View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4278_low_8 (Length: 330)
Name: NF4278_low_8
Description: NF4278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4278_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 11 - 314
Target Start/End: Original strand, 15139528 - 15139831
Alignment:
| Q |
11 |
cataggcatgaaattaattcaatttatatgatatgactgcgttatcttacagtcttcatatgttttacataatgcagggattcgatactagaagattttc |
110 |
Q |
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| T |
15139528 |
cataggcatgaaattaattcaatttatatgatatgactgcgttatcttacagtcttcatatgttttacataatgcagggattcgatactagaagattttc |
15139627 |
T |
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| Q |
111 |
cctgtgctgaaaactcaaacaagtccttttacttttatcctgaaaaccaatgcagcaatacacctggtaataactctttttacacttttctatattttat |
210 |
Q |
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| T |
15139628 |
cctgtgctgaaaactcaaacaagtccttttacttttatcctgaaaaccaatgcagcaatacagctggtaataactctttttacacttttctatattttat |
15139727 |
T |
|
| Q |
211 |
tttgaataagttacctaaacaatttctatggtattgatgtacaaaattgcttaatacacatgcattcttttgtttctatcaggtgaactgcagaatgata |
310 |
Q |
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| T |
15139728 |
tgtgaataagttacctaaacaatttctatggtattgatgtacaaaattgcttaatacacatgcattcttttgtttctatcaggtgaactgcagaatgata |
15139827 |
T |
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| Q |
311 |
ttgc |
314 |
Q |
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|||| |
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| T |
15139828 |
ttgc |
15139831 |
T |
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