaaaagcatcttc 34159102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 11682207 - 11682300
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||  ||| | ||| |||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  11682207 agagtttttctaattacattctgttcaatcctggttgcaccctaaaatgataaaattatcctttcataaaatttaattttcaaaaagcatcttc 11682300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 11690486 - 11690579
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||  ||| | ||| |||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  11690486 agagtttttctaattacattctgttcaatcctggttgcaccctaaaatgataaaattatcctttcataaaatttaattttcaaaaagcatcttc 11690579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 24034518 - 24034610
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||||| ||||| ||||||  |||  ||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  24034518 gagtttttctaattacaccctgtttaattctggttgtaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttc 24034610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 35339742 - 35339650
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||| || ||||| |||||| |||| ||||||||||| |||| |||| |||||||||||||||||||||||| |||||    
T  35339742 gagtttttctaattacaccatgtttaatcctggttgcaccctaaaatgacaagattacccttccataaaatttaattttcaaaaagcatcttc 35339650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 166 - 256
Target Start/End: Complemental strand, 43458494 - 43458404
Alignment:
Q  166 aattagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    ||||||||||||| ||||||||||||| |||||  ||||| ||||  ||||||||||||||| |||| |||||||||||||||||||||||    
T  43458494 aattagagtttttataattacaccctgtttaatcatggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaag 43458404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 51322646 - 51322735
Alignment:
Q  167 attagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    ||||||||||||||||||||| | || |||||  ||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  51322646 attagagtttttctaattacatc-tgtttaatcttggttgcacctcaaaatgataaaattatcctttcataaaatttaattttcaaaaagc 51322735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 8713227 - 8713315
Alignment:
Q  174 tttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||| |||||||| ||||| || ||||||||  ||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  8713227 tttttctaatcacaccctgtttaatccttgttacaccccaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttc 8713315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 41202444 - 41202351
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||| || ||||| |||||| ||||  ||||||||| |||||||||| ||||||||||||||||||||| || |||||    
T  41202444 agagtttttctaattacaccatgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaatgcatcttc 41202351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 262
Target Start/End: Original strand, 1522782 - 1522874
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctctt 262  Q
    |||||||||||||||| |||||| ||||| |||||| || | ||||||||||||||||  ||| |||||||||||||||||||||||| ||||    
T  1522782 agagtttttctaattataccctgtttaatcctggttgcatcctaaaatgacaaaattactcttccataaaatttaattttcaaaaagcatctt 1522874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 22301842 - 22301751
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||| |||||||| ||||| |||||| ||||  ||||| ||||||||| ||||||||||||||||||||| |||||||||||||    
T  22301842 gagtttttctaatcacaccctgtttaatcctggttgcaccccaaaataacaaaattaccctttcataaaatttaatttt-aaaaagcctcttc 22301751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 255
Target Start/End: Complemental strand, 43621672 - 43621588
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    |||||||||||||||||||||  ||||| ||| || || | |||||||||||||||||||||| |||||||||||||||||||||    
T  43621672 gagtttttctaattacaccctttttaatcctgattgcatcctaaaatgacaaaattatccttttataaaatttaattttcaaaaa 43621588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 262
Target Start/End: Original strand, 48990344 - 48990436
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctctt 262  Q
    ||||||||||||||||||||||  ||||| || ||| |||| |||||||| ||||||| |||| |||||||||||||||||||||||| ||||    
T  48990344 agagtttttctaattacaccctatttaatcctcgttgcaccctaaaatgataaaattacccttccataaaatttaattttcaaaaagcatctt 48990436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 50602126 - 50602034
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||| ||||||||||||| ||||| |||||| ||  ||||||| ||||||||||||||| |||||||||||||||| |||||| |||||    
T  50602126 gagtttttttaattacaccctgtttaatcctggttgcattttaaaataacaaaattatccttttataaaatttaattttcgaaaagcatcttc 50602034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 28804066 - 28803975
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctctt 262  Q
    |||||||||||||| ||||||| |||||  |||||  ||| |||||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  28804066 gagtttttctaattgcaccctgtttaatcatggttgtaccctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatctt 28803975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 263
Target Start/End: Original strand, 32135358 - 32135447
Alignment:
Q  173 gtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||| |||| |||||||| ||||| ||||||||| | |||||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  32135358 gtttttttaatcacaccctgtttaatgctggttacatcctaaaatgacaaaattaccttttcataaaatttaatttt-aaaaagcctcttc 32135447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 262
Target Start/End: Original strand, 50561561 - 50561654
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctctt 262  Q
    ||||||||||||||||||||| ||| ||||| |||||| |||  |||||||||||||||| |||| ||||||| |||||||||||||||| ||||    
T  50561561 ttagagtttttctaattacactctgtttaatcctggttgcactctaaaatgacaaaattacccttccataaaa-ttaattttcaaaaagcatctt 50561654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 19874221 - 19874132
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || |||||| ||||||  ||||| |||| ||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  19874221 agagtttttctacttgcaccctacttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 19874132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 42348659 - 42348748
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| |||| ||||||||||| |||||||||||||||||||| |||||||||||||||    
T  42348659 agagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcct 42348748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 3026381 - 3026473
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||| |||||| | ||| ||| || || | |||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  3026381 gagtttttctaattaaaccctgttaaatcctgattgcatcctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttc 3026473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 265
Target Start/End: Original strand, 32932578 - 32932678
Alignment:
Q  165 taattagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttct 264  Q
    |||| |||||||||||||||| | |||| ||||| |||||| || || |||||||||||||||   ||||||||||||||||||| ||||||| ||||||    
T  32932578 taataagagtttttctaattatatcctgtttaattctggttgcatctcaaaatgacaaaattacattttcataaaatttaattttaaaaaagcatcttct 32932677  T
Q  265 t 265  Q
    |    
T  32932678 t 32932678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 37683359 - 37683268
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||| |||||||| ||||| ||||||||||   |||||| |||||||||| ||||||||||||||||||| ||||||| |||||    
T  37683359 gagtttttctaatcacaccctgtttaatcctggttacactccaaaatgtcaaaattatcatttcataaaatttaatttt-aaaaagcatcttc 37683268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 52307555 - 52307467
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| |||||||||  |||||  ||||| || | |||||||| || ||||||||||||||||||||||||||||||||||||    
T  52307555 gagtttttctacttacaccctagttaatcatggttgcatcctaaaatgataagattatcctttcataaaatttaattttcaaaaagcct 52307467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 263
Target Start/End: Complemental strand, 49414 - 49331
Alignment:
Q  180 taattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||| |||||  ||||| |||  |||||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  49414 taattacaccctgtttaatcttggttgcactctaaaatgacaaaattaccctttcataaaatttaatttttaaaaagcatcttc 49331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 30217220 - 30217129
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||  |||  ||||| |||||| ||  | |||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  30217220 agtttttctaattacgtcctatttaatcctggttgcatttaaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttc 30217129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 48349584 - 48349490
Alignment:
Q  169 tagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||| || ||||| ||||||  ||  |||||||| ||||||| | ||| |||||||||||||||||||||| ||||||    
T  48349584 tagagtttttctaattacaccttgtttaatcctggttgtactctaaaatgataaaattacctttttataaaatttaattttcaaaaagactcttc 48349490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 265
Target Start/End: Complemental strand, 51322487 - 51322393
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttctt 265  Q
    |||||||||||||||||| ||| ||||| |||||| || |  |||| || ||||||| |||| |||||||||||||||||||||||| |||||||    
T  51322487 gagtttttctaattacactctgtttaattctggttgcatcccaaaaggataaaattacccttccataaaatttaattttcaaaaagcatcttctt 51322393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 55215692 - 55215603
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||||||||||||||||||| |||||||||||||||    
T  55215692 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcct 55215603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 20434162 - 20434250
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || |||||| ||||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  20434162 gagtttttctacttgcaccctacttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 20434250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 47467505 - 47467413
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||||| |||||  ||||| || |  ||||||||||||||| |||| ||||||||||| |||| ||||||| |||||    
T  47467505 gagtttttctaattacaccctgtttaatcatggttgcatcccaaaatgacaaaattacccttccataaaatttagtttttaaaaagcatcttc 47467413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 263
Target Start/End: Complemental strand, 20293396 - 20293301
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||||  || ||||| ||  || ||||||||||||| ||||||||||||   ||||||||||||||||||| || |||||    
T  20293396 ttagagtttttctaattacactttgtttaatcctaattgcaccttaaaatgataaaattatccttctttaaaatttaattttcaaaatgcatcttc 20293301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 259
Target Start/End: Complemental strand, 43830318 - 43830227
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||||  || ||||||  |||||  ||||| ||||| |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  43830318 ttagagtttttctccttgcaccctagttaatcatggttgcacctcaaaatgacaatattaccctttcataaaatttgattttcaaaaagcct 43830227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 263
Target Start/End: Original strand, 50469060 - 50469155
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||||| |||| ||||| ||||||  ||  |||||||| ||||||||||||  ||||| ||||||||| ||||||| |||||    
T  50469060 ttagagtttttctaattacatcctgtttaatcctggttgtactctaaaatgataaaattatccttctataaactttaatttttaaaaagcatcttc 50469155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 55219864 - 55219955
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  55219864 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 55219955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 13962575 - 13962490
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    |||||||||||||||||||||| ||||| || ||| ||||  ||||||||||||||| | || ||||||| ||||||||||||||||    
T  13962575 gagtttttctaattacaccctgtttaatcctagttgcaccccaaaatgacaaaattacctttccataaaa-ttaattttcaaaaagc 13962490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 31709712 - 31709790
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    |||||||||||||| || ||||||  |||||  ||||| |||||||||||||||| |||||||||| ||||||||||||    
T  31709712 ttagagtttttctacttgcaccctaattaatcatggttgcaccttaaaatgacaagattatccttttataaaatttaat 31709790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 23895294 - 23895205
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| || |  |||||||||| |||||||||||||||||||| |||||||||||||||    
T  23895294 agagtttttctacttgcaccctagttaatcatggttgcatcccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcct 23895205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 38291954 - 38291865
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  38291954 agagtttttctacttgcaccctagttaatcatggttgcaccaaaaaatgacaagattaacctttcataaaatttgattttcaaaaagcct 38291865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 39540500 - 39540411
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  39540500 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 39540411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 52913292 - 52913203
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  52913292 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 52913203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 37234303 - 37234215
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || |||| |  |||||  ||||| ||||  |||||||||| |||||||||||||||||||| |||||||||||||||    
T  37234303 gagtttttctacttgcaccttagttaattatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcct 37234215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 42724279 - 42724191
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  42724279 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 42724191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 258
Target Start/End: Complemental strand, 53875209 - 53875121
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcc 258  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| ||||||||||||||    
T  53875209 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcc 53875121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 56362815 - 56362902
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    |||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||    
T  56362815 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaa 56362902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 3019679 - 3019757
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    ||||||||||| |||||||||||||  |||| || |||||||| |||| ||||||||||| ||||| || |||||||||    
T  3019679 ttagagtttttttaattacaccctgtgtaattctagttacaccataaagtgacaaaattacccttttatcaaatttaat 3019757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 10542130 - 10542044
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||    
T  10542130 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagc 10542044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 28406536 - 28406451
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    ||||||||||  || ||||||  |||||  ||||| ||||  |||||||||| |||||||||||||||||||| ||||||||||||    
T  28406536 gagtttttctccttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaag 28406451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 257
Target Start/End: Complemental strand, 52839833 - 52839744
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    |||||||||||||| || || |||  |||||  ||||| ||||  |||| |||||||||| ||||||||||||||| |||||||||||||    
T  52839833 ttagagtttttctacttgcatcctagttaatcatggttgcaccccaaaacgacaaaattaccctttcataaaatttgattttcaaaaagc 52839744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 613823 - 613911
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || |||||   |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  613823 gagtttttctacttgcaccccagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 613911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 262
Target Start/End: Original strand, 7318431 - 7318519
Alignment:
Q  175 ttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttc-ataaaatttaattttcaaaaagcctctt 262  Q
    |||| ||||||||| ||  ||||| ||| || ||||| ||||| |||||||||||| ||| ||||||||||||||||||||||| ||||    
T  7318431 ttttttaattacactctatttaatcctgattgcacctcaaaattacaaaattatcccttccataaaatttaattttcaaaaagcatctt 7318519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 253
Target Start/End: Complemental strand, 53036114 - 53036031
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaa 253  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||    
T  53036114 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaa 53036031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 37828752 - 37828836
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    |||||||||||||||||||| |  |||||  ||||| ||  | ||||| ||||||||| ||| |||||||||||||||||||||||    
T  37828752 agagtttttctaattacacc-tctttaatcttggttgcatatcaaaataacaaaattaccctctcataaaatttaattttcaaaaa 37828836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 20737689 - 20737765
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||||||    
T  20737689 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 20737765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 259
Target Start/End: Original strand, 25857537 - 25857628
Alignment:
Q  167 attagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||||||| || ||||||  | |||  ||||| ||||  |||||||||| |||| | ||||||||||||| |||||||||||||||    
T  25857537 attagagtttttctacttgcaccctaat-aatcatggttgcaccccaaaatgacaagattaccttttcataaaatttgattttcaaaaagcct 25857628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 55183625 - 55183537
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  ||||||| || ||||  |||||||||||||| |||||||||||||||    
T  55183625 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattactctttcataaaatttgattttcaaaaagcct 55183537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 224 - 263
Target Start/End: Original strand, 36851458 - 36851497
Alignment:
Q  224 attatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  36851458 attaccctttcataaaatttaattttcaaaaagactcttc 36851497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 56018795 - 56018716
Alignment:
Q  167 attagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaat 246  Q
    ||||||||||||||| || || |||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||||||    
T  56018795 attagagtttttctacttgcatcctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaat 56018716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 73
Target Start/End: Original strand, 19148952 - 19148982
Alignment:
Q  43 taacaaatttaattagttactttacttactt 73  Q
    |||||||||||||||||||||||||||||||    
T  19148952 taacaaatttaattagttactttacttactt 19148982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 47429928 - 47429844
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    ||||||||||||||||||  ||  ||||| |||||| || | |||||||| |||||||  ||||||||||| |||||||| |||||    
T  47429928 agagtttttctaattacattctatttaatcctggttgcatcctaaaatgataaaattactctttcataaaa-ttaatttttaaaaa 47429844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 7817814 - 7817850
Alignment:
Q  212 taaaatgacaaaattatcctttcataaaatttaattt 248  Q
    |||||||||||||||||||||  ||||||||||||||    
T  7817814 taaaatgacaaaattatccttaaataaaatttaattt 7817850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 263
Target Start/End: Original strand, 23350351 - 23350446
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||  |||||||  ||||||||||| |||||||||||||||||||||||| |||||    
T  23350351 ttagagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgatcaaattatccttccataaaatttaattttcaaaaagcatcttc 23350446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 6925776 - 6925869
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||| ||||| ||| || ||||  ||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  6925776 agagtttttctaattacaccctgtttaatcctgattgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttc 6925869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 34085927 - 34085836
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||| |||||||||||||  |||| |||||| ||||  |||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  34085927 agtttttttaattacaccctgtgtaatcctggttgcaccccaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttc 34085836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 6625357 - 6625446
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| |||||||||  |||||  ||||| |||| ||||||||||| |||||||||||||||||||| |||||||||||||||    
T  6625357 agagtttttctacttacaccctagttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcct 6625446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 18024378 - 18024471
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||||| ||||| |||||||||   |||||||||||||||  ||||||||||||| ||||||| ||||||| |||||    
T  18024378 agagtttttctaattacaccctgtttaattctggttacattctaaaatgacaaaattgccctttcataaaatctaattttgaaaaagcttcttc 18024471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 11369167 - 11369079
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaag 256  Q
    ||||||||||||||||||||||||| |||||  ||||| ||||| |||||||||||||||  |||  ||||||||||||||||||||||    
T  11369167 ttagagtttttctaattacaccctgtttaatcttggttgcacctcaaaatgacaaaattactcttctataaaatttaattttcaaaaag 11369079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 29623245 - 29623165
Alignment:
Q  182 attacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctctt 262  Q
    |||||||| || ||||| |||||| ||||||||||||||||||||||| || |||||||||||||||||||||||| ||||    
T  29623245 attacaccatgtttaatcctggttgcaccttaaaatgacaaaattatctttccataaaatttaattttcaaaaagcatctt 29623165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 32173794 - 32173702
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttca-aaaagcctcttc 263  Q
    ||||||||||||||||||||| ||||| ||||||||| |  ||||||||||||||| | ||| ||||||||||||||||| ||||||||||||    
T  32173794 agtttttctaattacaccctgtttaattctggttacatcccaaaatgacaaaattaccattttataaaatttaattttcaaaaaagcctcttc 32173702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 5714880 - 5714969
Alignment:
Q  174 tttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||| |||| || || |||||| ||| | ||||| ||||||||| ||||||||||||||||||||||||||||| |||||    
T  5714880 tttttctaattacatcctgattgattctggttgcacttcaaaataacaaaattaccctttcataaaatttaattttcaaaaagcatcttc 5714969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 8525525 - 8525617
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||||||||||||||| ||| ||||| |||||| || |  ||||||| ||||||| |||| |||||||||||||||||||||||| |||||    
T  8525525 gagtttttctaattacacactgtttaattctggttgcatcccaaaatgataaaattacccttccataaaatttaattttcaaaaagcatcttc 8525617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 31091230 - 31091150
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttc 250  Q
    |||||||||||||||||||| || ||||| |||||| ||||  ||||||||||||||| |||| |||||||||||||||||    
T  31091230 agagtttttctaattacaccatgtttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttc 31091150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 257
Target Start/End: Original strand, 18893675 - 18893761
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    ||||||||||| || ||||||  |||||  ||||||||||  |||||||||| |||||||||||||||||||| |||||||||||||    
T  18893675 gagtttttctacttgcaccctagttaatcatggttacaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagc 18893761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 25335222 - 25335136
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    ||||||||||| || ||||||  |||||  ||||| ||||| |||||||||| |||||||||||||||||||| |||||||||||||    
T  25335222 gagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattatcctttcataaaatttgattttcaaaaagc 25335136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 7080975 - 7081064
Alignment:
Q  174 tttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||| |||  || | |||||||||||  ||||||| ||||||||||||  ||||||||| |||||||||||||||||||    
T  7080975 tttttctaattacacactgtatattcctggttacaccccaaaatgataaaattatccttagataaaatttgattttcaaaaagcctcttc 7081064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 6168020 - 6167932
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| |||| ||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  6168020 gagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaacctttcataaaatttgattttcaaaaagcct 6167932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 3094584 - 3094674
Alignment:
Q  167 attagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    ||||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||    
T  3094584 attagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagc 3094674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 8811384 - 8811295
Alignment:
Q  174 tttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||| |  || | |||||||||||  ||||||| |||||||||||| |||||||||| ||||| ||||||| |||||    
T  8811384 tttttctaattacaccccgtatattcctggttacaccccaaaatgataaaattatccttacataaaatttgattttgaaaaagcatcttc 8811295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 13890043 - 13889954
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  ||||| |||| |||| ||||||||||||||| |||||||||||||||    
T  13890043 agagtttttctacttgcaccctaattaatcatggttgcaccccaaaataacaagattaccctttcataaaatttgattttcaaaaagcct 13889954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 257
Target Start/End: Complemental strand, 29630583 - 29630494
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    ||||||||||| || || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||    
T  29630583 ttagagtttttttacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 29630494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 7141263 - 7141351
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  | ||| ||||  ||||| |||| |||||||||||||||||||| |||||||||||||||    
T  7141263 gagtttttctacttgcaccctagttaatcatagttgcaccccaaaataacaagattatcctttcataaaatttgattttcaaaaagcct 7141351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 29122441 - 29122350
Alignment:
Q  170 agagtttttctaatt--acaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| ||  |||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  29122441 agagtttttctacttgcacaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 29122350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 13445463 - 13445402
Alignment:
Q  194 ttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    ||||| |||||| || | ||||||||||||||||  |||  |||||||||||||||||||||    
T  13445463 ttaatcctggttgcatcctaaaatgacaaaattactcttctataaaatttaattttcaaaaa 13445402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 263
Target Start/End: Original strand, 8719 - 8810
Alignment:
Q  172 agtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||||||| ||||| |||||| || |||||||| |||||||||  ||| |||||||||||||||||||||||| |||||    
T  8719 agtttttctaattacaccctgtttaatcctggttgcatcttaaaataacaaaattactcttccataaaatttaattttcaaaaagcatcttc 8810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 13861 - 13950
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| |||| ||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  13861 agagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 13950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 365935 - 365843
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||| || ||||||||| ||||| |||||| ||||| || |||||||||| | | || |||||||||||||||||||||||| |||||    
T  365935 gagtttttcaaactacaccctgtttaattctggttgcacctcaacatgacaaaatgacctttccataaaatttaattttcaaaaagcatcttc 365843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 2202 - 2112
Alignment:
Q  168 ttagagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcc 258  Q
    |||||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| ||||||||||||||    
T  2202 ttagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcc 2112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 3831 - 3742
Alignment:
Q  174 tttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    ||||||||||||||||| |  || | |||||||||||  ||||||| |||||||||||| |||||||||| ||||| ||||||| |||||    
T  3831 tttttctaattacaccccgtatattcctggttacaccccaaaatgataaaattatccttacataaaatttgattttgaaaaagcatcttc 3742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 3874 - 3963
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  3874 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 3963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 12520 - 12608
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  12520 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 12608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 14134 - 14045
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  ||||| | || |||||||||||||||||||| |||||||||||||||    
T  14134 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaattataagattatcctttcataaaatttgattttcaaaaagcct 14045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 157199 - 157111
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcct 259  Q
    ||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  157199 gagtttttctacttgcaccctagttaatcatggttgcaccaaaaaatgacaagattaccctttcataaaatttgattttcaaaaagcct 157111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 255
Target Start/End: Original strand, 200033 - 200117
Alignment:
Q  171 gagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaa 255  Q
    |||||||| |||||||| |||| ||||| |||| | || |  ||||||||||||||| |||| ||||||||||||||||||||||    
T  200033 gagtttttttaattacatcctgtttaatcctggatgcatcccaaaatgacaaaattacccttccataaaatttaattttcaaaaa 200117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 3109 - 3022
Alignment:
Q  170 agagtttttctaattacaccctgcttaatactggttacaccttaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 257  Q
    |||||||||||| || ||||||  |||||  ||||| ||||  |||||||||| |||| ||||| ||||||||| |||||||||||||    
T  3109 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattacccttttataaaatttgattttcaaaaagc 3022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 13535 - 13584
Alignment:
Q  214 aaatgacaaaattatcctttcataaaatttaattttcaaaaagcctcttc 263  Q
    |||||| |||||||||||| |||||||| || ||||||||||||||||||    
T  13535 aaatgagaaaattatccttccataaaatatagttttcaaaaagcctcttc 13584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University