View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4279-Insertion-14 (Length: 139)
Name: NF4279-Insertion-14
Description: NF4279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4279-Insertion-14 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 139; Significance: 4e-73; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 139; E-Value: 4e-73
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 218154 - 218292
Alignment:
| Q |
1 |
cagacacgaatcttcttcaggaatcaacaccataaaactgtttcttctcaattccttgagcctcctctttacctcattggtaataaaatcatcatcgtcc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
218154 |
cagacacgaatcttcttcaggaatcaacaccataaaactgtttcttctcaattccttgagcctcctctttacctcattggtaataaaatcatcatcgtcc |
218253 |
T |
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| Q |
101 |
tcagcatcagcacaagaatctgcattttctgatttacac |
139 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
218254 |
tcagcatcagcacaagaatctgcattttctgatttacac |
218292 |
T |
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