View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4280-Insertion-18 (Length: 218)
Name: NF4280-Insertion-18
Description: NF4280
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4280-Insertion-18 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 41735864 - 41735647
Alignment:
| Q |
1 |
agttatgtttgtggtaatccatatcatcatgcacctcccagctcccattccaaacaatttataattaaccacatcaatagtgtcacctcattcagtcaag |
100 |
Q |
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| T |
41735864 |
agttatgtttgtggtaatccatatcatcatgcacctcccagctcccattccaaacaatttataattaaccacatcaatagtgtcacctcattcagtcaag |
41735765 |
T |
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| Q |
101 |
ttagctttaagaggattgtctttcctcttgcgatgtttgcactgaggtgcatgatgacctggcttaccacaaaggcgggcatagtaacacgaggaacata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
41735764 |
ttagctttaagaggattgtctttcctcttgcgatgtttgcactgaggtgcatgatgacctggcttaccacaaaggcggccatagtaacacgaggaacata |
41735665 |
T |
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| Q |
201 |
attgtcgcatggtatgtg |
218 |
Q |
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|||||||||||||||||| |
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| T |
41735664 |
attgtcgcatggtatgtg |
41735647 |
T |
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