View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4280-Insertion-48 (Length: 148)
Name: NF4280-Insertion-48
Description: NF4280
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4280-Insertion-48 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 393622 - 393770
Alignment:
| Q |
1 |
gataatggcggtgtaagttgtcttagctcattgagtatgaaagtcttggttctttgatttttggttcatcctggttttatgctctaaactttctgtagtc |
100 |
Q |
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| T |
393622 |
gataatggcggtgtaagttgtcttagctcattgagtatgaaagtcttggttctttgatttttggttcatcctggttttatgacctaaactttctgtagtc |
393721 |
T |
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| Q |
101 |
-aaaagcataatttatggcgccaaaataaagagtttattccttgtagta |
148 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
393722 |
aaaaagcataatttatggcgccaaaataaagagtttattccttgtagta |
393770 |
T |
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