View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4272_high_25 (Length: 261)
Name: NF4272_high_25
Description: NF4272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4272_high_25 |
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Alignment Details
Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 7 - 246
Target Start/End: Original strand, 39789008 - 39789247
Alignment:
| Q |
7 |
ggagcacagacaaaagtggatatgggtattgcctttaatgtctaatccacccatttgtttagcacaaattagaagttattgtctttaaagcatgttaata |
106 |
Q |
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| T |
39789008 |
ggagcacaaacaaaagtggatatgggtattgcctttaatgtctaatccacccatttgtttagcacaaattagaagttattgtctttaaagcatgttaata |
39789107 |
T |
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| Q |
107 |
agagtgtgactttgtggttttctaagttggaattactatgatctaagtccaataaagctggaagataaatacaagacatggaactcaatagactataaat |
206 |
Q |
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| T |
39789108 |
agagtgtgactttgtggttttctaagttggaattactatgatctaagtccaataaagctggaagatgaatacaagacatggaactcaatagactataaat |
39789207 |
T |
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| Q |
207 |
agtcacgaatttcattttctaataaaaaatagtcaaattt |
246 |
Q |
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| T |
39789208 |
agtcacgaatttcattttctaataaaaaatagtcaaattt |
39789247 |
T |
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