View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4277-Insertion-24 (Length: 165)
Name: NF4277-Insertion-24
Description: NF4277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4277-Insertion-24 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 139; Significance: 5e-73; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 139; E-Value: 5e-73
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 10467172 - 10467338
Alignment:
| Q |
1 |
gtttccgcaagtaagaagtctaccaataataactatcctcaatttgataaatcctaagtccaaaaa-tgtcatctctaccatcacccttacaaaaaa-ca |
98 |
Q |
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| T |
10467172 |
gtttccgcaaataagaagtctaccaataataactatcctcaatttgatgaatcctaagtccaaaaaatgtcatctctaccatcacccttacaaaaaaaca |
10467271 |
T |
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| Q |
99 |
tcctcaatttgttaaaagatactgtaccaactctacttctcattggcgtaactccactctccaccta |
165 |
Q |
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| T |
10467272 |
tcttcaatttgttaaaagatactgtaccaactctacttctcattggcgtaactccactctccaccta |
10467338 |
T |
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