View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4275_low_27 (Length: 213)
Name: NF4275_low_27
Description: NF4275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4275_low_27 |
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Alignment Details
Target: chr4 (Bit Score: 189; Significance: 1e-103; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-103
Query Start/End: Original strand, 3 - 195
Target Start/End: Complemental strand, 40283728 - 40283536
Alignment:
| Q |
3 |
aaacttaaagaaacctaggatgcatttggtatgttatttactattgagcacattttcgcttgtagattgacatactctcgatgattcctattgatacatc |
102 |
Q |
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| T |
40283728 |
aaacttaaagaaacctaggatgcatttggtatgttatttactattgagcacattttcgcttgtagattgacatactctcgatgattcctattgatacatc |
40283629 |
T |
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| Q |
103 |
gggagtttgaagggaggtgttagataatatgctattgcacttaggttgttggcccttttatatgtataagttagtagtctagtccttttagct |
195 |
Q |
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| T |
40283628 |
gggagtttgaagggaggtgttagataatatgctattgcacttaggttgttggcccttttatatttataagttagtagtctagtccttttagct |
40283536 |
T |
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