View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4275_high_20 (Length: 234)
Name: NF4275_high_20
Description: NF4275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4275_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 46038549 - 46038770
Alignment:
| Q |
1 |
tatggtaaaatatttcatcaaaatgtccaacattaagagcaggattggccaaaataggacaagggatataacaaagaatcacatacatgagaaacaggaa |
100 |
Q |
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| T |
46038549 |
tatggtaaaatatttcatcaaaatgtccaacattaagagcaggattggccaaaataggacaagggatataacaaagaatcacatacatgagaaacaggaa |
46038648 |
T |
|
| Q |
101 |
gtttagtgaatgacacagaaaggtctgttaaagtttaatatggaagaatattaatattgtggtacaaatacacatgtcaatgccatgatacaccaaaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
46038649 |
gtttagtgaatgacacagaaaggtctgttaaagtttaatatggaagaatattaatattgtggcacaaatacacatgtcaatgccatgatacaccaaaatt |
46038748 |
T |
|
| Q |
201 |
tcaccaggtctatgttttatct |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
46038749 |
tcaccaggtctatgttttatct |
46038770 |
T |
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