View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4274_low_3 (Length: 416)

Name: NF4274_low_3
Description: NF4274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4274_low_3
NF4274_low_3
[»] chr7 (9 HSPs)
chr7 (101-375)||(42513062-42513346)
chr7 (196-375)||(41712265-41712442)
chr7 (108-299)||(38572287-38572488)
chr7 (200-375)||(49017102-49017277)
chr7 (225-377)||(30456307-30456458)
chr7 (251-375)||(6102928-6103053)
chr7 (225-375)||(30452702-30452847)
chr7 (253-365)||(11206499-11206611)
chr7 (324-380)||(4257360-4257416)
[»] chr5 (6 HSPs)
chr5 (101-375)||(8123394-8123678)
chr5 (101-366)||(671328-671603)
chr5 (225-375)||(24108697-24108848)
chr5 (248-375)||(41709523-41709650)
chr5 (280-375)||(10321869-10321963)
chr5 (101-182)||(41709389-41709470)
[»] chr3 (15 HSPs)
chr3 (108-375)||(36326375-36326640)
chr3 (101-312)||(30911921-30912142)
chr3 (101-327)||(55211736-55211968)
chr3 (279-377)||(14029381-14029479)
chr3 (175-301)||(32414686-32414816)
chr3 (101-184)||(14029173-14029256)
chr3 (241-315)||(33328220-33328294)
chr3 (334-375)||(19798051-19798092)
chr3 (334-375)||(19798296-19798337)
chr3 (338-375)||(1830902-1830939)
chr3 (334-375)||(18319509-18319550)
chr3 (344-376)||(30911612-30911644)
chr3 (338-377)||(30912148-30912187)
chr3 (99-158)||(32414500-32414559)
chr3 (338-379)||(32414918-32414959)
[»] chr1 (10 HSPs)
chr1 (101-375)||(18583886-18584170)
chr1 (225-375)||(23405475-23405625)
chr1 (101-219)||(13087573-13087700)
chr1 (281-375)||(21075941-21076035)
chr1 (248-373)||(13087701-13087825)
chr1 (112-176)||(21076184-21076248)
chr1 (281-375)||(16544437-16544529)
chr1 (249-326)||(9893767-9893844)
chr1 (301-375)||(25541115-25541184)
chr1 (226-271)||(24618436-24618481)
[»] chr6 (9 HSPs)
chr6 (112-375)||(33242726-33242998)
chr6 (107-375)||(4834589-4834869)
chr6 (112-375)||(7415516-7415789)
chr6 (112-375)||(7422524-7422797)
chr6 (112-378)||(7426463-7426739)
chr6 (267-375)||(13886583-13886691)
chr6 (101-182)||(13886454-13886535)
chr6 (15-73)||(30513296-30513355)
chr6 (342-375)||(16389217-16389250)
[»] chr4 (11 HSPs)
chr4 (241-375)||(36050680-36050813)
chr4 (241-375)||(36053939-36054072)
chr4 (225-376)||(27387620-27387771)
chr4 (243-375)||(55322334-55322467)
chr4 (225-373)||(12638012-12638158)
chr4 (235-375)||(24733626-24733766)
chr4 (135-265)||(20441029-20441168)
chr4 (101-182)||(36050519-36050600)
chr4 (101-182)||(36053778-36053859)
chr4 (342-376)||(10129631-10129665)
chr4 (225-292)||(45736016-45736084)
[»] chr2 (8 HSPs)
chr2 (225-359)||(45327420-45327554)
chr2 (270-375)||(31211858-31211963)
chr2 (294-366)||(31193246-31193318)
chr2 (144-267)||(31211598-31211731)
chr2 (326-375)||(40400909-40400958)
chr2 (101-184)||(4472702-4472785)
chr2 (226-347)||(28860754-28860873)
chr2 (225-276)||(40400997-40401048)
[»] chr8 (10 HSPs)
chr8 (241-375)||(44761983-44762117)
chr8 (241-376)||(44765290-44765425)
chr8 (279-373)||(11825056-11825148)
chr8 (295-373)||(23090074-23090152)
chr8 (312-373)||(1495750-1495811)
chr8 (101-182)||(44765129-44765210)
chr8 (101-156)||(24249050-24249105)
chr8 (342-376)||(32519622-32519656)
chr8 (100-182)||(44761822-44761904)
chr8 (252-316)||(14276620-14276685)


Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 101 - 375
Target Start/End: Complemental strand, 42513346 - 42513062
Alignment:
Q  101 tgatatgatatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaagg----------tctatt 190  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||          ||||||    
T  42513346 tgataggatatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgactcaccttaatctagaaggatctagaaggtctatt 42513247  T
Q  191 gttaggggatgatattgagtatgttagggtacacttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaa 290  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42513246 gttaggggataatattgagtatgttagggtacacttatcttattatgagtatgcacaagtctatataagcattgtatgctttattatgagaatcaatgaa 42513147  T
Q  291 aagtataatgaatttcctttcttttatctctagttt-tctctcttaatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    || |||||||||||| |||||| || |||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||    
T  42513146 aaatataatgaattttctttctcttttctctagtttctccctc-taatttctggagtgtgatccctactcgaattgggtcgtatca 42513062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 196 - 375
Target Start/End: Original strand, 41712265 - 41712442
Alignment:
Q  196 gggatgatattgagtatgttagggtacacttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagta 295  Q
    ||||| ||||| ||||||||||||| ||||||| |||||||||| | ||||||||||||||||| |||||||| |||||||||||||| ||||||||  |    
T  41712265 gggataatattaagtatgttagggtgcacttattttattatgagtaggcacaagtctatataagtattgtatgtcttattatgagaatgaatgaaaa--a 41712362  T
Q  296 taatgaatttcctttcttttatctctagttttctctcttaatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    |||  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  41712363 taacaaatttcctttcttttgtctctagttttctctcttaatttttggagtgtgatccttactcgaattgggtcgtatca 41712442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 108 - 299
Target Start/End: Complemental strand, 38572488 - 38572287
Alignment:
Q  108 atatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatcta----------gaaggtctattgttaggg 197  Q
    ||||||||||||| ||| ||||||||| ||||||| |||||||||||||||||||||| |||||||||||||          |||||| | |||||||||    
T  38572488 atatttagaataatgagtactaatgtgctgactcagctagttctagaagttattatgactcaccttaatctaaaaggatctagaaggtatcttgttaggg 38572389  T
Q  198 gatgatattgagtatgttagggtacacttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtata 297  Q
    ||| |||||||||| ||||||||||||||||||||||||||  |||| ||||||||||||| |||||||||||||||||||||||| ||| |||| ||||    
T  38572388 gataatattgagtaagttagggtacacttatcttattatgaatatgcccaagtctatataaacattgtatgccttattatgagaattaataaaaaatata 38572289  T
Q  298 at 299  Q
    ||    
T  38572288 at 38572287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 200 - 375
Target Start/End: Original strand, 49017102 - 49017277
Alignment:
Q  200 tgatattgagtatgttagggtacacttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataat 299  Q
    ||||||||||||||||| | | |||||||||||||||||  || ||||||| | |||||||||||||||||||||||||||| | |||||||| ||||||    
T  49017102 tgatattgagtatgttatgatgcacttatcttattatgactatccacaagtttgtataagcattgtatgccttattatgagacttaatgaaaaatataat 49017201  T
Q  300 gaatttcctttcttttatctctagttt-tctctcttaatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
      |||| |||||||||||||||||||| |||||| |||||| |||||||||||||||| ||||||| ||||||||||    
T  49017202 atattttctttcttttatctctagtttctctctc-taatttatggagtgtgatccctattcgaattaggtcgtatca 49017277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 225 - 377
Target Start/End: Original strand, 30456307 - 30456458
Alignment:
Q  225 ttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatgaatttcctttcttttatctctagt 324  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||||||| || ||||  |||||||| |||||||||||| |||||| || ||||||||    
T  30456307 ttatcttattatgagtatgca-aagtctatataagcattatatgccttatgattagaacgaatgaaaaatataatgaattttctttctcttttctctagt 30456405  T
Q  325 tt-tctctcttaatttctggagtgtgatccctactcgaattgggtcgtatcaga 377  Q
    || || ||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  30456406 ttctccctc-taaattctggagtgtgatccctactcgaattgggtcgtatcaga 30456458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 251 - 375
Target Start/End: Original strand, 6102928 - 6103053
Alignment:
Q  251 ctatataagcattgtatgccttattatgagaatcaatgaaaagtataatgaatttccttt-cttttatctctagttttctctcttaatttctggagtgtg 349  Q
    |||||||||||||||||   | || || |||||||||||||| ||||||||||||  ||| ||||||||||||||||||||||||||||| |||||||||    
T  6102928 ctatataagcattgtatctttcatgattagaatcaatgaaaaatataatgaattttttttgcttttatctctagttttctctcttaatttatggagtgtg 6103027  T
Q  350 atccctactcgaattgggtcgtatca 375  Q
    || |||||||||||||||| ||||||    
T  6103028 attcctactcgaattgggttgtatca 6103053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 225 - 375
Target Start/End: Original strand, 30452702 - 30452847
Alignment:
Q  225 ttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatgaatttcctttcttttatctctagt 324  Q
    ||||||||||||||| ||||| |||||||||||    ||||||||||||| || ||||  |||||||| |||||||||||| |||||| || ||||||||    
T  30452702 ttatcttattatgagtatgca-aagtctatata----ttgtatgccttatgattagaacgaatgaaaaatataatgaattttctttctcttttctctagt 30452796  T
Q  325 tttctctct-taatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    || ||| || ||| ||||||||||||||||||||||||||||||||||||||    
T  30452797 tt-ctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 30452847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 253 - 365
Target Start/End: Original strand, 11206499 - 11206611
Alignment:
Q  253 atataagcattgtatgccttattatgagaatcaatgaaaagtataatgaatttcctttcttttatctctagttt-tctctcttaatttctggagtgtgat 351  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||| || |||||||||| || ||| ||| ||||||||||||||    
T  11206499 atataaacattgtatgccttattatgagaatcaatgaaaaatataatgaattttctttctcttttctctagtttctccctc-taaattctggagtgtgat 11206597  T
Q  352 ccctactcgaattg 365  Q
    | ||||||||||||    
T  11206598 ctctactcgaattg 11206611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 4257416 - 4257360
Alignment:
Q  324 ttttctctcttaatttctggagtgtgatccctactcgaattgggtcgtatcagagtg 380  Q
    |||| |||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  4257416 ttttatctcttaatttctggagtgtgatccctactcatattgggtcgtatcagagtg 4257360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 171; Significance: 1e-91; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 101 - 375
Target Start/End: Original strand, 8123394 - 8123678
Alignment:
Q  101 tgatatgatatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaagg----------tctatt 190  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||          ||||||    
T  8123394 tgataggatatttagaataaggagcactaatctggtgactcatctagttctagaagttattatgactgaccttaatctagaaggatctagaagatctatt 8123493  T
Q  191 gttaggggatgatattgagtatgttagggtacacttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaa 290  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8123494 gttaggggataatattgagtatgttagggtacacttatcttattatgagtatgcacaagtctatataagcattgtatgctttattatgagaatcaatgaa 8123593  T
Q  291 aagtataatgaatttcctttcttttatctctagttt-tctctcttaatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    || |||||||||||| |||||| || ||| || ||| || ||| ||||||||| |||||||||| |||||||||||||||||||||    
T  8123594 aaatataatgaattttctttctcttttctttaatttctccctc-taatttctgaagtgtgatccatactcgaattgggtcgtatca 8123678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 101 - 366
Target Start/End: Original strand, 671328 - 671603
Alignment:
Q  101 tgatatgatatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaagg----------tctatt 190  Q
    ||||| |||||||||||||||||||| |||| | |||||||  ||| ||||||| |||||||||| ||||||||||||||||||          | ||||    
T  671328 tgataggatatttagaataaggagcattaatatagtgactcggctaattctagatgttattatgactcaccttaatctagaaggatccataagatatatt 671427  T
Q  191 gttaggggatgatattgagtatgttagggtacacttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaa 290  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||| ||||||    
T  671428 gttaggggataatattgagtaggttagggtacacttatcttattatgagtatgcacaagtttatataatcattgtatgccttattatgagaattaatgaa 671527  T
Q  291 aagtataatgaatttcctttcttttatctctagttttctctcttaatttctggagtgtgatccctactcgaattgg 366  Q
    || |||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  671528 aaatataatgaattttctttcttttatctctagctttctctcttaatttctgaagtgtgatcccaactcgaattgg 671603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 225 - 375
Target Start/End: Original strand, 24108697 - 24108848
Alignment:
Q  225 ttatcttattatgagcatgca-caagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatgaatttcctttcttttatctctag 323  Q
    |||| |||||||||| ||||| ||||||||||||||||||||||| ||||| || |||| ||||||||| |||||||||||||||||  ||| |||||||    
T  24108697 ttattttattatgagtatgcaacaagtctatataagcattgtatgtcttatgattagaaccaatgaaaaatataatgaatttccttttgtttgtctctag 24108796  T
Q  324 ttttctctcttaatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  24108797 ttttcttccttaatttctggagtgtgatccctactcgaattgggtcgtatca 24108848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 248 - 375
Target Start/End: Original strand, 41709523 - 41709650
Alignment:
Q  248 agtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatgaatttcctttcttttatctctagttt-tctctcttaatttctggagt 346  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||| || ||| |||||| || ||| ||| |||||||||    
T  41709523 agtctatataaacattgtatgccttattatgagaatcaatgaaaaatataatgaattttctttctcttttctatagtttctccctc-taaattctggagt 41709621  T
Q  347 gtgatccctactcgaattgggtcgtatca 375  Q
    |||||| ||||||||||||||||||||||    
T  41709622 gtgatctctactcgaattgggtcgtatca 41709650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 280 - 375
Target Start/End: Complemental strand, 10321963 - 10321869
Alignment:
Q  280 gaatcaatgaaaagtataatgaatttcctttcttttatctctagttt-tctctcttaatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    |||||||||||||  |||||||||||||||||| |||||||||| || ||||||| ||||  ||||||||||||||||||| |||||||||||||||    
T  10321963 gaatcaatgaaaaa-ataatgaatttcctttctcttatctctagcttatctctctaaatta-tggagtgtgatccctactcaaattgggtcgtatca 10321869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 41709389 - 41709470
Alignment:
Q  101 tgatatgatatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaa 182  Q
    ||||| ||||| |||||||||||  |  ||||||||||||| |||||||||||||| || ||||| ||| ||||||||||||    
T  41709389 tgataggatatctagaataaggaatataaatgtggtgactcctctagttctagaaggtagtatgactcatcttaatctagaa 41709470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 170; Significance: 4e-91; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 108 - 375
Target Start/End: Original strand, 36326375 - 36326640
Alignment:
Q  108 atatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaaggtctattgttaggggatgatattg 207  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| | |||||||||||||||||||    
T  36326375 atatttagaataatgagtattaatgtggtgactcatctagttctagaagttattatgactcacattaatctagaaggtatcttgttaggggatgatattg 36326474  T
Q  208 agtatgttagggtacacttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatgaatttcc 307  Q
    ||||||||||||| ||||||  |||||||||| |||  |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |    
T  36326475 agtatgttagggtgcacttaggttattatgagtatg--caagtctatataagcattgtatgctttattatgagaatcaatgaaaaatataatgaattttc 36326572  T
Q  308 tttcttttatctctagttt-tctctcttaatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    ||||| || |||||||||| || ||| ||| ||||||||||||||||||||||||||||||||||||||    
T  36326573 tttctcttttctctagtttctccctc-taaattctggagtgtgatccctactcgaattgggtcgtatca 36326640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 101 - 312
Target Start/End: Original strand, 30911921 - 30912142
Alignment:
Q  101 tgatatgatatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaagg-tcta---------tt 190  Q
    ||||| |||| ||||||||| ||| ||||||||| ||||||   ||||||||||||||||||||| |||||||||||||||||| ||||         ||    
T  30911921 tgataggatacttagaataatgagtactaatgtgatgactcggttagttctagaagttattatgactcaccttaatctagaaggatctaaaatatatctt 30912020  T
Q  191 gttaggggatgatattgagtatgttagggtacacttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaa 290  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30912021 gttaggggataatattgagtatgttagggtgcacttattttattgtgagtatgcacaagtctatataagtattgtatgccttattatgagaatcaatgaa 30912120  T
Q  291 aagtataatgaatttcctttct 312  Q
    || |||||||||||| ||||||    
T  30912121 aaatataatgaattttctttct 30912142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 101 - 327
Target Start/End: Complemental strand, 55211968 - 55211736
Alignment:
Q  101 tgatatgatatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaagg----------tctatt 190  Q
    ||||| ||||||||||||||||||||||||||||| |||||  ||||||||| ||||||| | || ||| ||||||||| ||||          | ||||    
T  55211968 tgataggatatttagaataaggagcactaatgtggcgactcggctagttctaaaagttatcacgactcatcttaatctaaaaggatccataaggtatatt 55211869  T
Q  191 gttaggggatgatattgagtatgttagggtacacttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaa 290  Q
    | |||||||| ||||||||||||||||||| |||||||||||||||||  ||||||||||||||||     |||||||||||||||||||||||||||||    
T  55211868 ggtaggggataatattgagtatgttagggtgcacttatcttattatgaatatgcacaagtctatat-----ttgtatgccttattatgagaatcaatgaa 55211774  T
Q  291 aagtataatgaatttcctt-tcttttatctctagtttt 327  Q
    || ||||||||||||  || ||| ||||||||||||||    
T  55211773 aaatataatgaatttatttctctcttatctctagtttt 55211736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 279 - 377
Target Start/End: Original strand, 14029381 - 14029479
Alignment:
Q  279 agaatcaatgaaaagtataatgaatttcctttcttttatctctagttt-tctctcttaatttctggagtgtgatccctactcgaattgggtcgtatcaga 377  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| || ||| ||| |||||||||||||||||||||||||||||| |||||||||    
T  14029381 agaatcaatgaaaaatataatgaatttcctttcttttatctctagtttctcactc-taaattctggagtgtgatccctactcgaattgggccgtatcaga 14029479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 175 - 301
Target Start/End: Original strand, 32414686 - 32414816
Alignment:
Q  175 atctagaaggtctattgttaggggatgatattgagtatgttagggtacacttatcttattatgagcatgc----acaagtctatataagcattgtatgcc 270  Q
    ||||||||||| ||||||  |||||| ||||| ||||||||| ||| ||||||||||||| ||||  |||    |||||||||||||| |||||||||||    
T  32414686 atctagaaggtatattgtctggggataatattaagtatgttatggtgcacttatcttattttgagtttgcacaaacaagtctatataaacattgtatgcc 32414785  T
Q  271 ttattatgagaatcaatgaaaagtataatga 301  Q
    |||||| |||||||||| |||| ||||||||    
T  32414786 ttattacgagaatcaataaaaaatataatga 32414816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 14029173 - 14029256
Alignment:
Q  101 tgatatgatatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaagg 184  Q
    ||||| ||||||||||||||| ||||| |||| ||||||||  ||||||||||||| ||  |||| ||| ||||||||||||||    
T  14029173 tgataagatatttagaataagaagcacaaatgcggtgactcggctagttctagaaggtagaatgaatcatcttaatctagaagg 14029256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 241 - 315
Target Start/End: Original strand, 33328220 - 33328294
Alignment:
Q  241 atgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatgaatttcctttctttt 315  Q
    ||||| |||||| |||||||||||||||| |||| || |||| ||||||||  |||||| |||||||||||||||    
T  33328220 atgcataagtctgtataagcattgtatgctttataattagaaccaatgaaagatataatcaatttcctttctttt 33328294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 19798092 - 19798051
Alignment:
Q  334 taatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  19798092 taatttctggagtgtgatccctactcgaatcgggtcgtatca 19798051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 19798337 - 19798296
Alignment:
Q  334 taatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  19798337 taatttctggagtctgatccctactcgaattgggtcgtatca 19798296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 338 - 375
Target Start/End: Original strand, 1830902 - 1830939
Alignment:
Q  338 ttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  1830902 ttctggagtgtgatccctacttgaattgggtcgtatca 1830939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 18319509 - 18319550
Alignment:
Q  334 taatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    |||||||| ||||||||||||||||||||| |||||||||||    
T  18319509 taatttctagagtgtgatccctactcgaatcgggtcgtatca 18319550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 376
Target Start/End: Complemental strand, 30911644 - 30911612
Alignment:
Q  344 agtgtgatccctactcgaattgggtcgtatcag 376  Q
    |||||||||||||||||||||||||||||||||    
T  30911644 agtgtgatccctactcgaattgggtcgtatcag 30911612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 377
Target Start/End: Original strand, 30912148 - 30912187
Alignment:
Q  338 ttctggagtgtgatccctactcgaattgggtcgtatcaga 377  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  30912148 ttctggagtgtgatccgtactcgaattgagtcgtatcaga 30912187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 32414500 - 32414559
Alignment:
Q  99 tgtgatatgatatttagaataaggagcactaatgtggtgactcatctagttctagaagtt 158  Q
    ||||||| |||| |||||||||||| || ||||||||||||||| |||| | ||||||||    
T  32414500 tgtgataggatagttagaataaggaacattaatgtggtgactcagctagatttagaagtt 32414559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 379
Target Start/End: Original strand, 32414918 - 32414959
Alignment:
Q  338 ttctggagtgtgatccctactcgaattgggtcgtatcagagt 379  Q
    ||||||||||||||||||| |  |||||||||||||||||||    
T  32414918 ttctggagtgtgatccctatttaaattgggtcgtatcagagt 32414959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 166; Significance: 1e-88; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 101 - 375
Target Start/End: Complemental strand, 18584170 - 18583886
Alignment:
Q  101 tgatatgatatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaagg----------tctatt 190  Q
    ||||| |||||||||||||||||||| |||||||||| || | |||||| || |||||||||||| ||||||||||||||||||          | ||||    
T  18584170 tgataggatatttagaataaggagcattaatgtggtggcttagctagttataaaagttattatgactcaccttaatctagaaggatctaaaaggtatatt 18584071  T
Q  191 gttaggggatgatattgagtatgttagggtacacttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaa 290  Q
     ||||||||| ||||||||||||||||||| || ||||| |||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18584070 attaggggataatattgagtatgttagggtgcagttatcgtattataagtatgcacaagtctatataagcattgtatgctttattatgagaatcaatgaa 18583971  T
Q  291 aagtataatgaatttcctttcttttatctctagttttctctcttaatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    || |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  18583970 aaatatactgaatttcctttcttttatctctagttttctctcttaatttctggagtgtaatctctactcgaattgggtcgtatca 18583886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 225 - 375
Target Start/End: Complemental strand, 23405625 - 23405475
Alignment:
Q  225 ttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatgaatttcctttcttttatctctagt 324  Q
    |||||||| |||| | |||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||| || ||||||||    
T  23405625 ttatcttactatgtgtatgcacaagtctatctaaacattgtatgccttattatgagaatcaatgaaaaatataatgaattttctttctcttttctctagt 23405526  T
Q  325 tt-tctctcttaatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    || || ||| ||| ||||||||||||||||||||| ||||||||||||||||    
T  23405525 ttctccctc-taaattctggagtgtgatccctacttgaattgggtcgtatca 23405475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 101 - 219
Target Start/End: Original strand, 13087573 - 13087700
Alignment:
Q  101 tgatatgatatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcacctta---------atctagaaggtctattg 191  Q
    ||||| |||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||| ||||||||         ||||||||||| |||||    
T  13087573 tgataggatattcagaataaggagcattaatgtggtgactcggctagttctagaagttattatgactcaccttaatctagacgatctagaaggtatattg 13087672  T
Q  192 ttaggggatgatattgagtatgttaggg 219  Q
    ||||||||| |||| |||||||||||||    
T  13087673 ttaggggataatatcgagtatgttaggg 13087700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 281 - 375
Target Start/End: Complemental strand, 21076035 - 21075941
Alignment:
Q  281 aatcaatgaaaagtataatgaatttcctttcttttatctctagttttctctc-ttaatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    |||||||||||| |||| ||||||||||||||||||||| ||| ||||||||  ||| ||||||||||| ||||||||||||||| | ||||||||    
T  21076035 aatcaatgaaaaatatagtgaatttcctttcttttatctgtag-tttctctcgctaaattctggagtgtcatccctactcgaatttgatcgtatca 21075941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 248 - 373
Target Start/End: Original strand, 13087701 - 13087825
Alignment:
Q  248 agtctatataagcattgtatgccttattatgagaatcaatg-aaaagtataatgaatttcctttcttttatctctagttttctctcttaatttctggagt 346  Q
    |||||||||||| ||||||||||||||||||||||| |||| |||| || |||||||||  |||||||||||| ||    ||||||  || |||||||||    
T  13087701 agtctatataagtattgtatgccttattatgagaatgaatgaaaaaatacaatgaatttattttcttttatcttta-acctctctc-gaaattctggagt 13087798  T
Q  347 gtgatccctactcgaattgggtcgtat 373  Q
    ||||| |||| ||||||||||||||||    
T  13087799 gtgatacctattcgaattgggtcgtat 13087825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 21076248 - 21076184
Alignment:
Q  112 ttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaat 176  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||  | ||||| ||||||||||    
T  21076248 ttagaataaggagtactaatgtggtgactcacctagttctagaagcaaatatgattcaccttaat 21076184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 375
Target Start/End: Original strand, 16544437 - 16544529
Alignment:
Q  281 aatcaatgaaaagtataatgaatttcctttcttttatctctagttttctctcttaatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    ||||||||||||  |||| |||||||||||||||||||| |||||||||   |||||||||| ||||||||| ||| || |||| || |||||||    
T  16544437 aatcaatgaaaa--ataacgaatttcctttcttttatctttagttttcttctttaatttctgaagtgtgatcgctattcaaattaggccgtatca 16544529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 9893767 - 9893844
Alignment:
Q  249 gtctatataagcattgtatg-ccttattatgagaatcaatgaaaagtataatgaatttcctttcttttatctctagttt 326  Q
    ||||||||||||||| |||| ||| || ||| || |||||||||| |||||||||||| |||||||| |||||||||||    
T  9893767 gtctatataagcattttatgacctcataatggga-tcaatgaaaaatataatgaattttctttctttcatctctagttt 9893844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 375
Target Start/End: Complemental strand, 25541184 - 25541115
Alignment:
Q  301 aatttcctttcttttatctctagttttctctcttaatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    ||||| |||| |||||||||||||||||||||||     || ||||||||||||||||  ||||| |||||||||    
T  25541184 aattttcttttttttatctctagttttctctctt-----ctagagtgtgatccctacttaaattgtgtcgtatca 25541115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 24618481 - 24618436
Alignment:
Q  226 tatcttattatgagcatgcacaagtctatataagcattgtatgcct 271  Q
    |||||||||||||| ||| | ||||||||||||| |||||||||||    
T  24618481 tatcttattatgagtatgtataagtctatataagaattgtatgcct 24618436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 156; Significance: 9e-83; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 112 - 375
Target Start/End: Original strand, 33242726 - 33242998
Alignment:
Q  112 ttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaaggtct----------attgttaggggatg 201  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||| |||| |||| ||||  |          |||||||||||||     
T  33242726 ttagaataaggagcactaatatggtgactcagctagttctagaagttgttatgagtcatcttagtctataaggatttagaagacatattgttaggggata 33242825  T
Q  202 atattgagtatgttagggtacacttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatga 301  Q
    ||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33242826 atattgagtatgttagg-tgcacttatcttattatgagtatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaaatataatga 33242924  T
Q  302 atttcctttcttttatctctagttt-tctctcttaatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    ||||| |||||||||| |||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  33242925 atttcttttcttttatttctagtttctctctc-taatttctggagtgtgatctctactcgaattgggtcgtatca 33242998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 107 - 375
Target Start/End: Original strand, 4834589 - 4834869
Alignment:
Q  107 gatatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaagg-tcta-----------ttgtta 194  Q
    |||||||||||||| ||  || ||||||||||||||   |||||||||||||||||||| |||||||||||||||||| ||||           || |||    
T  4834589 gatatttagaataatgactacgaatgtggtgactcagtaagttctagaagttattatgactcaccttaatctagaaggatctaaaaggagtatcttatta 4834688  T
Q  195 ggggatgatattgagtatgttagggtacacttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagt 294  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||| |||||||||||||| |    
T  4834689 ggggataatattgagtatgttagggtgcacttatcttattatgagtatgcataagtctatataagcattgtatgcctcattattagaatcaatgaaaaat 4834788  T
Q  295 ataatgaatttcctttcttttatctctagttt-tctctcttaatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    ||||||||||| |||||| || |||||||||| || ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  4834789 ataatgaattttctttctcttttctctagtttctccctc-taaattctggagtgtgatccctactcaaattgggtcgtatca 4834869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 112 - 375
Target Start/End: Original strand, 7415516 - 7415789
Alignment:
Q  112 ttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaagg-tcta---------ttgttaggggatg 201  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||||  |||||||| ||| |||||| ||||||| ||||         ||||||||||||     
T  7415516 ttagaataatgagtactaatgtggtgactcagctagttctagaaaatattatgactcatcttaatttagaaggatctagaaattatcttgttaggggata 7415615  T
Q  202 atattgagtatgttagggtacacttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatga 301  Q
    ||||||||||||||| ||| |||||||||||||||||| |  || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7415616 atattgagtatgttatggtgcacttatcttattatgagtacacataagtctatataagcattgtatgccttattatgagaatcaatgaaaaatataatga 7415715  T
Q  302 atttcctttcttttatctctagttt-tctctcttaatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    |||| |||||| || |||||||||| |||||| |||||||||||||||||||||||||| | |||| ||||||||    
T  7415716 attttctttctcttttctctagtttctctctc-taatttctggagtgtgatccctactcaagttggatcgtatca 7415789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 112 - 375
Target Start/End: Original strand, 7422524 - 7422797
Alignment:
Q  112 ttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaagg-tcta---------ttgttaggggatg 201  Q
    ||||||||| ||| ||||||||||||||| | ||||||||||||  |||||||| ||| |||||| ||||||| ||||         ||||||||||||     
T  7422524 ttagaataatgagtactaatgtggtgacttagctagttctagaaaatattatgaatcatcttaatttagaaggatctagaagttatcttgttaggggata 7422623  T
Q  202 atattgagtatgttagggtacacttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatga 301  Q
    | ||||||||||||| ||| |||||||||||||| ||| |  || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7422624 acattgagtatgttatggtgcacttatcttattaagagtacacataagtctatataagcattgtatgccttattatgagaatcaatgaaaaatataatga 7422723  T
Q  302 atttcctttcttttatctctagttt-tctctcttaatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    |||| |||||| || |||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||    
T  7422724 attttctttctcttttctctagtttctctctc-taatttcttgagtgtgatccctactcgaattgggtcgtatca 7422797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 112 - 378
Target Start/End: Original strand, 7426463 - 7426739
Alignment:
Q  112 ttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaagg-tcta---------ttgttaggggatg 201  Q
    ||||||||| ||| | ||||||||||||||| ||||||||||||  |||||| | ||| |||||||||| ||| ||||         ||||||||||||     
T  7426463 ttagaataatgagtattaatgtggtgactcagctagttctagaaaatattataactcatcttaatctagtaggatctagaagttatcttgttaggggata 7426562  T
Q  202 atattgagtatgttagggtacacttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatga 301  Q
    ||||||||||||||| ||| |||||||||||||| ||| |  || |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  7426563 atattgagtatgttatggtgcacttatcttattaagagtacacataagtctatataaacattgtatgccttattatgagaatcaatgaaaaatataatga 7426662  T
Q  302 atttcctttcttttatctctagttt-tctctcttaatttctggagtgtgatccctactcgaattgggtcgtatcagag 378  Q
    |||| |||||| || |||||| ||| ||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  7426663 attttctttctcttttctctaatttctctttc-taatttctggagtgtgatccctactcgaattgggtcgtatcagag 7426739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 267 - 375
Target Start/End: Original strand, 13886583 - 13886691
Alignment:
Q  267 tgccttattatgagaatcaatgaaaagtataatgaatttcctttcttttatctctagttt-tctctcttaatttctggagtgtgatccctactcgaattg 365  Q
    ||||| ||||| |||||||||||||| |||||||||||| |||||| || |||||||||| || ||| ||| |||||||||||||||||||||| |||||    
T  13886583 tgcctcattattagaatcaatgaaaaatataatgaattttctttctcttttctctagtttctccctc-taaattctggagtgtgatccctactcaaattg 13886681  T
Q  366 ggtcgtatca 375  Q
    ||||||||||    
T  13886682 ggtcgtatca 13886691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 13886454 - 13886535
Alignment:
Q  101 tgatatgatatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaa 182  Q
    ||||| |||| ||||||||||||||||||||||||||||||  ||||||||| || ||||||||| ||||||||||||||||    
T  13886454 tgataggatagttagaataaggagcactaatgtggtgactctgctagttctataaattattatgactcaccttaatctagaa 13886535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 30513296 - 30513355
Alignment:
Q  15 tctcattcaacatttttcc-agattttgtcatctatccatccttcaaccagtgtcaatca 73  Q
    ||||||||||||||||| | |||||||| ||||||||  |||||||||||||||||||||    
T  30513296 tctcattcaacattttttctagattttgccatctatcattccttcaaccagtgtcaatca 30513355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 375
Target Start/End: Complemental strand, 16389250 - 16389217
Alignment:
Q  342 ggagtgtgatccctactcgaattgggtcgtatca 375  Q
    ||||||||||||||||||||||||||||||||||    
T  16389250 ggagtgtgatccctactcgaattgggtcgtatca 16389217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 241 - 375
Target Start/End: Original strand, 36050680 - 36050813
Alignment:
Q  241 atgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatgaatttcctttcttttatctctagttttctctcttaatttc 340  Q
    |||||||||||||||||| |||||||||||||||||||||    |||||||| ||||||||||||| |||||||||||||||||||||||| |||||||     
T  36050680 atgcacaagtctatataaacattgtatgccttattatgaggga-aatgaaaaatataatgaatttcttttcttttatctctagttttctcttttaatttt 36050778  T
Q  341 tggagtgtgatccctactcgaattgggtcgtatca 375  Q
    |||||||||||||||||||||||||||||||||||    
T  36050779 tggagtgtgatccctactcgaattgggtcgtatca 36050813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 241 - 375
Target Start/End: Original strand, 36053939 - 36054072
Alignment:
Q  241 atgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatgaatttcctttcttttatctctagttttctctcttaatttc 340  Q
    |||||||||||||||||| |||||||||||||||||||||    |||||||| ||||||||||||| |||||||||||||||||||||||| |||||||     
T  36053939 atgcacaagtctatataaacattgtatgccttattatgaggga-aatgaaaaatataatgaatttcttttcttttatctctagttttctcttttaatttt 36054037  T
Q  341 tggagtgtgatccctactcgaattgggtcgtatca 375  Q
    |||||||||||||||||||||||||||||||||||    
T  36054038 tggagtgtgatccctactcgaattgggtcgtatca 36054072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 225 - 376
Target Start/End: Original strand, 27387620 - 27387771
Alignment:
Q  225 ttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatgaatttcctttcttttatctctagt 324  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||||| || |  |||||||| ||||||||||||| |||| || |||||||||    
T  27387620 ttatcttattacgaggatgcacaagtctatataagcattgtatgcctcattattagcaggaatgaaaaatataatgaatttcttttccttcatctctagt 27387719  T
Q  325 tt-tctctcttaatttctggagtgtgatccctactcgaattgggtcgtatcag 376  Q
    || || ||| ||| |||||||||||||||||||||||||||||||||||||||    
T  27387720 ttctccctc-taaattctggagtgtgatccctactcgaattgggtcgtatcag 27387771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 243 - 375
Target Start/End: Complemental strand, 55322467 - 55322334
Alignment:
Q  243 gcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagta-taatgaatttcctttcttttatctctagttttctctcttaatttct 341  Q
    ||||||||||||||||||||||||||||| ||||| || || |||||||| || |||||||||||||||||||||||||||| ||   ||  ||| ||||    
T  55322467 gcacaagtctatataagcattgtatgcctcattattaggatgaatgaaaaataataatgaatttcctttcttttatctctagcttctacttctaaattct 55322368  T
Q  342 ggagtgtgatccctactcgaattgggtcgtatca 375  Q
    ||||||||||||||||||||||||||||||||||    
T  55322367 ggagtgtgatccctactcgaattgggtcgtatca 55322334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 225 - 373
Target Start/End: Original strand, 12638012 - 12638158
Alignment:
Q  225 ttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatgaatttcctttcttttatctctagt 324  Q
    ||||||||| ||||| || ||||||  |||| ||||||||||||||| || || | ||||||||||||  ||||  ||||||||||||||||| |||||     
T  12638012 ttatcttataatgaggatccacaagcttataaaagcattgtatgcctcatgataataatcaatgaaaa--ataacaaatttcctttcttttatatctaga 12638109  T
Q  325 tttctctcttaatttctggagtgtgatccctactcgaattgggtcgtat 373  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  12638110 tttctctcttaatttctggagtgcgatacctactcgaattgggtcgtat 12638158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 235 - 375
Target Start/End: Original strand, 24733626 - 24733766
Alignment:
Q  235 atgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatgaatttcctttcttttatctctagttttctctctt 334  Q
    |||||||| |||| | ||||||||||||||||||  | || || ||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  24733626 atgagcatccacatgcctatataagcattgtatgtttcatgattagaaggaatgaaaaatataatgaatttcctttcttttatatctagttttctctctt 24733725  T
Q  335 aatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    ||| |||  ||||||||||||||| ||||||||| ||||||    
T  24733726 aatatctaaagtgtgatccctacttgaattgggtggtatca 24733766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 135 - 265
Target Start/End: Complemental strand, 20441168 - 20441029
Alignment:
Q  135 gtgactcatctagttctagaagttattatgagtcaccttaatctagaaggtcta---------ttgttaggggatgatattgagtatgttagggtacact 225  Q
    ||||| || ||||||||||||||| |||||| |||||||||| |||||| ||||         |||||| ||||| |||||||| |||| ||||| ||||    
T  20441168 gtgacgcagctagttctagaagttgttatgactcaccttaatttagaagatctaaaaagtatattgttaagggataatattgagcatgtcagggtgcact 20441069  T
Q  226 tatcttattatgagcatgcacaagtctatataagcattgt 265  Q
    |||||||||||||| |||||||||||| || |||||||||    
T  20441068 tatcttattatgagtatgcacaagtctgtacaagcattgt 20441029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 36050519 - 36050600
Alignment:
Q  101 tgatatgatatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaa 182  Q
    ||||| |||||||||||||| ||| ||||||||||||||||  ||||||||||||| || ||||| ||| ||||||||||||    
T  36050519 tgataggatatttagaataatgagtactaatgtggtgactcccctagttctagaaggtagtatgactcatcttaatctagaa 36050600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 36053778 - 36053859
Alignment:
Q  101 tgatatgatatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaa 182  Q
    ||||| |||||||||||||| ||| ||||||||||||||||  ||||||||||||| || ||||| ||| ||||||||||||    
T  36053778 tgataggatatttagaataatgagtactaatgtggtgactcccctagttctagaaggtagtatgactcatcttaatctagaa 36053859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 376
Target Start/End: Complemental strand, 10129665 - 10129631
Alignment:
Q  342 ggagtgtgatccctactcgaattgggtcgtatcag 376  Q
    |||||||||||||||||||||||||||||||||||    
T  10129665 ggagtgtgatccctactcgaattgggtcgtatcag 10129631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 292
Target Start/End: Original strand, 45736016 - 45736084
Alignment:
Q  225 ttatcttattatgagcatgcacaagtctatataagcattgtatgccttat-tatgagaatcaatgaaaa 292  Q
    |||| ||||||||||||| ||||| |||| ||||||||||||||||| ||  || ||||||||||||||    
T  45736016 ttatattattatgagcattcacaaatctacataagcattgtatgcctcatagattagaatcaatgaaaa 45736084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 225 - 359
Target Start/End: Complemental strand, 45327554 - 45327420
Alignment:
Q  225 ttatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatgaatttcctttcttttatctctagt 324  Q
    |||||||| |||| | |||||||||||||||||||||||||||| |||||||||||||  |||||||| |||||| |||||| ||||||||||||||| |    
T  45327554 ttatcttactatgtgtatgcacaagtctatataagcattgtatgtcttattatgagaaaaaatgaaaaatataataaatttcttttcttttatctctaat 45327455  T
Q  325 tttctctcttaatttctggagtgtgatccctactc 359  Q
    |||||||||||||||||||||||||||||||||||    
T  45327454 tttctctcttaatttctggagtgtgatccctactc 45327420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 31211858 - 31211963
Alignment:
Q  270 cttattatgagaatcaatgaaaagtataatgaatttcctttcttttatctctagttttctctcttaatttctggagtgtgatccctactcgaattgggtc 369  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  31211858 cttattatgagaatcaatgaaaaatataatgaattttctttcttttatctctagttttctctcttaatttctggagtgtgatccctactcgaattggatc 31211957  T
Q  370 gtatca 375  Q
    ||||||    
T  31211958 gtatca 31211963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 366
Target Start/End: Original strand, 31193246 - 31193318
Alignment:
Q  294 tataatgaatttcctttcttttatctctagttttctctcttaatttctggagtgtgatccctactcgaattgg 366  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31193246 tataataaattttctttctttcatctctagttttctctcttaatttctagagtgtgatccctactcgaattgg 31193318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 144 - 267
Target Start/End: Original strand, 31211598 - 31211731
Alignment:
Q  144 ctagttctagaagttattatgagtcaccttaatctagaagg----------tctattgttaggggatgatattgagtatgttagggtacacttatcttat 233  Q
    ||||||||||||||| |||||| |||| |||||||||||||          | |||||||||||||| |||||||||||||||| || |||||||||||     
T  31211598 ctagttctagaagttgttatgactcactttaatctagaaggatttagaagatatattgttaggggataatattgagtatgttagagtgcacttatcttaa 31211697  T
Q  234 tatgagcatgcacaagtctatataagcattgtat 267  Q
    |||||| ||||| ||||||||||||| |||||||    
T  31211698 tatgagtatgcataagtctatataagtattgtat 31211731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 375
Target Start/End: Complemental strand, 40400958 - 40400909
Alignment:
Q  326 ttctctcttaatttctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    |||||||| ||||||||||||||||||||||||||||||| ||| |||||    
T  40400958 ttctctctaaatttctggagtgtgatccctactcgaattgagtcatatca 40400909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 4472702 - 4472785
Alignment:
Q  101 tgatatgatatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaagg 184  Q
    ||||| |||| ||| ||||||||||| | || |||||||||| |||||||||||||  |  |||| ||||||||||||||||||    
T  4472702 tgataggatagttaaaataaggagcatttatatggtgactcacctagttctagaagcaaagatgattcaccttaatctagaagg 4472785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 347
Target Start/End: Original strand, 28860754 - 28860873
Alignment:
Q  226 tatcttattatgagcatgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatgaatttcctttcttttatctctagtt 325  Q
    |||||||| ||||| || |||||  ||||| |||||  | |||||| || || | ||||||||||||  ||||  |||||  |||||| | |||||||||    
T  28860754 tatcttataatgaggatccacaaacctataaaagcaccgaatgcctcatgattaaaatcaatgaaaa--ataacaaattttatttcttctgtctctagtt 28860851  T
Q  326 ttctctcttaatttctggagtg 347  Q
    ||||||||||||||||||||||    
T  28860852 ttctctcttaatttctggagtg 28860873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 276
Target Start/End: Complemental strand, 40401048 - 40400997
Alignment:
Q  225 ttatcttattatgagcatgcacaagtctatataagcattgtatgccttatta 276  Q
    ||||||||| ||||| |||||||||||||| ||||||| |||||||| ||||    
T  40401048 ttatcttatcatgagtatgcacaagtctatttaagcatagtatgcctcatta 40400997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 241 - 375
Target Start/End: Original strand, 44761983 - 44762117
Alignment:
Q  241 atgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatgaatttcctttcttttatctctagttt-tctctcttaattt 339  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||  ||||| || ||| |||||| || ||| ||| ||    
T  44761983 atgcacaagtctatataaacattgtatgccttattatgaaaatcaatgaaaaatataatgaattttttttctcttttctatagtttctccctc-taaatt 44762081  T
Q  340 ctggagtgtgatccctactcgaattgggtcgtatca 375  Q
    ||||||||||||||||||||||||||||||||||||    
T  44762082 ctggagtgtgatccctactcgaattgggtcgtatca 44762117  T

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Target: chr8; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 241 - 376
Target Start/End: Original strand, 44765290 - 44765425
Alignment:
Q  241 atgcacaagtctatataagcattgtatgccttattatgagaatcaatgaaaagtataatgaatttcctttcttttatctctagttt-tctctcttaattt 339  Q
    |||||||||||||||||| |||||||| ||||||||||| |||||||||||| |||||||||||| |||||| || ||| |||||| || ||| ||| ||    
T  44765290 atgcacaagtctatataaacattgtattccttattatgaaaatcaatgaaaaatataatgaattttctttctcttttctatagtttctccctc-taaatt 44765388  T
Q  340 ctggagtgtgatccctactcgaattgggtcgtatcag 376  Q
    ||||||||| |||||||||||||||||||||||||||    
T  44765389 ctggagtgtaatccctactcgaattgggtcgtatcag 44765425  T

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Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 279 - 373
Target Start/End: Original strand, 11825056 - 11825148
Alignment:
Q  279 agaatcaatgaaaagtataatgaatttcctttcttttatctctagttttctctcttaatttctggagtgtgatccctactcgaattgggtcgtat 373  Q
    ||||| ||||||||  ||||| ||||||||||||||||||| || |||||||||||||||| |||||||||||||||| |||||||| |||||||    
T  11825056 agaatgaatgaaaa--ataatcaatttcctttcttttatctttaattttctctcttaatttatggagtgtgatccctattcgaattgagtcgtat 11825148  T

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Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 373
Target Start/End: Original strand, 23090074 - 23090152
Alignment:
Q  295 ataatgaatttcctttcttttatctctagttttctctcttaatttctggagtgtgatccctactcgaattgggtcgtat 373  Q
    ||||| ||||| |||||||||||||||  ||||||||| |||||| ||||||| ||| |||| || |||||||| ||||    
T  23090074 ataatcaattttctttcttttatctctgattttctctcataatttatggagtgcgattcctattcaaattgggttgtat 23090152  T

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Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 373
Target Start/End: Complemental strand, 1495811 - 1495750
Alignment:
Q  312 ttttatctctagttttctctcttaatttctggagtgtgatccctactcgaattgggtcgtat 373  Q
    |||||||||||||||||| || |||||| || |||| ||| |||| ||||||||||||||||    
T  1495811 ttttatctctagttttctttcataatttatgaagtgcgattcctattcgaattgggtcgtat 1495750  T

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Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 44765129 - 44765210
Alignment:
Q  101 tgatatgatatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaa 182  Q
    ||||| ||||| |||||||||||  |  |||||||||||||  ||||||||||||| || ||||| ||| ||||||||||||    
T  44765129 tgataggatatctagaataaggaatataaatgtggtgactcccctagttctagaaggtagtatgactcatcttaatctagaa 44765210  T

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Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 24249050 - 24249105
Alignment:
Q  101 tgatatgatatttagaataaggagcactaatgtggtgactcatctagttctagaag 156  Q
    ||||| |||||| | ||||||||||||| ||||||||| || ||||||||||||||    
T  24249050 tgataggatattcaaaataaggagcactcatgtggtgattcgtctagttctagaag 24249105  T

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Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 376
Target Start/End: Complemental strand, 32519656 - 32519622
Alignment:
Q  342 ggagtgtgatccctactcgaattgggtcgtatcag 376  Q
    |||||||||||||||||||||||||||| ||||||    
T  32519656 ggagtgtgatccctactcgaattgggtcctatcag 32519622  T

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Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 182
Target Start/End: Original strand, 44761822 - 44761904
Alignment:
Q  100 gtgatatgatatttagaataaggagcactaatgtggtgactcatctagttctagaagttattatgagtcaccttaatctagaa 182  Q
    |||||| ||||| |||||||||||  |  |||||||||||||  ||||||||||||| || | ||| ||| ||||||||||||    
T  44761822 gtgataggatatctagaataaggaatataaatgtggtgactcccctagttctagaaggtagtttgactcatcttaatctagaa 44761904  T

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Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 316
Target Start/End: Complemental strand, 14276685 - 14276620
Alignment:
Q  252 tatataagcattgta-tgccttattatgagaatcaatgaaaagtataatgaatttcctttctttta 316  Q
    ||||||||||||||| ||| | || || | |||||||||||| |||||| ||||||||||||||||    
T  14276685 tatataagcattgtaatgcttcatgattaaaatcaatgaaaaatataatcaatttcctttctttta 14276620  T

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