View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4279_low_1 (Length: 1091)

Name: NF4279_low_1
Description: NF4279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4279_low_1
NF4279_low_1
[»] chr5 (40 HSPs)
chr5 (548-862)||(28521632-28521945)
chr5 (240-514)||(28521276-28521548)
chr5 (12-180)||(28520964-28521132)
chr5 (890-1073)||(28521950-28522133)
chr5 (544-617)||(41923209-41923282)
chr5 (547-618)||(3676471-3676542)
chr5 (552-618)||(2679842-2679908)
chr5 (553-617)||(9621898-9621962)
chr5 (557-621)||(29799701-29799765)
chr5 (555-621)||(15399877-15399943)
chr5 (547-621)||(17668087-17668161)
chr5 (556-618)||(18675679-18675741)
chr5 (547-621)||(19389781-19389855)
chr5 (556-621)||(13293937-13294002)
chr5 (554-621)||(35708715-35708782)
chr5 (551-621)||(38302311-38302381)
chr5 (556-618)||(43496837-43496899)
chr5 (556-621)||(1658240-1658305)
chr5 (556-621)||(1935060-1935125)
chr5 (556-621)||(3081285-3081350)
chr5 (556-621)||(4841662-4841727)
chr5 (556-621)||(6491247-6491312)
chr5 (556-621)||(37508343-37508408)
chr5 (561-621)||(12063939-12063999)
chr5 (547-621)||(344090-344162)
chr5 (556-618)||(6632712-6632773)
chr5 (548-618)||(8944100-8944170)
chr5 (563-621)||(12096973-12097031)
chr5 (556-618)||(14570006-14570068)
chr5 (556-618)||(15974403-15974465)
chr5 (556-618)||(38568334-38568395)
chr5 (556-621)||(9684744-9684809)
chr5 (556-621)||(10295546-10295611)
chr5 (556-621)||(15916946-15917011)
chr5 (556-621)||(17092960-17093025)
chr5 (556-613)||(18671075-18671132)
chr5 (556-621)||(27480125-27480190)
chr5 (556-621)||(33682435-33682500)
chr5 (547-616)||(35683431-35683500)
chr5 (348-417)||(37894444-37894513)
[»] chr2 (30 HSPs)
chr2 (877-967)||(40016455-40016545)
chr2 (547-619)||(28539381-28539453)
chr2 (556-621)||(11522133-11522198)
chr2 (556-621)||(13767481-13767546)
chr2 (919-986)||(7442480-7442547)
chr2 (556-619)||(16625759-16625822)
chr2 (549-621)||(12941750-12941824)
chr2 (556-618)||(39205080-39205142)
chr2 (556-609)||(31082868-31082921)
chr2 (556-621)||(36870306-36870371)
chr2 (557-621)||(9087418-9087482)
chr2 (556-616)||(21626188-21626248)
chr2 (554-621)||(8410883-8410950)
chr2 (547-618)||(35550114-35550185)
chr2 (554-621)||(40357518-40357585)
chr2 (557-616)||(43190507-43190566)
chr2 (558-621)||(44953973-44954036)
chr2 (547-621)||(4666189-4666263)
chr2 (556-618)||(14385143-14385205)
chr2 (559-621)||(31809471-31809533)
chr2 (556-621)||(3119805-3119870)
chr2 (556-621)||(4042027-4042092)
chr2 (548-621)||(8184114-8184187)
chr2 (556-621)||(12963924-12963989)
chr2 (556-621)||(13765892-13765957)
chr2 (580-621)||(26427619-26427660)
chr2 (556-621)||(36567231-36567296)
chr2 (557-618)||(37217019-37217080)
chr2 (556-621)||(44137198-44137263)
chr2 (556-621)||(44656703-44656768)
[»] scaffold0263 (1 HSPs)
scaffold0263 (556-618)||(12215-12277)
[»] chr7 (32 HSPs)
chr7 (556-618)||(38505300-38505362)
chr7 (548-622)||(41471493-41471567)
chr7 (547-621)||(14676284-14676358)
chr7 (556-618)||(43348195-43348257)
chr7 (556-621)||(1278001-1278066)
chr7 (556-621)||(33187800-33187865)
chr7 (554-621)||(38137992-38138059)
chr7 (554-621)||(46449233-46449300)
chr7 (554-621)||(47275955-47276022)
chr7 (556-618)||(13044210-13044272)
chr7 (556-618)||(17818349-17818411)
chr7 (556-618)||(33872076-33872138)
chr7 (556-618)||(35264848-35264910)
chr7 (547-621)||(38991426-38991500)
chr7 (556-618)||(42266963-42267025)
chr7 (556-618)||(43741758-43741820)
chr7 (556-621)||(21687496-21687561)
chr7 (556-621)||(25335370-25335435)
chr7 (558-619)||(38233691-38233752)
chr7 (556-621)||(41002204-41002269)
chr7 (556-621)||(43665122-43665187)
chr7 (556-608)||(30081035-30081087)
chr7 (557-621)||(31891340-31891403)
chr7 (547-618)||(2826203-2826274)
chr7 (563-621)||(4787956-4788014)
chr7 (557-618)||(4126025-4126086)
chr7 (556-621)||(5968006-5968071)
chr7 (557-618)||(10591860-10591921)
chr7 (556-621)||(23620747-23620811)
chr7 (556-621)||(38235857-38235922)
chr7 (556-621)||(43188920-43188985)
chr7 (556-621)||(45510405-45510470)
[»] chr6 (25 HSPs)
chr6 (556-618)||(33590285-33590347)
chr6 (548-619)||(20381821-20381892)
chr6 (548-618)||(19477311-19477381)
chr6 (548-621)||(13120375-13120448)
chr6 (549-618)||(26289607-26289676)
chr6 (549-621)||(15504754-15504826)
chr6 (556-620)||(25072485-25072549)
chr6 (555-618)||(28551851-28551914)
chr6 (556-621)||(2502319-2502384)
chr6 (556-621)||(8439348-8439413)
chr6 (547-616)||(12779567-12779636)
chr6 (544-621)||(34557125-34557202)
chr6 (557-621)||(4089350-4089414)
chr6 (347-407)||(9729814-9729874)
chr6 (557-621)||(31345324-31345388)
chr6 (554-621)||(27793560-27793627)
chr6 (547-618)||(32222056-32222127)
chr6 (556-619)||(33212383-33212446)
chr6 (556-618)||(33755102-33755164)
chr6 (556-621)||(1029356-1029421)
chr6 (556-621)||(4909868-4909933)
chr6 (547-621)||(15615721-15615791)
chr6 (556-621)||(24734943-24735008)
chr6 (556-621)||(26574348-26574413)
chr6 (556-621)||(26683380-26683445)
[»] scaffold0002 (1 HSPs)
scaffold0002 (556-617)||(90842-90903)
[»] chr4 (34 HSPs)
chr4 (552-621)||(21443081-21443150)
chr4 (556-621)||(52430528-52430593)
chr4 (557-621)||(40423026-40423090)
chr4 (554-621)||(32648957-32649024)
chr4 (556-621)||(6836463-6836528)
chr4 (556-621)||(37662706-37662771)
chr4 (556-621)||(49936565-49936630)
chr4 (558-621)||(28880056-28880119)
chr4 (554-621)||(42954669-42954736)
chr4 (556-618)||(368120-368182)
chr4 (559-621)||(48620355-48620417)
chr4 (556-618)||(55509940-55510002)
chr4 (556-621)||(16535754-16535819)
chr4 (556-621)||(27143241-27143306)
chr4 (556-621)||(38366090-38366155)
chr4 (556-621)||(46669898-46669963)
chr4 (556-621)||(52594579-52594644)
chr4 (556-619)||(8827775-8827838)
chr4 (554-619)||(3075721-3075784)
chr4 (557-618)||(32866686-32866748)
chr4 (555-621)||(37756676-37756742)
chr4 (556-618)||(50494610-50494672)
chr4 (556-621)||(3126965-3127030)
chr4 (556-621)||(7182144-7182209)
chr4 (556-621)||(8828163-8828228)
chr4 (556-621)||(13270016-13270081)
chr4 (556-621)||(21730280-21730345)
chr4 (556-621)||(32060709-32060774)
chr4 (556-621)||(38317181-38317246)
chr4 (556-617)||(42650699-42650760)
chr4 (557-618)||(45823609-45823670)
chr4 (556-621)||(47063745-47063810)
chr4 (556-621)||(47669873-47669938)
chr4 (556-621)||(49404576-49404641)
[»] chr1 (34 HSPs)
chr1 (548-621)||(27102777-27102850)
chr1 (556-621)||(43036276-43036341)
chr1 (554-621)||(50402802-50402869)
chr1 (552-621)||(12625776-12625846)
chr1 (557-621)||(25561271-25561335)
chr1 (556-618)||(20712172-20712234)
chr1 (556-618)||(50226093-50226155)
chr1 (556-621)||(2925888-2925953)
chr1 (548-621)||(35619467-35619540)
chr1 (549-621)||(36385394-36385467)
chr1 (557-618)||(39886880-39886941)
chr1 (556-621)||(41432715-41432780)
chr1 (556-621)||(42162006-42162071)
chr1 (562-619)||(42806239-42806296)
chr1 (557-621)||(6538022-6538086)
chr1 (556-616)||(17760443-17760503)
chr1 (554-618)||(32672654-32672718)
chr1 (556-620)||(49102926-49102990)
chr1 (558-621)||(19652248-19652311)
chr1 (558-621)||(24436885-24436948)
chr1 (557-621)||(40243425-40243491)
chr1 (556-618)||(28848755-28848817)
chr1 (556-618)||(33324686-33324748)
chr1 (557-619)||(33854794-33854856)
chr1 (557-619)||(33926066-33926128)
chr1 (556-618)||(36886932-36886994)
chr1 (556-621)||(896448-896513)
chr1 (556-621)||(23871416-23871481)
chr1 (556-621)||(32299165-32299230)
chr1 (556-621)||(33579316-33579381)
chr1 (556-621)||(36325778-36325843)
chr1 (556-621)||(47206377-47206442)
chr1 (556-621)||(47905642-47905707)
chr1 (556-621)||(51246527-51246592)
[»] chr8 (30 HSPs)
chr8 (547-618)||(43239723-43239794)
chr8 (556-618)||(14581714-14581776)
chr8 (548-618)||(41866083-41866153)
chr8 (556-621)||(32216-32281)
chr8 (556-621)||(1839773-1839838)
chr8 (556-621)||(7079947-7080012)
chr8 (556-621)||(27085411-27085476)
chr8 (549-617)||(4873199-4873267)
chr8 (557-621)||(41455323-41455387)
chr8 (548-615)||(13227765-13227832)
chr8 (548-619)||(39193986-39194057)
chr8 (551-621)||(13865045-13865115)
chr8 (556-618)||(29584237-29584299)
chr8 (551-621)||(29612049-29612119)
chr8 (556-621)||(10878735-10878800)
chr8 (556-621)||(16424201-16424266)
chr8 (556-621)||(31297301-31297366)
chr8 (556-621)||(34336093-34336158)
chr8 (548-620)||(35856484-35856556)
chr8 (566-621)||(22330763-22330818)
chr8 (556-619)||(31149965-31150028)
chr8 (556-618)||(12506152-12506214)
chr8 (556-621)||(1942006-1942071)
chr8 (556-621)||(2474720-2474785)
chr8 (556-621)||(3404527-3404592)
chr8 (556-621)||(13258549-13258614)
chr8 (556-621)||(26042255-26042320)
chr8 (556-621)||(32158828-32158893)
chr8 (556-621)||(34272578-34272643)
chr8 (547-619)||(39405113-39405186)
[»] chr3 (42 HSPs)
chr3 (560-618)||(3537273-3537331)
chr3 (556-621)||(39114917-39114982)
chr3 (556-619)||(29623299-29623362)
chr3 (547-621)||(23420755-23420829)
chr3 (555-621)||(27922023-27922089)
chr3 (555-621)||(39966831-39966897)
chr3 (555-621)||(46017267-46017333)
chr3 (556-621)||(47359372-47359438)
chr3 (556-618)||(49183748-49183810)
chr3 (549-618)||(1339855-1339924)
chr3 (548-621)||(13638482-13638554)
chr3 (556-621)||(19148230-19148295)
chr3 (558-615)||(30697429-30697486)
chr3 (556-621)||(35283150-35283215)
chr3 (556-621)||(48444568-48444633)
chr3 (556-621)||(52620788-52620853)
chr3 (556-621)||(53888550-53888615)
chr3 (558-618)||(16883410-16883470)
chr3 (544-620)||(32700374-32700450)
chr3 (557-621)||(40674171-40674235)
chr3 (560-618)||(30996142-30996201)
chr3 (565-616)||(33900673-33900724)
chr3 (554-621)||(44412108-44412175)
chr3 (558-621)||(46891451-46891514)
chr3 (558-621)||(49304273-49304336)
chr3 (568-618)||(19793419-19793469)
chr3 (556-618)||(34729293-34729355)
chr3 (548-618)||(35989161-35989231)
chr3 (556-618)||(37545241-37545303)
chr3 (551-621)||(41961930-41962000)
chr3 (556-621)||(2420722-2420787)
chr3 (548-621)||(15499252-15499325)
chr3 (556-609)||(27055869-27055922)
chr3 (556-621)||(32858893-32858958)
chr3 (556-621)||(39499261-39499326)
chr3 (556-621)||(43007475-43007540)
chr3 (556-621)||(46312373-46312438)
chr3 (556-621)||(47714626-47714691)
chr3 (556-621)||(47789399-47789464)
chr3 (556-621)||(54126323-54126388)
chr3 (556-621)||(54372529-54372594)
chr3 (579-620)||(54877762-54877803)
[»] scaffold0119 (1 HSPs)
scaffold0119 (547-618)||(37175-37246)
[»] scaffold0717 (1 HSPs)
scaffold0717 (556-621)||(1641-1706)
[»] scaffold0248 (1 HSPs)
scaffold0248 (556-616)||(154-214)
[»] scaffold0991 (1 HSPs)
scaffold0991 (556-618)||(3302-3363)
[»] scaffold0051 (4 HSPs)
scaffold0051 (556-614)||(3528-3586)
scaffold0051 (556-614)||(6717-6775)
scaffold0051 (556-614)||(7700-7758)
scaffold0051 (556-621)||(644-709)
[»] scaffold0028 (1 HSPs)
scaffold0028 (556-621)||(35408-35473)


Alignment Details
Target: chr5 (Bit Score: 249; Significance: 1e-138; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 548 - 862
Target Start/End: Original strand, 28521632 - 28521945
Alignment:
Q  548 ttttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatattaccttcttgagtaatgaaggaagcata 647  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| || ||||    
T  28521632 ttttaaaaggtttatatgaattcttgaagtttaatctatgttattataacattcttaaaattgaaaatatattacctttttgagtaatgaagaaaacata 28521731  T
Q  648 atattcttttaatgaaatctatcacctcattcaattttcaaccaaaatagacatagttgctaaccaaataaagtgagaaactttttctacatttttcact 747  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28521732 atattcttttaatgaaatctatcacctcattcgattttcaaccaaaatagacatagttgctaaccaaataaagtgagaaactttttctacatttttcact 28521831  T
Q  748 ttcaaaagtgagttnnnnnnntaagacaactctctttattataagcactttttaatttactacaaagtttgagtttatctcaagagtttatgagagttca 847  Q
    ||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  28521832 ttcaaaagtgagtt-aaaaaataagacaactctctttattataagcactttttaatttactacaaagtttgagtttatctgaagattttatgagagttca 28521930  T
Q  848 acccaaaacactaat 862  Q
    |||||||||||||||    
T  28521931 acccaaaacactaat 28521945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 176; E-Value: 3e-94
Query Start/End: Original strand, 240 - 514
Target Start/End: Original strand, 28521276 - 28521548
Alignment:
Q  240 aagtttagcacgattttgttcattaaaaccaataaacttttagcttatttgtttatgcagcaaattggcaagagacttgtgtttaaagtacaagctgcta 339  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||| |||||  ||    
T  28521276 aagtttagcacgattttgttcattaaaaccaacaaacttttagcttgtttgtttatgtagcaaattggcaagagacttgcgtttaaagtagaagctatta 28521375  T
Q  340 attgtaacttcacaattttcatgtttaaagtgcattggatagtggaaatgagcttctataagctaatctaaatacacactttaaattagctttatgcttt 439  Q
    |||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||     ||||||||||| |||    
T  28521376 attgtaacttcataattttcatgtttaaagtgaattggaaagtggaaatgagcttctataagctaatctaaatacacact-----ttagctttatgtttt 28521470  T
Q  440 tcgaaagttttacttgtgagttt---ggagaatagaagataggattttcaaataagaaagaatgagcaagtagaaagt 514  Q
    |||||||||||||||||||||||   ||||||||||||| || ||||| ||| ||||||||  |||||||||||||||    
T  28521471 tcgaaagttttacttgtgagtttcgaggagaatagaagagagaattttgaaacaagaaagatggagcaagtagaaagt 28521548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 161; E-Value: 3e-85
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 28520964 - 28521132
Alignment:
Q  12 agcaaaggtggtgtgatgtgagagatgaaggaaggaaagaatgaagttcagtgtgattgattctgtgagtttttgttgacggaattgaccttgtttaagg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28520964 agcaaaggtggtgtgatgtgagagatgaaggaaggaaagaatgaagttcagtgtgattgattctgtgagtttttgttgacggaattgaccttgtttaagg 28521063  T
Q  112 atttattaacggaattgtcctttggttagtggtaagagaaatgattgtagtaaaactaattttaacacg 180  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  28521064 atttattaacggaattgtcctttggctagtggtaagagaaatgattgtagcaaaactaattttaacacg 28521132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 890 - 1073
Target Start/End: Original strand, 28521950 - 28522133
Alignment:
Q  890 ttacattgttattctcgcgtctaaatgttatttagccgtagattttgagaagctacatattgtagctttaggttgaacgtgcggtgacgtcaactccatt 989  Q
    ||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28521950 ttacattgttattctcgcgtccaaatattatttagccgtggattttgagaagctacatattgtagctttaggttgaacgtgcggtgacatcaactccatt 28522049  T
Q  990 ggaaaaacaaacacatgctaagtcggatagtctcatgcataaagtaccacgttgaaaattaatatctatttgaaatgagattct 1073  Q
    | ||||||||||| |   ||| |||||||||||||||||||||||||||| ||||||| | | |||||||||||||||||||||    
T  28522050 gaaaaaacaaacatagattaattcggatagtctcatgcataaagtaccacattgaaaacttaaatctatttgaaatgagattct 28522133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 544 - 617
Target Start/End: Original strand, 41923209 - 41923282
Alignment:
Q  544 agaattttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatat 617  Q
    ||||||||||| |||||||||||||||||||| | ||||||||||| |||||| |||||||| ||| |||||||    
T  41923209 agaattttgaagggtttatatgaattcttcaaatttaatctatgttgttataatatttttaagattaaaaatat 41923282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 547 - 618
Target Start/End: Complemental strand, 3676542 - 3676471
Alignment:
Q  547 attttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||| |||||||||||||||||||| | |||||||||||  ||||| ||| |||||||||||||||||    
T  3676542 attttgaagggtttatatgaattcttcaaatttaatctatgttgctataatattcttaaaattgaaaatata 3676471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 552 - 618
Target Start/End: Complemental strand, 2679908 - 2679842
Alignment:
Q  552 gaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    ||||||||||||||||||||| || | ||||||||||| |||||| |||||||||||| ||||||||    
T  2679908 gaaaggtttatatgaattctttaaatttaatctatgttgttataatatttttaaaattaaaaatata 2679842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 553 - 617
Target Start/End: Complemental strand, 9621962 - 9621898
Alignment:
Q  553 aaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatat 617  Q
    ||||||||||||||||||||||| | |||||||| || |||||| |||||||||||| |||||||    
T  9621962 aaaggtttatatgaattcttcaaatttaatctatattgttataatatttttaaaattaaaaatat 9621898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 557 - 621
Target Start/End: Original strand, 29799701 - 29799765
Alignment:
Q  557 gtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||| |||||||||| | |||| ||||||||||||| |||||||||||| |||||||||||    
T  29799701 gtttatataaattcttcaaatttaatatatgttattataatatttttaaaattaaaaatatatta 29799765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 555 - 621
Target Start/End: Original strand, 15399877 - 15399943
Alignment:
Q  555 aggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||| || | |||||| |||| |||||| |||||||||||| |||||||||||    
T  15399877 aggtttatatgaattctttaaatttaatctttgttgttataatatttttaaaattaaaaatatatta 15399943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 547 - 621
Target Start/End: Complemental strand, 17668161 - 17668087
Alignment:
Q  547 attttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||| | |||||| ||||||||||||| | ||||||||||  |||||| ||| ||||||||||||||||||||    
T  17668161 attttggagggtttacatgaattcttcaaatttaatctatgtagttataatattcttaaaattgaaaatatatta 17668087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 556 - 618
Target Start/End: Complemental strand, 18675741 - 18675679
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||||||| | | |||||||||||||||||  |||||||||||| ||||||||    
T  18675741 ggtttatatgaattcttcgaatttaatctatgttattatattatttttaaaattaaaaatata 18675679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 547 - 621
Target Start/End: Complemental strand, 19389855 - 19389781
Alignment:
Q  547 attttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||| | |||||| ||||||||||||| | ||||||||||  |||||| |||||||||||| |||||||||||    
T  19389855 attttggagggtttacatgaattcttcaaatttaatctatgtagttataatatttttaaaattaaaaatatatta 19389781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 13294002 - 13293937
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||| ||||||||||| |||||| |||| |||||| |||||||||||  |||||||||||    
T  13294002 ggtttatatgtattcttcaagtttaatctctgttgttataatatttttaaaataaaaaatatatta 13293937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 554 - 621
Target Start/End: Complemental strand, 35708782 - 35708715
Alignment:
Q  554 aaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||||| | |||| |||||| |||||  |||||||||||  |||||||||||    
T  35708782 aaggtttatatgaattcttcaaatttaatatatgttgttatattatttttaaaatgaaaaatatatta 35708715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 551 - 621
Target Start/End: Complemental strand, 38302381 - 38302311
Alignment:
Q  551 tgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||| |||||||||||||| ||||| |  ||||||||||||||||| ||| |||||||| ||| |||||||    
T  38302381 tgaagggtttatatgaatttttcaaattcaatctatgttattataatattcttaaaattaaaagtatatta 38302311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 618
Target Start/End: Complemental strand, 43496899 - 43496837
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||||||||| | |||| |||||| |||||| |||||||||||  ||||||||    
T  43496899 ggtttatatgaattcttcaaatttaatttatgttgttataatatttttaaaataaaaaatata 43496837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 1658240 - 1658305
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  ||||||||||||||||| ||| |||||||| ||| |||||||    
T  1658240 ggtttatatgaatttttcaaattcaatctatgttattataatattcttaaaattaaaagtatatta 1658305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 1935125 - 1935060
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||| |||||||||||| | |||| |||||| |||||| ||| |||||||| |||||||||||    
T  1935125 ggtttatgtgaattcttcaaatttaatatatgttgttataatattcttaaaattaaaaatatatta 1935060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 3081350 - 3081285
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||||||||| || | |||| |||||| |||||| ||| |||||||| |||||||||||    
T  3081350 ggtttatatgaattctttaaatttaatatatgttcttataatattcttaaaattaaaaatatatta 3081285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 4841727 - 4841662
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| |  ||| |||||| |||||| ||| |||||||| |||||||||||    
T  4841727 ggtttatatgaattcttcaaattgaatatatgttgttataatattcttaaaattaaaaatatatta 4841662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 6491247 - 6491312
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| | |||  |||||| |||||| ||| |||||||| |||||||||||    
T  6491247 ggtttatatgaattcttcaaatttaacttatgttgttataatattcttaaaattaaaaatatatta 6491312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 37508408 - 37508343
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| |||||||||||| ||| |||||||    
T  37508408 ggtttatatgaatttttcaaattcaatctatgttgttataatatttttaaaattaaaagtatatta 37508343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 561 - 621
Target Start/End: Complemental strand, 12063999 - 12063939
Alignment:
Q  561 atatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||| ||||| | |||| |||||| |||||| |||||||||||| |||||||||||    
T  12063999 atatgaattattcaaatttaatatatgttgttataatatttttaaaattaaaaatatatta 12063939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 547 - 621
Target Start/End: Original strand, 344090 - 344162
Alignment:
Q  547 attttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||| |||||||||||||||| || | |||  |||||| |||||||||| |||||||| |||||| ||||    
T  344090 attttgaaatgtttatatgaattctttaaatttaa--tatgtttttataacattcttaaaattaaaaatacatta 344162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 556 - 618
Target Start/End: Original strand, 6632712 - 6632773
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||| ||||| | |||| ||||||||||||| ||| |||||||| ||||||||    
T  6632712 ggtttatatgaattattcaaat-taatatatgttattataatattcttaaaattaaaaatata 6632773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 548 - 618
Target Start/End: Original strand, 8944100 - 8944170
Alignment:
Q  548 ttttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    ||||| ||||| |||||||||||||||| | |||| |||||| |||||  ||||| |||||| ||||||||    
T  8944100 ttttggaaggtgtatatgaattcttcaaatttaatatatgttgttatattattttaaaaattaaaaatata 8944170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 563 - 621
Target Start/End: Original strand, 12096973 - 12097031
Alignment:
Q  563 atgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||||| |  ||||||| ||||||||| ||| |||||||| |||||||||||    
T  12096973 atgaattcttcaaattcaatctatattattataatattcttaaaatttaaaatatatta 12097031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 556 - 618
Target Start/End: Complemental strand, 14570068 - 14570006
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||||||||| | ||||||| ||| |||||  |||||||||||| || |||||    
T  14570068 ggtttatatgaattcttcaaatttaatctaagttgttatattatttttaaaattaaatatata 14570006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 556 - 618
Target Start/End: Original strand, 15974403 - 15974465
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||| |||||||| || | ||||||||||| |||||  |||||||||||| ||||||||    
T  15974403 ggtttatacgaattctttaaatttaatctatgttgttatattatttttaaaattaaaaatata 15974465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 556 - 618
Target Start/End: Complemental strand, 38568395 - 38568334
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||||||||| | ||||||||||| |||||   ||||||||||| ||||||||    
T  38568395 ggtttatatgaattcttcaaatttaatctatgttgttatattgtttttaaaatt-aaaatata 38568334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 9684809 - 9684744
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||| ||||||||||||| | ||||||| ||  |||||| ||| |||||||| |||||||||||    
T  9684809 ggtttacatgaattcttcaaatctaatctaagtagttataatattcttaaaattaaaaatatatta 9684744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 10295546 - 10295611
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  10295546 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 10295611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 15916946 - 15917011
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||| |||||||| || | |||| |||||| |||||| ||| |||||||| |||||||||||    
T  15916946 ggtttatacgaattctttaaatttaatatatgttgttataatattcttaaaatttaaaatatatta 15917011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 17092960 - 17093025
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  17092960 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 17093025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 613
Target Start/End: Original strand, 18671075 - 18671132
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaa 613  Q
    ||||||| |||||||||||| | ||||| ||||| |||||  ||||||||||||||||    
T  18671075 ggtttatgtgaattcttcaaatttaatcaatgttgttatattatttttaaaattgaaa 18671132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 27480190 - 27480125
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  27480190 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 27480125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 33682435 - 33682500
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| | ||||||| || | ||||| ||| | |||||| |||||||||||    
T  33682435 ggtttatatgaattcttcaaatttaatctacgtaaatataatattctaaaaatttaaaatatatta 33682500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 547 - 616
Target Start/End: Complemental strand, 35683500 - 35683431
Alignment:
Q  547 attttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaata 616  Q
    |||||| | |||| ||| ||||||||||| | |||| |||||| |||||| |||||||||||| ||||||    
T  35683500 attttggagggttaataagaattcttcaaatttaatttatgttgttataatatttttaaaattaaaaata 35683431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 37894444 - 37894513
Alignment:
Q  348 ttcacaattttcatgtttaaagtgcattggatagtggaaatgagcttctataagctaatctaaatacaca 417  Q
    |||| |||||||| ||||||||||||||||  ||||||||||||| || | || |||||| ||| |||||    
T  37894444 ttcataattttcacgtttaaagtgcattgggaagtggaaatgagcctccaaaaactaatccaaacacaca 37894513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 3e-17; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 877 - 967
Target Start/End: Original strand, 40016455 - 40016545
Alignment:
Q  877 tttggatatgcggttacattgttattctcgcgtctaaatgttatttagccgtagattttgagaagctacatattgtagctttaggttgaac 967  Q
    ||||| |||||||||| |||| |||||| |||||  ||  | |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  40016455 tttgggtatgcggttaaattgctattcttgcgtcccaagatcatttggccgtggattttgagaagctacatattgtagctttaggttgaac 40016545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 547 - 619
Target Start/End: Complemental strand, 28539453 - 28539381
Alignment:
Q  547 attttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatat 619  Q
    |||||| | |||||||||||||||||||| | ||||||||||| |||||  |||||||||||| |||||||||    
T  28539453 attttggagggtttatatgaattcttcaaatttaatctatgttgttatattatttttaaaattaaaaatatat 28539381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 11522198 - 11522133
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| | |||| |||||| |||||| ||| |||||||| |||||||||||    
T  11522198 ggtttatatgaattcttcaaatttaatatatgttgttataatattcttaaaattaaaaatatatta 11522133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 13767481 - 13767546
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| |||||||||||| |||||||||||    
T  13767481 ggtttatatgaatttttcaaattcaatctatgttgttataatatttttaaaattaaaaatatatta 13767546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 919 - 986
Target Start/End: Original strand, 7442480 - 7442547
Alignment:
Q  919 atttagccgtagattttgagaagctacatattgtagctttaggttgaacgtgcggtgacgtcaactcc 986  Q
    |||| ||||| ||||||||||||| ||||||||||||||| |||| |||||| |||| |||| |||||    
T  7442480 atttggccgtggattttgagaagccacatattgtagcttttggttaaacgtgtggtggcgtcgactcc 7442547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 556 - 619
Target Start/End: Complemental strand, 16625822 - 16625759
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatat 619  Q
    |||||||||||||||||||| | ||||||||||| |||||| ||| |||| ||| |||||||||    
T  16625822 ggtttatatgaattcttcaaatttaatctatgttgttataatattcttaatattaaaaatatat 16625759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 12941824 - 12941750
Alignment:
Q  549 tttgaaag-gtttatatgaattcttcaagtataatctatgtta-ttataacatttttaaaattgaaaatatatta 621  Q
    |||||||| ||||||||||||||||||| | |||| ||||||  |||||| |||||||||||| |||||||||||    
T  12941824 tttgaaagagtttatatgaattcttcaaatttaatatatgtttgttataatatttttaaaattaaaaatatatta 12941750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 618
Target Start/End: Original strand, 39205080 - 39205142
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    ||||||||||||||||| || | ||||||||||| |||||  |||||||||||| ||||||||    
T  39205080 ggtttatatgaattcttgaaatttaatctatgttgttatattatttttaaaattaaaaatata 39205142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 609
Target Start/End: Original strand, 31082868 - 31082921
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaatt 609  Q
    |||||||||||||||||||| | |||| |||||| |||||| ||||||||||||    
T  31082868 ggtttatatgaattcttcaaatttaatttatgttgttataatatttttaaaatt 31082921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 36870306 - 36870371
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| | |||| || ||| |||||| ||| |||||||| |||||||||||    
T  36870306 ggtttatatgaattcttcaattttaatatacgttgttataatattcttaaaattaaaaatatatta 36870371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 557 - 621
Target Start/End: Complemental strand, 9087482 - 9087418
Alignment:
Q  557 gtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||||||||||| | |||| |||||| | |||| ||| |||||||| |||||||||||    
T  9087482 gtttatatgaattcttcaaatttaatatatgttgtcataatattattaaaattaaaaatatatta 9087418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 556 - 616
Target Start/End: Original strand, 21626188 - 21626248
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaata 616  Q
    |||| ||| ||||||||||| | ||||||||||| |||||| |||||||||||| ||||||    
T  21626188 ggttaataagaattcttcaaatttaatctatgttgttataatatttttaaaattaaaaata 21626248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 554 - 621
Target Start/End: Complemental strand, 8410950 - 8410883
Alignment:
Q  554 aaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  8410950 aaggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 8410883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 547 - 618
Target Start/End: Complemental strand, 35550185 - 35550114
Alignment:
Q  547 attttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||| | |||||||||||||||||||| | ||||||| ||| |||||  |||||||||||  ||||||||    
T  35550185 attttggagggtttatatgaattcttcaaatttaatctacgttgttatattatttttaaaataaaaaatata 35550114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 554 - 621
Target Start/End: Original strand, 40357518 - 40357585
Alignment:
Q  554 aaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  40357518 aaggtttatatgaatttttcaaatccaatctatgttgttataatattcttaaaattaaaattatatta 40357585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 557 - 616
Target Start/End: Complemental strand, 43190566 - 43190507
Alignment:
Q  557 gtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaata 616  Q
    |||| |||||||||||||| | ||||||||||| |||||| ||| |||||||| ||||||    
T  43190566 gtttgtatgaattcttcaaatttaatctatgttgttataatattcttaaaattaaaaata 43190507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 558 - 621
Target Start/End: Complemental strand, 44954036 - 44953973
Alignment:
Q  558 tttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||| ||||| || | |||| ||||||||||||| ||| |||||||| |||||||||||    
T  44954036 tttatatgagttctttaaatttaatatatgttattataatattcttaaaattaaaaatatatta 44953973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 547 - 621
Target Start/End: Original strand, 4666189 - 4666263
Alignment:
Q  547 attttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||| |||||| ||||||||| ||||| | |||| ||| || |||||| ||| |||||||| |||||||||||    
T  4666189 attttggaaggttaatatgaatttttcaaatttaatatatcttgttataatattcttaaaatttaaaatatatta 4666263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 556 - 618
Target Start/End: Original strand, 14385143 - 14385205
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||| ||||| ||||||| | ||||||||||  |||||| |||||||||||| ||||||||    
T  14385143 ggtttacatgaaatcttcaaatttaatctatgtagttataatatttttaaaattaaaaatata 14385205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 559 - 621
Target Start/End: Original strand, 31809471 - 31809533
Alignment:
Q  559 ttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||| ||||||||||   ||||||||||| |||||| |||||||||||  |||||||||||    
T  31809471 ttatattaattcttcaaaattaatctatgttgttataatatttttaaaataaaaaatatatta 31809533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 3119870 - 3119805
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  3119870 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 3119805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 4042027 - 4042092
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  4042027 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 4042092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 621
Target Start/End: Complemental strand, 8184187 - 8184114
Alignment:
Q  548 ttttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||| ||| |||| ||||||||||||  | ||||||||||  |||||| |||||| ||||| |||||||||||    
T  8184187 ttttggaagatttacatgaattcttcagatttaatctatgtacttataatattttttaaattaaaaatatatta 8184114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 12963989 - 12963924
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  12963989 ggtttatatgaatttttcaaatccaatctatgtttttataatattcttaaaattaaaagtatatta 12963924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 13765957 - 13765892
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  13765957 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 13765892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 580 - 621
Target Start/End: Original strand, 26427619 - 26427660
Alignment:
Q  580 aatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||||| ||| |||||||||||| |||||||||||    
T  26427619 aatctatgttattttaatatttttaaaattaaaaatatatta 26427660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 36567296 - 36567231
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  36567296 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 36567231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 557 - 618
Target Start/End: Original strand, 37217019 - 37217080
Alignment:
Q  557 gtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    ||||||||||||||||||| | ||||||||| |  ||||| ||| |||||||| ||||||||    
T  37217019 gtttatatgaattcttcaaatttaatctatgctgctataatattcttaaaattaaaaatata 37217080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 44137198 - 44137263
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  44137198 ggtttatatgaatttttcaaattcaatctatgttcttataatattcttaaaattaaaagtatatta 44137263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 44656768 - 44656703
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||| |||||| ||||| | |||| |||||| |||||| ||| |||||||| |||||||||||    
T  44656768 ggtttatgtgaattgttcaaatttaatatatgttgttataatattcttaaaattaaaaatatatta 44656703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 556 - 618
Target Start/End: Complemental strand, 12277 - 12215
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||||||||| | ||||||||||| |||||| |||||||||||| ||||||||    
T  12277 ggtttatatgaattcttcaaatttaatctatgttgttataatatttttaaaattaaaaatata 12215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 556 - 618
Target Start/End: Complemental strand, 38505362 - 38505300
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||||||||| | ||||||||||| |||||| |||||||||||| ||||||||    
T  38505362 ggtttatatgaattcttcaaatttaatctatgttgttataatatttttaaaattaaaaatata 38505300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 548 - 622
Target Start/End: Original strand, 41471493 - 41471567
Alignment:
Q  548 ttttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatattac 622  Q
    ||||| |||||||||| ||||||||||| | ||||||||||| || ||| |||||||||||| ||||||||||||    
T  41471493 ttttggaaggtttatacgaattcttcaaatttaatctatgttgttttaatatttttaaaattaaaaatatattac 41471567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 547 - 621
Target Start/End: Original strand, 14676284 - 14676358
Alignment:
Q  547 attttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||| | |||||| ||||||||||||| | ||||||||||  |||||| ||| ||||||||||||||||||||    
T  14676284 attttggagggtttacatgaattcttcaaatttaatctatgtagttataatattcttaaaattgaaaatatatta 14676358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 556 - 618
Target Start/End: Complemental strand, 43348257 - 43348195
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||| ||||||||||||||| | ||||||||||| |||||| |||||||||||| ||||||||    
T  43348257 ggttaatatgaattcttcaaatttaatctatgttgttataatatttttaaaattaaaaatata 43348195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 1278001 - 1278066
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| | |||| |||||| |||||| ||| |||||||| |||||||||||    
T  1278001 ggtttatatgaattcttcaaatttaatatatgttgttataatattcttaaaattaaaaatatatta 1278066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 33187865 - 33187800
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| |||||| ||| || |||||| ||| |||||||| |||||||||||    
T  33187865 ggtttatatgaattcttcaaatataatatatattgttataatattcttaaaattaaaaatatatta 33187800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 554 - 621
Target Start/End: Original strand, 38137992 - 38138059
Alignment:
Q  554 aaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||| |||||||||||||||| | ||||||||||| |||||| |||||| ||||| ||||| |||||    
T  38137992 aaggtctatatgaattcttcaaatttaatctatgttgttataatatttttgaaattaaaaatgtatta 38138059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 554 - 621
Target Start/End: Original strand, 46449233 - 46449300
Alignment:
Q  554 aaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||| ||||| |  ||||||||||||||||| ||| |||||||| ||| |||||||    
T  46449233 aaggtttatatgaatttttcaaattcaatctatgttattataatattcttaaaattaaaagtatatta 46449300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 554 - 621
Target Start/End: Complemental strand, 47276022 - 47275955
Alignment:
Q  554 aaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||| ||||| |  ||||||||||||||||| ||| |||||||| ||| |||||||    
T  47276022 aaggtttatatgaatttttcaaatccaatctatgttattataatattcttaaaattaaaagtatatta 47275955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 618
Target Start/End: Original strand, 13044210 - 13044272
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||||||||| | |||| |||||| |||||  |||||||||||| ||||||||    
T  13044210 ggtttatatgaattcttcaaatttaatatatgttgttatattatttttaaaattaaaaatata 13044272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 618
Target Start/End: Original strand, 17818349 - 17818411
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||| ||||||||||||| | ||||||||||| |||||  |||||||||||| ||||||||    
T  17818349 ggtttagatgaattcttcaaatttaatctatgttgttatagtatttttaaaattaaaaatata 17818411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 618
Target Start/End: Complemental strand, 33872138 - 33872076
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||||||||| | ||||||||||| |||||  |||||| ||||| ||||||||    
T  33872138 ggtttatatgaattcttcaaatttaatctatgttgttatattattttttaaattaaaaatata 33872076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 618
Target Start/End: Complemental strand, 35264910 - 35264848
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||| ||||| | |||| |||||| |||||| |||||||||||| ||||||||    
T  35264910 ggtttatatgaatttttcaaatttaatttatgttgttataatatttttaaaattaaaaatata 35264848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 547 - 621
Target Start/End: Complemental strand, 38991500 - 38991426
Alignment:
Q  547 attttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||| | |||||||||||| ||||| | |||| ||||||||||||| ||| |||||||  |||||||||||    
T  38991500 attttgaatgatttatatgaattattcaaatttaatatatgttattataatattcttaaaataaaaaatatatta 38991426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 618
Target Start/End: Complemental strand, 42267025 - 42266963
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    ||||||||||||| |||||| | ||||||||||| |||||| ||| |||||||| ||||||||    
T  42267025 ggtttatatgaatgcttcaaatttaatctatgttgttataatattcttaaaattaaaaatata 42266963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 618
Target Start/End: Original strand, 43741758 - 43741820
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    ||||| |||||||||||||| | |||| ||||| ||||||| |||||||||||| ||||||||    
T  43741758 ggtttgtatgaattcttcaaatttaatttatgtaattataatatttttaaaattaaaaatata 43741820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 21687496 - 21687561
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||| |||||||||| | |||| || ||| |||||| |||||||||||| |||||||||||    
T  21687496 ggtttatataaattcttcaaatttaatataagttgttataatatttttaaaattaaaaatatatta 21687561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 25335370 - 25335435
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| | |||||||| || |||||| ||| |||||||| |||||||||||    
T  25335370 ggtttatatgaatttttcaaatttaatctattttgttataaaattcttaaaattaaaaatatatta 25335435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 558 - 619
Target Start/End: Complemental strand, 38233752 - 38233691
Alignment:
Q  558 tttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatat 619  Q
    |||||||||||||||||| | || || |||||||||||| |||||||| ||| |||||||||    
T  38233752 tttatatgaattcttcaattttattccatgttattataatatttttaatattaaaaatatat 38233691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 41002269 - 41002204
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| |||||||||||    
T  41002269 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaaatatatta 41002204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 43665187 - 43665122
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| |||||||||||    
T  43665187 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaaatatatta 43665122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 556 - 608
Target Start/End: Original strand, 30081035 - 30081087
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaat 608  Q
    |||||||||||||||||||  | ||||||||||| |||||| |||||||||||    
T  30081035 ggtttatatgaattcttcagatttaatctatgttgttataatatttttaaaat 30081087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 557 - 621
Target Start/End: Original strand, 31891340 - 31891403
Alignment:
Q  557 gtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||||||||||| | ||||||||||| |||||| ||| || ||||| |||||||||||    
T  31891340 gtttatatgaattcttcaaatttaatctatgttgttataatattctt-aaattaaaaatatatta 31891403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 547 - 618
Target Start/End: Complemental strand, 2826274 - 2826203
Alignment:
Q  547 attttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||| ||| |||||||||||||||||| | ||||| ||||| |||||  |||||||||||  ||||||||    
T  2826274 attttggaagctttatatgaattcttcaaatttaatcaatgttgttatattatttttaaaatgaaaaatata 2826203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 563 - 621
Target Start/End: Complemental strand, 4788014 - 4787956
Alignment:
Q  563 atgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||| ||||| | |||| |||||| |||||| |||||||||||| |||||||||||    
T  4788014 atgaatttttcaattttaatatatgttgttataatatttttaaaattaaaaatatatta 4787956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 557 - 618
Target Start/End: Original strand, 4126025 - 4126086
Alignment:
Q  557 gtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    ||||||||||||| ||||| | ||||||| ||| |||||  |||||||||||| ||||||||    
T  4126025 gtttatatgaattattcaaatttaatctacgttgttatattatttttaaaattaaaaatata 4126086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 5968071 - 5968006
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  5968071 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 5968006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 557 - 618
Target Start/End: Complemental strand, 10591921 - 10591860
Alignment:
Q  557 gtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    ||||||||||||||||||| | ||||||||||| |||  | | |||||||||| ||||||||    
T  10591921 gtttatatgaattcttcaaatttaatctatgttgttactataattttaaaattaaaaatata 10591860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 23620811 - 23620747
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| |||||||||||    
T  23620811 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaatt-aaaatatatta 23620747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 38235857 - 38235922
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  ||||||| || |||||| |||||||||||| ||| |||||||    
T  38235857 ggtttatatgaatttttcaaattcaatctatattgttataatatttttaaaattaaaagtatatta 38235922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 43188920 - 43188985
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  43188920 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 43188985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 45510405 - 45510470
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||| | ||||||||||| | ||||||| ||  |||||| |||||||||||| |||||||||||    
T  45510405 ggtttagacgaattcttcaaatttaatctaagtagttataatatttttaaaatttaaaatatatta 45510470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 556 - 618
Target Start/End: Complemental strand, 33590347 - 33590285
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||| ||||||||||||||| | |||||||||||||||||| |||||||||||| ||||||||    
T  33590347 ggttaatatgaattcttcaaatttaatctatgttattataatatttttaaaattaaaaatata 33590285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 548 - 619
Target Start/End: Complemental strand, 20381892 - 20381821
Alignment:
Q  548 ttttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatat 619  Q
    ||||||| |||||||||||||||||||| | |||| |||||| |||||| ||| |||||||| |||||||||    
T  20381892 ttttgaagggtttatatgaattcttcaattttaatatatgttgttataatattcttaaaattaaaaatatat 20381821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 548 - 618
Target Start/End: Original strand, 19477311 - 19477381
Alignment:
Q  548 ttttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    ||||| ||| |||||||||||||||||| | ||||||||||| |||||| |||||||||||| || |||||    
T  19477311 ttttggaagatttatatgaattcttcaaatttaatctatgttgttataatatttttaaaattaaatatata 19477381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 548 - 621
Target Start/End: Complemental strand, 13120448 - 13120375
Alignment:
Q  548 ttttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||| |||||| ||||||||||||| |  |||||||||| |||||| ||| |||||||| |||||||||||    
T  13120448 ttttgaacggtttacatgaattcttcaaattcaatctatgttgttataatattgttaaaattaaaaatatatta 13120375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 549 - 618
Target Start/End: Original strand, 26289607 - 26289676
Alignment:
Q  549 tttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||| | |||||||||||||||||| | ||||||||||| |||||  |||||||||||| ||||||||    
T  26289607 tttgaaggatttatatgaattcttcaaatttaatctatgttgttatattatttttaaaattaaaaatata 26289676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 15504826 - 15504754
Alignment:
Q  549 tttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||||| ||||||||||||| | ||||||| |   |||||||||| |||||||| |||||||||||    
T  15504826 tttgaaaggtttacatgaattcttcaaatttaatctaaggagttataacattcttaaaattaaaaatatatta 15504754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 556 - 620
Target Start/End: Complemental strand, 25072549 - 25072485
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatt 620  Q
    |||||||| ||||||||||| | |||||||||||||||||| ||| |||||||| ||| ||||||    
T  25072549 ggtttatacgaattcttcaaatttaatctatgttattataatattcttaaaattaaaagtatatt 25072485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 555 - 618
Target Start/End: Complemental strand, 28551914 - 28551851
Alignment:
Q  555 aggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    ||||||||||||||||||||| | |||| |||||| |||||| |||||||||||| | ||||||    
T  28551914 aggtttatatgaattcttcaaatttaatttatgttgttataatatttttaaaattaacaatata 28551851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 2502384 - 2502319
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| | |||| ||| || |||||| ||| |||||||| |||||||||||    
T  2502384 ggtttatatgaattcttcaaatttaatatatattgttataatattcttaaaattaaaaatatatta 2502319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 8439413 - 8439348
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||| | |||||||| | ||||||||||| |||||| ||| |||||||| |||||||||||    
T  8439413 ggtttatattatttcttcaaatttaatctatgtttttataatattgttaaaattaaaaatatatta 8439348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 547 - 616
Target Start/End: Original strand, 12779567 - 12779636
Alignment:
Q  547 attttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaata 616  Q
    |||||| | |||| ||| ||||||||||| | ||||||||||| |||||| |||||||||||| ||||||    
T  12779567 attttggagggttaataagaattcttcaaatttaatctatgttgttataatatttttaaaattaaaaata 12779636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 544 - 621
Target Start/End: Complemental strand, 34557202 - 34557125
Alignment:
Q  544 agaattttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||  ||||| ||||||||||||| | ||||| ||||  |||||| ||||||||| || |||||||||||    
T  34557202 agaattttgaagcgtttacatgaattcttcaaatttaatcaatgtatttataatatttttaaagttaaaaatatatta 34557125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 557 - 621
Target Start/End: Complemental strand, 4089414 - 4089350
Alignment:
Q  557 gtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||| || |||||||| | |||| |||||| | |||| ||||||||||||||||||||||||    
T  4089414 gtttatacgatttcttcaaatttaatatatgttgtcataatatttttaaaattgaaaatatatta 4089350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 347 - 407
Target Start/End: Original strand, 9729814 - 9729874
Alignment:
Q  347 cttcacaattttcatgtttaaagtgcattggatagtggaaatgagcttctataagctaatc 407  Q
    |||||||||||||| ||||||||||||||||  |||||| |||||| || | |||||||||    
T  9729814 cttcacaattttcacgtttaaagtgcattgggaagtggagatgagcctccaaaagctaatc 9729874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 557 - 621
Target Start/End: Complemental strand, 31345388 - 31345324
Alignment:
Q  557 gtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||||| ||||| | ||||||||||| |||||| ||| |||||||| ||| |||||||    
T  31345388 gtttatatgaatttttcaaatttaatctatgttgttataatattcttaaaattaaaagtatatta 31345324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 554 - 621
Target Start/End: Complemental strand, 27793627 - 27793560
Alignment:
Q  554 aaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||| |||||||| ||||| ||||| ||||||| ||| || ||| |||||||| |||||||||||    
T  27793627 aaggtttgtatgaatttttcaaatataacctatgttgttaaaatattcttaaaattaaaaatatatta 27793560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 547 - 618
Target Start/End: Original strand, 32222056 - 32222127
Alignment:
Q  547 attttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||| | |||||||||||||||||||| | ||| |||||||  ||||||||| |||||||  ||||||||    
T  32222056 attttggagggtttatatgaattcttcaaatttaaactatgttgctataacattcttaaaataaaaaatata 32222127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 556 - 619
Target Start/End: Original strand, 33212383 - 33212446
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatat 619  Q
    |||||||||||||||||||| | ||||  ||||| |||||| ||| |||||||| |||||||||    
T  33212383 ggtttatatgaattcttcaaatttaatacatgttgttataatattcttaaaattaaaaatatat 33212446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 556 - 618
Target Start/End: Original strand, 33755102 - 33755164
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||| |||||   ||||||||||| |||||  |||||||||||| ||||||||    
T  33755102 ggtttatatgaattattcaaaattaatctatgttgttatattatttttaaaatttaaaatata 33755164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 1029356 - 1029421
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  1029356 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 1029421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 4909933 - 4909868
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||| |||| ||||| |  |||||||||| |||||| |||||||||||| ||| |||||||    
T  4909933 ggtttatatcaatttttcaaattcaatctatgttgttataatatttttaaaattaaaagtatatta 4909868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 547 - 621
Target Start/End: Original strand, 15615721 - 15615791
Alignment:
Q  547 attttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||| | |||||||||||||||||||| | |||||| |||||| |||    |||||||||| |||||||||||    
T  15615721 attttggagggtttatatgaattcttcaaatttaatctttgttataata----ttttaaaattaaaaatatatta 15615791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 24734943 - 24735008
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  24734943 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 24735008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 26574413 - 26574348
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  26574413 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 26574348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 26683380 - 26683445
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||| ||||||||||||| | |||| ||| | ||||||| ||| |||||||| |||||||||||    
T  26683380 ggtttacatgaattcttcaaatttaatttatataattataaaattcttaaaattaaaaatatatta 26683445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 556 - 617
Target Start/End: Complemental strand, 90903 - 90842
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatat 617  Q
    |||||||||||||||||||| | ||||||||||| |||||| |||||||||||| |||||||    
T  90903 ggtttatatgaattcttcaaatttaatctatgttgttataatatttttaaaattaaaaatat 90842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 552 - 621
Target Start/End: Original strand, 21443081 - 21443150
Alignment:
Q  552 gaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||||||| | |||| ||| ||||||||| ||||| |||||| |||||||||||    
T  21443081 gaaaggtttatatgaattcttcaaatttaatatatattattataatattttaaaaattaaaaatatatta 21443150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 52430593 - 52430528
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| | |||| |||||| |||||| |||||||||||| |||||||||||    
T  52430593 ggtttatatgaattcttcaaatttaatatatgttgttataatatttttaaaattaaaaatatatta 52430528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 557 - 621
Target Start/End: Complemental strand, 40423090 - 40423026
Alignment:
Q  557 gtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||||||||||| | ||||||||||| |||||| ||| |||||||| |||||||||||    
T  40423090 gtttatatgaattcttcaaatttaatctatgttgttataatattcttaaaattaaaaatatatta 40423026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 554 - 621
Target Start/End: Complemental strand, 32649024 - 32648957
Alignment:
Q  554 aaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||| ||||| | ||||||||||| |||||| ||| |||||||| |||||||||||    
T  32649024 aaggtttatatgaatttttcaaatttaatctatgttgttataatattcttaaaattaaaaatatatta 32648957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 6836463 - 6836528
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||||| |||||||| || |||||| ||| |||||||| |||||||||||    
T  6836463 ggtttatatgaatttttcaagtttaatctatcttgttataaaattcttaaaattaaaaatatatta 6836528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 37662706 - 37662771
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||| ||||||||||||| | |||| |||||| |||||| |||||||||||| |||||||||||    
T  37662706 ggtttagatgaattcttcaaatttaatatatgttcttataatatttttaaaattaaaaatatatta 37662771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 49936565 - 49936630
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| |  |||||||||| |||||| ||| |||||||| |||||||||||    
T  49936565 ggtttatatgaattcttcaaattcaatctatgttgttataatattcttaaaattaaaaatatatta 49936630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 558 - 621
Target Start/End: Original strand, 28880056 - 28880119
Alignment:
Q  558 tttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||| | |||| |||||| |||||| ||| |||||||| |||||||||||    
T  28880056 tttatatgaattcttcaaatttaatatatgttgttataatattcttaaaattaaaaatatatta 28880119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 554 - 621
Target Start/End: Original strand, 42954669 - 42954736
Alignment:
Q  554 aaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||| |||||||||||| | |||| ||||||||||||| ||| |||||||  |||||||||||    
T  42954669 aaggtttatgtgaattcttcaaatttaatgtatgttattataatattcttaaaatcaaaaatatatta 42954736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 618
Target Start/End: Original strand, 368120 - 368182
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||| ||||||||||||||| | |||| |||||| |||||| |||||||||||| ||||||||    
T  368120 ggttcatatgaattcttcaaatttaatttatgttgttataatatttttaaaattaaaaatata 368182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 559 - 621
Target Start/End: Original strand, 48620355 - 48620417
Alignment:
Q  559 ttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||||||||| | |||| |||||| |||||| ||| |||||||| |||||||||||    
T  48620355 ttatatgaattcttcaaatttaatatatgttgttataatattcttaaaattaaaaatatatta 48620417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 618
Target Start/End: Original strand, 55509940 - 55510002
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||||||||| | |||||||||||  ||||| |||||||||||  ||||||||    
T  55509940 ggtttatatgaattcttcaaatttaatctatgttgctataatatttttaaaataaaaaatata 55510002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 16535754 - 16535819
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| | ||||||||||| |||||| ||| |||||||| |||| ||||||    
T  16535754 ggtttatatgaatttttcaaatttaatctatgttgttataatattcttaaaattaaaaagatatta 16535819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 27143241 - 27143306
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| | |||| ||| || |||||| ||| |||||||| |||||||||||    
T  27143241 ggtttatatgaattcttcaaatttaatatatattgttataatattcttaaaattaaaaatatatta 27143306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 38366090 - 38366155
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  ||||||||||  ||||| |||||||||||| |||||||||||    
T  38366090 ggtttatatgaatttttcaaattcaatctatgttgctataatatttttaaaattaaaaatatatta 38366155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 46669963 - 46669898
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||||||||| || | |||| |||||| |||||| ||| |||||||| |||||||||||    
T  46669963 ggtttatatgaattctttaaatttaatatatgttgttataatattcttaaaattaaaaatatatta 46669898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 52594644 - 52594579
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| | ||||||||||| |||||| ||| |||||||| ||| |||||||    
T  52594644 ggtttatatgaatttttcaaatctaatctatgttgttataatattcttaaaattaaaagtatatta 52594579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 556 - 619
Target Start/End: Complemental strand, 8827838 - 8827775
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatat 619  Q
    ||||||||| |||||||||| | ||||||||||| |||||| ||| |||| ||| |||||||||    
T  8827838 ggtttatatcaattcttcaaatttaatctatgttgttataatattcttaatattaaaaatatat 8827775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 554 - 619
Target Start/End: Complemental strand, 3075784 - 3075721
Alignment:
Q  554 aaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatat 619  Q
    |||||||||||||||||||||| | |||  |||||| |||| | |||||||||||| |||||||||    
T  3075784 aaggtttatatgaattcttcaaatttaa--tatgttgttatcatatttttaaaattaaaaatatat 3075721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 557 - 618
Target Start/End: Complemental strand, 32866748 - 32866686
Alignment:
Q  557 gtttatatgaattcttcaagtataatctatgttattataaca-tttttaaaattgaaaatata 618  Q
    ||||||||||||| ||||| | ||||||||||||| |||| | ||||||||||| ||||||||    
T  32866748 gtttatatgaattattcaaatttaatctatgttatgataatattttttaaaattaaaaatata 32866686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 555 - 621
Target Start/End: Complemental strand, 37756742 - 37756676
Alignment:
Q  555 aggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  37756742 aggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 37756676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 556 - 618
Target Start/End: Complemental strand, 50494672 - 50494610
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||||||||| | |||| ||||||  ||||| | |||||||||| ||||||||    
T  50494672 ggtttatatgaattcttcaaatttaatttatgttgatataatacttttaaaattaaaaatata 50494610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 3127030 - 3126965
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  3127030 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 3126965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 7182209 - 7182144
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  7182209 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 7182144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 8828228 - 8828163
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||||||||| || | |||||| |||| |||||| ||||||||| |  |||||||||||    
T  8828228 ggtttatatgaattctttaaatttaatctttgttgttataatatttttaaattaaaaaatatatta 8828163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 13270016 - 13270081
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  13270016 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 13270081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 21730345 - 21730280
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||||||||| || |  |||||||||| |||||| ||| || ||||| |||||||||||    
T  21730345 ggtttatatgaattctttaaatccaatctatgttgttataatattcttgaaattaaaaatatatta 21730280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 32060709 - 32060774
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  32060709 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 32060774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 38317246 - 38317181
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  38317246 ggtttatatgaatttttcaaatccaatctatgttgttataatattcttaaaattaaaagtatatta 38317181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 617
Target Start/End: Original strand, 42650699 - 42650760
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatat 617  Q
    |||||||||||||||||||| | |||| |||||  |||||| ||| |||||||| |||||||    
T  42650699 ggtttatatgaattcttcaaatttaatttatgtcgttataatattcttaaaattaaaaatat 42650760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 557 - 618
Target Start/End: Original strand, 45823609 - 45823670
Alignment:
Q  557 gtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    ||||||||||||||||||| | |||| |||||| |||| | |||||||||||| || |||||    
T  45823609 gtttatatgaattcttcaaatttaatttatgttgttattaaatttttaaaattaaatatata 45823670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 47063745 - 47063810
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||| |||||||||||| | |||| |||||| |||| | ||| |||||||| |||||||||||    
T  47063745 ggtttatgtgaattcttcaaatttaatatatgttgttattatattcttaaaattaaaaatatatta 47063810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 47669873 - 47669938
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  47669873 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 47669938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 49404641 - 49404576
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  49404641 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 49404576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 548 - 621
Target Start/End: Complemental strand, 27102850 - 27102777
Alignment:
Q  548 ttttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||||||||||| | |||||| | || |||||| ||||||||| || |||||||||||    
T  27102850 ttttgaaaggtttatatgaattcttcaaatttaatctttattgttataatatttttaaatttaaaaatatatta 27102777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 43036341 - 43036276
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| | ||||||||||| |||||| ||| |||||||| |||||||||||    
T  43036341 ggtttatatgaattcttcaaatttaatctatgttgttataatattcttaaaattaaaaatatatta 43036276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 554 - 621
Target Start/End: Original strand, 50402802 - 50402869
Alignment:
Q  554 aaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||| ||||| |  |||||||||| |||||| |||||||||||| |||||||||||    
T  50402802 aaggtttatatgaatttttcaaatccaatctatgttgttataatatttttaaaattaaaaatatatta 50402869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 552 - 621
Target Start/End: Complemental strand, 12625846 - 12625776
Alignment:
Q  552 gaaaggtttatatgaattcttcaagtataatctatgttattataacattt-ttaaaattgaaaatatatta 621  Q
    |||||||||||||||||| ||| | | |||| |||||||||||||||||| |||||||| |||||||||||    
T  12625846 gaaaggtttatatgaattattcgaatttaatgtatgttattataacatttcttaaaatttaaaatatatta 12625776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 557 - 621
Target Start/End: Complemental strand, 25561335 - 25561271
Alignment:
Q  557 gtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||||||||||| | |||| ||||||||||||  ||| |||||||| |||||||||||    
T  25561335 gtttatatgaattcttcaaatttaatatatgttattatattattcttaaaattaaaaatatatta 25561271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 618
Target Start/End: Complemental strand, 20712234 - 20712172
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    ||||||||| |||||||||| |  |||||||||| |||||| |||||||||||| ||||||||    
T  20712234 ggtttatataaattcttcaaattcaatctatgttgttataatatttttaaaattaaaaatata 20712172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 618
Target Start/End: Original strand, 50226093 - 50226155
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||||||| | | ||||||||||| |||||  |||||||||||| ||||||||    
T  50226093 ggtttatatgaattcttctaatttaatctatgttgttatattatttttaaaattaaaaatata 50226155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 2925953 - 2925888
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| | ||||||||||| |||||| ||| |||||||| ||| |||||||    
T  2925953 ggtttatatgaatttttcaaatttaatctatgttgttataatattcttaaaattaaaagtatatta 2925888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 548 - 621
Target Start/End: Complemental strand, 35619540 - 35619467
Alignment:
Q  548 ttttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||| ||||| |||||||||||||| | |||| |||||| |||||| ||| |||||||| ||| |||||||    
T  35619540 ttttgaagggtttgtatgaattcttcaaatttaatatatgttgttataatattcttaaaattaaaagtatatta 35619467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 36385394 - 36385467
Alignment:
Q  549 tttgaaag-gtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||| |||||||||||||||| || | |||| |||||| |||||| |||||||||||| ||||| |||||    
T  36385394 tttgaaagagtttatatgaattctttaaatttaatttatgttgttataatatttttaaaattaaaaatgtatta 36385467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 557 - 618
Target Start/End: Complemental strand, 39886941 - 39886880
Alignment:
Q  557 gtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    ||||||||||||||||||| | ||||||||||| |||||  |||||||||| | ||||||||    
T  39886941 gtttatatgaattcttcaaatttaatctatgttgttatattatttttaaaactaaaaatata 39886880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 41432780 - 41432715
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||| ||||||||||||| | ||||||||||  |||||| ||| |||||||| |||||||||||    
T  41432780 ggtttacatgaattcttcaaatttaatctatgtagttataatattcttaaaattaaaaatatatta 41432715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 42162071 - 42162006
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| |||||||||||| ||| |||||||    
T  42162071 ggtttatatgaatttttcaaattcaatctatgttgttataatatttttaaaattaaaagtatatta 42162006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 42806239 - 42806296
Alignment:
Q  562 tatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatat 619  Q
    |||||||||||||| | ||||||||||| |||||| |||||||||||  |||||||||    
T  42806239 tatgaattcttcaaatttaatctatgttgttataatatttttaaaataaaaaatatat 42806296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 557 - 621
Target Start/End: Original strand, 6538022 - 6538086
Alignment:
Q  557 gtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||| ||||||| | |||| |||||| |||||| ||| |||||||| |||||||||||    
T  6538022 gtttatatgaactcttcaaatttaatatatgttgttataatattcttaaaattaaaaatatatta 6538086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 556 - 616
Target Start/End: Complemental strand, 17760503 - 17760443
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaata 616  Q
    |||| ||| ||||||||||| | ||||||||||| |||||| |||||||||||| ||||||    
T  17760503 ggttaataagaattcttcaaatttaatctatgttgttataatatttttaaaattaaaaata 17760443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 554 - 618
Target Start/End: Original strand, 32672654 - 32672718
Alignment:
Q  554 aaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||||||||||  | ||||||||||| || ||  |||||||||||| ||||||||    
T  32672654 aaggtttatatgaattcttcatatttaatctatgttgttgtattatttttaaaattaaaaatata 32672718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 556 - 620
Target Start/End: Complemental strand, 49102990 - 49102926
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatt 620  Q
    |||||||||||||||||||| | |||| ||||||  ||||| ||| |||||||| ||||||||||    
T  49102990 ggtttatatgaattcttcaaatttaatatatgttgctataatattcttaaaattaaaaatatatt 49102926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 558 - 621
Target Start/End: Complemental strand, 19652311 - 19652248
Alignment:
Q  558 tttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||  | |||||||| || |||||| ||| |||||||| |||||||||||    
T  19652311 tttatatgaattcttcatatttaatctattttgttataatattcttaaaattaaaaatatatta 19652248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 558 - 621
Target Start/End: Complemental strand, 24436948 - 24436885
Alignment:
Q  558 tttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||| || ||||| | ||||||||||| |||||| | |||||||||| |||||||||||    
T  24436948 tttatatgatttattcaaatttaatctatgttgttataatacttttaaaattaaaaatatatta 24436885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 557 - 621
Target Start/End: Original strand, 40243425 - 40243491
Alignment:
Q  557 gtttatatgaattcttcaag--tataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||| ||||||||||   ||||||||||||| |||||| ||| |||||||| |||||||||||    
T  40243425 gtttatataaattcttcaaaaatataatctatgttgttataatattcttaaaattaaaaatatatta 40243491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 556 - 618
Target Start/End: Complemental strand, 28848817 - 28848755
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||| ||||||||||||| | ||||||| ||  |||||| |||||||||||| ||||||||    
T  28848817 ggtttacatgaattcttcaaatttaatctaagtagttataatatttttaaaattaaaaatata 28848755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 556 - 618
Target Start/End: Original strand, 33324686 - 33324748
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||||||||| | ||||| ||||| |||||  |||||||||||| ||| ||||    
T  33324686 ggtttatatgaattcttcaaatttaatcaatgttgttatattatttttaaaattaaaattata 33324748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 557 - 619
Target Start/End: Complemental strand, 33854856 - 33854794
Alignment:
Q  557 gtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatat 619  Q
    ||||||||||||| ||||| | ||||||||||| |||| | |||||||| ||| |||||||||    
T  33854856 gtttatatgaatttttcaaatttaatctatgttgttatgatatttttaatattaaaaatatat 33854794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 557 - 619
Target Start/End: Original strand, 33926066 - 33926128
Alignment:
Q  557 gtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatat 619  Q
    ||||||||||||| ||||| | ||||||||||| |||| | |||||||| ||| |||||||||    
T  33926066 gtttatatgaatttttcaaatttaatctatgttgttatgatatttttaatattaaaaatatat 33926128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 556 - 618
Target Start/End: Original strand, 36886932 - 36886994
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||| ||||| | ||||||||||| |||||   ||||||||||| ||||||||    
T  36886932 ggtttatatgaatttttcaaatttaatctatgttgttatattgtttttaaaattaaaaatata 36886994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 896513 - 896448
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  896513 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 896448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 23871481 - 23871416
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  23871481 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 23871416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 32299165 - 32299230
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  32299165 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 32299230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 33579316 - 33579381
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||| ||||||||||||| | |||||||  | ||||||| ||| |||||||| |||||||||||    
T  33579316 ggtttacatgaattcttcaaatttaatctaaataattataatattcttaaaattaaaaatatatta 33579381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 36325778 - 36325843
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| |  |||||||||| ||| || ||| |||||||| ||| |||||||    
T  36325778 ggtttatatgaattcttcaaattcaatctatgttgttaaaatattattaaaattaaaattatatta 36325843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 47206442 - 47206377
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  47206442 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 47206377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 47905707 - 47905642
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  47905707 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 47905642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 51246592 - 51246527
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  ||||||| || |||||| |||||||||||| ||| |||||||    
T  51246592 ggtttatatgaatttttcaaattcaatctattttgttataaaatttttaaaattaaaagtatatta 51246527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 547 - 618
Target Start/End: Original strand, 43239723 - 43239794
Alignment:
Q  547 attttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||| |||||||||||||||||||| | |||||||||||  ||||| |||||||||||  ||||||||    
T  43239723 attttgaagggtttatatgaattcttcaaatttaatctatgttgatataatatttttaaaataaaaaatata 43239794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 556 - 618
Target Start/End: Complemental strand, 14581776 - 14581714
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||| ||||||||||| | |||||||||||||||||  |||||||||||| ||||||||    
T  14581776 ggtttataagaattcttcaattttaatctatgttattatattatttttaaaattaaaaatata 14581714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 548 - 618
Target Start/End: Complemental strand, 41866153 - 41866083
Alignment:
Q  548 ttttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    ||||||| ||||||||| |||||||||| | ||||||||||| |||||  |||||||||||| ||||||||    
T  41866153 ttttgaagggtttatataaattcttcaaatttaatctatgttgttatattatttttaaaattaaaaatata 41866083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 32216 - 32281
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| | |||| |||||| |||||| ||| |||||||| |||||||||||    
T  32216 ggtttatatgaattcttcaaatgtaatttatgttgttataatattcttaaaattaaaaatatatta 32281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 1839838 - 1839773
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| | |||| |||||| |||||| |||||||||||| || ||||||||    
T  1839838 ggtttatatgaattcttcaaatttaatatatgttgttataatatttttaaaattaaacatatatta 1839773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 7080012 - 7079947
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||| |||||||||||||| | || |||||||| |||||| |||||||||||| |||||||||||    
T  7080012 ggtttgtatgaattcttcaaatttagtctatgttgttataatatttttaaaattaaaaatatatta 7079947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 27085411 - 27085476
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| | |||| |||||| |||||| |||||| ||||| |||||||||||    
T  27085411 ggtttatatgaattcttcaaatttaatatatgttgttataatattttttaaattaaaaatatatta 27085476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 549 - 617
Target Start/End: Complemental strand, 4873267 - 4873199
Alignment:
Q  549 tttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatat 617  Q
    |||||| |||||||||||||| ||||| | |||||| |||| |||||| |||||||||||| |||||||    
T  4873267 tttgaagggtttatatgaatttttcaaatttaatctgtgttgttataatatttttaaaattaaaaatat 4873199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 557 - 621
Target Start/End: Original strand, 41455323 - 41455387
Alignment:
Q  557 gtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||||||||||| | |||| |||||| |||||| ||| |||||||| |||||||||||    
T  41455323 gtttatatgaattcttcaaatttaatatatgttgttataatattcttaaaattaaaaatatatta 41455387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 548 - 615
Target Start/End: Original strand, 13227765 - 13227832
Alignment:
Q  548 ttttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaat 615  Q
    ||||||| |||||||||||||| ||||| | |||| |||||| |||||| |||||||||||| |||||    
T  13227765 ttttgaagggtttatatgaattattcaaatttaatttatgttgttataatatttttaaaattaaaaat 13227832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 548 - 619
Target Start/End: Original strand, 39193986 - 39194057
Alignment:
Q  548 ttttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatat 619  Q
    ||||||| |||||||||||||||||||| | || |||||||| |||||| ||| |||| ||| |||||||||    
T  39193986 ttttgaagggtttatatgaattcttcaaatttattctatgttgttataatattcttaatattaaaaatatat 39194057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 551 - 621
Target Start/End: Complemental strand, 13865115 - 13865045
Alignment:
Q  551 tgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||| |||||||||||||| ||||| | ||||||||||| |||||| ||| |||||||| ||| |||||||    
T  13865115 tgaagggtttatatgaatttttcaaatttaatctatgttgttataatattcttaaaattaaaagtatatta 13865045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 618
Target Start/End: Original strand, 29584237 - 29584299
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    ||||||||||||||||||||   ||||||||||| |||||  |||||||||||| ||||||||    
T  29584237 ggtttatatgaattcttcaaaattaatctatgttgttatattatttttaaaattaaaaatata 29584299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 551 - 621
Target Start/End: Original strand, 29612049 - 29612119
Alignment:
Q  551 tgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||| |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| |||||||||||    
T  29612049 tgaagggtttatatgaatttttcaaattaaatctatgttgttataatattattaaaattaaaaatatatta 29612119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 10878800 - 10878735
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||| |||||||  | |||| |||||| |||||| |||||||||||| |||||||||||    
T  10878800 ggtttatatgagttcttcacatttaatatatgttgttataatatttttaaaattaaaaatatatta 10878735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 16424201 - 16424266
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| | |||| |||||  |||||| ||| |||||||| |||||||||||    
T  16424201 ggtttatatgaattcttcaaatttaatatatgtagttataatattcttaaaattaaaaatatatta 16424266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 31297366 - 31297301
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  ||||||||||||||||| ||| |||||||| ||| |||||||    
T  31297366 ggtttatatgaatttttcaaattcaatctatgttattataatattcttaaaattaaaagtatatta 31297301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 34336093 - 34336158
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| | |||||||| || |||||  |||||||||||| ||||| |||||    
T  34336093 ggtttatatgaattcttcaaatttaatctattttgttatattatttttaaaattaaaaatttatta 34336158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 548 - 620
Target Start/End: Complemental strand, 35856556 - 35856484
Alignment:
Q  548 ttttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatt 620  Q
    ||||| |||||||||||||||||||||| |  ||||||| || |||||| ||| ||| |||| ||||||||||    
T  35856556 ttttgcaaggtttatatgaattcttcaaatcaaatctatattgttataatattcttataattaaaaatatatt 35856484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 566 - 621
Target Start/End: Original strand, 22330763 - 22330818
Alignment:
Q  566 aattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||| | ||||||||||| | |||| |||||||||||| |||||||||||    
T  22330763 aattcttcaaatttaatctatgttgtgataatatttttaaaattaaaaatatatta 22330818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 556 - 619
Target Start/End: Original strand, 31149965 - 31150028
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatat 619  Q
    |||||||||||||||||||| | || |||||||| |||||| ||| |||| ||| |||||||||    
T  31149965 ggtttatatgaattcttcaaatttattctatgttgttataatattcttaatattaaaaatatat 31150028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 556 - 618
Target Start/End: Complemental strand, 12506214 - 12506152
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||||||||| | |||| ||| || |||||  |||||||||||| ||||||||    
T  12506214 ggtttatatgaattcttcaaatttaatatatattgttatattatttttaaaattaaaaatata 12506152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 1942071 - 1942006
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  1942071 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 1942006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 2474785 - 2474720
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  2474785 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 2474720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 3404592 - 3404527
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  3404592 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 3404527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 13258549 - 13258614
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| |  |||||||||| ||| || | | |||||||| |||||||||||    
T  13258549 ggtttatatgaattcttcaaatccaatctatgttcttagaatactcttaaaattaaaaatatatta 13258614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 26042255 - 26042320
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||| |||||| ||| | ||||| | ||| |||||| |||||||||||| |||||||||||    
T  26042255 ggtttatataaattctacaaatttaatcaaagttgttataatatttttaaaattaaaaatatatta 26042320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 32158828 - 32158893
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| || ||   |||| |||||| |||||| |||||||||||| |||||||||||    
T  32158828 ggtttatatgaattttttaaaattaatatatgttgttataatatttttaaaattaaaaatatatta 32158893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 34272578 - 34272643
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  34272578 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 34272643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 547 - 619
Target Start/End: Original strand, 39405113 - 39405186
Alignment:
Q  547 attttgaaaggtttatatgaattcttcaagtat-aatctatgttattataacatttttaaaattgaaaatatat 619  Q
    |||||||| | |||||||||||| ||||| | | ||||| | ||||||||| |||||||||||| |||||||||    
T  39405113 attttgaaggatttatatgaatttttcaaattttaatctttattattataatatttttaaaattaaaaatatat 39405186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.000000000002; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 560 - 618
Target Start/End: Original strand, 3537273 - 3537331
Alignment:
Q  560 tatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||||| | |||||||||||| ||||| |||||||||||| ||||||||    
T  3537273 tatatgaattcttcaaatttaatctatgttaatataatatttttaaaattaaaaatata 3537331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 39114982 - 39114917
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| |  ||||||||||||||||| ||| |||||||| ||| |||||||    
T  39114982 ggtttatatgaattcttcaaattcaatctatgttattataatattcttaaaattaaaattatatta 39114917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 556 - 619
Target Start/End: Original strand, 29623299 - 29623362
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatat 619  Q
    |||||||||||||||||||| | |||| |||||| |||||| |||||||| ||| |||||||||    
T  29623299 ggtttatatgaattcttcaaatttaatatatgttgttataatatttttaatattaaaaatatat 29623362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 547 - 621
Target Start/End: Complemental strand, 23420829 - 23420755
Alignment:
Q  547 attttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||||||||||||||||||||| | |||  | |||| |||||| ||| |||||||| ||| |||||||    
T  23420829 attttgaaaggtttatatgaattcttcaaatttaacttttgttgttataatattcttaaaattaaaagtatatta 23420755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 555 - 621
Target Start/End: Original strand, 27922023 - 27922089
Alignment:
Q  555 aggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||| ||||||||||||| | |||| |||||| |||||| ||||| |||||| |||||||||||    
T  27922023 aggtttacatgaattcttcaaatttaatttatgttgttataatattttaaaaattaaaaatatatta 27922089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 555 - 621
Target Start/End: Complemental strand, 39966897 - 39966831
Alignment:
Q  555 aggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||| || ||||| | |||| |||||| |||||| |||||||||||| |||||||||||    
T  39966897 aggtttatatgattttttcaaatttaatatatgttgttataatatttttaaaattaaaaatatatta 39966831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 555 - 621
Target Start/End: Original strand, 46017267 - 46017333
Alignment:
Q  555 aggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||||||| ||||| |  |||||||||| |||||| |||||||||||| ||| |||||||    
T  46017267 aggtttatatgaatttttcaaattcaatctatgttgttataatatttttaaaattaaaagtatatta 46017333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 47359372 - 47359438
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataaca-tttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| | ||||||||||| |||||  | ||||||||||| |||||||||||    
T  47359372 ggtttatatgaattcttcaaatttaatctatgttgttatattattttttaaaattaaaaatatatta 47359438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 556 - 618
Target Start/End: Original strand, 49183748 - 49183810
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||||||||| | ||||||||||| |||||  |||||||||||  ||||||||    
T  49183748 ggtttatatgaattcttcaaatttaatctatgttgttatattatttttaaaataaaaaatata 49183810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 549 - 618
Target Start/End: Complemental strand, 1339924 - 1339855
Alignment:
Q  549 tttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||| | |||| ||||||||||||| | |||||||| ||||||||| ||| |||||||| ||||||||    
T  1339924 tttgaaggatttacatgaattcttcaaatttaatctattttattataatattcttaaaatttaaaatata 1339855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 548 - 621
Target Start/End: Original strand, 13638482 - 13638554
Alignment:
Q  548 ttttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||||||||||| | |||||||| |  |||||| ||| |||||||| |||||||||||    
T  13638482 ttttgaaaggttta-atgaattcttcaaatttaatctatatagttataatattcttaaaattaaaaatatatta 13638554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 19148230 - 19148295
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||||| |||||| | |||| |||||| |||||| ||| |||||||| |||||||||||    
T  19148230 ggtttatatgaatgcttcaaatttaatttatgttgttataatattcttaaaattaaaaatatatta 19148295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 558 - 615
Target Start/End: Original strand, 30697429 - 30697486
Alignment:
Q  558 tttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaat 615  Q
    |||||||||||||||||| |||||| | |||||||| || |||||||||||| |||||    
T  30697429 tttatatgaattcttcaaatataatatttgttattacaatatttttaaaattaaaaat 30697486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 35283150 - 35283215
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||  | |||| |||||| |||||| ||| |||||||| |||||||||||    
T  35283150 ggtttatatgaattcttcatatttaatatatgttgttataatattcttaaaattaaaaatatatta 35283215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 48444568 - 48444633
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||||||||||| |||| | |||| ||| || |||||| |||||||||||| |||||||||||    
T  48444568 ggtttatatgaattcctcaaatttaatatatattgttataatatttttaaaattaaaaatatatta 48444633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 52620853 - 52620788
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||| ||||||||||||||| | |||| |||||| |||||| |||||||||||  |||||||||||    
T  52620853 ggttaatatgaattcttcaaatttaatatatgttgttataatatttttaaaataaaaaatatatta 52620788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 53888550 - 53888615
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| | |||| |||||| | |||| ||| |||||||| |||||||||||    
T  53888550 ggtttatatgaattcttcaaatttaatatatgttgtaataatattcttaaaattaaaaatatatta 53888615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 558 - 618
Target Start/End: Original strand, 16883410 - 16883470
Alignment:
Q  558 tttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||||||| | ||||||||||| |||||  |||||||||||  ||||||||    
T  16883410 tttatatgaattcttcaaatttaatctatgttgttatattatttttaaaataaaaaatata 16883470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 544 - 620
Target Start/End: Original strand, 32700374 - 32700450
Alignment:
Q  544 agaattttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatt 620  Q
    |||||||||||||||||||||||||||||   ||  ||| ||| || |||||| ||| |||||||| ||||||||||    
T  32700374 agaattttgaaaggtttatatgaattctttctgttcaatttatattgttataatattcttaaaatttaaaatatatt 32700450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 557 - 621
Target Start/End: Original strand, 40674171 - 40674235
Alignment:
Q  557 gtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||| || | |||| |||||| |||||| ||| |||||||| |||||||||||    
T  40674171 gtttatatgaattctttaaatttaatatatgttgttataatattcttaaaattaaaaatatatta 40674235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 560 - 618
Target Start/End: Original strand, 30996142 - 30996201
Alignment:
Q  560 tatatgaattcttcaagtataatctatgtt-attataacatttttaaaattgaaaatata 618  Q
    |||||||||||||||| | |||||| |||| ||||||| |||||||||||| ||||||||    
T  30996142 tatatgaattcttcaaatttaatctttgtttattataatatttttaaaattaaaaatata 30996201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 565 - 616
Target Start/End: Complemental strand, 33900724 - 33900673
Alignment:
Q  565 gaattcttcaagtataatctatgttattataacatttttaaaattgaaaata 616  Q
    ||||||||||| | ||||||||||| |||||| |||||||||||| ||||||    
T  33900724 gaattcttcaaatttaatctatgttgttataatatttttaaaattaaaaata 33900673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 554 - 621
Target Start/End: Complemental strand, 44412175 - 44412108
Alignment:
Q  554 aaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||| || || |  |||||||||| |||||| |||||||||||| ||| |||||||    
T  44412175 aaggtttatatgaattttttaaattcaatctatgttgttataatatttttaaaattaaaagtatatta 44412108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 558 - 621
Target Start/End: Original strand, 46891451 - 46891514
Alignment:
Q  558 tttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||| |||||||||| | |||| |||||| |||||| ||| |||||||| |||||||||||    
T  46891451 tttatataaattcttcaaatttaatatatgttgttataatattcttaaaattaaaaatatatta 46891514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 558 - 621
Target Start/End: Original strand, 49304273 - 49304336
Alignment:
Q  558 tttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||| |  || |||||||||||||| |||  ||||||| |||||||||||    
T  49304273 tttatatgaattcttcaaattcaacctatgttattataatattcataaaattaaaaatatatta 49304336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 568 - 618
Target Start/End: Complemental strand, 19793469 - 19793419
Alignment:
Q  568 ttcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||| | ||||||||||||||| || |||||||||||| ||||||||    
T  19793469 ttcttcaaatttaatctatgttattaaaatatttttaaaattaaaaatata 19793419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 556 - 618
Target Start/End: Complemental strand, 34729355 - 34729293
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    ||||||||||||||||| || | |||| ||||||||||||  |||| ||||||| ||||||||    
T  34729355 ggtttatatgaattcttaaaatttaatatatgttattatattatttgtaaaattaaaaatata 34729293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 548 - 618
Target Start/End: Original strand, 35989161 - 35989231
Alignment:
Q  548 ttttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    ||||||| | |||||||||||||||||| | |||||||| || |||||  |||||||||||  ||||||||    
T  35989161 ttttgaaggatttatatgaattcttcaaatttaatctatattgttatattatttttaaaataaaaaatata 35989231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 556 - 618
Target Start/End: Original strand, 37545241 - 37545303
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||||||||| ||||| |||||| ||||||  ||||| ||| |||||||| ||||||||    
T  37545241 ggtttatatgaattattcaaatataatatatgttgctataaaattcttaaaatttaaaatata 37545303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 551 - 621
Target Start/End: Complemental strand, 41962000 - 41961930
Alignment:
Q  551 tgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||| |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  41962000 tgaagggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 41961930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 2420722 - 2420787
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  2420722 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 2420787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 621
Target Start/End: Complemental strand, 15499325 - 15499252
Alignment:
Q  548 ttttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    ||||||| |||||| || |||| ||||| | ||||||||||  |||||| ||| |||||||| |||||||||||    
T  15499325 ttttgaagggtttacataaatttttcaaatttaatctatgtagttataatattcttaaaatttaaaatatatta 15499252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 609
Target Start/End: Complemental strand, 27055922 - 27055869
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaatt 609  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||||||||||||    
T  27055922 ggtttatatgaatttttcaaattcaatctatgttgttataatatttttaaaatt 27055869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 32858893 - 32858958
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||| |||||||| |||| | ||||||||||  |||||| ||| |||||||| |||||||||||    
T  32858893 ggtttacatgaattcatcaaatttaatctatgtagttataatattcttaaaattaaaaatatatta 32858958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 39499261 - 39499326
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  39499261 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 39499326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 43007540 - 43007475
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  43007540 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 43007475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 46312438 - 46312373
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  ||||||||||  ||||| |||||||||||| ||| |||||||    
T  46312438 ggtttatatgaatttttcaaattcaatctatgttgctataatatttttaaaattaaaagtatatta 46312373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 47714691 - 47714626
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  47714691 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 47714626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 47789464 - 47789399
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  47789464 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 47789399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 54126323 - 54126388
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||| ||||||||||||| | ||||| ||||| |||||| ||| |||||||  |||||||||||    
T  54126323 ggtttacatgaattcttcaaatttaatcgatgttgttataatattgttaaaataaaaaatatatta 54126388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 54372594 - 54372529
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||||||||| |  | |||||||| |||||| |||  ||||||| |||||||||||    
T  54372594 ggtttatatgaattcttcaaattcagtctatgttgttataatattcctaaaattaaaaatatatta 54372529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 579 - 620
Target Start/End: Complemental strand, 54877803 - 54877762
Alignment:
Q  579 taatctatgttattataacatttttaaaattgaaaatatatt 620  Q
    |||||||| ||||||| |||||||||||||| ||||||||||    
T  54877803 taatctatattattatgacatttttaaaattaaaaatatatt 54877762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 547 - 618
Target Start/End: Original strand, 37175 - 37246
Alignment:
Q  547 attttgaaaggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||| | |||||||||||||||||||| | |||| |||||| |||||  |||||||||||| ||||||||    
T  37175 attttggagggtttatatgaattcttcaaatttaatatatgttgttatattatttttaaaattaaaaatata 37246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 1641 - 1706
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| |||||||||||    
T  1641 ggtttatatgaatttttcaaatccaatctatgttgttataatattcttaaaattaaaaatatatta 1706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 556 - 616
Target Start/End: Complemental strand, 214 - 154
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaata 616  Q
    |||| ||| ||||||||||| | ||||||||||| |||||| |||||||||||| ||||||    
T  214 ggttaataagaattcttcaaatttaatctatgttgttataatatttttaaaattaaaaata 154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 556 - 618
Target Start/End: Original strand, 3302 - 3363
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatata 618  Q
    |||||||| ||||||||||| | ||||||||||| |||||| | |||||||||| ||||||||    
T  3302 ggtttatacgaattcttcaattttaatctatgttgttataata-ttttaaaattaaaaatata 3363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 31; Significance: 0.0000001; HSPs: 4)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 556 - 614
Target Start/End: Complemental strand, 3586 - 3528
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaa 614  Q
    |||| ||||||||||||||| | |||||||| || |||||| |||||||||||| ||||    
T  3586 ggttaatatgaattcttcaaatttaatctatcttgttataatatttttaaaattaaaaa 3528  T

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Target: scaffold0051; HSP #2
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 556 - 614
Target Start/End: Complemental strand, 6775 - 6717
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaa 614  Q
    |||| ||||||||||||||| | |||||||| || |||||| |||||||||||| ||||    
T  6775 ggttaatatgaattcttcaaatttaatctatcttgttataatatttttaaaattaaaaa 6717  T

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Target: scaffold0051; HSP #3
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 556 - 614
Target Start/End: Complemental strand, 7758 - 7700
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaa 614  Q
    |||| ||||||||||||||| | |||||||| || |||||| |||||||||||| ||||    
T  7758 ggttaatatgaattcttcaaatttaatctatcttgttataatatttttaaaattaaaaa 7700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 709 - 644
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||| ||||||||||||||| | |||||||| || |||||| |||||||||||  |||| ||||||    
T  709 ggttaatatgaattcttcaaatttaatctatcttgttataatatttttaaaatgaaaaacatatta 644  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 35473 - 35408
Alignment:
Q  556 ggtttatatgaattcttcaagtataatctatgttattataacatttttaaaattgaaaatatatta 621  Q
    |||||||||||||| ||||| |  |||||||||| |||||| ||| |||||||| ||| |||||||    
T  35473 ggtttatatgaatttttcaaattcaatctatgttgttataatattcttaaaattaaaagtatatta 35408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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