View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4277_high_14 (Length: 239)
Name: NF4277_high_14
Description: NF4277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4277_high_14 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 5414146 - 5414366
Alignment:
| Q |
19 |
ctctgcccctacccctgcccactctcccttctgctacaaccttctgcatccgctatcacttaatggatgcagtcatgactggttatgtagtttctaatgc |
118 |
Q |
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| T |
5414146 |
ctctgcccctacccctgcccactctcccttctgctacaaccttctgcatccgctatcacttaatggatgcagtcatgactggttatgtagtttctaatgc |
5414245 |
T |
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| Q |
119 |
ggtatatgatgtccatacctaaaacatgcaaaatcacatatacatagtttctgatgcggtatatgatgtccatggctgaaacatgcaaaatcacatacac |
218 |
Q |
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| T |
5414246 |
ggtatatgatgtctatacctaaaacatgcaaaatcacatatacatagtttctgatgcggtatatgatgtccatgcctaaaacatgcaaaatcacatacac |
5414345 |
T |
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| Q |
219 |
atgcgacttacaataatccac |
239 |
Q |
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| T |
5414346 |
atgcgacttacaataatccac |
5414366 |
T |
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