View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4279-Insertion-12 (Length: 142)
Name: NF4279-Insertion-12
Description: NF4279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4279-Insertion-12 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 119; Significance: 4e-61; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 119; E-Value: 4e-61
Query Start/End: Original strand, 6 - 142
Target Start/End: Original strand, 15630996 - 15631133
Alignment:
| Q |
6 |
aatacatgctttgcatctcgcaaagtanagtatcgctcattttggtgaatgccatagattgcacacgtaactagtttgataatatcaagtgctcgttagg |
105 |
Q |
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| T |
15630996 |
aatacatgctttgcatctcgcagagtaaagtatcgctcattttggtgaatgccatagattgcacacgtaactaatttgataatatcaagtgctcgttagg |
15631095 |
T |
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| Q |
106 |
gtattcatctccaagccaccaaggac-tttcccaccct |
142 |
Q |
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| T |
15631096 |
gtattcatctccaagccaccaaggacttttcccaccct |
15631133 |
T |
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