View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4272_high_29 (Length: 249)
Name: NF4272_high_29
Description: NF4272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4272_high_29 |
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Alignment Details
Target: chr8 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 10804998 - 10804759
Alignment:
| Q |
1 |
ctttgagatgcatatggttagttatttcttaatctaaaatttcatgtgttcattttgagaattttgtctttaggtagnnnnnnnnnnnnnatgtnnnnnn |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |
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| T |
10804998 |
ctttgagatgcatatggttagttatttcttaatctaaaatttcatgtgttcattttgagaattttgtctttagctagtttttttctttttatgtaaaaaa |
10804899 |
T |
|
| Q |
101 |
nnn-cacatgaaatctttggatattgtaagtcctgaagatagaaaaatgccaaaacagaatgttaacacaaagttaaaaagatggagaagtgtttatatt |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10804898 |
aaaacacatgaaatctttggatattgtaagtcctgaagatagaaaaatgccaaaacagaatgttaacacaaagttaaaaagatggagaagtgtttatatt |
10804799 |
T |
|
| Q |
200 |
ttcatctttatagccggtgctattgctcttctcctctctg |
239 |
Q |
| |
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|||||||||||||| |||||||||||||||||||| |||| |
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| T |
10804798 |
ttcatctttatagctggtgctattgctcttctcctttctg |
10804759 |
T |
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