View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4275-Insertion-4 (Length: 230)
Name: NF4275-Insertion-4
Description: NF4275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4275-Insertion-4 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 11 - 230
Target Start/End: Complemental strand, 4998214 - 4997995
Alignment:
| Q |
11 |
ccaaaacctcggtggaactgagccggagaattcattgttctcgattcttacataatgaagagaatcacactcgccatactcattaggcataggcccagaa |
110 |
Q |
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| T |
4998214 |
ccaaaacctcggtggaactgagccggagaattcattgttctcgattcttacataatgaagagaatcacactcgccatactcattaggcataggcccagaa |
4998115 |
T |
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| Q |
111 |
aatcgatttttgaatgtgacgagtctttgaagttttttcttttgacagagaaactttggcaactctccaatgaagttattggttgaaacatcaagttctt |
210 |
Q |
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| T |
4998114 |
aatcgatttttgaatgtgacgagtctttgaagttttttcttttgacagagaaactttggtaactctccaatgaagttattggttgaaacatcaagttctt |
4998015 |
T |
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| Q |
211 |
gaatggaagagttttttcca |
230 |
Q |
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|||||||||||||||||||| |
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| T |
4998014 |
gaatggaagagttttttcca |
4997995 |
T |
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