View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4277_low_16 (Length: 250)
Name: NF4277_low_16
Description: NF4277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4277_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 20210217 - 20210452
Alignment:
| Q |
1 |
aattgaatatctagggtaccctccaaatgctgagtcactaagatgtctactttaggtggatatatggaagtnnnnnnnnnnnngggttctgcttgataaa |
100 |
Q |
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| T |
20210217 |
aattgaatatctagggtaccctccaaatgctgagtcactaagatgtctactttaggtggatctatggaagtaaaaacaaaaaagggttttgcttgataaa |
20210316 |
T |
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| Q |
101 |
gcatgtagcttggaccacaataattttacctaaagtagaattatgggaccatagaaacaaatcacaaaccttgctcatgtgtcatatgaatgtatgcaaa |
200 |
Q |
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|||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20210317 |
gcatttagtttggaccacaataattttacctaaagtagaattatgggaccatagaaacaaatcacaaaccttgctcatgtgtcatatgaatgtatgcaaa |
20210416 |
T |
|
| Q |
201 |
cttaggcctttcaaaccaatcattgctttccatagt |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
20210417 |
cttaggcctttcaaaccaatcattgctttccatagt |
20210452 |
T |
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