View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4270_low_51 (Length: 226)
Name: NF4270_low_51
Description: NF4270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4270_low_51 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 30 - 226
Target Start/End: Original strand, 30975149 - 30975345
Alignment:
| Q |
30 |
aagtagttattttcgtgagaatttcttaccggcgatggtaggaaacaactcagcaaccaccgtcagccacctaccggaggagattttatcgaaagtcttc |
129 |
Q |
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| T |
30975149 |
aagtagttattttcgtgagaatttcttaccggtgatggtaggaaacaactcagcaaccaccgtcagccacctaccggaggagattttatcgaaagtcttc |
30975248 |
T |
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| Q |
130 |
accggaataactgacacacgaactcgaaattcactctccttagtatgtcatagcttcttcaagttagagagaaaaacgcgattatccctcacgctcc |
226 |
Q |
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| T |
30975249 |
accggaataactgacacacgaactcgaaactcactctccttagtatgtcatagcttcttcaagttagagagaaaaacgcgattatccctcacgctcc |
30975345 |
T |
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