View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4281_high_13 (Length: 225)

Name: NF4281_high_13
Description: NF4281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4281_high_13
NF4281_high_13
[»] scaffold0411 (1 HSPs)
scaffold0411 (19-225)||(12345-12567)
[»] scaffold0171 (1 HSPs)
scaffold0171 (19-225)||(27199-27404)
[»] chr6 (54 HSPs)
chr6 (19-225)||(12715227-12715433)
chr6 (19-225)||(34451476-34451681)
chr6 (19-150)||(13435759-13435889)
chr6 (19-225)||(15531415-15531637)
chr6 (19-225)||(19624115-19624319)
chr6 (19-224)||(9717980-9718200)
chr6 (19-225)||(23284700-23284920)
chr6 (19-225)||(21625236-21625455)
chr6 (19-141)||(24117064-24117185)
chr6 (19-224)||(14100265-14100452)
chr6 (108-225)||(29918153-29918269)
chr6 (19-225)||(20112506-20112713)
chr6 (110-225)||(32544401-32544518)
chr6 (19-225)||(21235249-21235454)
chr6 (116-225)||(26972130-26972241)
chr6 (89-225)||(13602308-13602460)
chr6 (19-225)||(16264958-16265163)
chr6 (19-225)||(19086284-19086507)
chr6 (19-225)||(20730512-20730717)
chr6 (19-225)||(22802277-22802482)
chr6 (144-224)||(25597616-25597695)
chr6 (19-145)||(10640229-10640353)
chr6 (21-124)||(15302422-15302526)
chr6 (154-225)||(13435668-13435738)
chr6 (21-84)||(25597754-25597817)
chr6 (129-225)||(15987370-15987465)
chr6 (19-67)||(15987503-15987551)
chr6 (116-219)||(18435698-18435803)
chr6 (103-150)||(19470894-19470941)
chr6 (19-89)||(18435861-18435931)
chr6 (19-89)||(32544555-32544625)
chr6 (76-168)||(19065892-19065986)
chr6 (140-224)||(19688903-19688984)
chr6 (157-225)||(15302336-15302403)
chr6 (154-225)||(24116964-24117035)
chr6 (26-136)||(15954928-15955038)
chr6 (103-168)||(17608214-17608282)
chr6 (88-150)||(26943789-26943851)
chr6 (19-84)||(19689008-19689073)
chr6 (37-136)||(33351754-33351853)
chr6 (76-134)||(19832867-19832924)
chr6 (19-57)||(23298259-23298297)
chr6 (76-137)||(17381653-17381713)
chr6 (19-84)||(18378545-18378610)
chr6 (108-137)||(21618483-21618512)
chr6 (19-56)||(25592838-25592875)
chr6 (108-137)||(26589847-26589876)
chr6 (76-136)||(139233-139292)
chr6 (76-136)||(147254-147313)
chr6 (19-67)||(3680785-3680833)
chr6 (76-136)||(12423446-12423505)
chr6 (19-55)||(13602476-13602512)
chr6 (108-136)||(16877438-16877466)
chr6 (19-67)||(26943854-26943902)
[»] scaffold0022 (3 HSPs)
scaffold0022 (19-223)||(39563-39768)
scaffold0022 (19-223)||(137623-137828)
scaffold0022 (19-150)||(159296-159424)
[»] chr2 (68 HSPs)
chr2 (34-225)||(28140399-28140589)
chr2 (19-225)||(23235137-23235358)
chr2 (19-225)||(30667119-30667340)
chr2 (19-225)||(9015120-9015340)
chr2 (19-225)||(25829264-25829455)
chr2 (19-225)||(20568498-20568720)
chr2 (19-149)||(22260626-22260756)
chr2 (19-151)||(24850415-24850545)
chr2 (34-150)||(40782690-40782806)
chr2 (25-225)||(39037412-39037612)
chr2 (19-225)||(19540546-19540749)
chr2 (19-225)||(20151799-20152005)
chr2 (26-151)||(22454747-22454870)
chr2 (89-225)||(22187920-22188072)
chr2 (21-151)||(25037019-25037139)
chr2 (21-151)||(25041126-25041246)
chr2 (89-225)||(10009569-10009719)
chr2 (108-224)||(13963829-13963947)
chr2 (19-100)||(38631224-38631305)
chr2 (19-151)||(38781617-38781731)
chr2 (19-84)||(24377356-24377421)
chr2 (144-223)||(7609094-7609172)
chr2 (103-225)||(18376752-18376876)
chr2 (19-149)||(21536998-21537126)
chr2 (154-225)||(21537148-21537218)
chr2 (111-225)||(22317724-22317840)
chr2 (21-136)||(24576284-24576398)
chr2 (19-121)||(30621437-30621538)
chr2 (19-121)||(30624058-30624159)
chr2 (19-84)||(22187868-22187933)
chr2 (19-67)||(18376686-18376734)
chr2 (157-225)||(22260536-22260603)
chr2 (153-225)||(25037158-25037229)
chr2 (153-225)||(25041265-25041336)
chr2 (34-84)||(10009532-10009582)
chr2 (26-84)||(23184103-23184161)
chr2 (26-84)||(23595360-23595418)
chr2 (76-196)||(44840582-44840699)
chr2 (19-84)||(13963759-13963824)
chr2 (76-137)||(33074459-33074519)
chr2 (19-150)||(22272351-22272480)
chr2 (158-225)||(24850569-24850636)
chr2 (153-225)||(30621346-30621417)
chr2 (153-225)||(30623967-30624038)
chr2 (19-67)||(44881451-44881499)
chr2 (115-150)||(7609181-7609216)
chr2 (26-136)||(28711468-28711578)
chr2 (27-218)||(6573895-6574085)
chr2 (19-89)||(22317893-22317963)
chr2 (144-225)||(24576165-24576246)
chr2 (26-84)||(25189638-25189696)
chr2 (26-67)||(18703075-18703116)
chr2 (76-136)||(6392854-6392913)
chr2 (19-67)||(19115427-19115475)
chr2 (76-136)||(22776137-22776196)
chr2 (76-136)||(22781515-22781574)
chr2 (19-59)||(26618856-26618896)
chr2 (76-136)||(28550750-28550809)
chr2 (76-136)||(30557111-30557170)
chr2 (76-136)||(40332297-40332356)
chr2 (19-67)||(41121503-41121551)
chr2 (77-135)||(22802693-22802750)
chr2 (76-122)||(38631184-38631230)
chr2 (76-137)||(31800709-31800769)
chr2 (19-55)||(20569774-20569810)
chr2 (110-150)||(24576255-24576295)
chr2 (180-224)||(24779474-24779518)
chr2 (170-218)||(38781536-38781583)
[»] chr7 (74 HSPs)
chr7 (19-218)||(2913426-2913627)
chr7 (19-225)||(2500170-2500378)
chr7 (19-222)||(30026040-30026244)
chr7 (19-225)||(44467196-44467403)
chr7 (19-225)||(33691531-33691738)
chr7 (19-151)||(11319627-11319758)
chr7 (19-151)||(13880326-13880457)
chr7 (19-225)||(15088652-15088842)
chr7 (19-150)||(13692563-13692694)
chr7 (126-225)||(4494638-4494736)
chr7 (35-150)||(14193297-14193412)
chr7 (21-225)||(12366557-12366774)
chr7 (89-225)||(13730566-13730701)
chr7 (19-223)||(10882978-10883197)
chr7 (19-136)||(13648935-13649052)
chr7 (19-225)||(13260429-13260648)
chr7 (103-225)||(21695533-21695657)
chr7 (19-150)||(28409261-28409387)
chr7 (19-89)||(48800446-48800516)
chr7 (19-225)||(13137729-13137921)
chr7 (25-225)||(22577832-22578047)
chr7 (19-137)||(13880827-13880943)
chr7 (126-225)||(21692419-21692517)
chr7 (26-135)||(14426752-14426860)
chr7 (144-224)||(13302943-13303022)
chr7 (154-225)||(21283329-21283399)
chr7 (108-225)||(48236811-48236928)
chr7 (19-151)||(11793129-11793260)
chr7 (113-225)||(9069694-9069808)
chr7 (144-225)||(11793039-11793119)
chr7 (144-217)||(15468056-15468128)
chr7 (19-150)||(9098050-9098179)
chr7 (108-225)||(28622265-28622382)
chr7 (22-84)||(4494761-4494823)
chr7 (89-225)||(16316433-16316583)
chr7 (19-210)||(29935183-29935370)
chr7 (19-136)||(30945194-30945310)
chr7 (153-225)||(13880236-13880307)
chr7 (144-224)||(23279905-23279983)
chr7 (20-84)||(24788381-24788445)
chr7 (34-149)||(5000675-5000789)
chr7 (144-225)||(9709750-9709828)
chr7 (32-150)||(19236831-19236947)
chr7 (89-151)||(13303060-13303122)
chr7 (140-225)||(30944267-30944349)
chr7 (19-84)||(16316381-16316446)
chr7 (144-225)||(24788273-24788353)
chr7 (140-224)||(30945300-30945381)
chr7 (157-225)||(11319537-11319604)
chr7 (157-225)||(13648861-13648928)
chr7 (157-225)||(13692474-13692541)
chr7 (19-67)||(13890751-13890799)
chr7 (154-225)||(28409171-28409241)
chr7 (19-121)||(9709638-9709739)
chr7 (76-218)||(7339762-7339893)
chr7 (22-150)||(13031894-13032020)
chr7 (76-136)||(1293185-1293244)
chr7 (103-147)||(15468142-15468186)
chr7 (110-150)||(21283270-21283310)
chr7 (32-84)||(41842125-41842177)
chr7 (179-217)||(19237024-19237062)
chr7 (26-136)||(30944168-30944277)
chr7 (76-137)||(4821708-4821768)
chr7 (88-137)||(8183164-8183213)
chr7 (19-84)||(13303109-13303174)
chr7 (187-224)||(13472568-13472605)
chr7 (76-168)||(19339137-19339231)
chr7 (26-67)||(35952483-35952524)
chr7 (103-136)||(39284467-39284500)
chr7 (76-136)||(5826185-5826244)
chr7 (19-51)||(13730515-13730547)
chr7 (108-136)||(27871931-27871959)
chr7 (32-84)||(39284414-39284466)
chr7 (89-137)||(48062704-48062752)
[»] chr5 (41 HSPs)
chr5 (19-225)||(26784486-26784694)
chr5 (19-225)||(17815100-17815320)
chr5 (19-225)||(20551026-20551215)
chr5 (34-225)||(41566247-41566439)
chr5 (20-225)||(23412792-23412979)
chr5 (34-225)||(19536101-19536305)
chr5 (19-223)||(21910690-21910879)
chr5 (103-225)||(6512314-6512436)
chr5 (25-225)||(33022796-33022995)
chr5 (26-151)||(21099497-21099620)
chr5 (147-225)||(13545448-13545525)
chr5 (19-225)||(89237-89427)
chr5 (25-143)||(642499-642615)
chr5 (26-219)||(9398551-9398744)
chr5 (26-135)||(5430106-5430214)
chr5 (19-151)||(23881288-23881418)
chr5 (25-84)||(12352625-12352684)
chr5 (26-225)||(31118009-31118206)
chr5 (26-136)||(14086344-14086453)
chr5 (19-210)||(21072041-21072231)
chr5 (108-151)||(12352690-12352733)
chr5 (32-67)||(21198835-21198870)
chr5 (19-136)||(4887243-4887360)
chr5 (25-67)||(6499525-6499567)
chr5 (88-150)||(25096661-25096723)
chr5 (88-150)||(25154631-25154693)
chr5 (76-196)||(28464206-28464325)
chr5 (19-80)||(7745447-7745508)
chr5 (76-137)||(26759399-26759459)
chr5 (37-137)||(29138210-29138310)
chr5 (110-150)||(7745569-7745609)
chr5 (19-67)||(25096611-25096659)
chr5 (19-67)||(25154581-25154629)
chr5 (103-135)||(33933523-33933555)
chr5 (145-224)||(7745619-7745697)
chr5 (108-210)||(21198893-21198995)
chr5 (102-137)||(32161002-32161037)
chr5 (76-137)||(23391471-23391531)
chr5 (19-67)||(23478678-23478727)
chr5 (76-137)||(42243916-42243976)
chr5 (37-136)||(30115692-30115792)
[»] chr1 (59 HSPs)
chr1 (19-225)||(22599905-22600127)
chr1 (19-136)||(16235035-16235152)
chr1 (19-150)||(2268753-2268884)
chr1 (40-151)||(23036273-23036384)
chr1 (23-225)||(33256080-33256296)
chr1 (23-225)||(33276252-33276468)
chr1 (40-151)||(35402032-35402143)
chr1 (19-225)||(10757556-10757760)
chr1 (19-218)||(36134331-36134530)
chr1 (103-225)||(28492225-28492349)
chr1 (76-225)||(20954253-20954418)
chr1 (19-148)||(21191604-21191731)
chr1 (144-225)||(22153992-22154072)
chr1 (34-137)||(12284678-12284780)
chr1 (35-225)||(32785692-32785882)
chr1 (26-150)||(12613527-12613649)
chr1 (147-222)||(38282704-38282778)
chr1 (144-225)||(1900480-1900560)
chr1 (19-84)||(1578124-1578189)
chr1 (140-225)||(22201597-22201681)
chr1 (19-67)||(20954178-20954226)
chr1 (140-225)||(2267224-2267306)
chr1 (47-225)||(7309953-7310132)
chr1 (144-225)||(19717659-19717739)
chr1 (89-150)||(19717748-19717809)
chr1 (115-225)||(22427192-22427302)
chr1 (26-225)||(26701875-26702074)
chr1 (144-221)||(48704343-48704419)
chr1 (19-84)||(48704491-48704556)
chr1 (145-225)||(1578002-1578081)
chr1 (122-225)||(12284558-12284661)
chr1 (19-137)||(17024706-17024822)
chr1 (25-124)||(30893314-30893412)
chr1 (19-89)||(1900619-1900689)
chr1 (154-224)||(2268664-2268733)
chr1 (19-84)||(22154165-22154230)
chr1 (157-218)||(23036405-23036465)
chr1 (110-151)||(48704427-48704468)
chr1 (19-67)||(18896312-18896360)
chr1 (39-136)||(21029019-21029114)
chr1 (179-225)||(29215932-29215978)
chr1 (77-147)||(38282795-38282864)
chr1 (19-84)||(19717796-19717861)
chr1 (76-137)||(21703051-21703111)
chr1 (157-214)||(35401955-35402011)
chr1 (89-137)||(46089218-46089266)
chr1 (179-225)||(39200891-39200937)
chr1 (103-136)||(21984811-21984844)
chr1 (19-56)||(24227712-24227749)
chr1 (108-137)||(34255341-34255370)
chr1 (19-48)||(35402146-35402175)
chr1 (103-136)||(42284842-42284875)
chr1 (76-137)||(48570014-48570074)
chr1 (76-136)||(2327206-2327265)
chr1 (103-135)||(21134991-21135023)
chr1 (76-136)||(23024984-23025043)
chr1 (76-136)||(25448331-25448390)
chr1 (154-225)||(30893227-30893298)
chr1 (88-136)||(44821353-44821401)
[»] scaffold0193 (1 HSPs)
scaffold0193 (25-225)||(15930-16130)
[»] scaffold0290 (1 HSPs)
scaffold0290 (19-225)||(18375-18596)
[»] chr4 (54 HSPs)
chr4 (19-225)||(45833524-45833746)
chr4 (19-225)||(56034704-56034909)
chr4 (19-225)||(16632570-16632789)
chr4 (19-225)||(29680319-29680525)
chr4 (19-225)||(14833526-14833743)
chr4 (19-225)||(14604668-14604887)
chr4 (19-225)||(19620853-19621042)
chr4 (19-137)||(9141095-9141213)
chr4 (19-150)||(12601320-12601451)
chr4 (24-225)||(19884832-19885036)
chr4 (19-137)||(37435282-37435399)
chr4 (19-150)||(6641902-6642031)
chr4 (19-222)||(10073068-10073273)
chr4 (144-225)||(37435436-37435516)
chr4 (144-224)||(23123562-23123641)
chr4 (108-225)||(413132-413249)
chr4 (144-225)||(12811079-12811159)
chr4 (87-151)||(40846319-40846383)
chr4 (115-225)||(3483851-3483963)
chr4 (19-66)||(12810955-12811002)
chr4 (179-225)||(22675455-22675501)
chr4 (164-225)||(12601231-12601291)
chr4 (140-225)||(19911777-19911861)
chr4 (19-84)||(55380528-55380593)
chr4 (145-225)||(3395720-3395799)
chr4 (19-67)||(17540721-17540769)
chr4 (144-225)||(13576017-13576095)
chr4 (19-89)||(3395906-3395976)
chr4 (159-225)||(19666502-19666567)
chr4 (156-222)||(37985525-37985590)
chr4 (144-225)||(14904257-14904337)
chr4 (76-136)||(14571243-14571302)
chr4 (111-225)||(17247373-17247487)
chr4 (19-67)||(17787798-17787846)
chr4 (32-84)||(40846368-40846420)
chr4 (26-121)||(54680147-54680241)
chr4 (140-210)||(55380434-55380504)
chr4 (79-168)||(10693035-10693126)
chr4 (79-168)||(10906801-10906892)
chr4 (19-121)||(13575905-13576006)
chr4 (19-67)||(41114514-41114562)
chr4 (76-135)||(8105889-8105947)
chr4 (154-225)||(15139357-15139427)
chr4 (144-210)||(23750664-23750730)
chr4 (170-224)||(9141043-9141096)
chr4 (25-63)||(11916027-11916065)
chr4 (26-67)||(3497936-3497977)
chr4 (103-136)||(6517704-6517737)
chr4 (26-67)||(16853782-16853823)
chr4 (103-136)||(17398543-17398576)
chr4 (103-136)||(22191057-22191090)
chr4 (76-136)||(3105270-3105329)
chr4 (76-136)||(20977648-20977707)
chr4 (89-149)||(22089809-22089869)
[»] scaffold0861 (1 HSPs)
scaffold0861 (19-224)||(4701-4921)
[»] scaffold1434 (1 HSPs)
scaffold1434 (34-225)||(556-761)
[»] scaffold0084 (2 HSPs)
scaffold0084 (19-225)||(32621-32829)
scaffold0084 (19-225)||(49468-49674)
[»] chr8 (62 HSPs)
chr8 (19-225)||(19156324-19156531)
chr8 (35-225)||(16681122-16681326)
chr8 (19-225)||(29693443-29693666)
chr8 (19-225)||(18120926-18121132)
chr8 (19-225)||(20382198-20382417)
chr8 (34-225)||(18679943-18680132)
chr8 (19-225)||(17441625-17441831)
chr8 (21-151)||(17914677-17914806)
chr8 (25-225)||(33082985-33083199)
chr8 (19-150)||(17267690-17267820)
chr8 (19-223)||(20255370-20255586)
chr8 (19-151)||(19943455-19943586)
chr8 (19-150)||(17525532-17525662)
chr8 (113-225)||(21933011-21933125)
chr8 (19-225)||(24646466-24646686)
chr8 (103-225)||(12757662-12757786)
chr8 (144-225)||(16207434-16207514)
chr8 (19-225)||(602537-602743)
chr8 (144-224)||(22745616-22745695)
chr8 (144-225)||(18321102-18321182)
chr8 (19-225)||(17701873-17702075)
chr8 (19-150)||(19707722-19707851)
chr8 (22-225)||(39693663-39693881)
chr8 (110-225)||(23185134-23185249)
chr8 (154-225)||(19943364-19943435)
chr8 (140-218)||(23263550-23263628)
chr8 (179-225)||(30421405-30421451)
chr8 (19-84)||(18320993-18321058)
chr8 (44-150)||(23263438-23263545)
chr8 (103-151)||(22745705-22745753)
chr8 (19-84)||(16189283-16189348)
chr8 (19-67)||(16207556-16207604)
chr8 (19-67)||(22461432-22461480)
chr8 (154-225)||(16189112-16189182)
chr8 (43-137)||(17797653-17797745)
chr8 (26-151)||(18730786-18730909)
chr8 (19-89)||(21933180-21933250)
chr8 (76-168)||(13430511-13430605)
chr8 (153-221)||(17525680-17525748)
chr8 (144-225)||(18719129-18719209)
chr8 (34-136)||(18719203-18719300)
chr8 (76-137)||(22674009-22674069)
chr8 (76-137)||(36105441-36105501)
chr8 (76-137)||(40845248-40845308)
chr8 (76-137)||(43640005-43640065)
chr8 (76-136)||(14989335-14989394)
chr8 (157-225)||(17914587-17914654)
chr8 (88-136)||(18151551-18151599)
chr8 (19-67)||(18772929-18772977)
chr8 (76-136)||(21288611-21288670)
chr8 (76-135)||(6407934-6407992)
chr8 (111-150)||(16189201-16189240)
chr8 (154-225)||(17267602-17267671)
chr8 (21-151)||(2811037-2811168)
chr8 (26-60)||(18685221-18685255)
chr8 (26-151)||(18722441-18722564)
chr8 (19-123)||(19956153-19956256)
chr8 (19-89)||(30421244-30421314)
chr8 (103-136)||(1745368-1745401)
chr8 (19-67)||(21541289-21541338)
chr8 (19-56)||(23772679-23772716)
chr8 (76-136)||(24551521-24551580)
[»] chr3 (67 HSPs)
chr3 (19-225)||(14969462-14969670)
chr3 (19-225)||(52920540-52920761)
chr3 (19-151)||(15903424-15903555)
chr3 (35-225)||(2561323-2561514)
chr3 (19-225)||(14392809-14393028)
chr3 (19-225)||(41495134-41495330)
chr3 (34-221)||(12962919-12963105)
chr3 (19-151)||(13948561-13948692)
chr3 (19-225)||(6090867-6091088)
chr3 (19-163)||(22803904-22804046)
chr3 (19-151)||(31303611-31303745)
chr3 (19-150)||(16199615-16199744)
chr3 (19-151)||(20646380-20646511)
chr3 (19-143)||(13824265-13824390)
chr3 (19-137)||(37467541-37467658)
chr3 (26-225)||(11223698-11223896)
chr3 (40-218)||(25398098-25398290)
chr3 (111-225)||(28582241-28582357)
chr3 (19-225)||(49642582-49642786)
chr3 (19-225)||(17238757-17238946)
chr3 (19-225)||(47405254-47405445)
chr3 (19-151)||(29951242-29951372)
chr3 (19-151)||(30000396-30000526)
chr3 (140-221)||(38177583-38177663)
chr3 (140-225)||(18142692-18142776)
chr3 (154-225)||(12726184-12726254)
chr3 (111-225)||(18121530-18121646)
chr3 (179-225)||(40800009-40800055)
chr3 (19-84)||(16032771-16032836)
chr3 (160-225)||(31303521-31303585)
chr3 (157-225)||(13948471-13948538)
chr3 (159-223)||(15903336-15903399)
chr3 (111-225)||(19888854-19888969)
chr3 (19-67)||(26417494-26417542)
chr3 (153-224)||(20646290-20646361)
chr3 (25-67)||(12388685-12388727)
chr3 (88-150)||(12388729-12388791)
chr3 (19-137)||(18121424-18121541)
chr3 (76-137)||(49666276-49666336)
chr3 (19-67)||(20725400-20725448)
chr3 (144-223)||(16658562-16658640)
chr3 (153-224)||(37467469-37467539)
chr3 (76-135)||(40851184-40851242)
chr3 (154-225)||(49553443-49553513)
chr3 (21-85)||(38177493-38177558)
chr3 (25-85)||(49553298-49553359)
chr3 (76-137)||(50300440-50300500)
chr3 (193-225)||(13780576-13780608)
chr3 (170-218)||(13824211-13824258)
chr3 (45-121)||(16658475-16658551)
chr3 (19-67)||(19249216-19249264)
chr3 (19-67)||(20627282-20627330)
chr3 (172-224)||(29951410-29951461)
chr3 (172-224)||(30000564-30000615)
chr3 (76-136)||(30054102-30054161)
chr3 (76-136)||(46796253-46796312)
chr3 (144-218)||(47207849-47207920)
chr3 (19-89)||(47207996-47208066)
chr3 (19-67)||(11908768-11908817)
chr3 (19-56)||(14073003-14073040)
chr3 (76-137)||(14955680-14955740)
chr3 (88-137)||(21636551-21636600)
chr3 (76-137)||(46349705-46349765)
chr3 (26-67)||(50300526-50300567)
chr3 (76-136)||(33583485-33583544)
chr3 (76-136)||(33598105-33598164)
chr3 (24-84)||(40800117-40800177)
[»] scaffold0251 (1 HSPs)
scaffold0251 (19-225)||(7839-8046)
[»] scaffold0047 (2 HSPs)
scaffold0047 (19-225)||(30360-30577)
scaffold0047 (25-69)||(10175-10219)
[»] scaffold0005 (4 HSPs)
scaffold0005 (19-225)||(5956-6173)
scaffold0005 (19-150)||(212580-212710)
scaffold0005 (156-225)||(212491-212559)
scaffold0005 (76-136)||(246074-246133)
[»] scaffold0771 (2 HSPs)
scaffold0771 (19-151)||(701-832)
scaffold0771 (157-225)||(611-678)
[»] scaffold0120 (2 HSPs)
scaffold0120 (19-225)||(36530-36750)
scaffold0120 (19-225)||(42255-42475)
[»] scaffold0334 (2 HSPs)
scaffold0334 (19-150)||(10020-10150)
scaffold0334 (154-223)||(9933-10001)
[»] scaffold0026 (4 HSPs)
scaffold0026 (19-225)||(60152-60372)
scaffold0026 (19-224)||(8063-8253)
scaffold0026 (35-150)||(115746-115860)
scaffold0026 (90-210)||(151714-151831)
[»] scaffold0023 (1 HSPs)
scaffold0023 (19-225)||(103708-103913)
[»] scaffold0116 (1 HSPs)
scaffold0116 (19-225)||(20725-20946)
[»] scaffold0003 (1 HSPs)
scaffold0003 (19-219)||(89825-90024)
[»] scaffold0364 (1 HSPs)
scaffold0364 (19-210)||(6157-6346)
[»] scaffold0035 (2 HSPs)
scaffold0035 (19-150)||(19228-19358)
scaffold0035 (153-225)||(19376-19447)
[»] scaffold0210 (1 HSPs)
scaffold0210 (19-225)||(1796-1987)
[»] scaffold0359 (1 HSPs)
scaffold0359 (25-224)||(5452-5664)
[»] scaffold0227 (1 HSPs)
scaffold0227 (115-225)||(22812-22924)
[»] scaffold0004 (6 HSPs)
scaffold0004 (25-151)||(220463-220587)
scaffold0004 (90-225)||(377383-377534)
scaffold0004 (26-150)||(244015-244137)
scaffold0004 (154-225)||(220373-220443)
scaffold0004 (19-84)||(377330-377395)
scaffold0004 (19-55)||(30625-30661)
[»] scaffold0426 (2 HSPs)
scaffold0426 (19-137)||(13850-13968)
scaffold0426 (191-225)||(13707-13741)
[»] scaffold0479 (2 HSPs)
scaffold0479 (89-225)||(10105-10241)
scaffold0479 (35-67)||(10245-10277)
[»] scaffold0217 (3 HSPs)
scaffold0217 (109-225)||(19167-19285)
scaffold0217 (19-67)||(19343-19391)
scaffold0217 (76-137)||(21928-21988)
[»] scaffold0146 (1 HSPs)
scaffold0146 (19-225)||(15253-15442)
[»] scaffold1359 (1 HSPs)
scaffold1359 (26-135)||(449-557)
[»] scaffold0261 (1 HSPs)
scaffold0261 (19-225)||(5708-5915)
[»] scaffold0243 (3 HSPs)
scaffold0243 (151-225)||(4895-4968)
scaffold0243 (19-84)||(4764-4829)
scaffold0243 (89-151)||(4816-4878)
[»] scaffold0161 (1 HSPs)
scaffold0161 (19-225)||(9891-10083)
[»] scaffold0083 (3 HSPs)
scaffold0083 (144-225)||(25870-25950)
scaffold0083 (19-84)||(25746-25811)
scaffold0083 (89-151)||(25798-25860)
[»] scaffold0065 (3 HSPs)
scaffold0065 (19-136)||(1944-2060)
scaffold0065 (157-225)||(1826-1893)
scaffold0065 (110-150)||(1915-1955)
[»] scaffold0050 (1 HSPs)
scaffold0050 (19-136)||(35442-35562)
[»] scaffold0007 (2 HSPs)
scaffold0007 (111-225)||(143224-143340)
scaffold0007 (19-67)||(143399-143447)
[»] scaffold0249 (1 HSPs)
scaffold0249 (76-196)||(17602-17721)
[»] scaffold0395 (1 HSPs)
scaffold0395 (35-151)||(13304-13418)
[»] scaffold0337 (3 HSPs)
scaffold0337 (157-225)||(14784-14851)
scaffold0337 (19-136)||(14902-15018)
scaffold0337 (110-150)||(14873-14913)
[»] scaffold0247 (1 HSPs)
scaffold0247 (37-136)||(23350-23449)
[»] scaffold0064 (1 HSPs)
scaffold0064 (26-150)||(43666-43789)
[»] scaffold0056 (3 HSPs)
scaffold0056 (76-151)||(25486-25561)
scaffold0056 (103-150)||(36024-36071)
scaffold0056 (76-136)||(34640-34699)
[»] scaffold0485 (3 HSPs)
scaffold0485 (110-150)||(9252-9292)
scaffold0485 (19-84)||(9131-9195)
scaffold0485 (87-135)||(9214-9262)
[»] scaffold0081 (1 HSPs)
scaffold0081 (19-67)||(40953-41001)
[»] scaffold0066 (1 HSPs)
scaffold0066 (34-84)||(60654-60704)
[»] scaffold0471 (1 HSPs)
scaffold0471 (76-137)||(3558-3618)
[»] scaffold0275 (1 HSPs)
scaffold0275 (76-133)||(8511-8567)
[»] scaffold0473 (1 HSPs)
scaffold0473 (89-136)||(2551-2598)
[»] scaffold0211 (1 HSPs)
scaffold0211 (102-137)||(15454-15489)
[»] scaffold0324 (1 HSPs)
scaffold0324 (26-84)||(10229-10287)
[»] scaffold0043 (1 HSPs)
scaffold0043 (76-134)||(78193-78250)
[»] scaffold0025 (1 HSPs)
scaffold0025 (19-84)||(74855-74920)
[»] scaffold0016 (1 HSPs)
scaffold0016 (76-137)||(937-997)
[»] scaffold0012 (1 HSPs)
scaffold0012 (108-137)||(215340-215369)
[»] scaffold1331 (1 HSPs)
scaffold1331 (108-136)||(469-497)
[»] scaffold0439 (1 HSPs)
scaffold0439 (76-136)||(6537-6596)
[»] scaffold0040 (1 HSPs)
scaffold0040 (19-67)||(1259-1307)
[»] scaffold0011 (1 HSPs)
scaffold0011 (102-134)||(164767-164799)


Alignment Details
Target: scaffold0411 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 12567 - 12345
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||  |||||||||||||| ||||||| |||||||||||| |||||||||||    
T  12567 acaaaagagagtaatggaatcaacaaaaaggaagcttgaagcatttgaataaaagttctcctgaagataaaagtgctcctgagctgatgacgtcatcaga 12468  T
Q  119 agcaagttcatcagaagcatctcatca-----------------gaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatg 201  Q
    |||||||||||||||||||||||||||                 |||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  12467 agcaagttcatcagaagcatctcatcagaagttgaggatcaccagaagctctagttcatcaggagacacaagactt-aaagcttcaaaggctgttcaatg 12369  T
Q  202 aatttaatctcgtctaagcattgc 225  Q
    ||||||||||||||||||||||||    
T  12368 aatttaatctcgtctaagcattgc 12345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 27199 - 27404
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| || ||| || |||||| | |||||| ||||||  |||| || ||||||||    
T  27199 acaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgcttctgaaggc-aaagtgctcctgaagtgatgacatcatcaga 27297  T
Q  119 agcaagttcatcagaagc-atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtcta 217  Q
    |||||||||||||||||| |  ||| |||| |||  ||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||    
T  27298 agcaagttcatcagaagcaagatcaccagatgctgaagttcatcaggagatgcaagactt-aaagcttcaaaggttgttcaatgaatttaatctcgtcta 27396  T
Q  218 agcattgc 225  Q
    ||||||||    
T  27397 agcattgc 27404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 1e-52; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 12715227 - 12715433
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||| || ||| |||||||||||||||||| |||  || |||| |||||||||||    
T  12715227 acaaaagagagcaaagaaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagacaaaagtgttccgaag-tgatgacgtcatcaga 12715325  T
Q  119 agcaagttcatcagaagcatc-tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaa-ggctgttcaatgaatttaatctcgtct 216  Q
    || ||||||||||||||||   |||  ||||| | |||||||||||||||| ||||||||||| |||||||| |||||||||||| ||||||||||||||    
T  12715326 aggaagttcatcagaagcaagatcactagaagttgtagttcatcaggagatgcaagacttaaa-gcttcaaaaggctgttcaatggatttaatctcgtct 12715424  T
Q  217 aagcattgc 225  Q
    |||||||||    
T  12715425 aagcattgc 12715433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 34451476 - 34451681
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||| || ||  |||||||||||||||||| | ||||  |||| |||||||||||    
T  34451476 acaaaagagagcaaaggaatcagcaaaaaggaagcttgaagcatctgaagagaagcgctcctgaagacaaaagtgcttctgaagtgatgacgtcatcaga 34451575  T
Q  119 agcaagttcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    ||||||||||| |||||    ||| |||||||| |||||||||||||||| |||||||| |||| |||||||||||||||||| ||| | | ||||||||    
T  34451576 agcaagttcattagaagttgatcaccagaagctctagttcatcaggagatgcaagactt-aaagattcaaaggctgttcaatggattcagtatcgtctaa 34451674  T
Q  219 gcattgc 225  Q
    |||||||    
T  34451675 gcattgc 34451681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 13435889 - 13435759
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| |||  ||||||| ||||||  |||| |||||||||||    
T  13435889 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctaaag-taaaagtgctcctgaagtgatgacgtcatcaga 13435791  T
Q  119 agcaagttcatcagaagcatctcatcagaagc 150  Q
    ||||||||||||| ||||||||||||||||||    
T  13435790 agcaagttcatcaaaagcatctcatcagaagc 13435759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 15531415 - 15531637
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||| |||||||  |||||||||||||| |||||| ||||||||||| || ||  |||||| ||||||||||||||||||  |||| || | ||||||    
T  15531415 acaaaaaagagcaaatgaatcaacaaaaagaaagcttaaagcatctgaagagaagcgctcctgtagacaaaagtgatcctgaagtgatgacataatcaga 15531514  T
Q  119 agcaagttcatcagaagcatctcat-----------------cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatg 201  Q
    |||||||||||||||||||||||||                 |||||| | ||||||||||| |||| |||||||| ||||||| ||||| |||||||||    
T  15531515 agcaagttcatcagaagcatctcatcagaatcataagatcaccagaagttgtagttcatcagaagatgcaagactt-aaagcttgaaaggttgttcaatg 15531613  T
Q  202 aatttaatctcgtctaagcattgc 225  Q
    ||||||||||||||||||||||||    
T  15531614 aatttaatctcgtctaagcattgc 15531637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 19624319 - 19624115
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||| || ||| ||||||||| | |||||| |||| |  |||| |||||||||||    
T  19624319 acaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtc-aaagtgctcctaaagtgatgacgtcatcaga 19624221  T
Q  119 agcaagttcatcagaagc-atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtcta 217  Q
    ||| |  ||||||||| | |  ||| ||||||||  ||||||||||||||| |||| ||| ||||||||||||| ||||||||| ||| ||||||||| |    
T  19624220 agc-atctcatcagaaacaagatcaccagaagctgaagttcatcaggagatgcaagtctt-aaagcttcaaaggttgttcaatggattcaatctcgtcca 19624123  T
Q  218 agcattgc 225  Q
    ||||||||    
T  19624122 agcattgc 19624115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 224
Target Start/End: Complemental strand, 9718200 - 9717980
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||| |||| |||||| || | | ||||||||||| |||||| || |||  |||| |||||||||||    
T  9718200 acaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaactactcctgaagac-aaagtgctcttgaagtgatgacgtcatcaga 9718102  T
Q  119 agcaagttcatcagaagcatctcatc-----------------agaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatg 201  Q
    |||||||| |||| ||||||| ||||                 ||||||| |||||||||||||||| |||||||| ||||||||||||| |||||||||    
T  9718101 agcaagtttatcataagcatcccatcagaagttaaagatcactagaagctctagttcatcaggagatgcaagactt-aaagcttcaaaggttgttcaatg 9718003  T
Q  202 aatttaatctcgtctaagcattg 224  Q
     |||||||||||||||| |||||    
T  9718002 gatttaatctcgtctaaacattg 9717980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 23284920 - 23284700
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||||| || ||| ||||||||| |  ||||| | ||||  |||| | |||||||||    
T  23284920 acaaaagagaactatggaatcaacaaaaaggaagcttgaaacatctgaagagaagtgctcctgaagtc--aagtgcttctgaagtgatgatgtcatcaga 23284823  T
Q  119 agcaagttcatcagaagcatctcatc-----------------agaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatg 201  Q
    ||||||||||| ||||||||||||||                 |||||||  ||||||||||||||| |||||||| ||||||||||| | |||||||||    
T  23284822 agcaagttcattagaagcatctcatcagaagcagaagatcgctagaagctgaagttcatcaggagatgcaagactt-aaagcttcaaatgttgttcaatg 23284724  T
Q  202 aatttaatctcgtctaagcattgc 225  Q
     |||||||||||||||||||||||    
T  23284723 gatttaatctcgtctaagcattgc 23284700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 21625455 - 21625236
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||| ||  ||||||||||| ||||||||||||||||||||| || ||  || ||||||||||||||| ||||||  |||| ||| |||||||    
T  21625455 acaaaagagagaaaatgaatcaacaaataggaagcttgaagcatctgaagagaagcgcttctgaagacaaaagtgctcctgaagtgatgacg-catcaga 21625357  T
Q  119 agcaagttcatcagaagcatctcatcagaagct---------------ttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaa 203  Q
     |||||||||||| |||||||||||||||||||               ||   |||||||||||| |||||||| | ||||||||||| ||||||||| |    
T  21625356 ggcaagttcatcataagcatctcatcagaagctgaagatcaccagaagttgtctcatcaggagatgcaagactt-acagcttcaaaggttgttcaatgga 21625258  T
Q  204 tttaatctcgtctaagcattgc 225  Q
    ||||||||||||||||||||||    
T  21625257 tttaatctcgtctaagcattgc 21625236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 24117185 - 24117064
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | |||||||||||||||||||||| ||||||||||| || ||| ||||||||| | |||||| ||||||  |||| |||||||||||    
T  24117185 acaaaagagagctaaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcctgaagtc-aaagtgctcctgaagtgatgacgtcatcaga 24117087  T
Q  119 agcaagttcatcagaagcatctc 141  Q
    | |||||||||||||||||||||    
T  24117086 aacaagttcatcagaagcatctc 24117064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 224
Target Start/End: Original strand, 14100265 - 14100452
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | || ||| |||||||||   | |||| | ||||  |||| |||||||        
T  14100265 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctggagagaagtactcctgaagt--atagtgcttctgaagtgatgacgtcat---- 14100358  T
Q  119 agcaagttcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
               ||||||||||||||||||||||  ||||||||||||||| |||||||| |||| |||||||| ||||||||| |||||||||| |||||    
T  14100359 -----------cagaagcatctcatcagaagctgaagttcatcaggagatgcaagactt-aaagtttcaaaggatgttcaatggatttaatctcatctaa 14100446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 29918269 - 29918153
Alignment:
Q  108 acgtcatcagaagcaagttcatcagaagcatct-catcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaattt 206  Q
    ||||||| |||||||||| |||||||||||  | ||||||||||| |||||||||||||||| |||||||| ||||||||||||| ||||| ||| ||||    
T  29918269 acgtcattagaagcaagtccatcagaagcaagttcatcagaagctgtagttcatcaggagatgcaagactt-aaagcttcaaaggttgttc-atggattt 29918172  T
Q  207 aatctcgtctaagcattgc 225  Q
    |||||||||||||||||||    
T  29918171 aatctcgtctaagcattgc 29918153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 20112506 - 20112713
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||| |||| || ||||||||||||||||||||||||||||||||| || || ||| ||||| ||| |  ||||| || |||  |||| |||||||||||    
T  20112506 acaagagagggctatggaatcaacaaaaaggaagcttgaagcatctaaagagaagtgctcctaaagtc--aagtgttcatgaagtgatgacgtcatcaga 20112603  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagctt-caaaggctgttcaatgaatttaatctcgt 214  Q
    ||||||||| ||||||||   |  ||| | ||||||  ||||||||| ||||| |||||||| |||||||  ||||| ||||||||| |||||||||| |    
T  20112604 agcaagttcttcagaagctaaagatcacctgaagctgaagttcatcaagagatgcaagactt-aaagcttaaaaaggttgttcaatggatttaatctctt 20112702  T
Q  215 ctaagcattgc 225  Q
    |||||||||||    
T  20112703 ctaagcattgc 20112713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 110 - 225
Target Start/End: Complemental strand, 32544518 - 32544401
Alignment:
Q  110 gtcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaattt 206  Q
    ||||||||| |||||||||||||||||   |  ||| || ||||| |||||||||||||||| ||||||||||| |||||||||| ||||||||| ||||    
T  32544518 gtcatcagatgcaagttcatcagaagctgaaaatcaccataagctctagttcatcaggagatgcaagacttaaa-gcttcaaaggttgttcaatggattt 32544420  T
Q  207 aatctcgtctaagcattgc 225  Q
    |||||||||||||||||||    
T  32544419 aatctcgtctaagcattgc 32544401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 21235454 - 21235249
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||| ||||||||| |||||| ||||||||||||||| |||| |||||| |  | | |||||||||||||| ||| ||||||  |    |||||||||||    
T  21235454 acaatagagagcaaaggaatctacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaa-gtgctcctgaagtagcgacgtcatcaga 21235356  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||||||||||||||||   |  |||  |||||||  ||||||||||||||| ||| |    ||||||| ||||| ||||||||| |||||||||||||    
T  21235355 agcaagttcatcagaagctgaaaatcactagaagctgcagttcatcaggagatgcaacat---aaagctttaaaggttgttcaatggatttaatctcgtc 21235259  T
Q  216 taagcattgc 225  Q
    ||||||||||    
T  21235258 taagcattgc 21235249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 116 - 225
Target Start/End: Original strand, 26972130 - 26972241
Alignment:
Q  116 agaagcaagttcatcagaagcatc---tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctc 212  Q
    ||||||||||||||||||||||     ||| |||||||| || ||||||||||||| ||||||||||| |||||||| | ||||||||| ||||||||||    
T  26972130 agaagcaagttcatcagaagcagaaaatcaccagaagctctatttcatcaggagatgcaagacttaaa-gcttcaaatgttgttcaatggatttaatctc 26972228  T
Q  213 gtctaagcattgc 225  Q
    |||||||||||||    
T  26972229 gtctaagcattgc 26972241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 225
Target Start/End: Complemental strand, 13602460 - 13602308
Alignment:
Q  89 aagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatca-----------------gaagctttagttcatcaggagataca 171  Q
    ||||| ||||||  |||| ||||||||||||||||||||||||||||||||||||||                 |||||| |||||||||||||||| ||    
T  13602460 aagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcatctcatcaaaagccgaagatcacaagaagctatagttcatcaggagatgca 13602361  T
Q  172 agacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||| |||||||||| ||||||||| ||||||||| |||||||||||||    
T  13602360 agacttaaa-gcttcaaaggttgttcaatggatttaatcttgtctaagcattgc 13602308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 16264958 - 16265163
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||| ||||||||| |||||||||||||||||| | | ||||||||||| |  | | ||||||||||| |||||| ||||||  ||   |||||||||||    
T  16264958 acaatagagagcaaaggaatcaacaaaaaggaatcctaaagcatctgaagaaaactgctcctgaagac-aaagtgctcctgaagtggcgacgtcatcaga 16265056  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||||||||||||||||   |  ||| ||||||||  ||||| ||| ||||| ||| |    ||||||| ||||| ||||||||| |||||||||| ||    
T  16265057 agcaagttcatcagaagctgaaaatcaccagaagctgcagttcgtcaagagatgcaaca---taaagcttgaaaggttgttcaatggatttaatctcatc 16265153  T
Q  216 taagcattgc 225  Q
    ||||||||||    
T  16265154 taagcattgc 16265163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 19086507 - 19086284
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagaca----------------aaagtgatcctgagc 102  Q
    |||||||||||| | ||||||||||||||||||||||||||| |||||| || ||| ||||||||| ||                |||||| ||||||      
T  19086507 acaaaagagagctaaggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcctgaagtcaaagtgctcctgaagtcaaagtgctcctgaag 19086408  T
Q  103 tgataacgtcatcagaagcaagttcatcaga--agcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctg-ttcaa 199  Q
    |||| ||||||||||||||||||||||||||   | |  ||| ||||||||  ||||||||||||||| |||||||| ||||| |||| ||||| |||||    
T  19086407 tgatgacgtcatcagaagcaagttcatcagagctgaagatcaccagaagctgaagttcatcaggagatgcaagactt-aaagc-tcaagggctgattcaa 19086310  T
Q  200 tgaatttaatctcgtctaagcattgc 225  Q
    || ||||||||||||||||| |||||    
T  19086309 tggatttaatctcgtctaagtattgc 19086284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 20730512 - 20730717
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||| ||||||||| | |||||||||||||||||||| |||| |||||| |  | | ||| |||||||||| ||| ||||||  |  | |||||||||||    
T  20730512 acaatagagagcaaagaaatcaacaaaaaggaagctttaagcgtctgaagaaaactgctcatgaagacaaa-gtgctcctgaagtagtgacgtcatcaga 20730610  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||||||||||| ||||   |  |||  |||||||  |||||||||||||||  || |   |||||||||||||||||||||| | |||||||||| ||    
T  20730611 agcaagttcatcataagctgaaaatcactagaagctgcagttcatcaggagatgtaaca---aaaagcttcaaaggctgttcaagggatttaatctcatc 20730707  T
Q  216 taagcattgc 225  Q
    |||| |||||    
T  20730708 taagtattgc 20730717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 22802482 - 22802277
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||| |||||| || |||||||||||||||||||||| || | ||||||    | | |||||||||||||| ||| ||||||  |  | ||||||| |||    
T  22802482 acaatagagaggaaaggaatcaacaaaaaggaagcttaaaacgtctgaaataaactgctcctgaagacaaa-gtgctcctgaagtagtgacgtcattaga 22802384  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||||||||||||||||   |  ||| |||||| | |||||||||||||||| ||| |    ||||||||||||| ||||||||| ||||||| | |||    
T  22802383 agcaagttcatcagaagctgaaaatcaccagaagttgtagttcatcaggagatgcaaca---taaagcttcaaaggttgttcaatggatttaatattgtc 22802287  T
Q  216 taagcattgc 225  Q
    ||||||||||    
T  22802286 taagcattgc 22802277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 25597695 - 25597616
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattg 224  Q
    |||||| | ||||||||||||| || ||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||    
T  25597695 cagaagttgtagttcatcaggacatgcaagacttaaa-gcttcaaaggatgttcaatggatttaatctcgtctaagcattg 25597616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 10640229 - 10640353
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||| |||| |  ||   | |||||| |||  ||| ||||||  |||| |||||||||||    
T  10640229 acaaatgagagcaatgaaatcaacaagaaggaagcttgaagcatatgaagaaaagaggttctgaagtcaa--gtgctcctgaagtgatgacgtcatcaga 10640326  T
Q  119 agcaagttcatcagaagcatctcatca 145  Q
    ||||||||||||||||||| |||||||    
T  10640327 agcaagttcatcagaagcacctcatca 10640353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 15302526 - 15302422
Alignment:
Q  21 aaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagac-aaaagtgatcctgagctgataacgtcatcagaa 119  Q
    |||||||||||| ||||||||||||| |||| ||| | || |||||| || ||| ||||||||||| ||||||| ||||||  |||| ||||||||||||    
T  15302526 aaaagagagcaaaggaatcaacaaaatggaaacttaaggcgtctgaagagaagtgctcctgaagacaaaaagtgctcctgaagtgatgacgtcatcagaa 15302427  T
Q  120 gcaag 124  Q
    |||||    
T  15302426 gcaag 15302422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 13435738 - 13435668
Alignment:
Q  154 agttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||||||||| ||||||||||| |||||||||| | ||||||| |||||||||||| ||||||||||    
T  13435738 agttcatcaggagatgcaagacttaaa-gcttcaaaggattttcaatggatttaatctcgtttaagcattgc 13435668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 25597817 - 25597754
Alignment:
Q  21 aaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| || ||| |||||||||    
T  25597817 aaaagagagcaatggaatcaacaaaaaggaagctaaaagcatctgaagagaagtgctcctgaag 25597754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 15987465 - 15987370
Alignment:
Q  129 tcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||| |||||||||||||  |  ||||||| ||||   ||||||| | |||||||||| ||||||||| |||||||||||||||||||||||    
T  15987465 tcagaagcacctcatcagaagctacaactcatcagaagatgagagacttaga-gcttcaaaggatgttcaatggatttaatctcgtctaagcattgc 15987370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 15987551 - 15987503
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  15987551 acaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaa 15987503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 219
Target Start/End: Complemental strand, 18435803 - 18435698
Alignment:
Q  116 agaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctc 212  Q
    |||||||||||||||||||||   |  |||  ||||||| |||||||||||||||| |||||||| |||||||  |||| | ||||||| ||||||||||    
T  18435803 agaagcaagttcatcagaagctgaagatcactagaagctctagttcatcaggagatgcaagactt-aaagctttgaaggttattcaatggatttaatctc 18435705  T
Q  213 gtctaag 219  Q
    |||||||    
T  18435704 gtctaag 18435698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 19470941 - 19470894
Alignment:
Q  103 tgataacgtcatcagaagcaagttcatcagaagcatctcatcagaagc 150  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||    
T  19470941 tgatgacgtcatcagaagcaagttcatcagaagcacctcatcagaagc 19470894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 18435931 - 18435861
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaa 89  Q
    |||| |||||| || |||||||||||||||||||||| ||||||||||| || | | ||||||||||||||    
T  18435931 acaatagagagaaaaggaatcaacaaaaaggaagcttaaagcatctgaagagaactgctcctgaagacaaa 18435861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 32544625 - 32544555
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaa 89  Q
    |||| ||||||||| |||||||||||||||||||||| |||| |||||| || | | ||||||||||||||    
T  32544625 acaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaactgctcctgaagacaaa 32544555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 168
Target Start/End: Original strand, 19065892 - 19065986
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagat 168  Q
    |||||||||||||| ||| | ||||  |||| |||||||||||||||||||||||||||||   || ||| ||||||||  |||||||||||||||    
T  19065892 ctcctgaagacaaa-gtgcttctgaagtgatgacgtcatcagaagcaagttcatcagaagctgtatatcaccagaagctgcagttcatcaggagat 19065986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 19688984 - 19688903
Alignment:
Q  140 tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattg 224  Q
    ||||||||||||  ||||||||||||||| |  |||||||| |||||||||| ||||||||| ||||| ||||||| ||||||||    
T  19688984 tcatcagaagctgaagttcatcaggagatgc--gacttaaa-gcttcaaaggttgttcaatggatttattctcgtccaagcattg 19688903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 15302403 - 15302336
Alignment:
Q  157 tcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||| ||||||| ||||||||||| || ||||||| ||||||||| |||||||||||||||| ||||||    
T  15302403 tcattaggagatgcaagacttaaa-gcgtcaaaggttgttcaatggatttaatctcgtctaaacattgc 15302336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 24117035 - 24116964
Alignment:
Q  154 agttcatcaggagatacaagacttaaaagcttcaaa-ggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||||| |||| ||||||||||| |||||||| |||||||||||| ||| ||||||||| |||||||||    
T  24117035 agttcatcagaagatgcaagacttaaa-gcttcaaaaggctgttcaatggattcaatctcgtccaagcattgc 24116964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 136
Target Start/End: Complemental strand, 15955038 - 15954928
Alignment:
Q  26 agagcaatggaatcaacaaaaagg-aagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaag 124  Q
    ||||||| |||||||||||||||| |||||| |||| |||||| |  | | ||||| |||||||| ||| ||||||  || | |||||||||||||||||    
T  15955038 agagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaaaaaaactgctccttaagacaaa-gtgctcctgaagtggtgacgtcatcagaagcaag 15954940  T
Q  125 ttcatcagaagc 136  Q
    || |||||||||    
T  15954939 tttatcagaagc 15954928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 17608214 - 17608282
Alignment:
Q  103 tgataacgtcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagat 168  Q
    |||| |||||||||||||||||||||||||||||   || ||| |||||||| ||||||||||| ||||    
T  17608214 tgatgacgtcatcagaagcaagttcatcagaagctgtatatcaccagaagctatagttcatcagaagat 17608282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 26943851 - 26943789
Alignment:
Q  88 aaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatcagaagc 150  Q
    |||||| ||||||  |||| |||||||||||||||||||| ||||||||| ||||| ||||||    
T  26943851 aaagtgctcctgaagtgatgacgtcatcagaagcaagttcgtcagaagcacctcattagaagc 26943789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 19689073 - 19689008
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    ||||||||||||||  |||||||||||||||||| ||||||| |||||| ||  || |||||||||    
T  19689073 acaaaagagagcaaatgaatcaacaaaaaggaagtttgaagcgtctgaagagatgtgctcctgaag 19689008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 33351754 - 33351853
Alignment:
Q  37 atcaacaaaaagg-aagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaag 135  Q
    ||||||||||||| |||||| |||| |||||| |  | | |||||||||||||| ||| || |||  |||| | ||||||||||||||||||||||||||    
T  33351754 atcaacaaaaagggaagcttaaagcgtctgaagaaaactgctcctgaagacaaa-gtgctcttgaagtgatgatgtcatcagaagcaagttcatcagaag 33351852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 19832867 - 19832924
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaa 134  Q
    |||||||||||||| ||| ||||||  |||| ||||||||||||||||| |||||||||    
T  19832867 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaagcaaggtcatcagaa 19832924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 23298297 - 23298259
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttga 57  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  23298297 acaaatgagagcaatggaatctacaaaaaggaagcttga 23298259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 17381713 - 17381653
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||||||||||| ||| ||||||  || | |||||||||||||||||||||||| |||||    
T  17381713 ctcctgaagacaaa-gtgctcctgaagtggtgacgtcatcagaagcaagttcatcaaaagca 17381653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 18378610 - 18378545
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    ||||||||||| || |||||||||||||||||||||| || | ||| || || ||| |||||||||    
T  18378610 acaaaagagagtaaaggaatcaacaaaaaggaagcttaaaacgtcttaagagaagtgctcctgaag 18378545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 137
Target Start/End: Complemental strand, 21618512 - 21618483
Alignment:
Q  108 acgtcatcagaagcaagttcatcagaagca 137  Q
    ||||||||||||||||||||||||||||||    
T  21618512 acgtcatcagaagcaagttcatcagaagca 21618483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 25592875 - 25592838
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttg 56  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  25592875 acaaatgagagcaatggaatctacaaaaaggaagcttg 25592838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 137
Target Start/End: Complemental strand, 26589876 - 26589847
Alignment:
Q  108 acgtcatcagaagcaagttcatcagaagca 137  Q
    ||||||||||||||||||||||||||||||    
T  26589876 acgtcatcagaagcaagttcatcagaagca 26589847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 139233 - 139292
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| ||||||  |||| || |||||||||||||||| |||||||||    
T  139233 ctcctgaagacaaa-gtgctcctgaaatgatgacatcatcagaagcaagtttatcagaagc 139292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 147254 - 147313
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| ||||||  |||| || |||||||||||||||| |||||||||    
T  147254 ctcctgaagacaaa-gtgctcctgaaatgatgacatcatcagaagcaagtttatcagaagc 147313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 3680833 - 3680785
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    |||||||||||||| | |||| |||| |||||||||| |||||||||||    
T  3680833 acaaaagagagcaaagaaatctacaagaaggaagcttaaagcatctgaa 3680785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 12423505 - 12423446
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| || |||  |||| ||||||||||||||||||| |||||||||    
T  12423505 ctcctgaagacaaa-gtgctcttgaagtgatgacgtcatcagaagcaagtttatcagaagc 12423446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 13602512 - 13602476
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagctt 55  Q
    ||||||||||| || ||||||||||||||||||||||    
T  13602512 acaaaagagagaaaaggaatcaacaaaaaggaagctt 13602476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 136
Target Start/End: Complemental strand, 16877466 - 16877438
Alignment:
Q  108 acgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||||||||||||||||||    
T  16877466 acgtcatcagaagcaagttcatcagaagc 16877438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 26943902 - 26943854
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||| ||||||||||| |||||||| ||||  ||||||||||||||||    
T  26943902 acaaatgagagcaatgggatcaacaagaaggttgcttgaagcatctgaa 26943854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 102; Significance: 8e-51; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 39768 - 39563
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||||||| | |||||| || |||  | |||||| |||||||    
T  39768 acaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtc-aaagtgctcttgaagtcataacgacatcaga 39670  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||||||||||||||||   |  ||| |||||||| |||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||    
T  39669 agcaagttcatcagaagctgaagatcaccagaagctctagttcatcaggagatgcaaga-tttaaagcttcaaaggctgttcaatggatttaatctcgtc 39571  T
Q  216 taagcatt 223  Q
    || |||||    
T  39570 taggcatt 39563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 137828 - 137623
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||||||| | |||||| || |||  | |||||| |||||||    
T  137828 acaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtc-aaagtgctcttgaagtcataacgacatcaga 137730  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||||||||||||||||   |  ||| |||||||| |||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||    
T  137729 agcaagttcatcagaagctgaagatcaccagaagctctagttcatcaggagatgcaaga-tttaaagcttcaaaggctgttcaatggatttaatctcgtc 137631  T
Q  216 taagcatt 223  Q
    || |||||    
T  137630 taggcatt 137623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 159424 - 159296
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||| |||||||||||||||||||| || |||||||||||||||||||  | ||| ||| ||| |   |  ||| ||||||  |||| |||||||||||    
T  159424 acaaatgagagcaatggaatcaacaagaaagaagcttgaagcatctgaag-gaagtgctcatgatgttta--gtgctcctgaagtgatgacgtcatcaga 159328  T
Q  119 agcaagttcatcagaagcatctcatcagaagc 150  Q
    ||||||||||||||||||| ||||||||||||    
T  159327 agcaagttcatcagaagcacctcatcagaagc 159296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 1e-49; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 34 - 225
Target Start/End: Original strand, 28140399 - 28140589
Alignment:
Q  34 ggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcaga 133  Q
    ||||||||||||||||||||||  | | |||||| || ||| ||||||||| |||||||| ||||||  |||| ||||||||| ||||||||||||||||    
T  28140399 ggaatcaacaaaaaggaagcttagaacgtctgaagagaagtgctcctgaagtcaaaagtgctcctgaagtgatgacgtcatcaaaagcaagttcatcaga 28140498  T
Q  134 agcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||||||||||||  |||||||| |||||| |||||||||||| ||||||||| ||||||||| ||| ||||||||| |||||||||    
T  28140499 agcatctcatcagaagctgaagttcatcgggagatgcaagacttaaaa-cttcaaaggttgttcaatggattcaatctcgtccaagcattgc 28140589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 23235358 - 23235137
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||||||| |||||||||||||| |||||| |||| |||||| || ||| ||| ||||| |||| ||| ||||||  |||| |||||||||||    
T  23235358 acaaaagagagcaattgaatcaacaaaaagtaagcttaaagcgtctgaagagaagtgctcttgaagtcaaa-gtgctcctgaagtgatgacgtcatcaga 23235260  T
Q  119 agcaagttcatcagaagcatctcatcaga-----------------agctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatg 201  Q
    |||||||||||||||||||||||||||||                 |||| |||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  23235259 agcaagttcatcagaagcatctcatcagaagctgaaaatcaccagaagctctagttcatcatgagatgcaagactt-aaagcttcaaaggctgttcaatg 23235161  T
Q  202 aatttaatctcgtctaagcattgc 225  Q
     |||||||||||||||||||||||    
T  23235160 gatttaatctcgtctaagcattgc 23235137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 30667340 - 30667119
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||| || ||| |||| |||| |||| ||| ||||||  |||| |||||||||||    
T  30667340 acaatagagagcaattgaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcccgaagtcaaa-gtgctcctgaagtgatgacgtcatcaga 30667242  T
Q  119 agcaagttcatcagaagcatctcatcagaagc-----------------tttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatg 201  Q
    ||||||||| ||||||||||||||||||||||                 | |||||||||||||||| ||||| || ||||||||||||| |||||||||    
T  30667241 agcaagttcgtcagaagcatctcatcagaagctgaagaatatcagaagttgtagttcatcaggagatgcaagaatt-aaagcttcaaaggttgttcaatg 30667143  T
Q  202 aatttaatctcgtctaagcattgc 225  Q
     |||||||||||||||||||||||    
T  30667142 gatttaatctcgtctaagcattgc 30667119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 9015120 - 9015340
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| || ||| ||| |||||  ||||||||||||||  |||| |||||||||||    
T  9015120 acaaaagagagcaaaggaatcaacaaaatggaagcttgaagcatctgaagagaagtgctcttgaagt-aaaagtgatcctgaagtgatgacgtcatcaga 9015218  T
Q  119 agcaagttcatcagaagcatctcatcagaag----------------ctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatga 202  Q
    |||||||||||||||| || |||||||||||                ||  ||||||||||||||| |||||||| ||||||||||||| |||||||||     
T  9015219 agcaagttcatcagaaacaactcatcagaagcagaagatcccagaaactaaagttcatcaggagatgcaagactt-aaagcttcaaaggttgttcaatgg 9015317  T
Q  203 atttaatctcgtctaagcattgc 225  Q
    ||||||||| |||||||||||||    
T  9015318 atttaatcttgtctaagcattgc 9015340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 25829455 - 25829264
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||| |||| |||||| || ||| |||||||||||||||||| ||||||  |||| |||||||||||    
T  25829455 acaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatgacgtcatcaga 25829356  T
Q  119 agcaagttcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    ||||||               ||| ||||||||  ||||||||||||||| |||||||| | ||||||||||| ||||||||| ||||||||||||||||    
T  25829355 agcaag--------------atcaccagaagctaaagttcatcaggagatgcaagactt-agagcttcaaaggatgttcaatggatttaatctcgtctaa 25829271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 20568498 - 20568720
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||| || |||||||||||||||||||||| |  | |||||| |  ||| |||||||||||||||||| || |||| |||| |||||||  ||    
T  20568498 acaaaagagagtaaaggaatcaacaaaaaggaagcttaagacgtctgaagataagtgctcctgaagacaaaagtgctcatgaggtgatgacgtcatttga 20568597  T
Q  119 agcaagttcatcagaagcatctcat-----------------cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatg 201  Q
    |||||||||||||||||||||||||                 |||||||| |||||||||||||||| |||||||| ||||||| ||||||||||| |||    
T  20568598 agcaagttcatcagaagcatctcataagaagttcaagatcaccagaagctgtagttcatcaggagatgcaagactt-aaagctttaaaggctgttccatg 20568696  T
Q  202 aatttaatctcgtctaagcattgc 225  Q
     |||||||||||||||||||||||    
T  20568697 gatttaatctcgtctaagcattgc 20568720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 22260756 - 22260626
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| ||||||||||||||||||| || | || |||||| || ||| ||||||||||||||| || ||||||  |||| |||||||||||    
T  22260756 acaaaagagagcaaaggaatcaacaaaaaggaagtttaaggcgtctgaagagaagtgctcctgaagacaaaaatgctcctgaagtgatgacgtcatcaga 22260657  T
Q  119 agcaagttcatcagaagcatctcatcagaag 149  Q
    ||||||||||||| |||||||||||||||||    
T  22260656 agcaagttcatcaaaagcatctcatcagaag 22260626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 24850415 - 24850545
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||| |  ||| ||||||||| |  ||||| ||||||  | || ||||| |||||    
T  24850415 acaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagaaaagtgctcctgaagtc--aagtgctcctgaagtaatgacgtcgtcaga 24850512  T
Q  119 agcaagttcatcagaagcatctcatcagaagct 151  Q
    ||||||||||||||||||| |||||||||||||    
T  24850513 agcaagttcatcagaagcacctcatcagaagct 24850545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 40782806 - 40782690
Alignment:
Q  34 ggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcaga 133  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||    |||||| ||||||  |||| ||||||||||||||||||||| ||||    
T  40782806 ggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaaagtcaaagtgctcctgaagtgatgacgtcatcagaagcaagttcaccaga 40782707  T
Q  134 agcatctcatcagaagc 150  Q
    ||||| |||||||||||    
T  40782706 agcatttcatcagaagc 40782690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 225
Target Start/End: Original strand, 39037412 - 39037612
Alignment:
Q  25 gagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaag 124  Q
    |||||| |||||||||||||||||||||||||||||||||||| || ||| || ||||||    ||||| | ||||  |||| |||||||||||||||||    
T  39037412 gagagctatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctactgaag--ttaagtgcttctgaagtgatgacgtcatcagaagcaag 39037509  T
Q  125 ttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagca 221  Q
    ||||||||||||   |  ||| | |||| |  |||| ||||| ||||   |||||||||| ||||||||| |||||| || |||| ||||||||||||||    
T  39037510 ttcatcagaagctgaagatcaccggaagttaaagttgatcagaagatgagagacttaaaa-cttcaaaggttgttcattggatttgatctcgtctaagca 39037608  T
Q  222 ttgc 225  Q
    ||||    
T  39037609 ttgc 39037612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 19540749 - 19540546
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | ||||||||||||||| |||||| |||| |||||| |  |||  |||||||| | |  ||| ||||||  |||| |||||||||||    
T  19540749 acaaaagagagctaaggaatcaacaaaaagaaagcttaaagcgtctgaagaaaagtgttcctgaagtcta--gtgctcctgaagtgatgacgtcatcaga 19540652  T
Q  119 agcaagttcatcagaagcatc-tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtcta 217  Q
    ||||  | |||||||||||   ||| ||||||||  ||||||||| ||||| ||||||||||| |||||||| | ||||||||| |||||||||| ||||    
T  19540651 agcacct-catcagaagcaagatcaccagaagctgaagttcatcatgagatgcaagacttaaa-gcttcaaatgttgttcaatggatttaatctcatcta 19540554  T
Q  218 agcattgc 225  Q
    ||||||||    
T  19540553 agcattgc 19540546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 20151799 - 20152005
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||| ||||||||| | ||| |||||||||||||||| |||| |||||| |  | | ||||||||||| |||||| ||||||  |  | |||||||||||    
T  20151799 acaatagagagcaaagtaattaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagac-aaagtgctcctgaaatagtgacgtcatcaga 20151897  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    | ||||||||||||||||   |  ||| ||||||||  || |||||||||||| ||  || | ||||||||||| | ||||||||| |||||||||||||    
T  20151898 aacaagttcatcagaagctgaaaatcaccagaagctgcagctcatcaggagatgca--acattaaagcttcaaaagttgttcaatggatttaatctcgtc 20151995  T
Q  216 taagcattgc 225  Q
    ||||||||||    
T  20151996 taagcattgc 20152005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 22454747 - 22454870
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagt 125  Q
    ||||| ||| |||||||||||||||||||||||||||||||| |  ||| ||||||||| | |  ||| || |||  |||||||||| |||||||||||     
T  22454747 agagctatgaaatcaacaaaaaggaagcttgaagcatctgaagaaaagtgctcctgaagtcta--gtgctcttgaagtgataacgtcgtcagaagcaagc 22454844  T
Q  126 tcatcagaagcatctcatcagaagct 151  Q
    |||||||||||| |||||||||||||    
T  22454845 tcatcagaagcacctcatcagaagct 22454870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 22187920 - 22188072
Alignment:
Q  89 aagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatcagaagct---------------tt--agttcatcaggagataca 171  Q
    ||||| ||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||               ||  |||||||||||| || ||    
T  22187920 aagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcatctcatcagaagctgaagatcaccagaagttgaagttcatcaggacatgca 22188019  T
Q  172 agacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||| |||||    
T  22188020 agacttaaa-gcttcaaaggctgttcaatggatttaatctcgtctaagtattgc 22188072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 25037019 - 25037139
Alignment:
Q  21 aaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaag 120  Q
    |||||||||||| |||||||||||||| ||||||| ||||||||||| || ||| ||| ||||| ||||| || |||          |||||||||||||    
T  25037019 aaaagagagcaaaggaatcaacaaaaacgaagcttaaagcatctgaagagaagtgctcatgaagtcaaaa-tgctccc---------acgtcatcagaag 25037108  T
Q  121 caagttcatcagaagcatctcatcagaagct 151  Q
    |||||||||||||||||||||||||||||||    
T  25037109 caagttcatcagaagcatctcatcagaagct 25037139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 25041126 - 25041246
Alignment:
Q  21 aaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaag 120  Q
    |||||||||||| |||||||||||||| ||||||| ||||||||||| || ||| ||| ||||| ||||| || |||          |||||||||||||    
T  25041126 aaaagagagcaaaggaatcaacaaaaacgaagcttaaagcatctgaagagaagtgctcatgaagtcaaaa-tgctccc---------acgtcatcagaag 25041215  T
Q  121 caagttcatcagaagcatctcatcagaagct 151  Q
    |||||||||||||||||||||||||||||||    
T  25041216 caagttcatcagaagcatctcatcagaagct 25041246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 10009569 - 10009719
Alignment:
Q  89 aagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatcagaag---------------ctttagttcatcaggagatacaag 173  Q
    ||||| ||||||  |||| ||||||||||||||||||||||||||||||||||||||||||               ||  ||||||||||||||| ||||    
T  10009569 aagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcatctcatcagaagaaagatcaccagaagctgaagttcatcaggagatgcaag 10009668  T
Q  174 acttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||| ||||||| |||||||||||| ||| ||||||||| |||||||||    
T  10009669 acttaaa-gcttcaagggctgttcaatggattcaatctcgtccaagcattgc 10009719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 13963829 - 13963947
Alignment:
Q  108 acgtcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaat 204  Q
    |||||||||||||||||||| |||||||    |  |||  ||||||| ||||||||||| |||| ||||| ||||| |||||||||| ||||||||| ||    
T  13963829 acgtcatcagaagcaagttcctcagaagttaaagatcactagaagctctagttcatcagtagatgcaagatttaaa-gcttcaaaggttgttcaatggat 13963927  T
Q  205 ttaatctcgtctaagcattg 224  Q
    ||||||||||||||||||||    
T  13963928 ttaatctcgtctaagcattg 13963947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 38631305 - 38631224
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctga 100  Q
    |||||||||||||| | |||||||||||| ||||||||||||||||||| || ||| |||||||||||| ||||| ||||||    
T  38631305 acaaaagagagcaaagaaatcaacaaaaatgaagcttgaagcatctgaagagaagtgctcctgaagacagaagtgctcctga 38631224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 38781731 - 38781617
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| || ||  |||||||||                  |||| |||||||||||    
T  38781731 acaaaagagagcaattgaatcaacaaaaaggaagcttgaagcatctgaagagaagcgctcctgaag------------------tgatgacgtcatcaga 38781650  T
Q  119 agcaagttcatcagaagcatctcatcagaagct 151  Q
    |||||||||||||||||||||||||||||||||    
T  38781649 agcaagttcatcagaagcatctcatcagaagct 38781617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 24377421 - 24377356
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||| || ||| |||||||||    
T  24377421 acaaaagagagcaatagaatcaacaaaaaggaagctagaagcatctgaagagaagtgctcctgaag 24377356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 7609172 - 7609094
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcatt 223  Q
    ||||||||  ||||||||||||||| ||||||||||| ||||||| |||||||||||| ||| ||||||||| |||||||    
T  7609172 cagaagctaaagttcatcaggagatgcaagacttaaa-gcttcaagggctgttcaatggattcaatctcgtccaagcatt 7609094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 225
Target Start/End: Original strand, 18376752 - 18376876
Alignment:
Q  103 tgataacgtcatcagaagcaagttcatcagaagcatc---tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaa 199  Q
    |||| ||||||||||||| ||||||||||||||||     ||| |||||| |  |||||||  | ||||   ||||||||| ||||||||||||||||||    
T  18376752 tgatgacgtcatcagaagtaagttcatcagaagcagaagatcaccagaagttgaagttcatttgaagatgagagacttaaa-gcttcaaaggctgttcaa 18376850  T
Q  200 tgaatttaatctcgtctaagcattgc 225  Q
    || |||||||||||||||||||||||    
T  18376851 tggatttaatctcgtctaagcattgc 18376876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 21536998 - 21537126
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| ||| |||||||||||||||| ||| ||  ||||||| || ||| ||||||||| |   |||| ||||||  | || |||||||||||    
T  21536998 acaaaagagagctatgaaatcaacaaaaaggaaacttaaaatatctgaagagaagtgctcctgaagtc--tagtgctcctgaagtaatgacgtcatcaga 21537095  T
Q  119 agcaagttcatcagaagcatctcatcagaag 149  Q
    |||||| ||| |||||||| |||||||||||    
T  21537096 agcaagctcaccagaagcacctcatcagaag 21537126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 21537148 - 21537218
Alignment:
Q  154 agttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||||||| ||| ||||||    
T  21537148 agttcatcaggagatgcaagacttaaa-gcttcaaaggttgttcaatggatttaatctcgtttaaacattgc 21537218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 225
Target Start/End: Complemental strand, 22317840 - 22317724
Alignment:
Q  111 tcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaattta 207  Q
    |||||| |||||||| ||||||||||   |  ||| |||||||| || ||||||| ||||| ||||||||||| |||||||||||| |||| || |||||    
T  22317840 tcatcataagcaagtacatcagaagctgaaaatcaccagaagctctatttcatcaagagatgcaagacttaaa-gcttcaaaggcttttcattggattta 22317742  T
Q  208 atctcgtctaagcattgc 225  Q
    ||||| ||||||||||||    
T  22317741 atctcatctaagcattgc 22317724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 24576398 - 24576284
Alignment:
Q  21 aaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaag 120  Q
    ||||| |||||||||||||||||||||||||||||||| ||| |||| |  |||  || ||||| | |||||| | ||||  |||| |||||||||||||    
T  24576398 aaaagggagcaatggaatcaacaaaaaggaagcttgaaacatatgaagataagtgttcatgaagtc-aaagtgcttctgaagtgatgacgtcatcagaag 24576300  T
Q  121 caagttcatcagaagc 136  Q
    |||| |||||||||||    
T  24576299 caaggtcatcagaagc 24576284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 30621538 - 30621437
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||| |||||||||||||||||||||||||||||||| |||||||| || || ||| |||  |||| | |||||| ||||||  |||| |||||||||||    
T  30621538 acaatagagagcaatggaatcaacaaaaaggaagcttcaagcatctaaagagaagtgctctcgaagtc-aaagtgctcctgaagtgatgacgtcatcaga 30621440  T
Q  119 agc 121  Q
    |||    
T  30621439 agc 30621437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 30624159 - 30624058
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||| |||||||||||||||||||||||||||||||| |||||||| || || ||| |||  |||| | |||||| ||||||  |||| |||||||||||    
T  30624159 acaatagagagcaatggaatcaacaaaaaggaagcttcaagcatctaaagagaagtgctctcgaagtc-aaagtgctcctgaagtgatgacgtcatcaga 30624061  T
Q  119 agc 121  Q
    |||    
T  30624060 agc 30624058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 22187868 - 22187933
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    |||||| ||||||| ||||||| |||||||||||||||||||||||||| || ||| |||||||||    
T  22187868 acaaaatagagcaaaggaatcagcaaaaaggaagcttgaagcatctgaagagaagtgctcctgaag 22187933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 18376686 - 18376734
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  18376686 acaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaa 18376734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 22260603 - 22260536
Alignment:
Q  157 tcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||||||| ||||||||||| || ||||| | ||||||||| |||||||||||||||||||||||    
T  22260603 tcatcaggagatgcaagacttaaa-gcgtcaaaagttgttcaatggatttaatctcgtctaagcattgc 22260536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 25037158 - 25037229
Alignment:
Q  153 tagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||||| ||| ||||| ||| |||||||||    
T  25037158 tagttcatcaggagatgcaagacttaaa-gcttcaaaggttgttcaatggattcaatcttgtcgaagcattgc 25037229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 25041265 - 25041336
Alignment:
Q  153 tagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||||| ||| ||||| ||| |||||||||    
T  25041265 tagttcatcaggagatgcaagacttaaa-gcttcaaaggttgttcaatggattcaatcttgtcgaagcattgc 25041336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 10009532 - 10009582
Alignment:
Q  34 ggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  10009532 ggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaag 10009582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 23184103 - 23184161
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    ||||| |||||||||||||||||||||||||||||||||||| |  ||| |||||||||    
T  23184103 agagctatggaatcaacaaaaaggaagcttgaagcatctgaagaaaagtgctcctgaag 23184161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 23595360 - 23595418
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    ||||| |||||||||||||||||||||||||||||||||||| |  ||| |||||||||    
T  23595360 agagctatggaatcaacaaaaaggaagcttgaagcatctgaagaaaagtgctcctgaag 23595418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 196
Target Start/End: Complemental strand, 44840699 - 44840582
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc-atctcatcagaagctttagttcatcaggagatacaaga 174  Q
    |||||||||||||| ||| ||||||  |||| ||||||||||||||||| ||||||||||| |  ||||||||||||  ||||||||| ||||| ||  |    
T  44840699 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaagcaagatcatcagaagcaaattcatcagaagctgcagttcatcaagagatgca--a 44840603  T
Q  175 cttaaaagcttcaaaggctgtt 196  Q
    ||| ||||||||||| ||||||    
T  44840602 ctt-aaagcttcaaaagctgtt 44840582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 13963759 - 13963824
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    |||||||||||||| ||||||||||||||||| | ||||| |||||||| || ||| |||||||||    
T  13963759 acaaaagagagcaaaggaatcaacaaaaaggacgtttgaaacatctgaaaagaagtgctcctgaag 13963824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 33074519 - 33074459
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||||||||||| ||| ||||||  |||| ||||||||||||||||||||||||||||||    
T  33074519 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagca 33074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 22272480 - 22272351
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||| |||||||||||||||||||| ||||||| |||||||| ||||| |  ||   | |||||| ||||  |  ||||||  |||| ||||||| |||    
T  22272480 acaaatgagagcaatggaatcaacaagaaggaaggttgaagcaactgaagaaaagagtttctgaagtcaaa--tactcctgaagtgatgacgtcattaga 22272383  T
Q  119 agcaagttcatcagaagcatctcatcagaagc 150  Q
    | |||||||||||||| || ||||||||||||    
T  22272382 aacaagttcatcagaaacacctcatcagaagc 22272351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 24850569 - 24850636
Alignment:
Q  158 catcaggagatacaagacttaaaagcttcaaa-ggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||||| ||||||||||| |||||||| || ||||||||| ||||||||||||||| |||||||    
T  24850569 catcaggagatgcaagacttaaa-gcttcaaaaggttgttcaatggatttaatctcgtctacgcattgc 24850636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 30621417 - 30621346
Alignment:
Q  153 tagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||| ||||||||||| ||||| ||||| | |||||||| ||||||||| |||||||||||| ||||||||||    
T  30621417 tagtgcatcaggagatgcaagaattaaagg-ttcaaaggttgttcaatggatttaatctcgtgtaagcattgc 30621346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 30624038 - 30623967
Alignment:
Q  153 tagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||| ||||||||||| ||||| ||||| | |||||||| ||||||||| |||||||||||| ||||||||||    
T  30624038 tagtgcatcaggagatgcaagaattaaagg-ttcaaaggttgttcaatggatttaatctcgtgtaagcattgc 30623967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 44881499 - 44881451
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||||    
T  44881499 acaaatgagagcaatgaaatcaacaagaaggaagcttgaagcatctgaa 44881451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 150
Target Start/End: Complemental strand, 7609216 - 7609181
Alignment:
Q  115 cagaagcaagttcatcagaagcatctcatcagaagc 150  Q
    ||||||||||||||||||||||||||||||||||||    
T  7609216 cagaagcaagttcatcagaagcatctcatcagaagc 7609181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 136
Target Start/End: Original strand, 28711468 - 28711578
Alignment:
Q  26 agagcaatggaatcaacaaaaa-ggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaag 124  Q
    ||||||| |||||||||||||| |||||||| |||| | |||| |  | | |||||||||||||| ||| ||||||  || | |||||||||||||||||    
T  28711468 agagcaaaggaatcaacaaaaaaggaagcttaaagcgtttgaagaaaactgctcctgaagacaaa-gtgctcctgaagtggtgacgtcatcagaagcaag 28711566  T
Q  125 ttcatcagaagc 136  Q
    || |||||||||    
T  28711567 tttatcagaagc 28711578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 218
Target Start/End: Original strand, 6573895 - 6574085
Alignment:
Q  27 gagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagtt 126  Q
    |||||| ||||| |||||||||||||||| || |||||||| |  | | || ||||||||||| ||| |||| |  |  | |||||||||||||||||||    
T  6573895 gagcaaaggaattaacaaaaaggaagcttaaaacatctgaagaaaaatgcttctgaagacaaa-gtgctcctaaagtagtgacgtcatcagaagcaagtt 6573993  T
Q  127 catcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    ||||||||||   |  |||  ||||| |  |||||||||| |||| ||| |    ||||||||||||| ||||||||  ||||||||||||||||    
T  6573994 catcagaagctgaaaatcactagaagttgcagttcatcagaagatgcaaca---taaagcttcaaaggttgttcaattgatttaatctcgtctaa 6574085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 22317963 - 22317893
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaa 89  Q
    |||| ||||||||| |||||||||||||||||||||| |||| |||||| || | | ||||||||| ||||    
T  22317963 acaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaactgctcctgaagtcaaa 22317893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 24576246 - 24576165
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaattt-aatctcgtctaagcattgc 225  Q
    ||||||||  ||||||| ||||||| ||| ||||||| |||||||||| ||||||||| |||| |||||| ||||||||||||    
T  24576246 cagaagctaaagttcattaggagatgcaatacttaaa-gcttcaaaggttgttcaatggatttaaatctcatctaagcattgc 24576165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 25189696 - 25189638
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    ||||| |||||||| ||||||||||||||||||||||||||| |  ||| |||||||||    
T  25189696 agagctatggaatcgacaaaaaggaagcttgaagcatctgaacaaaagtgctcctgaag 25189638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 18703116 - 18703075
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||||||||||||||||| ||||||||||||||| ||||||    
T  18703116 agagcaatggaatcaacaagaaggaagcttgaagcgtctgaa 18703075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 6392913 - 6392854
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| ||||||  |||| ||||||||||||||||||| |||||||||    
T  6392913 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaagcaagtttatcagaagc 6392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 19115475 - 19115427
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||| |||||||||||||||||||  ||||||||||||||| ||||||    
T  19115475 acaaatgagagcaatggaatcaacaggaaggaagcttgaagcgtctgaa 19115427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 22776137 - 22776196
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| ||||||  |||| ||||||| |||||||||||||||||||||    
T  22776137 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcattagaagcaagttcatcagaagc 22776196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 22781515 - 22781574
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| ||||||  |||| ||||||| |||||||||||||||||||||    
T  22781515 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcattagaagcaagttcatcagaagc 22781574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 26618856 - 26618896
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaag 59  Q
    ||||| |||||||||||||||||||| ||||||||||||||    
T  26618856 acaaatgagagcaatggaatcaacaagaaggaagcttgaag 26618896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 28550750 - 28550809
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| ||||||  |||| ||||||||| |||||||||||||||||||    
T  28550750 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcataagcaagttcatcagaagc 28550809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 30557111 - 30557170
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| ||||||  |||| |||||||||||||||||||||||| ||||    
T  30557111 ctcctgaagacaaa-gtgctcctgaattgatgacgtcatcagaagcaagttcatcaaaagc 30557170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 40332356 - 40332297
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| ||||||  |||| ||||||||| |||||||||||||||||||    
T  40332356 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcataagcaagttcatcagaagc 40332297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 41121503 - 41121551
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||| || ||||||||||| ||||| ||||||||||||||||||||||    
T  41121503 acaaatgaaagcaatggaataaacaagaaggaagcttgaagcatctgaa 41121551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 22802750 - 22802693
Alignment:
Q  77 tcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaag 135  Q
    ||||||||||||| ||| ||||||  |||| ||||||||||||||||| ||||||||||    
T  22802750 tcctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaagcaaggtcatcagaag 22802693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 38631230 - 38631184
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagca 122  Q
    |||||||||||||||||| ||||||  |||| |||||||||||||||    
T  38631230 ctcctgaagacaaaagtgctcctgaagtgatgacgtcatcagaagca 38631184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 31800709 - 31800769
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||||||||||| ||| ||||||  ||||  |||||||||||||||||| ||||||||||    
T  31800709 ctcctgaagacaaa-gtgctcctgaagtgatggcgtcatcagaagcaagtttatcagaagca 31800769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 20569810 - 20569774
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagctt 55  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  20569810 acaaatgagagcaatggaatctacaaaaaggaagctt 20569774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 24576295 - 24576255
Alignment:
Q  110 gtcatcagaagcaagttcatcagaagcatctcatcagaagc 150  Q
    |||||||||||| |||||||||||||||| |||||| ||||    
T  24576295 gtcatcagaagctagttcatcagaagcatatcatcataagc 24576255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 24779518 - 24779474
Alignment:
Q  180 aagcttcaaaggctgttcaatgaatttaatctcgtctaagcattg 224  Q
    |||||||||||| ||||||||| ||| ||||||||| ||||||||    
T  24779518 aagcttcaaaggttgttcaatggattcaatctcgtccaagcattg 24779474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 38781583 - 38781536
Alignment:
Q  170 caagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    ||||||||||| |||||||||| ||||||||  ||||||||||||||||    
T  38781583 caagacttaaa-gcttcaaaggttgttcaattgatttaatctcgtctaa 38781536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 8e-48; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 2913426 - 2913627
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||| |||||| |||| || ||| |||||||||||||||||| ||||||  | || ||||||||| |    
T  2913426 acaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatatgaagagaagtgctcctgaagacaaaagtgctcctgaagtaatgacgtcatcaaa 2913525  T
Q  119 agcaagttcatcagaa---gcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||||||||||||||   | |  ||| ||||| || |||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||| ||    
T  2913526 agcaagttcatcagaagatgaagatcaccagaaactgtagttcatcaggagatgcaagactt-aaatcttcaaaggctgttcaatgaatttaatctcatc 2913624  T
Q  216 taa 218  Q
    |||    
T  2913625 taa 2913627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 2500378 - 2500170
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||| || |||  |||| ||||||||| |    
T  2500378 acaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagacaaaagtgctcatgaagtgatgacgtcatcata 2500279  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||||||||||||||||      ||| |||||||| | |||  ||||||||| |||||||| ||||||||||| | ||||||||| |||||||||||||    
T  2500278 agcaagttcatcagaagctgaggatcaccagaagctcttgtttttcaggagatgcaagactt-aaagcttcaaatgttgttcaatggatttaatctcgtc 2500180  T
Q  216 taagcattgc 225  Q
    ||||||||||    
T  2500179 taagcattgc 2500170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 222
Target Start/End: Complemental strand, 30026244 - 30026040
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| || ||| || ||||||  ||||||| ||||||  |||| |||||||||||    
T  30026244 acaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgcttctgaag-taaaagtgctcctgaagtgatgacgtcatcaga 30026146  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||||||||||||||||   |  ||| |||||||| |||||||||| ||||| |||||||| ||||||||||| |||| |||||| ||||| ||||||     
T  30026145 agcaagttcatcagaagctgaagatcaccagaagctctagttcatcaagagatgcaagactt-aaagcttcaaacgctggtcaatggatttagtctcgta 30026047  T
Q  216 taagcat 222  Q
    |||||||    
T  30026046 taagcat 30026040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 44467403 - 44467196
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||| || ||| |||||||||   | |||| ||||||  |||| ||| |||||||    
T  44467403 acaaaatagagcaatggaatcaacaaaaaggaagtttgaagcatctgaagagaagtgctcctgaag--tatagtgctcctgaagtgatgacgccatcaga 44467306  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttc-aaaggctgttcaatgaatttaatctcgt 214  Q
    ||||||||||||||||||   |  ||| || |||||  ||||||||||||||| |||||||| |||||||| ||||| ||||||||| ||||||||||||    
T  44467305 agcaagttcatcagaagctgaagatcaccaaaagctgaagttcatcaggagatgcaagactt-aaagcttcaaaaggttgttcaatggatttaatctcgt 44467207  T
Q  215 ctaagcattgc 225  Q
    |||||||||||    
T  44467206 ctaagcattgc 44467196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 33691531 - 33691738
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||| ||||||||| ||||||||||||||||||| || |||| |||||| || | | |||||||||||||| ||| ||||||  || | |||| ||||||    
T  33691531 acaatagagagcaaaggaatcaacaaaaaggaagtttaaagcgtctgaagagaactgctcctgaagacaaa-gtgctcctgaagtggtgacgttatcaga 33691629  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||||||||| |||||    |  ||| |||||||| |||||||||||||||| |||||| |||| ||||||||||||||| |||| |||||||||||||    
T  33691630 agcaagttcattagaagttgaaaatcaccagaagctctagttcatcaggagatgcaagacataaa-gcttcaaaggctgttaaatggatttaatctcgtc 33691728  T
Q  216 taagcattgc 225  Q
    ||||||||||    
T  33691729 taagcattgc 33691738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 11319758 - 11319627
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||||| |||||||||||||||||||| |||| |||||| || ||| ||||||||| | |||||| ||||||  |||| ||||||| | |    
T  11319758 acaaaagagagcaatgaaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaag-ccaaagtgctcctgaagtgatgacgtcattaaa 11319660  T
Q  119 agcaagttcatcagaagcatctcatcagaagct 151  Q
    |||||||||||||||||||||||||||||||||    
T  11319659 agcaagttcatcagaagcatctcatcagaagct 11319627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 13880457 - 13880326
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||| |||| |||||| || ||| || |||||| |||| ||| ||||||  |||| || ||||||||    
T  13880457 acaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgcttctgaagtcaaa-gtgctcctgaagtgatgacatcatcaga 13880359  T
Q  119 agcaagttcatcagaagcatctcatcagaagct 151  Q
    |||||||||||||||||||||||||||||||||    
T  13880358 agcaagttcatcagaagcatctcatcagaagct 13880326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 15088842 - 15088652
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| || ||| |||||||||                  |||| |||||||||||    
T  15088842 acaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaag------------------tgatgacgtcatcaga 15088761  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||||||||||| ||||   |  ||| |||||||| || ||||||||||||| |||||| |||| |||||||||||||||||||| |||||||||||||    
T  15088760 agcaagttcatcataagctgaagatcaccagaagctctaattcatcaggagatgcaagacgtaaa-gcttcaaaggctgttcaatggatttaatctcgtc 15088662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 13692694 - 13692563
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||  ||||||||||||| | || |||||| || ||| |||||||||||||||||| ||||||  |||| || ||||||||    
T  13692694 acaaaagagagcaaaggaatcaggaaaaaggaagcttaaggcgtctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatgacatcatcaga 13692595  T
Q  119 agcaagttcatcagaagcatctcatcagaagc 150  Q
    ||||||||||||||||||||||| ||||||||    
T  13692594 agcaagttcatcagaagcatctcttcagaagc 13692563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 4494736 - 4494638
Alignment:
Q  126 tcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||||||||| |||||||||||  ||||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||    
T  4494736 tcatcagaagcatcgcatcagaagctgaagttcatcaggagatgcaagacttaaa-gcttcaaaggttgttcaatggatttaatctcgtctaagcattgc 4494638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 150
Target Start/End: Complemental strand, 14193412 - 14193297
Alignment:
Q  35 gaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaa 134  Q
    ||||||||||||| |||||||||||| |||||| || ||  |||||||||||||||||| ||||||  |||| |||||||||||||||||||||||| ||    
T  14193412 gaatcaacaaaaatgaagcttgaagcgtctgaagagaagcgctcctgaagacaaaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcataa 14193313  T
Q  135 gcatctcatcagaagc 150  Q
    |||||| |||||||||    
T  14193312 gcatcttatcagaagc 14193297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 21 - 225
Target Start/End: Original strand, 12366557 - 12366774
Alignment:
Q  21 aaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaag 120  Q
    |||||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||||   ||| ||| ||||||  |||| || |||||||||     
T  12366557 aaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctaaagagaagtgctcctgaatttaaa-gtgctcctgaagtgatgacatcatcagaat 12366655  T
Q  121 caagttcatcagaagcatctcatcagaagc---------------tttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatt 205  Q
    ||||||||||| ||||||||||||||||||               |  ||||||||||||| | ||| ||||||| ||||||| |||||||||||| |||    
T  12366656 caagttcatcaaaagcatctcatcagaagcaaggtcaccagaagctgaagttcatcaggaggtgcaaaacttaaa-gcttcaagggctgttcaatggatt 12366754  T
Q  206 taatctcgtctaagcattgc 225  Q
    ||||||||| ||||||||||    
T  12366755 taatctcgtttaagcattgc 12366774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 13730566 - 13730701
Alignment:
Q  89 aagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaa 188  Q
    ||||| ||||||  |||| ||||||||| || ||||||||| ||||||||||||||| |||||  || ||| |||||||| |||| |||||| |||||||    
T  13730566 aagtgctcctgaagtgatgacgtcatcataaacaagttcattagaagcatctcatcataagctaaagctcaccaggagatgcaaggcttaaa-gcttcaa 13730664  T
Q  189 aggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||| ||||||||| |||||||||||||||||||||||    
T  13730665 aggttgttcaatggatttaatctcgtctaagcattgc 13730701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 223
Target Start/End: Original strand, 10882978 - 10883197
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||| ||||||| |||| |||||| || ||| || |||||| |||| ||| ||||||  |||  ||||| |||||    
T  10882978 acaaaagagagcaaaggaatcaacaaaaatgaagcttaaagcgtctgaagagaagtgctactgaagtcaaa-gtgctcctgaagtgacgacgtcgtcaga 10883076  T
Q  119 agcaagttcatcagaagcatc-----------------tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatg 201  Q
    |||||||||||||||||||||                 ||| |||||||| |||||||||||||||| |||||||| |||| |||||||| |||||||||    
T  10883077 agcaagttcatcagaagcatcccatcagaagctgaagatcaccagaagctgtagttcatcaggagatgcaagactt-aaagtttcaaaggttgttcaatg 10883175  T
Q  202 aatttaatctcgtctaagcatt 223  Q
     |||||||||||||||| ||||    
T  10883176 gatttaatctcgtctaatcatt 10883197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 13649052 - 13648935
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| ||||||||||||||||||| || | || |||||| || ||| |||||||||||||||||| ||||||  |||| |||||||||||    
T  13649052 acaaaagagagcaaaggaatcaacaaaaaggaagtttaaggcgtctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatgacgtcatcaga 13648953  T
Q  119 agcaagttcatcagaagc 136  Q
    |||||| ||| |||||||    
T  13648952 agcaagatcaacagaagc 13648935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 13260429 - 13260648
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||  | ||||| |||| |||||||||||||||||| | || || ||| ||| ||||| |||||||| ||||||  |||| | |||||||||    
T  13260429 acaaaagagagataaggaattaacataaaggaagcttgaagcatttaaagagaagtgctcatgaagtcaaaagtgctcctgaagtgatgatgtcatcaga 13260528  T
Q  119 agcaagttcatcagaagcatctcat---------------cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaa 203  Q
    ||||||||||||| |||||||||||               ||||||||  ||||||||||||||| |||||||| |||||| ||||| ||||| |||| |    
T  13260529 agcaagttcatcataagcatctcattagaagcaagatcaccagaagctaaagttcatcaggagatgcaagactt-aaagctccaaagactgtt-aatgga 13260626  T
Q  204 tttaatctcgtctaagcattgc 225  Q
    |||||||||||| |||||||||    
T  13260627 tttaatctcgtccaagcattgc 13260648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 225
Target Start/End: Complemental strand, 21695657 - 21695533
Alignment:
Q  103 tgataacgtcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaa 199  Q
    |||| ||||||||| |||||||||||||||||||   |  ||| ||||||||  ||||||||| ||||| ||||||||||| |||||||| | |||||||    
T  21695657 tgatgacgtcatcataagcaagttcatcagaagctgaagatcaccagaagctgaagttcatcaagagatgcaagacttaaa-gcttcaaaagttgttcaa 21695559  T
Q  200 tgaatttaatctcgtctaagcattgc 225  Q
    || |||||||||||||||||||||||    
T  21695558 tggatttaatctcgtctaagcattgc 21695533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 28409387 - 28409261
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||||||  ||||| |||||||||||| ||||||| |||||| || ||| ||  ||||     ||||| ||||||  |||| |||||||||||    
T  28409387 acaaaagagagcaaatgaatcgacaaaaaggaagtttgaagcgtctgaagagaagtgctattgaa-----aagtgctcctgaagtgatgacgtcatcaga 28409293  T
Q  119 agcaagttcatcagaagcatctcatcagaagc 150  Q
    ||||||||||||||||||||||||||||||||    
T  28409292 agcaagttcatcagaagcatctcatcagaagc 28409261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 48800446 - 48800516
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaa 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||| ||||    
T  48800446 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtcaaa 48800516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 13137729 - 13137921
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||  | |||||||||||||||||||||||||||||||||| || ||| ||||||||| |||| ||| ||||||  |||| ||||| ||| |    
T  13137729 acaaaagagaggtaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtcaaa-gtgctcctgaagtgatgacgtcttcaaa 13137827  T
Q  119 agcaagttcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    |||          ||||    ||| |||||||| |||||||| ||||||| ||||||||||| |||||||||| |  |||||| ||||||||||||||||    
T  13137828 agct---------gaaga---tcaccagaagctctagttcataaggagatgcaagacttaaa-gcttcaaaggttaatcaatggatttaatctcgtctaa 13137914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 225
Target Start/End: Original strand, 22577832 - 22578047
Alignment:
Q  25 gagagcaatggaatcaacaaaaaggaagcttgaag--catctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagca 122  Q
    ||||||||  |||||||||||||||||||||||||  |  | ||| || ||| |||||||||  ||||||| ||||||  |||| ||||||| |||||||    
T  22577832 gagagcaaatgaatcaacaaaaaggaagcttgaagtgctccagaagagaagtgctcctgaagt-aaaagtgctcctgaagtgatgacgtcattagaagca 22577930  T
Q  123 agttcatcagaagcatctcatcaga---------------agctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaattta 207  Q
    || ||||||||||||||||||||||               ||||  ||||||||||||||| ||||||||||| |||||||||| ||||||||  |||||    
T  22577931 aggtcatcagaagcatctcatcagaggcaagatcaccagaagctgaagttcatcaggagatgcaagacttaaa-gcttcaaagggtgttcaatagattta 22578029  T
Q  208 atctcgtctaagcattgc 225  Q
    ||||||| ||||||||||    
T  22578030 atctcgtttaagcattgc 22578047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 13880943 - 13880827
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||| |  |||  |  ||||| |  ||||| ||||||  |||| |||||||||||    
T  13880943 acaaatgagagcaatggaatcaacaagaaggaagcttgaagcatctgaagaaaagtggttatgaagtc--aagtgctcctgaagtgatgacgtcatcaga 13880846  T
Q  119 agcaagttcatcagaagca 137  Q
    |||||||||||||||||||    
T  13880845 agcaagttcatcagaagca 13880827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 21692517 - 21692419
Alignment:
Q  126 tcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||||||| ||||||||||||  ||||||| ||||||| |||||||| ||||||||||| | | |||||||| ||||||||| ||||||||||||    
T  21692517 tcatcagaagcatatcatcagaagctgaagttcattaggagatgcaagactt-aaagcttcaaaagttattcaatgattttaatctcttctaagcattgc 21692419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 14426860 - 14426752
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagt 125  Q
    ||||||| |||||||||||||||||||||| |||| |||||| |  | | ||||||||||| |||||| ||||||  || | ||||||||||||||||||    
T  14426860 agagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagac-aaagtgctcctgaagtggtgacgtcatcagaagcaagt 14426762  T
Q  126 tcatcagaag 135  Q
    ||||||||||    
T  14426761 tcatcagaag 14426752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 13303022 - 13302943
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattg 224  Q
    |||||||| |||||||| ||||||| ||||||||||| |||||||||| ||||||||| ||||||| ||||||||||||||    
T  13303022 cagaagctgtagttcattaggagatgcaagacttaaa-gcttcaaaggttgttcaatggatttaatatcgtctaagcattg 13302943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 21283329 - 21283399
Alignment:
Q  154 agttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||||||| || ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||    
T  21283329 agttcatcaggatatgcaagacttaaa-gcttcaaaggttgttcaatggatttaatctcgtctaagcattgc 21283399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 48236811 - 48236928
Alignment:
Q  108 acgtcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaat 204  Q
    |||||||||||||||||||||||||||||   |  ||| ||||||||  ||||||||||||||| |||  |||||| |||||||| | ||||||||| ||    
T  48236811 acgtcatcagaagcaagttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaa--cttaaa-gcttcaaaagttgttcaatggat 48236907  T
Q  205 ttaatctcgtctaagcattgc 225  Q
    | |||||||||||||||||||    
T  48236908 tcaatctcgtctaagcattgc 48236928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 11793260 - 11793129
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtca-tcag 117  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||| || ||| |||||||||     |||| |||| |  |||| |||||| | |     
T  11793260 acaaaagagagcgaaggaatcaacaaaaaggaagcttgaagcatctgaaaagaagtgctcctgaag--tttagtgctcctaaagtgatgacgtcattaaa 11793163  T
Q  118 aagcaagttcatcagaagcatctcatcagaagct 151  Q
    |||||||||||||| || ||||||||||||||||    
T  11793162 aagcaagttcatcataaacatctcatcagaagct 11793129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 225
Target Start/End: Complemental strand, 9069808 - 9069694
Alignment:
Q  113 atcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaat 209  Q
    ||||||| ||||||||||||||||   |  ||| |||||||| || ||||||||||||| ||| ||||||| |||||||||| ||||||| | |||||||    
T  9069808 atcagaaacaagttcatcagaagctgaaaatcaccagaagctctatttcatcaggagatgcaaaacttaaa-gcttcaaaggttgttcaagggatttaat 9069710  T
Q  210 ctcgtctaagcattgc 225  Q
     |||||||||||||||    
T  9069709 atcgtctaagcattgc 9069694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 11793119 - 11793039
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||  ||||||||||||||| ||||||||||| |||| ||||| ||||||||| | |||||||||||||||||||||    
T  11793119 cagaagctgaagttcatcaggagatgcaagacttaaa-gctttaaaggttgttcaatggacttaatctcgtctaagcattgc 11793039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 15468128 - 15468056
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtcta 217  Q
    |||||||| |||||||||||||||| |||||||| ||||||||||||| ||||||||  |||||||||||||||    
T  15468128 cagaagctctagttcatcaggagatgcaagactt-aaagcttcaaagggtgttcaatagatttaatctcgtcta 15468056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 9098050 - 9098179
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||| |||||||||||||||||||| | |||||||||||||||||||| |  ||   | |||||| |  ||||| ||||||  |||| | |||||||||    
T  9098050 acaaatgagagcaatggaatcaacaagatggaagcttgaagcatctgaagaaaagaggttctgaagtc--aagtgctcctgaagtgatgatgtcatcaga 9098147  T
Q  119 agcaagttcatcagaagcatctcatcagaagc 150  Q
    ||||||||||| ||||||| ||||||| ||||    
T  9098148 agcaagttcattagaagcacctcatcaaaagc 9098179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 28622265 - 28622382
Alignment:
Q  108 acgtcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaat 204  Q
    |||||||||||||||||||||||| ||||   |  ||| ||||||||  ||||||||||||||| |||  |||||| |||||||| | ||||||||| ||    
T  28622265 acgtcatcagaagcaagttcatcataagctaaaaatcaccagaagctgcagttcatcaggagatgcaa--cttaaa-gcttcaaaagttgttcaatggat 28622361  T
Q  205 ttaatctcgtctaagcattgc 225  Q
    | |||||||||||||||||||    
T  28622362 tcaatctcgtctaagcattgc 28622382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 4494823 - 4494761
Alignment:
Q  22 aaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || || ||| |||||||||    
T  4494823 aaagagagcaatgaaatcaacaaaaaggaagcttgaagcatctaaagagaagtgctcctgaag 4494761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 16316433 - 16316583
Alignment:
Q  89 aagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatcagaagc---------------tttagttcatcaggagatacaag 173  Q
    ||||| ||||||  |||| | |||||||||||||||||||||||||||||||||||||||||               |  ||||||||||| ||| ||||    
T  16316433 aagtgctcctgaagtgatgatgtcatcagaagcaagttcatcagaagcatctcatcagaagcaagatcaccagaagttgaagttcatcaggggatgcaag 16316532  T
Q  174 acttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||| |||||||||| ||||||||| |||||||| |||||||| |||||    
T  16316533 acttaaa-gcttcaaaggttgttcaatggatttaatcacgtctaagaattgc 16316583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 29935183 - 29935370
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | |||||||||||||||||||||| || | ||| || || |||| || ||||| |||  ||| ||||||  |||| | |||||||||    
T  29935183 acaaaagagagctaaggaatcaacaaaaaggaagcttaaatcgtctcaagagaagttttc-tgaagtcaa--gtgctcctgaagtgatgatgtcatcaga 29935279  T
Q  119 agcaagttcatcagaagcatc-tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatc 210  Q
    ||||  | |||||||||||   ||| ||||||||  ||||||||||||||| ||||||||||||  |||||||| ||||||||  ||||||||    
T  29935280 agcatct-catcagaagcaagatcaccagaagctaaagttcatcaggagatgcaagacttaaaa-tttcaaaggttgttcaatatatttaatc 29935370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 30945194 - 30945310
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||| |||||||  || |||||||||||||||||| || | |||||| |  | | |||||||||||||| ||| ||||||  || | |||||||||||    
T  30945194 acaaaaaagagcaaatgagtcaacaaaaaggaagcttaaaacgtctgaagaaaactgctcctgaagacaaa-gtgctcctgaagtggtgacgtcatcaga 30945292  T
Q  119 agcaagttcatcagaagc 136  Q
    ||||||||||||||||||    
T  30945293 agcaagttcatcagaagc 30945310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 13880307 - 13880236
Alignment:
Q  153 tagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||||||||  | |||||| |||| |||||||||||||||||||| | |||||||||||||||||||||    
T  13880307 tagttcatcaggaattgcaagacataaa-gcttcaaaggctgttcaatggacttaatctcgtctaagcattgc 13880236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 23279905 - 23279983
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattg 224  Q
    |||||| | |||||||||||||||| |||||||| ||||||||||||||| ||| ||| ||||||||| ||||||||||||    
T  23279905 cagaagttgtagttcatcaggagatgcaagactt-aaagcttcaaaggctattc-atggatttaatcttgtctaagcattg 23279983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 24788445 - 24788381
Alignment:
Q  20 caaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    |||||||||||||  |||||||||||| |||||||||||||||||||| || ||| |||||||||    
T  24788445 caaaagagagcaaatgaatcaacaaaatggaagcttgaagcatctgaagagaagtgctcctgaag 24788381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 149
Target Start/End: Original strand, 5000675 - 5000789
Alignment:
Q  34 ggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcaga 133  Q
    ||||||||||||||||||| ||||| |||||||| || |||  |||||||| | |||||| ||||||  |||  | ||||||||||||||| |  |||||    
T  5000675 ggaatcaacaaaaaggaagtttgaaacatctgaagagaagtgatcctgaagtc-aaagtgctcctgaagtgacgatgtcatcagaagcaagattgtcaga 5000773  T
Q  134 agcatctcatcagaag 149  Q
    ||||||||| ||||||    
T  5000774 agcatctcaccagaag 5000789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 9709750 - 9709828
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||  ||||||||||||||| ||| |    |||||||||||| |||||||||| |||||||||||||||||||||||    
T  9709750 cagaagctgcagttcatcaggagatgcaacat---aaagcttcaaagcctgttcaatggatttaatctcgtctaagcattgc 9709828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 150
Target Start/End: Original strand, 19236831 - 19236947
Alignment:
Q  32 atggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatca 131  Q
    |||||||||||||||||||||| ||||||||||||| |  |||  |  ||||| |  ||||| | ||||  |||| |||||||||||||||||||| |||    
T  19236831 atggaatcaacaaaaaggaagcctgaagcatctgaagaatagtgattttgaagtc--aagtgcttctgaagtgatgacgtcatcagaagcaagttcgtca 19236928  T
Q  132 gaagcatctcatcagaagc 150  Q
    ||| || ||||||||||||    
T  19236929 gaaccacctcatcagaagc 19236947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 13303122 - 13303060
Alignment:
Q  89 aagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatcagaagct 151  Q
    ||||| ||||||  |||| ||||||| |||||||| |||||||||||||||||||||||||||    
T  13303122 aagtgctcctgaagtgatgacgtcattagaagcaacttcatcagaagcatctcatcagaagct 13303060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 225
Target Start/End: Original strand, 30944267 - 30944349
Alignment:
Q  140 tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||||||  ||||||||||||||| |||  |||||| |||||||||| ||||||| | ||||||||||||||||| |||||    
T  30944267 tcatcagaagctgcagttcatcaggagatgcaa--cttaaa-gcttcaaaggttgttcaacggatttaatctcgtctaagtattgc 30944349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 16316381 - 16316446
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    |||||||||||| | ||||||||||||||||||||||||||| ||| || || ||| |||||||||    
T  16316381 acaaaagagagctaaggaatcaacaaaaaggaagcttgaagcgtctaaagagaagtgctcctgaag 16316446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 24788353 - 24788273
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||  ||||||| ||||||| ||||||||||| |||||||||| ||||||||  ||||||| || ||||||||||||    
T  24788353 cagaagctgaagttcattaggagatgcaagacttaaa-gcttcaaaggttgttcaatagatttaatatcatctaagcattgc 24788273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 30945300 - 30945381
Alignment:
Q  140 tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattg 224  Q
    ||||||||||||  ||||||||||||||| |||  |||||| |||||||||| ||||||| | ||||||||||||||||| ||||    
T  30945300 tcatcagaagctgcagttcatcaggagatgcaa--cttaaa-gcttcaaaggttgttcaacggatttaatctcgtctaagtattg 30945381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 11319604 - 11319537
Alignment:
Q  157 tcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||| ||||| |||||||| || |||||||||| ||||||||| ||||||||| |||||||||||||    
T  11319604 tcatcaagagatgcaagacttcaa-gcttcaaaggatgttcaatggatttaatcttgtctaagcattgc 11319537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 13648928 - 13648861
Alignment:
Q  157 tcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||||||| | ||||||||| |||||||| | ||||||||| |||||||| ||||||||||||||    
T  13648928 tcatcaggagatgcgagacttaaa-gcttcaaaagatgttcaatggatttaatcgcgtctaagcattgc 13648861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 13692541 - 13692474
Alignment:
Q  157 tcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||| ||||  |||||||||| |||||||||| ||||||||| |||||||||||| ||||||||||    
T  13692541 tcatcagaagatgtaagacttaaa-gcttcaaaggttgttcaatggatttaatctcgtataagcattgc 13692474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 13890751 - 13890799
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||| || ||||||||||||||||| ||||||||||||||||||||||    
T  13890751 acaaatgaaagcaatggaatcaacaagaaggaagcttgaagcatctgaa 13890799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 28409241 - 28409171
Alignment:
Q  154 agttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||| ||||| |||||| |||  |||||||||| ||||||||| |||||||||||||||| ||||||    
T  28409241 agttcatcaagagatgcaagacataag-gcttcaaaggttgttcaatggatttaatctcgtctaaacattgc 28409171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 9709638 - 9709739
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||| |||||||||  ||||||||||||||||||||| |||| |||||| |  | | ||||||||||| |||||| ||||||  || | |||||||||||    
T  9709638 acaatagagagcaaatgaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagac-aaagtgctcctgaagtggtgacgtcatcaga 9709736  T
Q  119 agc 121  Q
    |||    
T  9709737 agc 9709739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 218
Target Start/End: Original strand, 7339762 - 7339893
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatcagaagctttagttcatcaggagatacaagac 175  Q
    |||||||||||||| ||| ||||||  || | |||||||||||||||||||||||||||||       ||||||||  ||||||||||||||| ||  ||    
T  7339762 ctcctgaagacaaa-gtgctcctgaagtggtgacgtcatcagaagcaagttcatcagaagc-------cagaagctgcagttcatcaggagatgca--ac 7339851  T
Q  176 ttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    || |||||||||||   |||| |||| |||||| |||||||||    
T  7339852 tt-aaagcttcaaaaattgtttaatggatttaaactcgtctaa 7339893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 13031894 - 13032020
Alignment:
Q  22 aaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagc 121  Q
    |||||||||||||||||||||||  | |||||||||||| |||||| |  ||| |||||||||     |||| |||||   | || ||||||||||||||    
T  13031894 aaagagagcaatggaatcaacaaggatgaagcttgaagcgtctgaagaaaagtgctcctgaag--tttagtgctcctggattaatgacgtcatcagaagc 13031991  T
Q  122 aagttcatcagaagcatctcatcagaagc 150  Q
    |||||||  |||| || ||||||||||||    
T  13031992 aagttcactagaaacacctcatcagaagc 13032020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 1293244 - 1293185
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| ||||||  |||| |||| ||||||||||||||||||||||||    
T  1293244 ctcctgaagacaaa-gtgctcctgaagtgatgacgttatcagaagcaagttcatcagaagc 1293185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 15468186 - 15468142
Alignment:
Q  103 tgataacgtcatcagaagcaagttcatcagaagcatctcatcaga 147  Q
    |||| |||||||||||||||||||||||| | |||||||||||||    
T  15468186 tgatgacgtcatcagaagcaagttcatcatatgcatctcatcaga 15468142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 21283270 - 21283310
Alignment:
Q  110 gtcatcagaagcaagttcatcagaagcatctcatcagaagc 150  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  21283270 gtcatcagaatcaagttcatcagaagaatctcatcagaagc 21283310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 41842125 - 41842177
Alignment:
Q  32 atggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    |||||||||||||||||||||||||| ||||||||| |  ||| |||||||||    
T  41842125 atggaatcaacaaaaaggaagcttgatgcatctgaagaaaagtgctcctgaag 41842177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 19237024 - 19237062
Alignment:
Q  179 aaagcttcaaaggctgttcaatgaatttaatctcgtcta 217  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  19237024 aaagcttcaaaggctgttcaaaggatttaatctcgtcta 19237062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 136
Target Start/End: Original strand, 30944168 - 30944277
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagt 125  Q
    |||||||  ||||||||||||||||||||| |||| | |||| |  | | ||||||||||| |||||| ||||||  || | | | ||||||||||| ||    
T  30944168 agagcaaatgaatcaacaaaaaggaagcttaaagcgtttgaagaaaactgctcctgaagac-aaagtgctcctgaagtggtgaagccatcagaagcacgt 30944266  T
Q  126 tcatcagaagc 136  Q
    |||||||||||    
T  30944267 tcatcagaagc 30944277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 4821768 - 4821708
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||||||||||| ||| ||||||  |||| ||||||||| ||||||| ||||||||||||    
T  4821768 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcaaaagcaaggtcatcagaagca 4821708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 8183213 - 8183164
Alignment:
Q  88 aaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||| ||||||  |||| |||||||||||||||||||||| |||||||    
T  8183213 aaagtgctcctgaagtgatgacgtcatcagaagcaagttcattagaagca 8183164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 13303174 - 13303109
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    |||||||||||||| | |||||||||||| |||| || |||| |||||| || ||| |||||||||    
T  13303174 acaaaagagagcaaagaaatcaacaaaaaagaagtttaaagcgtctgaagagaagtgctcctgaag 13303109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 13472568 - 13472605
Alignment:
Q  187 aaaggctgttcaatgaatttaatctcgtctaagcattg 224  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  13472568 aaaggttgttcaatggatttaatctcgtctaagcattg 13472605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 168
Target Start/End: Original strand, 19339137 - 19339231
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagat 168  Q
    |||||||||||||| ||| | ||||  |||| ||||| |||||||||||||||||||||||    | ||| ||||||||  |||||||||||||||    
T  19339137 ctcctgaagacaaa-gtgcttctgaagtgatgacgtcctcagaagcaagttcatcagaagctgtgtatcaccagaagctgcagttcatcaggagat 19339231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 35952483 - 35952524
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||||| |||||||||||||||||||||| |||| ||||||    
T  35952483 agagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaa 35952524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 39284467 - 39284500
Alignment:
Q  103 tgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||| |||||||||||||||||||||||||||||    
T  39284467 tgatgacgtcatcagaagcaagttcatcagaagc 39284500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 5826244 - 5826185
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| ||||||  | || | |||||||||||||||||||||||||||    
T  5826244 ctcctgaagacaaa-gtgctcctgaagtaatgaagtcatcagaagcaagttcatcagaagc 5826185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 13730515 - 13730547
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaa 51  Q
    |||||||||||||| ||||||||||||||||||    
T  13730515 acaaaagagagcaaaggaatcaacaaaaaggaa 13730547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 136
Target Start/End: Complemental strand, 27871959 - 27871931
Alignment:
Q  108 acgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||||||||||||||||||    
T  27871959 acgtcatcagaagcaagttcatcagaagc 27871931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 39284414 - 39284466
Alignment:
Q  32 atggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    ||||||||||||||||||||||||||||  |||||| |  ||| |||||||||    
T  39284414 atggaatcaacaaaaaggaagcttgaagtgtctgaagaaaagtactcctgaag 39284466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 48062704 - 48062752
Alignment:
Q  89 aagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    ||||| ||||||  |||| ||| ||||||||||||||||||||||||||    
T  48062704 aagtgctcctgaagtgatgacgccatcagaagcaagttcatcagaagca 48062752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 3e-47; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 26784694 - 26784486
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||| |||| |||||| || ||| |||||||||||||||||| || |||  | || |||||||||||    
T  26784694 acaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagacaaaagtgctcatgaagtcatgacgtcatcaga 26784595  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||||||||||||||||   |  ||| |||||||| ||||||| |||||||| ||||| || ||||||| ||||||||||||||| ||| |||||||||    
T  26784594 agcaagttcatcagaagctgaagatcaccagaagctgtagttcagcaggagatgcaaga-tttaaagctttaaaggctgttcaatggattcaatctcgtc 26784496  T
Q  216 taagcattgc 225  Q
     |||||||||    
T  26784495 caagcattgc 26784486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 17815320 - 17815100
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||| || |||||||||||||||||||||| || |||||||| || ||| |||||||||||||||||| ||||||  |||| ||||||||||     
T  17815320 acaaaagagagtaaaggaatcaacaaaaaggaagcttaaaacatctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatgacgtcatcagt 17815221  T
Q  119 agcaagttcatcagaagcatctcatcag---------------aagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaa 203  Q
    ||||||||||||||||||||||||||||               |||||  | ||||||| ||||| |||||||| ||||||||||||||||||||||| |    
T  17815220 agcaagttcatcagaagcatctcatcagaagcaagatcaccagaagctaaatttcatcaagagatgcaagactt-aaagcttcaaaggctgttcaatgga 17815122  T
Q  204 tttaatctcgtctaagcattgc 225  Q
    ||||||||||||||||||||||    
T  17815121 tttaatctcgtctaagcattgc 17815100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 20551215 - 20551026
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaa-ggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcag 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| |||||||||                  |||| ||||||||||    
T  20551215 acaaaagagagcaatggaatcaacaaaaaaggaagcttgaagcatctgaagagaagtgctcctgaag------------------tgatgacgtcatcag 20551134  T
Q  118 aagcaagttcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttc-aaaggctgttcaatgaatttaatctcgtct 216  Q
    ||||||| |||| |||||||||||||||||||||  ||||||||||||||| |||||||| |||||||| ||||| |||||||||  |||||||||||||    
T  20551133 aagcaagctcattagaagcatctcatcagaagctgaagttcatcaggagatgcaagactt-aaagcttcaaaaggttgttcaatggttttaatctcgtct 20551035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 34 - 225
Target Start/End: Original strand, 41566247 - 41566439
Alignment:
Q  34 ggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcaga 133  Q
    |||||||||||||| |||| || || | |||||| || | | |||||||||||||| ||| ||||||  ||||  |||||||||||||||||||||||||    
T  41566247 ggaatcaacaaaaatgaaggttaaaacgtctgaagagaactgctcctgaagacaaa-gtgttcctgaagtgatgtcgtcatcagaagcaagttcatcaga 41566345  T
Q  134 agc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||   |  |||||||||| | |||||||||||||||| ||||||||||| |||||||| ||| ||||||| |||||||||||||||||||||||    
T  41566346 agctgaagatcatcagaagttgtagttcatcaggagatgcaagacttaaa-gcttcaaaagctattcaatggatttaatctcgtctaagcattgc 41566439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 225
Target Start/End: Original strand, 23412792 - 23412979
Alignment:
Q  20 caaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaa 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||                  |||| ||||||||||||    
T  23412792 caaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaag------------------tgatgacgtcatcagaa 23412873  T
Q  120 gcaagttcatcagaagc-atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    ||||||||||||||||| |  ||| ||||||||  ||||||||||||||| |||||||| ||||||||||||| ||||||||| |||||||||| || ||    
T  23412874 gcaagttcatcagaagcaagatcaccagaagctgaagttcatcaggagatgcaagactt-aaagcttcaaaggttgttcaatggatttaatctcatccaa 23412972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 34 - 225
Target Start/End: Original strand, 19536101 - 19536305
Alignment:
Q  34 ggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcaga 133  Q
    ||||||||||||||| ||||||||||||||| || || |||||||||||| ||||| ||| ||||||  |||| ||||||||||||| ||||||||||||    
T  19536101 ggaatcaacaaaaagaaagcttgaagcatctaaagagaagttctcctgaacacaaa-gtgctcctgaagtgatgacgtcatcagaagtaagttcatcaga 19536199  T
Q  134 agcatctcatcagaagcttta---------------gttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    |||||||||||||||||   |               |||||||||||||| ||||||||||| ||||||| |||||||||||| ||| ||||||||| ||    
T  19536200 agcatctcatcagaagcaagatcgcaagaagcagaagttcatcaggagatgcaagacttaaa-gcttcaagggctgttcaatggattcaatctcgtccaa 19536298  T
Q  219 gcattgc 225  Q
    |||||||    
T  19536299 gcattgc 19536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 21910879 - 21910690
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||||||  ||||||||||||||||||||| |||| |||||| || ||| |||||||||||||||||| || |||  |||| |||||||||||    
T  21910879 acaaaagagagcaaatgaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagacaaaagtgctcatgaagtgatgacgtcatcaga 21910780  T
Q  119 agcaagttcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    ||||||               ||| ||||||||  ||||||||||||||| |||||||| ||||| |||||||||||| |||  ||||||||||||||||    
T  21910779 agcaag--------------atcaccagaagctaaagttcatcaggagatgcaagactt-aaagcgtcaaaggctgttgaattgatttaatctcgtctaa 21910695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 103 - 225
Target Start/End: Original strand, 6512314 - 6512436
Alignment:
Q  103 tgataacgtcatcagaagcaagttcatcagaagcatc-tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatg 201  Q
    |||| ||||||||||||||||||||||||||||||   |||  ||||| | |||||||||||||||| ||||||||||| |||||||||| |||||| ||    
T  6512314 tgatgacgtcatcagaagcaagttcatcagaagcaagatcactagaagttgtagttcatcaggagatgcaagacttaaa-gcttcaaaggttgttcagtg 6512412  T
Q  202 aatttaatctcgtctaagcattgc 225  Q
     |||||||||||||||||||||||    
T  6512413 gatttaatctcgtctaagcattgc 6512436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 225
Target Start/End: Complemental strand, 33022995 - 33022796
Alignment:
Q  25 gagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaag 124  Q
    |||||||| |||||||||||||||||||||| || | |||||| |  | | |||||||||||||| ||| |  |||  || | |||||||||||||||||    
T  33022995 gagagcaaaggaatcaacaaaaaggaagcttaaaacgtctgaaaaaaactgctcctgaagacaaa-gtgcttttgaagtggtgacgtcatcagaagcaag 33022897  T
Q  125 ttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagca 221  Q
    ||||||||||||   |  ||| |||||  |  ||||||||||||||| ||| |    ||||||||||||||||||||||| |||||||||| ||||||||    
T  33022896 ttcatcagaagctgaaaatcaccagaatttgcagttcatcaggagatgcaacat---aaagcttcaaaggctgttcaatggatttaatctcatctaagca 33022800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 21099497 - 21099620
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagt 125  Q
    ||||| ||||||||||||||||||| ||||||||| |||||| |  ||| ||| ||||| |||  ||| ||||||  |||| ||||||||||||||||||    
T  21099497 agagccatggaatcaacaaaaaggaggcttgaagcgtctgaagaaaagtgctcatgaagtcaa--gtgctcctgaagtgatgacgtcatcagaagcaagt 21099594  T
Q  126 tcatcagaagcatctcatcagaagct 151  Q
    |||||| ||||| |||||||||||||    
T  21099595 tcatcaaaagcacctcatcagaagct 21099620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 13545448 - 13545525
Alignment:
Q  147 aagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||| ||||||||| | |||||||||||||||||||||    
T  13545448 aagctctagttcatcaggagatgcaagacttaaa-gcttcaaaggttgttcaatggacttaatctcgtctaagcattgc 13545525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 89237 - 89427
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | ||||||||||||||||||||||||||  |||||| || ||| || |||||| | |||||| | ||||  |||| |||||||||||    
T  89237 acaaaagagagctaaggaatcaacaaaaaggaagcttgaagtgtctgaagagaagtgcttctgaagtc-aaagtgctactgaagtgatgacgtcatcaga 89335  T
Q  119 agcaagttcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    ||||||               ||| |||||| | |||||||||||||||| ||| |||| ||||||||||| | ||||||||| ||||||||||||||||    
T  89336 agcaag--------------atcaccagaagttgtagttcatcaggagatgcaaaactt-aaagcttcaaaagttgttcaatggatttaatctcgtctaa 89420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 642499 - 642615
Alignment:
Q  25 gagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaag 124  Q
    |||||| |||||||| |||||||||||||||||||| |||||| |  |||  |||||||| |||  ||| | ||||  |||| |||||||||||||||||    
T  642499 gagagctatggaatcgacaaaaaggaagcttgaagcgtctgaagaaaagtgatcctgaagtcaa--gtgcttctgaagtgatgacgtcatcagaagcaag 642596  T
Q  125 ttcatcagaagcatctcat 143  Q
    ||||||||||||| |||||    
T  642597 ttcatcagaagcacctcat 642615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 219
Target Start/End: Original strand, 9398551 - 9398744
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagt 125  Q
    ||||| ||||||||||||||||||||||||||||||| |||| || ||| || |||||| |  ||||| ||||||  |||| |||||||||  | |||||    
T  9398551 agagctatggaatcaacaaaaaggaagcttgaagcatttgaagagaagtgctgctgaagtc--aagtgctcctgaagtgatgacgtcatcaacatcaagt 9398648  T
Q  126 tcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaag 219  Q
    |||||||||||   |  ||| |||||| |  |||||||||| ||||   |||||| |||| |||||||| |||||| || |||| ||||||||||||    
T  9398649 tcatcagaagctcaagatcaccagaagttgaagttcatcagaagatgagagactt-aaaggttcaaaggttgttcattggatttgatctcgtctaag 9398744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 5430214 - 5430106
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagt 125  Q
    ||||||| |||||||||||||||||||||| |||| || ||| |  ||| ||||||||||| |||||| | ||||  || | ||||||||||||||||||    
T  5430214 agagcaaaggaatcaacaaaaaggaagcttaaagcgtccgaagaaaagtgctcctgaagac-aaagtgcttctgaagtggtgacgtcatcagaagcaagt 5430116  T
Q  126 tcatcagaag 135  Q
    ||||||||||    
T  5430115 tcatcagaag 5430106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 23881418 - 23881288
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||| ||||||||||||||||| || |||||||||||| |||||| |  ||| ||| ||||| | |   || ||||||  |||| || ||||||||    
T  23881418 acaaaagatagcaatggaatcaacaagaatgaagcttgaagcgtctgaagaaaagtgctcttgaagtctac--tgctcctgaagtgatgacatcatcaga 23881321  T
Q  119 agcaagttcatcagaagcatctcatcagaagct 151  Q
    |||||| |||||||||||| |||||||||||||    
T  23881320 agcaaggtcatcagaagcacctcatcagaagct 23881288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 12352625 - 12352684
Alignment:
Q  25 gagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    |||||| |||||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  12352625 gagagctatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaag 12352684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 225
Target Start/End: Complemental strand, 31118206 - 31118009
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagt 125  Q
    ||||||| |||||||||||||||||||||| |||| |||||| |  | | ||| ||||||| |||||| ||||||  || | ||||||||| ||||||||    
T  31118206 agagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaactactcatgaagac-aaagtgctcctgaagtggtgacgtcatcataagcaagt 31118108  T
Q  126 tcatcagaagc-atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttc-aaaggctgttcaatgaatttaatctcgtctaagcatt 223  Q
     ||  |||||| |  ||||||||||||  ||||||||||||||| ||| |    |||||||| ||||| |||| || | |||||| ||||||||||||||    
T  31118107 ccactagaagcaagttcatcagaagctgcagttcatcaggagatgcaaca---taaagcttcaaaaggttgtttaacggatttaaactcgtctaagcatt 31118011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 136
Target Start/End: Original strand, 14086344 - 14086453
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagt 125  Q
    ||||||| |||||||||||||||||||||| |||| | |||| |  | | ||||||||||| |||||| ||||||  |||| | ||||||||||||||||    
T  14086344 agagcaaaggaatcaacaaaaaggaagcttaaagcgtatgaagaaaactgctcctgaagac-aaagtgctcctgaagtgatgatgtcatcagaagcaagt 14086442  T
Q  126 tcatcagaagc 136  Q
    | |||| ||||    
T  14086443 ttatcaaaagc 14086453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 21072041 - 21072231
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||| ||||| | ||||||||||||||||||||||||||| |||||| || ||| ||| |||  |    |||| ||||||  |||| | |||||||||    
T  21072041 acaaaaaagagctaaggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcatga--aatttagtgctcctgaagtgatgaggtcatcaga 21072138  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatc 210  Q
    ||| |  |||||||||||   |  ||| ||||||||  ||||||||||||||| |||||||| ||||||| ||||| ||||| ||| ||||||||    
T  21072139 agc-atctcatcagaagctgaagatcaccagaagctgaagttcatcaggagatgcaagactt-aaagcttaaaaggttgttctatggatttaatc 21072231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 12352690 - 12352733
Alignment:
Q  108 acgtcatcagaagcaagttcatcagaagcatctcatcagaagct 151  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  12352690 acgtcatcaaaagcaagttcatcaaaagcatctcatcagaagct 12352733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 21198835 - 21198870
Alignment:
Q  32 atggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||||||||||||||||||||||||||||||||||    
T  21198835 atggaatcaacaaaaaggaagcttgaagcatctgaa 21198870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 4887360 - 4887243
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaagg-aagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcag 117  Q
    |||| ||||||||| |||||||||||||||| |||||| |||| |||||| |  | |  |||| |||| ||| ||| ||||||  |||| ||||||||||    
T  4887360 acaatagagagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaagaaaactgttcctaaagataaa-gtgctcctgaagtgatgacgtcatcag 4887262  T
Q  118 aagcaagttcatcagaagc 136  Q
    |||||||||||| ||||||    
T  4887261 aagcaagttcattagaagc 4887243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 6499567 - 6499525
Alignment:
Q  25 gagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    |||||| ||| ||||||||||||||||||||||||||||||||    
T  6499567 gagagctatgaaatcaacaaaaaggaagcttgaagcatctgaa 6499525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 25096661 - 25096723
Alignment:
Q  88 aaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatcagaagc 150  Q
    |||||| ||||||  |||| |||||||||||||||||||||||||||||| | | ||||||||    
T  25096661 aaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcaccccgtcagaagc 25096723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 25154631 - 25154693
Alignment:
Q  88 aaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatcagaagc 150  Q
    |||||| ||||||  |||| |||||||||||||||||||||||||||||| | | ||||||||    
T  25154631 aaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcaccccgtcagaagc 25154693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 196
Target Start/End: Original strand, 28464206 - 28464325
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaa 172  Q
    |||||||||||||| ||| ||||||  |||| ||||||||||||||||||| |||||||||      ||| ||||||||  ||||||||||||||||||     
T  28464206 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaagcaagtttatcagaagctgtgaatcaccagaagctgcagttcatcaggagataca- 28464303  T
Q  173 gacttaaaagcttcaaaggctgtt 196  Q
     |||| ||||||||||| ||||||    
T  28464304 -actt-aaagcttcaaaagctgtt 28464325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 7745447 - 7745508
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcct 80  Q
    ||||||||||||||  | |||||||||||||||||||||||| |||||| || ||| |||||    
T  7745447 acaaaagagagcaaatggatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcct 7745508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 26759459 - 26759399
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||||||||||| ||| |||||| ||||| ||||||||||| ||||| ||||||||||||    
T  26759459 ctcctgaagacaaa-gtgctcctgaactgatgacgtcatcagaggcaaggtcatcagaagca 26759399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 29138210 - 29138310
Alignment:
Q  37 atcaacaaaaa-ggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaag 135  Q
    ||||||||||| |||||||| |||| |||||| |  | |  ||||||||||||| ||| |||||   |||| ||||||||||||||||||||||||||||    
T  29138210 atcaacaaaaatggaagcttaaagcgtctgaagaaaactgttcctgaagacaaa-gtgctcctgtagtgatgacgtcatcagaagcaagttcatcagaag 29138308  T
Q  136 ca 137  Q
    ||    
T  29138309 ca 29138310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 7745569 - 7745609
Alignment:
Q  110 gtcatcagaagcaagttcatcagaagcatctcatcagaagc 150  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  7745569 gtcataagaagcaagttcatcaaaagcatctcatcagaagc 7745609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 25096611 - 25096659
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||| |||||||||| ||||||||| ||||||| ||||||||||||||    
T  25096611 acaaatgagagcaatgaaatcaacaagaaggaagtttgaagcatctgaa 25096659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 25154581 - 25154629
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||| |||||||||| ||||||||| ||||||| ||||||||||||||    
T  25154581 acaaatgagagcaatgaaatcaacaagaaggaagtttgaagcatctgaa 25154629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 135
Target Start/End: Complemental strand, 33933555 - 33933523
Alignment:
Q  103 tgataacgtcatcagaagcaagttcatcagaag 135  Q
    |||||||||||||||||||||||||||||||||    
T  33933555 tgataacgtcatcagaagcaagttcatcagaag 33933523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 7745619 - 7745697
Alignment:
Q  145 agaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattg 224  Q
    |||||||  ||| |||||||||||  |||||||||| |||||||||| ||||||||| |||||||| | || ||||||||    
T  7745619 agaagctgaagtacatcaggagatgtaagacttaaa-gcttcaaaggttgttcaatggatttaatcgcatccaagcattg 7745697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 21198893 - 21198995
Alignment:
Q  108 acgtcatcagaagcaagttcatcagaagc-atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaattt 206  Q
    ||||||||||||||||  ||||||||||| || ||| ||| ||||  |||||||||| ||||   |||||| ||||||||||||| ||||||| | ||||    
T  21198893 acgtcatcagaagcaaactcatcagaagcaatatcaccaggagctgaagttcatcagaagatgagagactt-aaagcttcaaaggttgttcaaaggattt 21198991  T
Q  207 aatc 210  Q
    ||||    
T  21198992 aatc 21198995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 32161037 - 32161002
Alignment:
Q  102 ctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    ||||| ||||||||||||||||||||||||||||||    
T  32161037 ctgatgacgtcatcagaagcaagttcatcagaagca 32161002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 23391471 - 23391531
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||||||||||| ||| | ||||  |||| |||||||||||||||||||||||| |||||    
T  23391471 ctcctgaagacaaa-gtgcttctgaagtgatgacgtcatcagaagcaagttcatcataagca 23391531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 23478727 - 23478678
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaag-gaagcttgaagcatctgaa 67  Q
    |||||||||||||| ||||||||||||||| ||||| | |||||||||||    
T  23478727 acaaaagagagcaaaggaatcaacaaaaagagaagcctaaagcatctgaa 23478678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 42243976 - 42243916
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    ||||||||||||||| || ||||||  |||| ||||||||||| ||||| ||||||||||||    
T  42243976 ctcctgaagacaaaa-tgctcctgaagtgatgacgtcatcagatgcaaggtcatcagaagca 42243916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 30115692 - 30115792
Alignment:
Q  37 atcaacaaaaagg-aagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaag 135  Q
    ||||||||||||| |||||| |||| |||||| |  | | |||||||||    ||||| ||||||  |||| ||||||| ||||||||||||||||||||    
T  30115692 atcaacaaaaagggaagcttaaagcgtctgaagaaaactgctcctgaagtttgaagtgctcctgaagtgatgacgtcattagaagcaagttcatcagaag 30115791  T
Q  136 c 136  Q
    |    
T  30115792 c 30115792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 22599905 - 22600127
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||| || ||  |||||||||||||||||| ||||||  |||| || ||||||||    
T  22599905 acaaaagagagcaaatgaatcaacaaaaaggaagcttgaagcatctgaagagaagcgctcctgaagacaaaagtgctcctgaagtgatgacatcatcaga 22600004  T
Q  119 agcaagttcatcagaagcatctcat-----------------cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatg 201  Q
    |||||||| ||||||||||||||||                 |||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||    
T  22600005 agcaagtttatcagaagcatctcatcagaagctaaagatcaccagaagctctagttcatcaggagatgcaagactt-aaagcttcaaaggctgttcaatg 22600103  T
Q  202 aatttaatctcgtctaagcattgc 225  Q
     ||||||||| |||||||||||||    
T  22600104 gatttaatcttgtctaagcattgc 22600127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 16235035 - 16235152
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||| ||||| ||||||  |||| |||||||||||    
T  16235035 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaaaagaagtgctcctgaagacacaagtgctcctgaagtgatgacgtcatcaga 16235134  T
Q  119 agcaagttcatcagaagc 136  Q
    || |||||||||||||||    
T  16235135 agtaagttcatcagaagc 16235152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 2268884 - 2268753
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||||||  |||||| ||||||||||| ||| |||||||||| || ||  |||||||||||||||||| ||||||  |||| |||||||||||    
T  2268884 acaaaagagagcaaatgaatcatcaaaaaggaagtttgtagcatctgaagagaagcgctcctgaagacaaaagtgctcctgaagtgatgacgtcatcaga 2268785  T
Q  119 agcaagttcatcagaagcatctcatcagaagc 150  Q
    ||||||||||||||||||||||||||||||||    
T  2268784 agcaagttcatcagaagcatctcatcagaagc 2268753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 23036273 - 23036384
Alignment:
Q  40 aacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatc 139  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||||| ||||| ||||||  |||| || ||||||||||||| |||||||||||||||    
T  23036273 aacaaaaaggaagcttgaagcatctgaatagaagcgctcctgaagacacaagtgctcctgaagtgatgacatcatcagaagcaatttcatcagaagcatc 23036372  T
Q  140 tcatcagaagct 151  Q
    ||||||||||||    
T  23036373 tcatcagaagct 23036384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 23 - 225
Target Start/End: Original strand, 33256080 - 33256296
Alignment:
Q  23 aagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagca 122  Q
    |||||||||| |||||||||||||| ||||||| | || | |||| || ||| ||| |||||||||||||| ||||||  |||| || | ||||||||||    
T  33256080 aagagagcaaaggaatcaacaaaaatgaagcttaaggcgtttgaagagaagtgctcttgaagacaaaagtgctcctgaagtgatgacattatcagaagca 33256179  T
Q  123 agttcatcagaagcatctcat---------------cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaattta 207  Q
    |||||||||||||||||||||               ||||||||  |||||| |||||||| |||||||| ||||||||||||| ||||||||| |||||    
T  33256180 agttcatcagaagcatctcatcagaagcaagatcaccagaagctaaagttcaacaggagatgcaagactt-aaagcttcaaaggttgttcaatggattta 33256278  T
Q  208 atctcgtctaagcattgc 225  Q
    ||||||||||||||||||    
T  33256279 atctcgtctaagcattgc 33256296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 23 - 225
Target Start/End: Original strand, 33276252 - 33276468
Alignment:
Q  23 aagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagca 122  Q
    |||||||||| |||||||||||||| ||||||| | || | |||| || ||| ||| |||||||||||||| ||||||  |||| || | ||||||||||    
T  33276252 aagagagcaaaggaatcaacaaaaatgaagcttaaggcgtttgaagagaagtgctcttgaagacaaaagtgctcctgaagtgatgacattatcagaagca 33276351  T
Q  123 agttcatcagaagcatctcat---------------cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaattta 207  Q
    |||||||||||||||||||||               ||||||||  |||||| |||||||| |||||||| ||||||||||||| ||||||||| |||||    
T  33276352 agttcatcagaagcatctcatcagaagcaagatcaccagaagctaaagttcaccaggagatgcaagactt-aaagcttcaaaggttgttcaatggattta 33276450  T
Q  208 atctcgtctaagcattgc 225  Q
    ||||||||||||||||||    
T  33276451 atctcgtctaagcattgc 33276468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 35402143 - 35402032
Alignment:
Q  40 aacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatc 139  Q
    ||||||||||||||||||||||| |||| || ||  |||||||||||| ||||| ||||||  |||| || |||||||||||||||||||||||||||||    
T  35402143 aacaaaaaggaagcttgaagcatatgaagagaagcgctcctgaagacacaagtgctcctgaagtgatgacctcatcagaagcaagttcatcagaagcatc 35402044  T
Q  140 tcatcagaagct 151  Q
    ||||||||||||    
T  35402043 tcatcagaagct 35402032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 10757760 - 10757556
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | ||||||||||||| ||||||||||||| | |||| || ||| ||| |||||   |  ||| |||| |  |||| ||||||||||     
T  10757760 acaaaagagagctaaggaatcaacaaaa-ggaagcttgaagcgtttgaagagaagtgctcttgaagttta--gtgctcctaaagtgatgacgtcatcagg 10757664  T
Q  119 agcaagttcatcagaagcatc-tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaa-ggctgttcaatgaatttaatctcgtct 216  Q
    |||||||||||||||||||   |||||| |||||  ||||||||||||||| ||||||||||| |||||||| || ||||||||| ||||||||||||||    
T  10757663 agcaagttcatcagaagcaagatcatcaaaagctgaagttcatcaggagatgcaagacttaaa-gcttcaaaaggttgttcaatggatttaatctcgtct 10757565  T
Q  217 aagcattgc 225  Q
    |||||||||    
T  10757564 aagcattgc 10757556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 218
Target Start/End: Complemental strand, 36134530 - 36134331
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| || ||  |||||||||||||||||| ||||||    || | |||||||||    
T  36134530 acaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagcgctcctgaagacaaaagtgctcctgaagcaatgatgtcatcaga 36134431  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||  | || |||||||   |  ||| |||||||| |   ||||||| ||||||||||||| |||| |||||||| ||||||||| |||||||||| ||    
T  36134430 agcatctccaccagaagctgaagatcaccagaagctgt--ctcatcagaagatacaagactt-aaagtttcaaaggttgttcaatggatttaatctcatc 36134334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 103 - 225
Target Start/End: Original strand, 28492225 - 28492349
Alignment:
Q  103 tgataacgtcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaa 199  Q
    |||| |||||||||||||||||||||||||||||   |  || ||||||| | |||||||||||||||| ||||||||||| |||||||||| |||||||    
T  28492225 tgatgacgtcatcagaagcaagttcatcagaagctgaagatcttcagaagttgtagttcatcaggagatgcaagacttaaa-gcttcaaaggttgttcaa 28492323  T
Q  200 tgaatttaatctcgtctaagcattgc 225  Q
    || ||||||| |||||||||||||||    
T  28492324 tggatttaatatcgtctaagcattgc 28492349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 225
Target Start/End: Original strand, 20954253 - 20954418
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatcagaagctt-----------------tagttc 158  Q
    |||||||||||||||||| ||||||  |||| |||||||||||  |||||||||||||||||||||||||||||||                  ||||||    
T  20954253 ctcctgaagacaaaagtgctcctgaagtgatgacgtcatcagattcaagttcatcagaagcatctcatcagaagctgaagatcaccagaagctctagttc 20954352  T
Q  159 atcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||    
T  20954353 atcaggagatgcaagacttaaa-gcttcaaaggttgttcaatggatttaatctcgtctaagcattgc 20954418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 21191604 - 21191731
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||| ||||||| |||||||||||| |||||||||||||||||||||| |  ||| ||||||||| |  ||||  ||||||  |||| |||||||||||    
T  21191604 acaaacgagagcattggaatcaacaagaaggaagcttgaagcatctgaagaaaagtgctcctgaagtc--aagtcctcctgaagtgatgacgtcatcaga 21191701  T
Q  119 agcaagttcatcagaagcatctcatcagaa 148  Q
    |||||||||||| |||||||||||||||||    
T  21191702 agcaagttcatctgaagcatctcatcagaa 21191731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 22154072 - 22153992
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||  ||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  22154072 cagaagctgaagttcatcaggagatgcaagacttaaa-gcttcaaaggctgttcaatggatttaatctcgtctaagcattgc 22153992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 12284780 - 12284678
Alignment:
Q  34 ggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcaga 133  Q
    ||||||||||||||||||||||||| |||||||| || ||| ||||||||| | |||||| | ||||  |||| ||||||||||||||||||||||||||    
T  12284780 ggaatcaacaaaaaggaagcttgaaacatctgaagagaagtgctcctgaagtc-aaagtgcttctgaagtgatgacgtcatcagaagcaagttcatcaga 12284682  T
Q  134 agca 137  Q
    ||||    
T  12284681 agca 12284678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 225
Target Start/End: Original strand, 32785692 - 32785882
Alignment:
Q  35 gaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaa 134  Q
    ||||||||||||||||||||| |||| |||||| |  | | ||||||||| |||| |||  |||||  || ||||||||| |||||||||||||| ||||    
T  32785692 gaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaaggcaaa-gtgcccctgaagtggtaacgtcattagaagcaagttcattagaa 32785790  T
Q  135 gc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||   |  |||  ||||| | |||||||||| ||||| ||||||||||| |||||||||| |||||| || |||||||||||||||||||||||    
T  32785791 gctgaaaatcactagaagttgtagttcatcatgagatgcaagacttaaa-gcttcaaaggttgttca-tggatttaatctcgtctaagcattgc 32785882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 12613527 - 12613649
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagt 125  Q
    ||||| |||||||||||||||||||||||||||||||||||| |  |||  | |||||| |  ||||| ||||||  |||| ||||||||||||||||||    
T  12613527 agagctatggaatcaacaaaaaggaagcttgaagcatctgaagaatagtgattctgaagtc--aagtgctcctgaagtgatgacgtcatcagaagcaagt 12613624  T
Q  126 tcatcagaagcatctcatcagaagc 150  Q
    |||| |||| || ||||||||||||    
T  12613625 tcattagaaccacctcatcagaagc 12613649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 38282778 - 38282704
Alignment:
Q  147 aagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcat 222  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  38282778 aagctctagttcatcaggagatgcaagacttaaa-gcttcaaaggttgttcaatggatttaatctcgtctaagcat 38282704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 1900560 - 1900480
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||| | |||||||||||||||| ||||||||||| |||||||||| | ||||||| |||||||||||||||||||||||    
T  1900560 cagaagatctagttcatcaggagatgcaagacttaaa-gcttcaaaggttattcaatggatttaatctcgtctaagcattgc 1900480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 1578189 - 1578124
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||| || ||| |||||||||    
T  1578189 acaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcctgaag 1578124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 225
Target Start/End: Original strand, 22201597 - 22201681
Alignment:
Q  140 tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||||||  || |||||||||||| ||||||||||| ||  ||||||||| |||||| |||||||||||||||||||||||    
T  22201597 tcatcagaagctaaagctcatcaggagatgcaagacttaaa-gcgacaaaggctgctcaatgcatttaatctcgtctaagcattgc 22201681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 20954178 - 20954226
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20954178 acaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaa 20954226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 225
Target Start/End: Complemental strand, 2267306 - 2267224
Alignment:
Q  140 tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||||||  ||||||||||||||| ||| |    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  2267306 tcatcagaagctacagttcatcaggagatgcaaca---taaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgc 2267224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 225
Target Start/End: Complemental strand, 7310132 - 7309953
Alignment:
Q  47 aggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc---atctcat 143  Q
    |||||||||  |||||||||| || ||| |||||||||||||||||| | ||||  |||| |||||||||||| ||  | ||||||||||   |  |||     
T  7310132 aggaagcttatagcatctgaagagaagtgctcctgaagacaaaagtgcttctgaagtgatgacgtcatcagaaacatct-catcagaagctgaagatcac 7310034  T
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    || |||||  || |||||||||||| ||||||||||| |||||||| ||||||||||| ||| | | ||||||||| |||||    
T  7310033 cataagctaaagctcatcaggagatgcaagacttaaa-gcttcaaaagctgttcaatggattcagtgtcgtctaaggattgc 7309953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 19717739 - 19717659
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||  |||||||  |||||| ||||||||||| |||||||||| ||||||||| ||||||||||||| |||||||||    
T  19717739 cagaagctaaagttcatatggagatgcaagacttaaa-gcttcaaaggttgttcaatggatttaatctcgtcgaagcattgc 19717659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 19717809 - 19717748
Alignment:
Q  89 aagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatcagaagc 150  Q
    ||||| ||||||  |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  19717809 aagtgctcctgaagtgatgacgtcatcataagcaagttcatcagaagcatctcatcagaagc 19717748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 115 - 225
Target Start/End: Original strand, 22427192 - 22427302
Alignment:
Q  115 cagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatct 211  Q
    ||||||||||||||||||||||   |  ||| ||||||||  ||||||||||||||| ||| |    |||||||||||| |||||||||  |||||||||    
T  22427192 cagaagcaagttcatcagaagctgaaaatcaccagaagctccagttcatcaggagatgcaacat---aaagcttcaaagactgttcaatagatttaatct 22427288  T
Q  212 cgtctaagcattgc 225  Q
    ||||||||||||||    
T  22427289 cgtctaagcattgc 22427302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 225
Target Start/End: Original strand, 26701875 - 26702074
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagt 125  Q
    ||||| |||||||||||| || ||||||||||||| | |||| |  ||| ||||||||| |||  ||| || |||  |||| || |||||||||||||||    
T  26701875 agagctatggaatcaacataagggaagcttgaagcgtatgaagaaaagtgctcctgaagtcaa--gtgctcatgaagtgatgacatcatcagaagcaagt 26701972  T
Q  126 tcatcagaa---gcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcat 222  Q
    |||||||||   | |  ||| ||||||||  |||||||||| ||||   |||||| ||||||||||||||||||  ||| ||| |||||||| | |||||    
T  26701973 tcatcagaaactgaagatcaccagaagctaaagttcatcagaagatgggagactt-aaagcttcaaaggctgttatatggattcaatctcgtttgagcat 26702071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 48704419 - 48704343
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagca 221  Q
    ||||||||  |||||||||| |||| ||||||||||| |||||||||| ||||||||| |||||||||||| ||||||    
T  48704419 cagaagctaaagttcatcagaagatgcaagacttaaa-gcttcaaaggttgttcaatggatttaatctcgtttaagca 48704343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 48704556 - 48704491
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    |||||||||||||||| |||||||||||| |||||||||||||||| || || ||| |||||||||    
T  48704556 acaaaagagagcaatgaaatcaacaaaaatgaagcttgaagcatctaaagagaagtgctcctgaag 48704491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 1578081 - 1578002
Alignment:
Q  145 agaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||  |||| |||||||||| ||||||||| | |||||||||| ||||||||  |||||||||||||||||||||||    
T  1578081 agaagctaaagtttatcaggagatgcaagacttaga-gcttcaaaggttgttcaatagatttaatctcgtctaagcattgc 1578002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 12284661 - 12284558
Alignment:
Q  122 aagttcatcagaagcatc-tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagc 220  Q
    ||||||||||||||||   ||| ||||||||  |||||||||| |||| ||||||||| | |||||||||| ||||||||| ||| ||||||||| ||||    
T  12284661 aagttcatcagaagcaagatcaccagaagctgaagttcatcagaagatgcaagacttaga-gcttcaaaggttgttcaatggattcaatctcgtccaagc 12284563  T
Q  221 attgc 225  Q
    |||||    
T  12284562 attgc 12284558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 17024706 - 17024822
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||||||| |  ||   | || |||    ||||| | ||||  ||||||||||||||||    
T  17024706 acaaatgagatcaatggaatcaacaagaaggaagcttgaagcatctgaagaaaagaggttctaaag--ttaagtgcttctgaagtgataacgtcatcaga 17024803  T
Q  119 agcaagttcatcagaagca 137  Q
    |||||||||||||||||||    
T  17024804 agcaagttcatcagaagca 17024822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 30893412 - 30893314
Alignment:
Q  25 gagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaag 124  Q
    |||||| | |||||||||||| ||||| ||||||||||||||| || ||| ||||||||| | |||||  ||||||  |||| |||||||||||||||||    
T  30893412 gagagctaaggaatcaacaaagaggaaacttgaagcatctgaagagaagtgctcctgaagtc-aaagtactcctgaagtgatgacgtcatcagaagcaag 30893314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 1900689 - 1900619
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaa 89  Q
    |||||||||||||| |||||||||||||||||||||| || | |||||| || | | ||||||||||||||    
T  1900689 acaaaagagagcaaaggaatcaacaaaaaggaagcttaaaacgtctgaagagaactgctcctgaagacaaa 1900619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 2268733 - 2268664
Alignment:
Q  154 agttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattg 224  Q
    ||||||| ||||||| ||||||||||  |||||||||| ||||||||| |||||||||||||||| |||||    
T  2268733 agttcattaggagatgcaagacttaag-gcttcaaaggttgttcaatggatttaatctcgtctaatcattg 2268664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 22154230 - 22154165
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    ||||||||||||||  ||||||||||||| |||||||||||| |||||| || ||| |||||||||    
T  22154230 acaaaagagagcaaatgaatcaacaaaaatgaagcttgaagcgtctgaagagaagtgctcctgaag 22154165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 23036405 - 23036465
Alignment:
Q  157 tcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    ||||||| |||| ||||||||||| |||||||||||| ||||||| ||||||||||||||||    
T  23036405 tcatcagaagatgcaagacttaaa-gcttcaaaggctattcaatggatttaatctcgtctaa 23036465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 48704468 - 48704427
Alignment:
Q  110 gtcatcagaagcaagttcatcagaagcatctcatcagaagct 151  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  48704468 gtcatcagaagctagttcatcagaagcatctcatcagaagct 48704427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 18896312 - 18896360
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||| |||||||||||||||||||| |||||||| |||||||||||||    
T  18896312 acaaatgagagcaatggaatcaacaagaaggaagcatgaagcatctgaa 18896360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 21029114 - 21029019
Alignment:
Q  39 caacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    ||||||||||||||||| |||||| |||| |  ||| ||||| ||| |||  ||| ||||||  |||| ||||||||| |||||||||||||||||||    
T  21029114 caacaaaaaggaagcttaaagcatatgaagaaaagtgctcctcaagtcaa--gtgctcctgaagtgatgacgtcatcaaaagcaagttcatcagaagc 21029019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 29215978 - 29215932
Alignment:
Q  179 aaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||||    
T  29215978 aaagcttcaaaggttgtttaatggatttaatctcgtctaagcattgc 29215932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 38282864 - 38282795
Alignment:
Q  77 tcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatcaga 147  Q
    ||||||||||||| ||| ||||||  | || || |||||||||||||||| ||||||||||||||||||||    
T  38282864 tcctgaagacaaa-gtgctcctgaagtaatgacctcatcagaagcaagtttatcagaagcatctcatcaga 38282795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 19717861 - 19717796
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    ||||||||| |||| |||||||| ||||||||||||| |||| |||||| || ||| |||||||||    
T  19717861 acaaaagagggcaaaggaatcaataaaaaggaagcttaaagcgtctgaagagaagtgctcctgaag 19717796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 21703111 - 21703051
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||||||||||| ||| ||||||  |||| || |||||||||||||||||||||||||||    
T  21703111 ctcctgaagacaaa-gtgctcctgaagtgatgacatcatcagaagcaagttcatcagaagca 21703051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 35402011 - 35401955
Alignment:
Q  157 tcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgt 214  Q
    ||||||| |||| ||||||||||| ||||||||| |||||||||| ||||||||||||    
T  35402011 tcatcagaagatgcaagacttaaa-gcttcaaagactgttcaatggatttaatctcgt 35401955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 46089266 - 46089218
Alignment:
Q  89 aagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    ||||| ||||||  |||| ||||||||||||||||||||||||||||||    
T  46089266 aagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagca 46089218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 39200891 - 39200937
Alignment:
Q  179 aaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||||| ||||||||||| |||||||||| | ||||||||||    
T  39200891 aaagcttcaaaagctgttcaatggatttaatctcatgtaagcattgc 39200937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 136
Target Start/End: Complemental strand, 21984844 - 21984811
Alignment:
Q  103 tgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||| |||||||||||||||||||||||||||||    
T  21984844 tgatgacgtcatcagaagcaagttcatcagaagc 21984811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 24227712 - 24227749
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttg 56  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  24227712 acaaatgagagcaatggaatctacaaaaaggaagcttg 24227749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 137
Target Start/End: Original strand, 34255341 - 34255370
Alignment:
Q  108 acgtcatcagaagcaagttcatcagaagca 137  Q
    ||||||||||||||||||||||||||||||    
T  34255341 acgtcatcagaagcaagttcatcagaagca 34255370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 48
Target Start/End: Complemental strand, 35402175 - 35402146
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaag 48  Q
    ||||||||||||||||||||||||||||||    
T  35402175 acaaaagagagcaatggaatcaacaaaaag 35402146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 136
Target Start/End: Complemental strand, 42284875 - 42284842
Alignment:
Q  103 tgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||| |||||||||||||||||||||||||||||    
T  42284875 tgatgacgtcatcagaagcaagttcatcagaagc 42284842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 48570014 - 48570074
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||||||||||| ||| ||||||  |||| |||||||||||| ||||||||||| |||||    
T  48570014 ctcctgaagacaaa-gtgctcctgaaatgatgacgtcatcagaaacaagttcatcataagca 48570074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 2327206 - 2327265
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| | ||||  |||| |||||||||||||||||||||||| ||||    
T  2327206 ctcctgaagacaaa-gtgcttctgaagtgatgacgtcatcagaagcaagttcatcaaaagc 2327265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 21134991 - 21135023
Alignment:
Q  103 tgataacgtcatcagaagcaagttcatcagaag 135  Q
    |||| ||||||||||||||||||||||||||||    
T  21134991 tgatgacgtcatcagaagcaagttcatcagaag 21135023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 23025043 - 23024984
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| | ||||  |||| |||||||||||||||||||||||| ||||    
T  23025043 ctcctgaagacaaa-gtgcttctgaagtgatgacgtcatcagaagcaagttcatcaaaagc 23024984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 25448331 - 25448390
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||  ||||||  |||| |||||||||||||||||||||| ||||||    
T  25448331 ctcctgaagacaaa-gtactcctgaagtgatgacgtcatcagaagcaagttcattagaagc 25448390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 30893298 - 30893227
Alignment:
Q  154 agttcatcaggagatacaagacttaaaagcttc-aaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||||||||| |||||||| |||| ||| ||||| |||||| || ||| ||||||||| |||||||||    
T  30893298 agttcatcaggagatgcaagactt-aaagtttcaaaaggttgttcattggattcaatctcgtccaagcattgc 30893227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 44821353 - 44821401
Alignment:
Q  88 aaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||| ||||||  |||| ||||||||||||||||||| |||||||||    
T  44821353 aaagtgctcctgaagtgatgacgtcatcagaagcaagtttatcagaagc 44821401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 25 - 225
Target Start/End: Complemental strand, 16130 - 15930
Alignment:
Q  25 gagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaag 124  Q
    |||||| | |||||||||||||||||||||||||||||||||| ||  || ||||||||| |||||||| || |||  |||| || ||||||||||||||    
T  16130 gagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagagatgtgctcctgaagtcaaaagtgctcatgaagtgatgacatcatcagaagcaag 16031  T
Q  125 ttcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttc-aaaggctgttcaatgaatttaatctcgtctaagcatt 223  Q
    |||||||||| ||||||||||||||||  ||||||||||||||| |||||||| |||||||| ||||  ||||||||| ||| ||||||||| ||| |||    
T  16030 ttcatcagaaccatctcatcagaagctaaagttcatcaggagatgcaagactt-aaagcttcaaaagattgttcaatggattcaatctcgtccaagaatt 15932  T
Q  224 gc 225  Q
    ||    
T  15931 gc 15930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 18375 - 18596
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||||||| | |||||| || |||  |||| |||||||||||    
T  18375 acaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtc-aaagtgctcatgaagtgatgacgtcatcaga 18473  T
Q  119 agcaagttcatcagaagcatctcat-----------------cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatg 201  Q
    |||||||||||||||||||||||||                 ||||||||  |||||||||||||| |||||| || |||||||||||||||||||||||    
T  18474 agcaagttcatcagaagcatctcatcataagctgaagatcaccagaagctgcagttcatcaggagacacaaga-tttaaagcttcaaaggctgttcaatg 18572  T
Q  202 aatttaatctcgtctaagcattgc 225  Q
     |||||||||||||||||||||||    
T  18573 gatttaatctcgtctaagcattgc 18596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 8e-45; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 45833746 - 45833524
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||| || ||  |||||||||||||||||| || |||  |||| |||||||||||    
T  45833746 acaaaagagagcaaacgaatcaacaaaaaggaagcttgaagcatctgaaaagaagcgctcctgaagacaaaagtgctcttgaagtgatgacgtcatcaga 45833647  T
Q  119 agcaagttcatcagaagcatctcatcaga-----------------agctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatg 201  Q
    |||||||| |||| |||||||||||||||                 |||| |||||||||||||||| |||||||| ||||||||||||| |||||||||    
T  45833646 agcaagtttatcataagcatctcatcagaagctaaagatcaccagaagctctagttcatcaggagatgcaagactt-aaagcttcaaaggttgttcaatg 45833548  T
Q  202 aatttaatctcgtctaagcattgc 225  Q
     |||||||||||||||||||||||    
T  45833547 gatttaatctcgtctaagcattgc 45833524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 56034909 - 56034704
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||||||  |||||||||||||| ||||||||||| |||||| |  |||  ||||||||  ||||||| | ||||  |||| |||| ||||||    
T  56034909 acaaaagagagcaaatgaatcaacaaaaagaaagcttgaagcgtctgaagaaaagtgatcctgaagt-aaaagtgcttctgaagtgatgacgtaatcaga 56034811  T
Q  119 agcaagttcatcagaagcatc-tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtcta 217  Q
    |||||||||||||||||||   ||| ||||||||  |||||||||| |||| ||||||||||| ||||||||| |||||||||| ||||||||||||| |    
T  56034810 agcaagttcatcagaagcaagatcaccagaagctgaagttcatcagaagatgcaagacttaaa-gcttcaaagactgttcaatggatttaatctcgtcca 56034712  T
Q  218 agcattgc 225  Q
    ||||||||    
T  56034711 agcattgc 56034704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 16632789 - 16632570
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||| | |||||| | ||||  |||| ||  |||||||    
T  16632789 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctaaagtc-aaagtgcttctgaagtgatgacaccatcaga 16632691  T
Q  119 agcaagttcatcagaagcatctcatc---------------agaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaa 203  Q
    |||||| |||||| ||||||||||||               |||||||  ||||||||||||||| |||||||| ||||||||||||| ||||||||| |    
T  16632690 agcaaggtcatcaaaagcatctcatcagaagcaagatcactagaagctaaagttcatcaggagatgcaagactt-aaagcttcaaaggttgttcaatgga 16632592  T
Q  204 tttaatctcgtctaagcattgc 225  Q
    ||||||||||| ||||||||||    
T  16632591 tttaatctcgtataagcattgc 16632570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 29680319 - 29680525
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||| || |||  |||||||| | |||||| ||||||  |||| |||||||||||    
T  29680319 acaaaagagagcaaaggaatcaacaaaaaggaagcttgaagtatctgaagagaagtgttcctgaagtc-aaagtgctcctgaagtgatgacgtcatcaga 29680417  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||| |  |||||||||||   |  ||| |||||||| ||||| | |||||||| |||||||| |||||| |||||| ||||||||| ||||||||| |||    
T  29680418 agc-atctcatcagaagctgaagatcaccagaagctctagtttaccaggagatgcaagactt-aaagctccaaaggttgttcaatggatttaatcttgtc 29680515  T
Q  216 taagcattgc 225  Q
    ||||||||||    
T  29680516 taagcattgc 29680525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 14833743 - 14833526
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| | ||||||||||||| || |||||||||||||||  | ||| |||||||||||||||||| ||||||  |||||| |||||||||    
T  14833743 acaaaagagagcaaagaaatcaacaaaaagaaaacttgaagcatctgaagcgaagtgctcctgaagacaaaagtgctcctgaagtgataaagtcatcaga 14833644  T
Q  119 agcaagttcatcagaagcatc------------tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaattt 206  Q
    |||| |||||| |||||||||            ||  |||||| | || ||||||||||||| |||||||| ||||||||||||| ||||||||  |||     
T  14833643 agcaggttcataagaagcatcagaagctgaagatctccagaagttgtaattcatcaggagatgcaagactt-aaagcttcaaaggatgttcaatagattc 14833545  T
Q  207 aatctcgtctaagcattgc 225  Q
    |||||||||||||||||||    
T  14833544 aatctcgtctaagcattgc 14833526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 14604668 - 14604887
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | ||||||||||||||||||||||||| | |||||| || ||| ||||||||| |||| ||| ||||||  | || |||||||||||    
T  14604668 acaaaagagagctaaggaatcaacaaaaaggaagcttgaaacgtctgaagagaagtgctcctgaagtcaaa-gtgctcctgaagtaatgacgtcatcaga 14604766  T
Q  119 agcaagttcatcagaagcatctcatcagaagc---------------tttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaa 203  Q
    ||||||||||||||||||||||||||||||||               |  | ||||||||||||| ||||||||||| |||||||||||| ||| ||| |    
T  14604767 agcaagttcatcagaagcatctcatcagaagcaagatcatcagaagctaaacttcatcaggagatccaagacttaaa-gcttcaaaggctattctatgga 14604865  T
Q  204 tttaatctcgtctaagcattgc 225  Q
    || |||||||||||||||||||    
T  14604866 ttcaatctcgtctaagcattgc 14604887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 19620853 - 19621042
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||| ||  || ||||||||| |||| ||||||||||  |||| |||||||        
T  19620853 acaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagagacgtgctcctgaagtcaaa-gtgatcctgaagtgatgacgtcat---- 19620947  T
Q  119 agcaagttcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
               ||||||||||||||||||||||  ||||||||||||||| ||||| || ||||||||||||| ||||||||| ||| ||||||||| ||    
T  19620948 -----------cagaagcatctcatcagaagctgaagttcatcaggagatgcaagagtt-aaagcttcaaaggttgttcaatggattcaatctcgtccaa 19621035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 9141213 - 9141095
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||| | || |||||| || ||| |||||||||||||||||| ||||||  |||| |||||||||||    
T  9141213 acaaaagagagcaaaggaatcaacaaaaaggaagcttaaggcgtctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatgacgtcatcaga 9141114  T
Q  119 agcaagttcatcagaagca 137  Q
     |||||||| |||||||||    
T  9141113 tgcaagttcttcagaagca 9141095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 12601451 - 12601320
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||| | ||||||||| || |||  |||| |||||||||||| ||||||  |||| | ||||||| |    
T  12601451 acaaaagagagcaaaggaatcaacaaaaaggaagcttaaggcatctgaagagaagtgttccttaagacaaaagtgctcctgaagtgatgatgtcatcaaa 12601352  T
Q  119 agcaagttcatcagaagcatctcatcagaagc 150  Q
    ||||  ||||| ||||||||||||||||||||    
T  12601351 agcattttcataagaagcatctcatcagaagc 12601320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 225
Target Start/End: Complemental strand, 19885036 - 19884832
Alignment:
Q  24 agagagcaatggaatcaacaaa--aaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagc-tgataacgtcatcagaag 120  Q
    ||||||||||||||||||||||  |||||||||| |||| |||||| |  | | |||||||||||||| ||| || |||   ||   |||||||||||||    
T  19885036 agagagcaatggaatcaacaaaccaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaa-gtgctcttgaaagtggcgacgtcatcagaag 19884938  T
Q  121 caagttcatcagaagcatc---tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtcta 217  Q
    ||||||||||||||||      ||| |||||||| |||||||||||||||| |||||||| ||||||||||||| ||||| ||| |||||||||||||||    
T  19884937 caagttcatcagaagctgacaatcaccagaagctgtagttcatcaggagatgcaagactt-aaagcttcaaaggatgttc-atggatttaatctcgtcta 19884840  T
Q  218 agcattgc 225  Q
    ||||||||    
T  19884839 agcattgc 19884832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 37435282 - 37435399
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||| || ||| |||||||||  || |||| ||||||  |||| |||||||||||    
T  37435282 acaaaagagagcaaatgaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaag-taatagtgctcctgaagtgatgacgtcatcaga 37435380  T
Q  119 agcaagttcatcagaagca 137  Q
    |||||| ||||||||||||    
T  37435381 agcaaggtcatcagaagca 37435399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 6642031 - 6641902
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||| |||||||||||| ||||||| |||||||||||||||||||||| |   || || |||||| |||  ||| ||||||  |||| ||||||||| |    
T  6642031 acaaatgagagcaatggagtcaacaagaaggaagcttgaagcatctgaagaaatgtgcttctgaagtcaa--gtgctcctgaagtgatgacgtcatcata 6641934  T
Q  119 agcaagttcatcagaagcatctcatcagaagc 150  Q
    ||||||||||||||||||| ||||||||||||    
T  6641933 agcaagttcatcagaagcacctcatcagaagc 6641902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 222
Target Start/End: Complemental strand, 10073273 - 10073068
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||| ||||||||| |||||||||||||||||||||| |||| |||||| |  ||| |||||||||||||| ||| ||||||  || | | |||||||||    
T  10073273 acaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaagtgctcctgaagacaaa-gtgctcctgaagtggtgatgtcatcaga 10073175  T
Q  119 agc--aagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcg 213  Q
    |||  ||  ||| |||||||   |  | | |||||||  |||||||||||||||| |||||||| ||||||||||||| ||||| ||| |||||||||||    
T  10073174 agctgaaaatcaccagaagctgaaaattaccagaagcagtagttcatcaggagatgcaagactt-aaagcttcaaaggttgttc-atggatttaatctcg 10073077  T
Q  214 tctaagcat 222  Q
    | |||||||    
T  10073076 tttaagcat 10073068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 37435436 - 37435516
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||  ||||||||||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  37435436 cagaagctgaagttcatcaggagatgcaagactt-aaagcttcaaaggttgttcaatggatttaatctcgtccaagcattgc 37435516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 23123641 - 23123562
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattg 224  Q
    ||||||||  ||||||||||||||| ||||||||||| |||||||||  ||||||||||||||||||||||||||| ||||    
T  23123641 cagaagctgaagttcatcaggagatgcaagacttaaa-gcttcaaagattgttcaatgaatttaatctcgtctaagtattg 23123562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 413249 - 413132
Alignment:
Q  108 acgtcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaat 204  Q
    |||||||||||||||||||||||||||||   |  ||| ||||||||  ||||||||||||||| |||  |||||| |||||||| | ||||||||| ||    
T  413249 acgtcatcagaagcaagttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagattcaa--cttaaa-gcttcaaaagttgttcaatggat 413153  T
Q  205 ttaatctcgtctaagcattgc 225  Q
    | |||||||||||||||||||    
T  413152 tcaatctcgtctaagcattgc 413132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 12811079 - 12811159
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||| |||||||| ||||||| ||||||||||| |||||||||| ||||||||| ||||| | |||||||||||||||    
T  12811079 cagaagctctagttcattaggagatgcaagacttaaa-gcttcaaaggttgttcaatggatttagtttcgtctaagcattgc 12811159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 40846383 - 40846319
Alignment:
Q  87 aaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatcagaagct 151  Q
    ||||||| ||||||  |||| |||||||||||| |||||||||||||||||||||||||||||||    
T  40846383 aaaagtgctcctgaagtgatgacgtcatcagaaacaagttcatcagaagcatctcatcagaagct 40846319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 3483963 - 3483851
Alignment:
Q  115 cagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatct 211  Q
    ||||||||||||||||||||||   |  ||| |||||| | |||||||| | ||||| ||||||||||| ||||||||  || ||||||| |||||||||    
T  3483963 cagaagcaagttcatcagaagctgaagatcaccagaagttatagttcattaagagatgcaagacttaaa-gcttcaaaaactattcaatggatttaatct 3483865  T
Q  212 cgtctaagcattgc 225  Q
    ||||||||||||||    
T  3483864 cgtctaagcattgc 3483851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 12810955 - 12811002
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctga 66  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  12810955 acaaaagagagcaatggaatcaacaaaaaggaagcttgtagcatctga 12811002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 22675455 - 22675501
Alignment:
Q  179 aaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  22675455 aaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgc 22675501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 12601291 - 12601231
Alignment:
Q  164 gagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||| ||||||||||| || ||||||||||||||||| |||||||||||||||||||||||    
T  12601291 gagatgcaagacttaaa-gcgtcaaaggctgttcaatggatttaatctcgtctaagcattgc 12601231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 225
Target Start/End: Original strand, 19911777 - 19911861
Alignment:
Q  140 tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||||| | |||||||||||||||| |||||||| ||||||| ||||| ||||||||  ||| ||||||||| |||||||||    
T  19911777 tcatcagaagttgtagttcatcaggagatgcaagactt-aaagctttaaaggttgttcaatagattcaatctcgtccaagcattgc 19911861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 55380593 - 55380528
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    |||||||||||| | ||||||||||||||||||||||||||| |||||| || ||| |||||||||    
T  55380593 acaaaagagagctaaggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcctgaag 55380528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 3395799 - 3395720
Alignment:
Q  145 agaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||| |||||||||||||||| |||||||| ||| ||||||| | ||||||||| ||| ||| |||||||||||||||    
T  3395799 agaagctatagttcatcaggagatgcaagactt-aaatcttcaaaagttgttcaatggattaaatatcgtctaagcattgc 3395720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 17540769 - 17540721
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  17540769 acaaatgagagcaatggaatcaacaagaaggaagcttgaagcatctgaa 17540721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 13576017 - 13576095
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||  ||||||||||||||| ||| |    |||||||||||| |||||||||| |||||||||||||||||||||||    
T  13576017 cagaagctgcagttcatcaggagatgcaacat---aaagcttcaaagcctgttcaatggatttaatctcgtctaagcattgc 13576095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 3395976 - 3395906
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaa 89  Q
    |||||||||||||| |||||||||||||||||||||| |||| |||||| || | | ||||||||| ||||    
T  3395976 acaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaactgctcctgaagtcaaa 3395906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 19666567 - 19666502
Alignment:
Q  159 atcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||||| ||||||||||| |||| ||||| | ||||||| |||||||||||||||||||||||    
T  19666567 atcaggagatgcaagacttaaa-gcttgaaaggttattcaatggatttaatctcgtctaagcattgc 19666502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 37985525 - 37985590
Alignment:
Q  156 ttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcat 222  Q
    ||||||| ||||| ||||||||||| |||||||||| ||||||||| |||||||||| |||||||||    
T  37985525 ttcatcatgagatgcaagacttaaa-gcttcaaaggttgttcaatggatttaatctcatctaagcat 37985590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 14904257 - 14904337
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||| | |||||||||||||||| |||||| |||| |||||||| ||| ||||| | ||||||||||||||| |||||||    
T  14904257 cagaagttgtagttcatcaggagatgcaagacctaaa-gcttcaaaagctattcaaaggatttaatctcgtctaggcattgc 14904337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 14571302 - 14571243
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| ||||||  |||| |||||||||||||||||||||||||||||    
T  14571302 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagc 14571243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 225
Target Start/End: Complemental strand, 17247487 - 17247373
Alignment:
Q  111 tcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaattta 207  Q
    ||||||||||||||||||||||||||   |  ||| ||||||||  |||||||||||||||  |   |||||| |||||||| | ||||||||| ||| |    
T  17247487 tcatcagaagcaagttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagatgaat--cttaaa-gcttcaaaagttgttcaatggattca 17247391  T
Q  208 atctcgtctaagcattgc 225  Q
    ||||||||||||||||||    
T  17247390 atctcgtctaagcattgc 17247373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 17787798 - 17787846
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||||    
T  17787798 acaaatgagagcaatgaaatcaacaagaaggaagcttgaagcatctgaa 17787846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 40846420 - 40846368
Alignment:
Q  32 atggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    |||||||||||||||||||||||||||||||||||| |  ||| |||||||||    
T  40846420 atggaatcaacaaaaaggaagcttgaagcatctgaagaaaagtgctcctgaag 40846368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 54680241 - 54680147
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagc 121  Q
    ||||||| |||||||||||||||||||||| |||| |||||| |  | | ||||||||||| |||||| ||||||  || | ||||||||||||||    
T  54680241 agagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaattgctcctgaagac-aaagtgctcctgaagtggtgacgtcatcagaagc 54680147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 210
Target Start/End: Complemental strand, 55380504 - 55380434
Alignment:
Q  140 tcatcagaagctttagttcatcaggagatacaagacttaaaagcttc-aaaggctgttcaatgaatttaatc 210  Q
    ||||||||||||  ||||||| ||||||| |||||||| |||||||| ||||||||||||||| ||||||||    
T  55380504 tcatcagaagctgaagttcattaggagatgcaagactt-aaagcttcaaaaggctgttcaatggatttaatc 55380434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 10693126 - 10693035
Alignment:
Q  79 ctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagat 168  Q
    ||||||||||| ||| ||||||  |||| |||||||||||||||||||||||||||||      ||| |||||||| ||||||||||||||||    
T  10693126 ctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagctgagaatcaccagaagctgtagttcatcaggagat 10693035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 10906892 - 10906801
Alignment:
Q  79 ctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagat 168  Q
    ||||||||||| ||| ||||||  |||| |||||||||||||||||||||||||||||      ||| |||||||| ||||||||||||||||    
T  10906892 ctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagctgagaatcaccagaagctgtagttcatcaggagat 10906801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 13575905 - 13576006
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||| |||||||||  ||||||||||||||||||||| |||| |||||| |  | | ||||||||||| |||||| ||||||  || | |||||||||||    
T  13575905 acaatagagagcaaatgaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagac-aaagtgctcctgaagtggtgacgtcatcaga 13576003  T
Q  119 agc 121  Q
    |||    
T  13576004 agc 13576006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 41114514 - 41114562
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||| |||||||||||||||||| | ||||||||||||||||| ||||    
T  41114514 acaaatgagagcaatggaatcaacgagaaggaagcttgaagcatatgaa 41114562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 8105947 - 8105889
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaag 135  Q
    |||||||||||||| ||| ||||||  |||| | ||||||||||||||||||||||||||    
T  8105947 ctcctgaagacaaa-gtgctcctgaagtgatgatgtcatcagaagcaagttcatcagaag 8105889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 15139427 - 15139357
Alignment:
Q  154 agttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||||| ||||   ||||||||| | |||||||| ||||||||| |||||||||||| ||||||||||    
T  15139427 agttcatcagaagatgatagacttaaa-gattcaaaggttgttcaatggatttaatctcgtttaagcattgc 15139357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 23750730 - 23750664
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttc-aaaggctgttcaatgaatttaatc 210  Q
    ||||||||  ||||||||||||||| |||||||| |||||||| ||||| ||||||||| ||||||||    
T  23750730 cagaagctgaagttcatcaggagatgcaagactt-aaagcttcaaaaggttgttcaatggatttaatc 23750664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 9141096 - 9141043
Alignment:
Q  170 caagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattg 224  Q
    ||||||||||| ||||||| || ||||||||| ||| ||||||||||||||||||    
T  9141096 caagacttaaa-gcttcaagggttgttcaatggattcaatctcgtctaagcattg 9141043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 11916065 - 11916027
Alignment:
Q  25 gagagcaatggaatcaacaaaaaggaagcttgaagcatc 63  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  11916065 gagagcaatgaaatcaacaagaaggaagcttgaagcatc 11916027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 3497977 - 3497936
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||||| |||||||||||||||||||||| |||| ||||||    
T  3497977 agagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaa 3497936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 136
Target Start/End: Complemental strand, 6517737 - 6517704
Alignment:
Q  103 tgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||| |||||||||||||||||||||||||||||    
T  6517737 tgatgacgtcatcagaagcaagttcatcagaagc 6517704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 16853823 - 16853782
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||||| |||||||||||||||||||||| |||| ||||||    
T  16853823 agagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaa 16853782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 17398543 - 17398576
Alignment:
Q  103 tgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||| |||||||||||||||||||||||||||||    
T  17398543 tgatgacgtcatcagaagcaagttcatcagaagc 17398576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 136
Target Start/End: Complemental strand, 22191090 - 22191057
Alignment:
Q  103 tgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||| |||||||||||||||||||||||||||||    
T  22191090 tgatgacgtcatcagaagcaagttcatcagaagc 22191057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 3105270 - 3105329
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||  ||| ||||||  |||| ||||||||| |||||||||||||||||||    
T  3105270 ctcctgaagacaag-gtgctcctgaagtgatgacgtcatcaaaagcaagttcatcagaagc 3105329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 20977707 - 20977648
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| | ||||  |||| ||||||||||||||||||||| |||||||    
T  20977707 ctcctgaagacaaa-gtgcttctgaagtgatgacgtcatcagaagcaagttcaccagaagc 20977648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 22089869 - 22089809
Alignment:
Q  89 aagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatcagaag 149  Q
    ||||| ||||||  ||||||||||||  ||||||||| ||||||||| | |||||||||||    
T  22089869 aagtgctcctgaagtgataacgtcattcgaagcaagtgcatcagaagtacctcatcagaag 22089809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 224
Target Start/End: Original strand, 4701 - 4921
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||| || ||| ||||||||| | |||||| ||||||  |||| | |||||||||    
T  4701 acaaaagagagcaaaggaatcaacaaaaaggaagtttgaagcatctgaagagaagtgctcctgaagtc-aaagtgctcctgaagtgatgatgtcatcaga 4799  T
Q  119 agcaagttcatcagaagcatctcat-----------------cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatg 201  Q
    |||||||||||||||||||||||||                 |||||||| ||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  4800 agcaagttcatcagaagcatctcatcataagctgaagatcaccagaagctctagttcatcagaagatgcaagactt-aaagcttcaaaggctgttcaatg 4898  T
Q  202 aatttaatctcgtctaagcattg 224  Q
     ||||||||||||||||||||||    
T  4899 gatttaatctcgtctaagcattg 4921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 34 - 225
Target Start/End: Original strand, 556 - 761
Alignment:
Q  34 ggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcaga 133  Q
    |||||||||||||||||||||| |||  |||||| || ||| |||||||||||||||||| ||||||  |||| ||||||| ||||||||||||||||||    
T  556 ggaatcaacaaaaaggaagcttaaagtgtctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatgacgtcattagaagcaagttcatcaga 655  T
Q  134 agcatctcat---------------cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    ||||||||||               ||||||||  ||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||    
T  656 agcatctcatcagaagcaagatcaccagaagctaaagttcatcaggagatgcaagacttaaaa-cttcaaagactgttcaatgaatttaatctcgtctaa 754  T
Q  219 gcattgc 225  Q
    |||||||    
T  755 gcattgc 761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 32829 - 32621
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||| || |||||||||||||||||||||| | || |||||| |  ||| || ||||||||||||||| ||||||  |||| |||||||||||    
T  32829 acaaaagagagtaaaggaatcaacaaaaaggaagcttaaggcgtctgaagaaaagtgcttctgaagacaaaagtgctcctgaagtgatgacgtcatcaga 32730  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    || |||||||||||||||   |  ||| || ||  | |||||||||||||||| |||||||| |||||||||||| |||||||||| |||||||||||||    
T  32729 agtaagttcatcagaagctaaagatcaccacaacttgtagttcatcaggagatgcaagactt-aaagcttcaaagactgttcaatggatttaatctcgtc 32631  T
Q  216 taagcattgc 225  Q
    ||||||||||    
T  32630 taagcattgc 32621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 49674 - 49468
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||| | || || ||| || ||| ||| |||||||||||||| ||||||  |||| || ||||||||    
T  49674 acaaaagagagcaaaggaatcaacaaaaaggaagcttaaggcgtc-gaagagaagtgctcttgaagacaaaagtgctcctgaagtgatgacttcatcaga 49576  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||  | ||||||||||   |  ||| |||||| | |||||||||||||||| |||| |||||| |||||||||  ||||||||| |||||||||||||    
T  49575 agcatct-catcagaagctgaagatcaccagaagttgtagttcatcaggagatgcaagtcttaaa-gcttcaaagtttgttcaatggatttaatctcgtc 49478  T
Q  216 taagcattgc 225  Q
    ||||||||||    
T  49477 taagcattgc 49468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 19156531 - 19156324
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| || ||||||||||||||||||| |||| |||||| || ||| ||||||||| | |||||| ||||||  |||| || ||||||||    
T  19156531 acaaaagagagcaaagggatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagtc-aaagtgctcctgaagtgatgacatcatcaga 19156433  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||||||||||||||||   |  ||| |||||| | |||||||||| ||||| ||||| || ||||||||||||||||||||||| |||||||||||||    
T  19156432 agcaagttcatcagaagctgaagatcaccagaagttgtagttcatcaagagatgcaagaatt-aaagcttcaaaggctgttcaatggatttaatctcgtc 19156334  T
Q  216 taagcattgc 225  Q
    || |||||||    
T  19156333 tatgcattgc 19156324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 35 - 225
Target Start/End: Original strand, 16681122 - 16681326
Alignment:
Q  35 gaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaa 134  Q
    ||||||||||||| ||||||| |||| |||||| || ||| |||||||||||||||||| || |||  |||| |||||||||||||||||||||||||||    
T  16681122 gaatcaacaaaaatgaagcttaaagcgtctgaagagaagtgctcctgaagacaaaagtgctcatgaagtgatgacgtcatcagaagcaagttcatcagaa 16681221  T
Q  135 gcatctcatc---------------agaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaag 219  Q
    ||||||||||               |||||||  ||||||||||||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||    
T  16681222 gcatctcatcataagcaagatcactagaagctaaagttcatcaggagatgcaagactt-agagcttcaaaggctgttcaatggatttaatctcgtctaag 16681320  T
Q  220 cattgc 225  Q
    ||||||    
T  16681321 cattgc 16681326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 29693666 - 29693443
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaa-gtgatcctgagctgataacgtcatcag 117  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||||| || ||| ||| ||||||||||| ||| ||||||  |||| ||||||||||    
T  29693666 acaaaagagagcagaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcttgaagacaaaaagtgctcctgaagtgatgacgtcatcag 29693567  T
Q  118 aagcaagttcatcagaagcatctcatcagaagc-----------------tttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaat 200  Q
    |||||||||||||||||||||||||||| ||||                 | |||||||| ||||||| |||||||| |||||| ||||| ||||| |||    
T  29693566 aagcaagttcatcagaagcatctcatcataagctgaagatcaccataagttgtagttcattaggagatgcaagactt-aaagctccaaagactgtttaat 29693468  T
Q  201 gaatttaatctcgtctaagcattgc 225  Q
    |||||||||||||||||||||||||    
T  29693467 gaatttaatctcgtctaagcattgc 29693443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 18120926 - 18121132
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||||||  ||||||||||||||||||||| |||| | |||| || | | |||||||||||||| ||| ||||||  |||| ||| |||||||    
T  18120926 acaaaagagagcaaatgaatcaacaaaaaggaagcttaaagcgtttgaagagaactgctcctgaagacaaa-gtgctcctgaagtgatgacgccatcaga 18121024  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||  | ||||||||||   |  ||| |||||||| |||||||||||||||| ||||||||||| | |||||||||||||||||| |||||||||||||    
T  18121025 agcatct-catcagaagctaaagatcaccagaagctctagttcatcaggagatgcaagacttaaa-gtttcaaaggctgttcaatggatttaatctcgtc 18121122  T
Q  216 taagcattgc 225  Q
    ||||||||||    
T  18121123 taagcattgc 18121132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 20382198 - 20382417
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||| || ||| ||||||||| |||| ||| ||||||  |||| ||||||||| |    
T  20382198 acaaaagagagtaatggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcctgaagtcaaa-gtgctcctgaagtgatgacgtcatcaaa 20382296  T
Q  119 agcaagttcatcagaagcatctcatcagaagc---------------tttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaa 203  Q
    ||||||||||||||||||||||||||||||||               |  ||||||||||||||| |||| |||||| |||||||||||||||||||| |    
T  20382297 agcaagttcatcagaagcatctcatcagaagcaagatcaccagaagctgaagttcatcaggagatgcaagtcttaaa-gcttcaaaggctgttcaatgga 20382395  T
Q  204 tttaatctcgtctaagcattgc 225  Q
    || ||||||||| | |||||||    
T  20382396 ttcaatctcgtccatgcattgc 20382417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 225
Target Start/End: Complemental strand, 18680132 - 18679943
Alignment:
Q  34 ggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcaga 133  Q
    |||||||||||||||||||||| ||||||||||| || ||| ||||||||| |||| ||| ||||||  |||| ||||||||||||||||||||||||||    
T  18680132 ggaatcaacaaaaaggaagctttaagcatctgaagag-agtgctcctgaagtcaaa-gtgctcctgaagtgatgacgtcatcagaagcaagttcatcaga 18680035  T
Q  134 agcatc-tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||   |||  |||||||| | |||||||| |||| ||||||||| | ||||||||||  ||||| || ||| |||||||||||||||||||    
T  18680034 agcaagatcactagaagcttcatttcatcagaagatgcaagacttaga-gcttcaaaggtagttcagtggattcaatctcgtctaagcattgc 18679943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 17441625 - 17441831
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| ||||||||| |||||||||||| |||| |||||| || ||| ||||||||| | |||||| ||||||  |||| |||||||||||    
T  17441625 acaaaagagagcaaaggaatcaacgaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagtc-aaagtgctcctgaagtgatgacgtcatcaga 17441723  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||| |  | |||||||||   |  ||| |||||||| |||||||||||||||| |||||||| ||||||| ||||| ||||||||| | |||||||| ||    
T  17441724 agc-atctaatcagaagctgaagatcaccagaagctctagttcatcaggagatgcaagactt-aaagctttaaaggttgttcaatggacttaatctcctc 17441821  T
Q  216 taagcattgc 225  Q
    ||||||||||    
T  17441822 taagcattgc 17441831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 17914806 - 17914677
Alignment:
Q  21 aaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaag 120  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| || ||| ||||| ||| | |||||| || |||  | || ||||||| |||||    
T  17914806 aaaagagagcaaaggaatcaacagaaaggaagcttgaagcatctgaagagaagtgctcctaaagtc-aaagtgctcttgaagtaatgacgtcattagaag 17914708  T
Q  121 caagttcatcagaagcatctcatcagaagct 151  Q
    |||||||||||||||||||||||||||||||    
T  17914707 caagttcatcagaagcatctcatcagaagct 17914677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 25 - 225
Target Start/End: Complemental strand, 33083199 - 33082985
Alignment:
Q  25 gagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaag 124  Q
    |||||| |||||||||||||||| ||||||| |||| |||||| || ||| ||| ||||| |||||||| || |||  |||| ||||||| |||| ||||    
T  33083199 gagagctatggaatcaacaaaaaagaagcttaaagcgtctgaagagaagtgctcttgaagtcaaaagtgctcttgaagtgatgacgtcattagaaacaag 33083100  T
Q  125 ttcatcagaagcatctcatcagaagc---------------tttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaat 209  Q
    |||||| |||||| ||||||||||||               |  ||||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||    
T  33083099 ttcatctgaagcaactcatcagaagcaagatcaccagaagctgaagttcatcaggagatgcaagacttaaa-gcttcaaaggttgttcaatggatttaat 33083001  T
Q  210 ctcgtctaagcattgc 225  Q
    ||||||||||||||||    
T  33083000 ctcgtctaagcattgc 33082985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 17267820 - 17267690
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| || |||   ||||||| | |||||| | ||||  |||| |||| || |||    
T  17267820 acaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgtgcctgaagtc-aaagtgcttctgaagtgatgacgttattaga 17267722  T
Q  119 agcaagttcatcagaagcatctcatcagaagc 150  Q
    ||||||||||||| ||||||||||||||||||    
T  17267721 agcaagttcatcaaaagcatctcatcagaagc 17267690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 223
Target Start/End: Original strand, 20255370 - 20255586
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| ||||||||||||||||||| || |||| |||||| || | | ||||||||| |||| ||| ||||||  |||| ||||||||| |    
T  20255370 acaaaagagagcaaaggaatcaacaaaaaggaagtttaaagcgtctgaagagaactgctcctgaagtcaaa-gtgctcctgaagtgatgacgtcatcata 20255468  T
Q  119 agcaagttcatcagaagcatctcatcagaagctttagttcatcaggagata--------------caagacttaaaagcttcaaaggctgttcaatgaat 204  Q
    || |||||||||||||| |||||||||||||||  || ||| ||| |||||              |||||||| ||||| ||||||||||||||||| ||    
T  20255469 aggaagttcatcagaagtatctcatcagaagctgaagatcaccagaagataaagctcattagatgcaagactt-aaagcgtcaaaggctgttcaatggat 20255567  T
Q  205 ttaatctcgtctaagcatt 223  Q
    |||||||||||||||||||    
T  20255568 ttaatctcgtctaagcatt 20255586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 19943586 - 19943455
Alignment:
Q  19 acaaaagagagcaatggaatcaac-aaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcag 117  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||||||||| || ||| |||||||||   | |||| ||||||  |||| ||| |||| |    
T  19943586 acaaaagagagtaatggaatcaaccaaaaaagaagcttgaagcatctgaagagaagtgctcctgaagt--atagtgctcctgaagtgatgacgacatcgg 19943489  T
Q  118 aagcaagttcatcagaagcatctcatcagaagct 151  Q
    ||||||||||||||||||||||||||||||||||    
T  19943488 aagcaagttcatcagaagcatctcatcagaagct 19943455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 17525532 - 17525662
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgata-acgtcatcag 117  Q
    |||||||||||||| | |||||||||||| |||| |||||||||||||| || ||| |||||||||||||  ||| ||||||  ||||  || |||||||    
T  17525532 acaaaagagagcaaagaaatcaacaaaaatgaagattgaagcatctgaaaagaagtgctcctgaagacaa--gtgctcctgaagtgattgacatcatcag 17525629  T
Q  118 aagcaagttcatcagaagcatctcatcagaagc 150  Q
    |||||||||| ||||||||||||||||||||||    
T  17525630 aagcaagttcgtcagaagcatctcatcagaagc 17525662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 113 - 225
Target Start/End: Complemental strand, 21933125 - 21933011
Alignment:
Q  113 atcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaat 209  Q
    ||||||||||||||||||||||||   |  ||| |||||||| || ||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||    
T  21933125 atcagaagcaagttcatcagaagctgaaaatcaccagaagctctatttcatcaggagatgcaagacttaaa-gcttcaaaggttgttcaatggatttaat 21933027  T
Q  210 ctcgtctaagcattgc 225  Q
    ||||||||||||||||    
T  21933026 ctcgtctaagcattgc 21933011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 24646686 - 24646466
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||| | |||||||||||||||||||||||||||||||||||  | || ||| |||||||||   | |||| | ||||  |||| |||||||||||    
T  24646686 acaaaagataccaatggaatcaacaaaaaggaagcttgaagcatctagagagaagtgctcctgaagt--atagtgcttctgaagtgatgacgtcatcaga 24646589  T
Q  119 agcaagttcatcagaagcatctcatcagaagctt-----------------tagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatg 201  Q
    |||||||||||||||||||||| ||||||||||                  |||||||||| ||||| ||||| ||||| |||||||||| ||||||||     
T  24646588 agcaagttcatcagaagcatcttatcagaagctgaagatcaccagaagctctagttcatcaagagatgcaagagttaaa-gcttcaaaggttgttcaatt 24646490  T
Q  202 aatttaatctcgtctaagcattgc 225  Q
     |||||||||||||||||||||||    
T  24646489 gatttaatctcgtctaagcattgc 24646466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 225
Target Start/End: Original strand, 12757662 - 12757786
Alignment:
Q  103 tgataacgtcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaa 199  Q
    |||| ||||||||||||||||||| |||||||||   |  ||| ||| |||| |||||||||||||||| |||||||||||| ||| ||||| |||||||    
T  12757662 tgatgacgtcatcagaagcaagttgatcagaagctgaagatcaccagtagctctagttcatcaggagatgcaagacttaaaa-ctttaaaggatgttcaa 12757760  T
Q  200 tgaatttaatctcgtctaagcattgc 225  Q
    || |||||||||||||||||||||||    
T  12757761 tggatttaatctcgtctaagcattgc 12757786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 16207514 - 16207434
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||    
T  16207514 cagaagctctagttcatcaggagatgcaagacttaaa-gcttcaaacgctgttcaatggatttaatctcgtctaagcattgc 16207434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 602537 - 602743
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | ||||||||||||||||||| ||||||| ||| || || ||   | |||||| | |  ||| ||||||  |||| |||||||||||    
T  602537 acaaaagagagctaaggaatcaacaaaaaggaagtttgaagcgtctaaagagaagcgttgctgaagtcta--gtgctcctgaagtgatgacgtcatcaga 602634  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||||||||||| ||||   |  |||  |||||||  |||||||||||| || |||||||||||| ||||||||| |||||| || ||| |||||||||    
T  602635 agcaagttcatcaaaagctaaagatcacaagaagctaaagttcatcaggaaatgcaagacttaaaa-cttcaaaggttgttcattggattcaatctcgtc 602733  T
Q  216 taagcattgc 225  Q
    ||||||||||    
T  602734 taagcattgc 602743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 22745695 - 22745616
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattg 224  Q
    |||||||| |||||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||    
T  22745695 cagaagctctagttcatcaggagatgcaagacttaaa-gcttcaaaggttgttcaatggatttaatctcgtctaagcattg 22745616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 18321102 - 18321182
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||  ||||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||    
T  18321102 cagaagctgaagttcatcaggagatgcaagacttaaa-gcttcaaaggttgttcaatggatttaatctcgtctaagcattgc 18321182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 17702075 - 17701873
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctga-gctgataacgtcatcag 117  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||| || ||| || |||||| ||||  || |||||| ||    ||  |||||||    
T  17702075 acaaaagagagttatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgcttctgaagtcaaa--tgctcctgaagc----aagttcatcag 17701982  T
Q  118 aagcaagttcatcagaagcatctcatca---gaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgt 214  Q
    |||||  | | |||||||||  | ||||   ||||||  |||||||||| ||||   ||||||||| |||||||||| ||||||||||||||||||||||    
T  17701981 aagcacct-cttcagaagcagatgatcaccagaagctgaagttcatcagaagatgagagacttaaa-gcttcaaaggttgttcaatgaatttaatctcgt 17701884  T
Q  215 ctaagcattgc 225  Q
    |||||||||||    
T  17701883 ctaagcattgc 17701873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 19707851 - 19707722
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||| ||| ||||||||||||||||||||||||||||||| ||||||| |  ||| |||||||||    ||||| ||||||  |||| || ||||||||    
T  19707851 acaaatgagggcaatggaatcaacaaaaaggaagcttgaagaatctgaagaaaagtgctcctgaag--ttaagtgctcctgaagtgatgacatcatcaga 19707754  T
Q  119 agcaagttcatcagaagcatctcatcagaagc 150  Q
    ||||||||||| ||||||| ||||| ||||||    
T  19707753 agcaagttcattagaagcacctcattagaagc 19707722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 225
Target Start/End: Complemental strand, 39693881 - 39693663
Alignment:
Q  22 aaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagc 121  Q
    |||||||||||  ||||||||||||| ||||||| ||||||| ||| || ||| || |||||| |||| |||  |||||  |||| |||||||||||| |    
T  39693881 aaagagagcaaatgaatcaacaaaaaagaagcttaaagcatccgaagagaagtgcttctgaagtcaaa-gtgcacctgaagtgatgacgtcatcagaaac 39693783  T
Q  122 aagttcatcagaagcatctcatcagaagc-----------------tttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaat 204  Q
    |||||||||| |||||| |||||||||||                 | ||| |||||||||||| |||||||| ||||||||||||| ||||||||| ||    
T  39693782 aagttcatcaaaagcatgtcatcagaagctgaagatcaccagaagttgtagctcatcaggagatgcaagactt-aaagcttcaaaggttgttcaatggat 39693684  T
Q  205 ttaatctcgtctaagcattgc 225  Q
    | |||||||||||||||||||    
T  39693683 tcaatctcgtctaagcattgc 39693663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 225
Target Start/End: Original strand, 23185134 - 23185249
Alignment:
Q  110 gtcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaattt 206  Q
    |||||||||||||||||||||||||||   |  ||| ||||||||  ||||||||||||||| ||| |    ||||||||||||| ||||||||| ||||    
T  23185134 gtcatcagaagcaagttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacat---aaagcttcaaaggttgttcaatggattt 23185230  T
Q  207 aatctcgtctaagcattgc 225  Q
    |||||||||||||||||||    
T  23185231 aatctcgtctaagcattgc 23185249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 19943435 - 19943364
Alignment:
Q  154 agttcatcaggagatacaagacttaaaagcttcaaa-ggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||||||||| ||||||||||| |||||||| |||| ||||||| |||||||||||||||||||||||    
T  19943435 agttcatcaggagatgcaagacttaaa-gcttcaaaaggctattcaatggatttaatctcgtctaagcattgc 19943364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 23263550 - 23263628
Alignment:
Q  140 tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    ||||||||||||  ||||||||||||||| ||| |||||| | ||||||||| ||||||||  ||||||||||||||||    
T  23263550 tcatcagaagctgaagttcatcaggagatgcaaaacttaagaacttcaaaggttgttcaatagatttaatctcgtctaa 23263628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 30421405 - 30421451
Alignment:
Q  179 aaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  30421405 aaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgc 30421451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 18320993 - 18321058
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    |||||||| ||| |||||||||||||||| ||||||||||||||||||| || ||| |||||||||    
T  18320993 acaaaagatagctatggaatcaacaaaaaagaagcttgaagcatctgaagagaagtgctcctgaag 18321058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 23263438 - 23263545
Alignment:
Q  44 aaaaggaagcttgaag--catctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctc 141  Q
    |||||||||||| |||  | |||||| || ||| |||||||||  ||||| | ||||||  |||| |||||||||||||||||||||||||||||| |||    
T  23263438 aaaaggaagcttaaagtgcttctgaagagaagtgctcctgaagt-aaaagcgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcacctc 23263536  T
Q  142 atcagaagc 150  Q
    |||||||||    
T  23263537 atcagaagc 23263545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 22745753 - 22745705
Alignment:
Q  103 tgataacgtcatcagaagcaagttcatcagaagcatctcatcagaagct 151  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  22745753 tgatgacgtcgtcagaagcaagttcatcagaagcatctcatcagaagct 22745705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 16189348 - 16189283
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||||| || ||| ||| |||||    
T  16189348 acaaaagagagcaaatgaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcttgaag 16189283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 16207604 - 16207556
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  16207604 acaaaagagagcaaatgaatcaacaaaaaggaatcttgaagcatctgaa 16207556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 22461432 - 22461480
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    |||||||||||||||||||||||||| ||||||||||||| | ||||||    
T  22461432 acaaaagagagcaatggaatcaacaagaaggaagcttgaaacgtctgaa 22461480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 16189182 - 16189112
Alignment:
Q  154 agttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||| ||||||| ||||||||||| |||||||||| |||| |||| ||||||||||||| || ||||||    
T  16189182 agttcattaggagatgcaagacttaaa-gcttcaaaggttgtttaatggatttaatctcgtccaaccattgc 16189112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 17797745 - 17797653
Alignment:
Q  43 aaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    ||||||||||||| ||||||||||| |  | | |||||||||||||| ||| ||||||  || | |||||||||||||||| |||||||||||||    
T  17797745 aaaaaggaagcttaaagcatctgaaaaa-actgctcctgaagacaaa-gtgctcctgaaatggtgacgtcatcagaagcaaattcatcagaagca 17797653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 18730786 - 18730909
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagt 125  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |  |||  |  ||||| |||  ||  || |||  |||| ||||||||||||||||||    
T  18730786 agagcaatggaatcaacaaaaagaaagcttgaagcgtatgaagaaaagtgattatgaagtcaa--gttctcatgaaatgatgacgtcatcagaagcaagt 18730883  T
Q  126 tcatcagaagcatctcatcagaagct 151  Q
    | ||||||||||  ||||||||||||    
T  18730884 tgatcagaagcacttcatcagaagct 18730909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 21933250 - 21933180
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaa 89  Q
    |||| ||||||||| |||||||||||||||||||||| |||| |||||| || | | ||||||||| ||||    
T  21933250 acaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaactgctcctgaagtcaaa 21933180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 168
Target Start/End: Original strand, 13430511 - 13430605
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagat 168  Q
    |||||||||||||| ||| ||||||  | || |||||||||||||||||||||||||||||    | ||| ||||||||  |||||||||||||||    
T  13430511 ctcctgaagacaaa-gtgctcctgaagtaatgacgtcatcagaagcaagttcatcagaagctgtgtatcaccagaagctacagttcatcaggagat 13430605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 17525680 - 17525748
Alignment:
Q  153 tagttcatcaggagatacaagacttaaaagcttc-aaaggctgttcaatgaatttaatctcgtctaagca 221  Q
    |||||||||||||||| |||||||| ||| |||| ||||| ||||||||| ||||||| |||||||||||    
T  17525680 tagttcatcaggagatgcaagactt-aaatcttcaaaaggttgttcaatggatttaatatcgtctaagca 17525748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 18719209 - 18719129
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||| ||||| |||| |||| ||||||||| | ||||||||||||||||| || ||| ||||||||  |||||||||    
T  18719209 cagaagcttaagttcttcagaagatgcaagacttaga-gcttcaaaggctgttcagtggattcaatctcgttcaagcattgc 18719129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 136
Target Start/End: Complemental strand, 18719300 - 18719203
Alignment:
Q  34 ggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcaga 133  Q
    |||||||||||||||||||||| ||||||||||| || ||| ||||||||| ||||     | ||||  |||| ||||||||||||||||| ||| ||||    
T  18719300 ggaatcaacaaaaaggaagctttaagcatctgaagag-agtgctcctgaagtcaaa----gttctgaagtgatgacgtcatcagaagcaagatcaccaga 18719206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 22674069 - 22674009
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||||||| || |||| ||||||  |||| ||||||||||||||||||||||||||||||    
T  22674069 ctcctgaaga-aatagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagca 22674009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 36105501 - 36105441
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||||||||||| ||| ||||||  |||| ||||||||||||||||| ||||||||||||    
T  36105501 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaagcaaggtcatcagaagca 36105441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 40845248 - 40845308
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||||||||||| ||| ||||||  |||| ||||||||||||||||| ||||||||||||    
T  40845248 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaagcaaggtcatcagaagca 40845308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 43640065 - 43640005
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||||||||||| ||| || |||  |||| ||||||||||||||||||||||||||||||    
T  43640065 ctcctgaagacaaa-gtgctcatgaagtgatgacgtcatcagaagcaagttcatcagaagca 43640005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 14989335 - 14989394
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| |||| |  |||| |||||||||||||||||||||||||||||    
T  14989335 ctcctgaagacaaa-gtgctcctaaagtgatgacgtcatcagaagcaagttcatcagaagc 14989394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 17914654 - 17914587
Alignment:
Q  157 tcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||| ||||| | ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||    
T  17914654 tcattaggagttgcaagagttaaa-gcttcaaaagttgttcaatggatttaatctcgtctaagcattgc 17914587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 18151551 - 18151599
Alignment:
Q  88 aaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||| ||||||  |||| |||||||||||||||||||||||||||||    
T  18151551 aaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagc 18151599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 18772977 - 18772929
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||| ||||||||||||||| ||||||||||| |||||||||| ||||    
T  18772977 acaaatgagagcaatggaatctacaaaaaggaaacttgaagcatttgaa 18772929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 21288670 - 21288611
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||| ||||||| | ||||  |||| |||||||||||||||||||||||||||||    
T  21288670 ctcctgaaga-aaaagtgcttctgaagtgatgacgtcatcagaagcaagttcatcagaagc 21288611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 6407992 - 6407934
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaag 135  Q
    |||||||||||||| ||| ||||||  |||| ||||||||| ||||||||||||||||||    
T  6407992 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcaaaagcaagttcatcagaag 6407934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 16189240 - 16189201
Alignment:
Q  111 tcatcagaagcaagttcatcagaagcatctcatcagaagc 150  Q
    ||||||||||||||||||||||||| ||||||| ||||||    
T  16189240 tcatcagaagcaagttcatcagaagtatctcattagaagc 16189201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 17267671 - 17267602
Alignment:
Q  154 agttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||| ||||| |||||||| ||||||||||||| |||||||||  || ||||||||| |||||||||    
T  17267671 agttcatcaagagatgcaagactt-aaagcttcaaaggttgttcaatg-gttcaatctcgtccaagcattgc 17267602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 2811168 - 2811037
Alignment:
Q  21 aaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaag 120  Q
    |||| ||||||| | ||||||||||| |||||||| ||||||||||| || |||  || ||||||| | || | ||||||  |||| |||||||||||||    
T  2811168 aaaaaagagcaaagaaatcaacaaaa-ggaagcttaaagcatctgaagagaagtgttcatgaagac-atagcgctcctgaagtgatgacgtcatcagaag 2811071  T
Q  121 c--aagttcatcagaagca-tctcatcagaagct 151  Q
    |  ||| ||||||||||||  |||||||||||||    
T  2811070 ctgaagctcatcagaagcagcctcatcagaagct 2811037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 18685221 - 18685255
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagc 60  Q
    ||||||||||||||||||||||| |||||||||||    
T  18685221 agagcaatggaatcaacaaaaagaaagcttgaagc 18685255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 18722441 - 18722564
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagt 125  Q
    ||||||||||||||||||||||| ||||||||||| | |||| |  |||  |  ||||| |||  ||  || |||  |||| ||||||| ||||||||||    
T  18722441 agagcaatggaatcaacaaaaagaaagcttgaagcgtatgaagaaaagtgattatgaagtcaa--gttctcatgaaatgatcacgtcattagaagcaagt 18722538  T
Q  126 tcatcagaagcatctcatcagaagct 151  Q
    | ||||||||||  ||||||||||||    
T  18722539 tgatcagaagcacttcatcagaagct 18722564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 19956153 - 19956256
Alignment:
Q  19 acaaaagagagcaat-ggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcag 117  Q
    ||||| ||||||||| ||||||||||| |||||| |||||||| |||||| |  || | | ||||||||  ||||| ||||||  |||| ||||||||||    
T  19956153 acaaatgagagcaattggaatcaacaagaaggaaacttgaagcgtctgaaaaaaagatgttctgaagac--aagtgctcctgaagtgatgacgtcatcag 19956250  T
Q  118 aagcaa 123  Q
    ||||||    
T  19956251 aagcaa 19956256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 30421244 - 30421314
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaa 89  Q
    |||| ||||||||| ||||| |||||||||||||||| |||| |||||| |  | | ||||||||||||||    
T  30421244 acaatagagagcaaaggaattaacaaaaaggaagcttaaagcgtctgaacaaaactgctcctgaagacaaa 30421314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 136
Target Start/End: Complemental strand, 1745401 - 1745368
Alignment:
Q  103 tgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||| |||||||||||||||||||||||||||||    
T  1745401 tgatgacgtcatcagaagcaagttcatcagaagc 1745368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 21541338 - 21541289
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaag-gaagcttgaagcatctgaa 67  Q
    |||||||||||||| ||||||||||||||| ||||| | |||||||||||    
T  21541338 acaaaagagagcaaaggaatcaacaaaaagagaagcctaaagcatctgaa 21541289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 23772716 - 23772679
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttg 56  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  23772716 acaaatgagagcaatggaatctacaaaaaggaagcttg 23772679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 24551580 - 24551521
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| ||||||  |||| |||||||||||||| ||||||||| ||||    
T  24551580 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaagcgagttcatcataagc 24551521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 14969670 - 14969462
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||| ||||||||  ||||||||||||||||| ||||||||||||||| || |   ||||| |||||||||||| ||||||  |||| ||||||||| |    
T  14969670 acaaacgagagcaaatgaatcaacaaaaaggaatcttgaagcatctgaagagaatcgctccttaagacaaaagtgctcctgaagtgatgacgtcatcata 14969571  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||||||||||||| ||   |  ||| |||||||| |||||||| |||| || |||||||| ||||||||||||| ||||||||| |||||||||||||    
T  14969570 agcaagttcatcagatgctgaagatcaccagaagctctagttcatgaggatatgcaagactt-aaagcttcaaaggttgttcaatggatttaatctcgtc 14969472  T
Q  216 taagcattgc 225  Q
    ||||||||||    
T  14969471 taagcattgc 14969462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 52920761 - 52920540
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||| || ||| |||||||||  ||||||| ||||||  |||| |||||||||||    
T  52920761 acaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagt-aaaagtgctcctgaagtgatgacgtcatcaga 52920663  T
Q  119 agcaagttcatcagaagcatctcatcaga-----------------agctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatg 201  Q
    |||||||||||||||||||||||||||||                 ||||  ||||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  52920662 agcaagttcatcagaagcatctcatcagaagctgaagatcaccagaagctgaagttcatcaggagatgcaagactt-aaagtttcaaaggctgctcaatg 52920564  T
Q  202 aatttaatctcgtctaagcattgc 225  Q
     |||||||||||||||||||||||    
T  52920563 gatttaatctcgtctaagcattgc 52920540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 15903555 - 15903424
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||| | |||||| | ||||  |||| |||||||||||    
T  15903555 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctccttaagtc-aaagtgcttctgaagtgatgacgtcatcaga 15903457  T
Q  119 agcaagttcatcagaagcatctcatcagaagct 151  Q
    |||||||||||||||| ||||||||||||||||    
T  15903456 agcaagttcatcagaaccatctcatcagaagct 15903424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 35 - 225
Target Start/End: Complemental strand, 2561514 - 2561323
Alignment:
Q  35 gaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaa 134  Q
    ||||||||||||||||||||| |||| |||||| || | | |||||||||||||| ||| || |||  || | || ||||||||||||||||||||||||    
T  2561514 gaatcaacaaaaaggaagcttaaagcgtctgaagagaactgctcctgaagacaaa-gtgctcttgaagtggtgacatcatcagaagcaagttcatcagaa 2561416  T
Q  135 gcatc---tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||      ||| |||||||| |||||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||    
T  2561415 gctgagaatcaccagaagctctagttcatcaggagatgcaagacttaaa-gcttcaaaggttgttcaatggatttaatctcgtctaagcattgc 2561323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 14392809 - 14393028
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | |||||||||| ||||||||||||||||||||||| || ||| |||||||||   |||||| ||||||  |||| |||||||||||    
T  14392809 acaaaagagagctaaggaatcaacagaaaggaagcttgaagcatctgaagagaagtgctcctgaag-ttaaagtgctcctgaagtgatgacgtcatcaga 14392907  T
Q  119 agcaagttcatcagaagcatctcatc---------------agaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaa 203  Q
    |||||| |||||| ||||||||||||               |||||||  ||||||| |||||||||||||||| |||| |||||||| ||||||||| |    
T  14392908 agcaagatcatcataagcatctcatcaaaagcaagatcactagaagctgaagttcattaggagatacaagactt-aaagtttcaaaggttgttcaatgga 14393006  T
Q  204 tttaatctcgtctaagcattgc 225  Q
    ||||||||||||||||||||||    
T  14393007 tttaatctcgtctaagcattgc 14393028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 41495330 - 41495134
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||| || ||| || |||||| | |||||| || |||  |||| | |||||||||    
T  41495330 acaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgcttctgaagtc-aaagtgctcatgaagtgatgatgtcatcaga 41495232  T
Q  119 agcaagttcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    |||||||||||||||||||||||||||||| ||  || ||| ||| ||         ||  |||||||||||||||||||||| ||||||||||||||||    
T  41495231 agcaagttcatcagaagcatctcatcagaaactgaagatcaccagaag---------ttgtaagcttcaaaggctgttcaatggatttaatctcgtctaa 41495141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 221
Target Start/End: Original strand, 12962919 - 12963105
Alignment:
Q  34 ggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcaga 133  Q
    ||||||||||||||||||||||||||| |||||| || ||| ||  ||||| |||| ||| || |||  |||| ||||||||||||||||||||||||||    
T  12962919 ggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctattgaagtcaaa-gtgctcttgaagtgatgacgtcatcagaagcaagttcatcaga 12963017  T
Q  134 agc-atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagca 221  Q
    ||| |  ||| |||||| | |||||||||||||||| |||||||| |||||||||| || ||||||| | ||||||||| |||||||||    
T  12963018 agcaagatcaccagaagttgtagttcatcaggagatgcaagactt-aaagcttcaagggttgttcaagggatttaatcttgtctaagca 12963105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 13948692 - 13948561
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||| || ||| ||| ||||| ||||| || || |||  |||| |||||||||||    
T  13948692 acaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcttgaagtcaaaa-tgctcatgaagtgatgacgtcatcaga 13948594  T
Q  119 agcaagttcatcagaagcatctcatcagaagct 151  Q
    |||||||| ||||||||||||||||||||||||    
T  13948593 agcaagtttatcagaagcatctcatcagaagct 13948561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 6091088 - 6090867
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||| || ||| |||||||||  ||| ||| || |||  | || |||||||||||    
T  6091088 acaaaagagagcaatgaaatcaacaaaaatgaagcttgaagcatctgaagagaagtgctcctgaagttaaa-gtgctcatgaagttatgacgtcatcaga 6090990  T
Q  119 agcaagttcatcagaagcatctcatcagaagc-----------------tttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatg 201  Q
    ||||||||||||| ||||||||||||||||||                 |  ||||||||||||||| |||||||||||| ||||||||| || ||||||    
T  6090989 agcaagttcatcaaaagcatctcatcagaagcagaagatcaccagaagctgaagttcatcaggagatgcaagacttaaaa-cttcaaaggttgctcaatg 6090891  T
Q  202 aatttaatctcgtctaagcattgc 225  Q
     |||||||||||||||||||||||    
T  6090890 gatttaatctcgtctaagcattgc 6090867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 22803904 - 22804046
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||| || ||| |||||||||    ||||| |||| |  |||| ||||||||| |    
T  22803904 acaaaagagagcaatggaatcaacaaaaaggaagcttgaaacatttgaagagaagtgctcctgaag--ttaagtgctcctaaagtgatgacgtcatcaaa 22804001  T
Q  119 agcaagttcatcagaagcatctcatcagaagctttagttcatcag 163  Q
    ||||||||| |||||||||||||||||||||||  ||||||||||    
T  22804002 agcaagttcctcagaagcatctcatcagaagctgaagttcatcag 22804046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 31303745 - 31303611
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacg---tcatc 115  Q
    ||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||| ||||||||| | |||||| ||||||  |||| |||   |||||    
T  31303745 acaaaagagagcaaaagaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcctgaagtc-aaagtgctcctgaagtgatgacgtcatcatc 31303647  T
Q  116 agaagcaagttcatcagaagcatctcatcagaagct 151  Q
    ||||||||||||||||||||||||||||||||||||    
T  31303646 agaagcaagttcatcagaagcatctcatcagaagct 31303611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 16199615 - 16199744
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||| |||||||||||||||||||| || ||||||||||||||||||| |  ||| ||||||||| |||  ||| |||||| ||||| |||||||||||    
T  16199615 acaaatgagagcaatggaatcaacaagaaagaagcttgaagcatctgaagaaaagtgctcctgaagtcaa--gtgctcctgaactgatgacgtcatcaga 16199712  T
Q  119 agcaagttcatcagaagcatctcatcagaagc 150  Q
    ||||||||||| ||||||| ||||||||||||    
T  16199713 agcaagttcataagaagcacctcatcagaagc 16199744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 20646511 - 20646380
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| ||||||||||||| |||||||| |||| | |||| || ||| ||||||||| |||| ||| || |||  |||| |||||||||||    
T  20646511 acaaaagagagcaaaggaatcaacaaaatggaagcttaaagcgtttgaagagaagtgctcctgaagtcaaa-gtgttcatgaagtgatgacgtcatcaga 20646413  T
Q  119 agcaagttcatcagaagcatctcatcagaagct 151  Q
    |||||||||||||||||||||||||||||||||    
T  20646412 agcaagttcatcagaagcatctcatcagaagct 20646380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 13824390 - 13824265
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaag--catctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatca 116  Q
    |||||||||||||||||||||||||||||||||||||||||  |  ||||| || ||| |||||||||  ||||||| ||||||  |||| |||||||||    
T  13824390 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagtgctcctgaagagaagtgctcctgaagt-aaaagtgctcctgaagtgatgacgtcatca 13824292  T
Q  117 gaagcaagttcatcagaagcatctcat 143  Q
    |||||||||||||||||||||||||||    
T  13824291 gaagcaagttcatcagaagcatctcat 13824265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 37467658 - 37467541
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |  ||| ||||||||| | |||| | ||||||  |||| |||||||||||    
T  37467658 acaaaagagaacaatggaatcaacaaaaaggaagcttgaagcatctgaagataagtgctcctgaagtc-aaagagctcctgaagtgatgacgtcatcaga 37467560  T
Q  119 agcaagttcatcagaagca 137  Q
    |||||| ||| ||||||||    
T  37467559 agcaagatcaccagaagca 37467541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 26 - 225
Target Start/End: Complemental strand, 11223896 - 11223698
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagt 125  Q
    ||||||| ||||||||||||||||||| || ||||||||||| || | | ||||||||||| |||||| ||||||  || | ||||||||||||||||||    
T  11223896 agagcaaaggaatcaacaaaaaggaagtttaaagcatctgaagagaactgctcctgaagac-aaagtgctcctgaagtggtgacgtcatcagaagcaagt 11223798  T
Q  126 tcatcagaa---gcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcat 222  Q
    |||||||||   | |  ||| |||||||   ||||||||||||||||||  ||||   ||||||||| |||||||||||  || ||||||||||| ||||    
T  11223797 tcatcagaatctgaaaatcaccagaagcagcagttcatcaggagataca--actt-tgagcttcaaaagctgttcaatgggttcaatctcgtctatgcat 11223701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 218
Target Start/End: Original strand, 25398098 - 25398290
Alignment:
Q  40 aacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatc 139  Q
    ||||||||| ||||||||||||| |||| || ||  |||||||||| | ||||| ||||||  |||  ||||||||||||||||||||||||||||||||    
T  25398098 aacaaaaagaaagcttgaagcatttgaagagaagcgctcctgaagatacaagtgctcctgaagtgacgacgtcatcagaagcaagttcatcagaagcatc 25398197  T
Q  140 tcatcagaagctttagttcatcaggag---------------atacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    |||| |||||||  || ||||||| ||               || ||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  25398198 tcattagaagctgaagatcatcagaagttgtctcatcataagatgcaagacttaaa-gcttcaaaggttgttcaatgaatttaatctcgtctaa 25398290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 111 - 225
Target Start/End: Complemental strand, 28582357 - 28582241
Alignment:
Q  111 tcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaattta 207  Q
    ||||||||||||||| ||| ||||||   |  ||| |||||||| || ||||||||||||| ||||||||||| |||||||||||||||||||| |||||    
T  28582357 tcatcagaagcaagtacattagaagctgaaaatcaccagaagctctatttcatcaggagatgcaagacttaaa-gcttcaaaggctgttcaatggattta 28582259  T
Q  208 atctcgtctaagcattgc 225  Q
    |||||||||| |||||||    
T  28582258 atctcgtctatgcattgc 28582241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 49642582 - 49642786
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagaca-aaagtgatcctgagctgataacgtcatcag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||  |  | |  |||   |||    || ||||||||    
T  49642582 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtgatgacgcaatcagaagc----aaggtcatcag 49642677  T
Q  118 aagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgt 214  Q
    |||| |  |||| ||||||   |  ||| |||||| | |||||||||||||||| |||||||| ||||||||||||| ||||||||  ||||||||||||    
T  49642678 aagc-atctcattagaagctgaagatcaccagaagttgtagttcatcaggagatgcaagactt-aaagcttcaaaggttgttcaatagatttaatctcgt 49642775  T
Q  215 ctaagcattgc 225  Q
    |||||||||||    
T  49642776 ctaagcattgc 49642786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 17238757 - 17238946
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | |||||||||||||||||||||| |||| |||||| || ||| ||||||||| |  ||||| | ||||  |||| |||||||||||    
T  17238757 acaaaagagagctaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagtc--aagtgcttctgaagtgatgacgtcatcaga 17238854  T
Q  119 agcaagttcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    |||||| ||| ||||||      || |        ||| ||| ||||||| |||||||| |||||||||||||||| |||||| ||||||||||||||||    
T  17238855 agcaagatcaccagaag------atga--------agtgcataaggagatgcaagactt-aaagcttcaaaggctgatcaatggatttaatctcgtctaa 17238939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 47405254 - 47405445
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||| ||||||||| |||||||||||||||||||||| |||| |||||| |  | | |||||||||||||||||| ||||||  | || |||||||||||    
T  47405254 acaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaaagtgctcctgaagtaatgacgtcatcaga 47405353  T
Q  119 agcaagttcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    |||       | | ||     ||| ||||||||  ||||||||| ||||| ||| |    ||||||||||||||||||||||| ||||||||||||||||    
T  47405354 agc-------tgaaaa-----tcaccagaagctgcagttcatcacgagatgcaaca---taaagcttcaaaggctgttcaatggatttaatctcgtctaa 47405438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 29951242 - 29951372
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | | | |||||||||||||||||||||||||||| | |  ||| || |||||| |  ||||| ||||||  |||| ||||| |||||    
T  29951242 acaaaagagagctaagaagtcaacaaaaaggaagcttgaagcatctgtagaatagtgctactgaagtc--aagtgctcctgaagtgatgacgtcttcaga 29951339  T
Q  119 agcaagttcatcagaagcatctcatcagaagct 151  Q
    ||||||||||||||||||| || ||||||||||    
T  29951340 agcaagttcatcagaagcaccttatcagaagct 29951372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 30000396 - 30000526
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | | | |||||||||||||||||||||||||||| | |  ||| || |||||| |  ||||| ||||||  |||| ||||| |||||    
T  30000396 acaaaagagagctaagaagtcaacaaaaaggaagcttgaagcatctgtagaatagtgctactgaagtc--aagtgctcctgaagtgatgacgtcttcaga 30000493  T
Q  119 agcaagttcatcagaagcatctcatcagaagct 151  Q
    ||||||||||||||||||| || ||||||||||    
T  30000494 agcaagttcatcagaagcaccttatcagaagct 30000526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 38177583 - 38177663
Alignment:
Q  140 tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagca 221  Q
    |||||||||||| ||||| || ||||||| ||||||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  38177583 tcatcagaagctctagtttattaggagatgcaagacttaaa-gcttcaaaggttgttcaatgaatttaatctcgtctgagca 38177663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 225
Target Start/End: Original strand, 18142692 - 18142776
Alignment:
Q  140 tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||||||| |||||||||||||||| ||||| || ||||||||||||||| ||||||| ||| |||||||| | ||||||||    
T  18142692 tcatcagaagctctagttcatcaggagatgcaaga-tttaaagcttcaaaggctattcaatggattcaatctcgtttgagcattgc 18142776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 12726184 - 12726254
Alignment:
Q  154 agttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||||| ||| |||||||||||||| ||||    
T  12726184 agttcatcaggagattcaagacttaaa-gcttcaaaggctattcaatggattcaatctcgtctaagctttgc 12726254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 225
Target Start/End: Original strand, 18121530 - 18121646
Alignment:
Q  111 tcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaattta 207  Q
    |||||| |||||||||||||| ||||   |  ||| |||||||| |||||||||||||||| ||||| ||||| |||||||||| ||||||||| ||| |    
T  18121530 tcatcaaaagcaagttcatcataagctaaagatcaccagaagctctagttcatcaggagatgcaagatttaaa-gcttcaaaggttgttcaatggattca 18121628  T
Q  208 atctcgtctaagcattgc 225  Q
    ||||||| | ||||||||    
T  18121629 atctcgtttgagcattgc 18121646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 40800055 - 40800009
Alignment:
Q  179 aaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  40800055 aaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgc 40800009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 16032836 - 16032771
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||| |  ||| |||||||||    
T  16032836 acaaaagagagcattggaatcaacaaaaatgaagcttgaagcatctgaagaaaagtgctcctgaag 16032771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 31303585 - 31303521
Alignment:
Q  160 tcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||||  |||||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  31303585 tcaggagatgaaagacttaaa-gctttaaaggttgttcaatgaatttaatctcgtctaagcattgc 31303521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 13948538 - 13948471
Alignment:
Q  157 tcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||||||| ||||||||||| || ||||||| ||||||||  |||||||||||||||||||||||    
T  13948538 tcatcaggagatgcaagacttaaa-gcgtcaaaggatgttcaattgatttaatctcgtctaagcattgc 13948471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 15903399 - 15903336
Alignment:
Q  159 atcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcatt 223  Q
    |||||||||| ||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||    
T  15903399 atcaggagatgcaagacttaaa-gcttcaaacgctgttcaatggattcaatctcgtctaagcatt 15903336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 225
Target Start/End: Original strand, 19888854 - 19888969
Alignment:
Q  111 tcatcagaagcaagttcatcagaagcatc-tcatcagaagctttagttcatcaggagatacaagacttaaaagctt-caaaggctgttcaatgaatttaa 208  Q
    |||||||||||||||||||||||||||   |||  |||||||  ||||||||| ||||| |||||||| |||||||  |||| |||||||||| ||| ||    
T  19888854 tcatcagaagcaagttcatcagaagcaagatcactagaagctaaagttcatcaagagatgcaagactt-aaagcttaaaaagactgttcaatggattcaa 19888952  T
Q  209 tctcgtctaagcattgc 225  Q
    ||||||| |||||||||    
T  19888953 tctcgtccaagcattgc 19888969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 26417494 - 26417542
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  26417494 acaaatgagagcaatggaatcaacaagaaggaagcttgaagcatctgaa 26417542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 20646361 - 20646290
Alignment:
Q  153 tagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattg 224  Q
    |||||||||||||||| |||||||||||   || ||||||||||||||| |||| |||||||| ||||||||    
T  20646361 tagttcatcaggagatgcaagacttaaagctttaaaaggctgttcaatgtatttcatctcgtccaagcattg 20646290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 12388685 - 12388727
Alignment:
Q  25 gagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  12388685 gagagcaatggaatcaacaagaaggaagcttgaagcatctgaa 12388727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 12388729 - 12388791
Alignment:
Q  88 aaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatcagaagc 150  Q
    |||||| ||||||  |||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  12388729 aaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcataagcacctcatcagaagc 12388791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 18121424 - 18121541
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||| |||||||||  ||| ||||||||| ||||||| |||| |||||| || | | ||||||||||| |||||| ||||||  || | || ||||||||    
T  18121424 acaatagagagcaaatgaagcaacaaaaatgaagcttaaagcgtctgaagagaactgctcctgaagac-aaagtgctcctgacgtggtgacatcatcaga 18121522  T
Q  119 agcaagttcatcagaagca 137  Q
    ||||||||||||| |||||    
T  18121523 agcaagttcatcaaaagca 18121541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 49666276 - 49666336
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||||||||||| ||| ||||||  |||| ||||||||||||||||||||||||||||||    
T  49666276 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagca 49666336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 20725448 - 20725400
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||||    
T  20725448 acaaatgagagcaatgaaatcaacaagaaggaagcttgaagcatctgaa 20725400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 16658562 - 16658640
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcatt 223  Q
    |||||| | |||||||||||||||| |||||||| ||| ||||||||| ||||||||  ||| ||||||||| |||||||    
T  16658562 cagaagttgtagttcatcaggagatgcaagacttgaaa-cttcaaaggttgttcaattgattcaatctcgtccaagcatt 16658640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 37467539 - 37467469
Alignment:
Q  153 tagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattg 224  Q
    |||||||||||||||| ||| |||||||  ||||||||  ||||||||| |||||||||| |||||||||||    
T  37467539 tagttcatcaggagatgcaaaacttaaat-cttcaaagcttgttcaatggatttaatctcatctaagcattg 37467469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 40851242 - 40851184
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaag 135  Q
    |||||||||||||| ||| ||||||  |||| ||||||||||||||||||||||||||||    
T  40851242 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaag 40851184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 49553443 - 49553513
Alignment:
Q  154 agttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||||||||| |||||||| |||| ||||||||||||| |||  ||||||  |||||||||||||||    
T  49553443 agttcatcaggagatgcaagactt-aaagtttcaaaggctgtttaatagatttaacatcgtctaagcattgc 49553513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 38177493 - 38177558
Alignment:
Q  21 aaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaat-agcagttctcctgaaga 85  Q
    |||| |||||||  |||||||||||||||||||||||| ||||||||| || ||| ||||||||||    
T  38177493 aaaaaagagcaaatgaatcaacaaaaaggaagcttgaaacatctgaatgagaagtgctcctgaaga 38177558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 49553298 - 49553359
Alignment:
Q  25 gagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa-tagcagttctcctgaaga 85  Q
    ||||||||  |||||||||||||||||||||||||| |||||| ||| ||| ||||||||||    
T  49553298 gagagcaaatgaatcaacaaaaaggaagcttgaagcgtctgaagtagaagtgctcctgaaga 49553359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 50300500 - 50300440
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||||||||||| ||| ||||||  | || ||||||||||||||||||||||||||||||    
T  50300500 ctcctgaagacaaa-gtgctcctgaagtaatgacgtcatcagaagcaagttcatcagaagca 50300440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 13780576 - 13780608
Alignment:
Q  193 tgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||||||||||||||||||||||||||||    
T  13780576 tgttcaatgaatttaatctcgtctaagcattgc 13780608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 13824258 - 13824211
Alignment:
Q  170 caagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    ||||||||||| |||||||||| ||||||||| ||||||||||||||||    
T  13824258 caagacttaaa-gcttcaaaggttgttcaatggatttaatctcgtctaa 13824211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 16658475 - 16658551
Alignment:
Q  45 aaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagc 121  Q
    ||||||||||| |||| |||||| || ||| ||||||||||||||| || || |||  |||| ||||||||||||||    
T  16658475 aaaggaagcttaaagcgtctgaagagaagtgctcctgaagacaaaaatgctcatgaagtgatgacgtcatcagaagc 16658551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 19249216 - 19249264
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||| ||||||| |||||||||||| || |||||||||||||||||||    
T  19249216 acaaatgagagcactggaatcaacaagaatgaagcttgaagcatctgaa 19249264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 20627282 - 20627330
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    |||| ||||||||| |||||||||||||||||||||| |||| ||||||    
T  20627282 acaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaa 20627330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 29951410 - 29951461
Alignment:
Q  172 agacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattg 224  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||    
T  29951410 agacttaaa-gcttcaaaggtttttcaatggatttaatctcgtctaagcattg 29951461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 30000564 - 30000615
Alignment:
Q  172 agacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattg 224  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||    
T  30000564 agacttaaa-gcttcaaaggtttttcaatggatttaatctcgtctaagcattg 30000615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 30054102 - 30054161
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| || |||  |||| |||||||||||||||||||||||||||||    
T  30054102 ctcctgaagacaaa-gtgctcatgaagtgatgacgtcatcagaagcaagttcatcagaagc 30054161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 46796253 - 46796312
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||| | ||| ||||||  |||| |||||||||||||||||||||||||||||    
T  46796253 ctcctgaagacaga-gtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagc 46796312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 47207920 - 47207849
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    ||||||||  ||||||||||||||| ||| |  ||||| ||||||||| ||||||||| ||||||||||||||||    
T  47207920 cagaagctgcagttcatcaggagatgcaaca--taaaa-cttcaaaggttgttcaatggatttaatctcgtctaa 47207849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 47208066 - 47207996
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaa 89  Q
    |||| |||||||||  ||||||||||||||||||||| |||| |||||| |  | | ||||||||||||||    
T  47208066 acaatagagagcaaatgaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaa 47207996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 11908768 - 11908817
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaag-gaagcttgaagcatctgaa 67  Q
    |||||||||||||| ||||||||||||||| ||||| | |||||||||||    
T  11908768 acaaaagagagcaaaggaatcaacaaaaagagaagcctaaagcatctgaa 11908817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 14073040 - 14073003
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttg 56  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  14073040 acaaatgagagcaatggaatctacaaaaaggaagcttg 14073003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 14955740 - 14955680
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||||||||||| ||| ||||||  | || ||||||||||||||||| ||||||||||||    
T  14955740 ctcctgaagacaaa-gtgctcctgaagtaatgacgtcatcagaagcaaggtcatcagaagca 14955680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 21636551 - 21636600
Alignment:
Q  88 aaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||| ||||||  |||| ||||||||||||||||| ||||||||||||    
T  21636551 aaagtgctcctgaagtgatgacgtcatcagaagcaaggtcatcagaagca 21636600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 46349705 - 46349765
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||||||||||| ||| ||||||  || | |||||||||||||| |||||||||||||||    
T  46349705 ctcctgaagacaaa-gtgctcctgaagtggtgacgtcatcagaagcgagttcatcagaagca 46349765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 50300567 - 50300526
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||||| |||||||||||||||||||||| |||| ||||||    
T  50300567 agagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaa 50300526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 33583544 - 33583485
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| ||||||  |||| |||||||||||| ||||||| ||||||||    
T  33583544 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaaacaagttcgtcagaagc 33583485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 33598164 - 33598105
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| ||||||  |||| |||||||||||| ||||||| ||||||||    
T  33598164 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaaacaagttcgtcagaagc 33598105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 40800177 - 40800117
Alignment:
Q  24 agagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    ||||||||| | |||||||||||||||||||| |||| |||||| |  ||| |||||||||    
T  40800177 agagagcaaagaaatcaacaaaaaggaagcttaaagcgtctgaagaaaagtgctcctgaag 40800117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 8046 - 7839
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||| ||||||||| ||||||||||||||| |||||| |||| |||||| |  | | |||||||||||||| ||| ||| ||| || | ||||||| | |    
T  8046 acaatagagagcaaaggaatcaacaaaaagaaagcttaaagcgtctgaagaaaattgctcctgaagacaaa-gtgctcccgaggtggtgacgtcattaaa 7948  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||||||||||||||||   |  ||| |||||||| || ||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||    
T  7947 agcaagttcatcagaagctgaagatcaccagaagctctatttcatcaggagatgcaagacttaaa-gcttcaaaggctgttcaatggatttaatctcgtc 7849  T
Q  216 taagcattgc 225  Q
    ||||||||||    
T  7848 taagcattgc 7839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 30577 - 30360
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| | ||||||||||||| || |||||||||||||||  | ||| |||||||||||||||||| ||||||  |||||| |||||||||    
T  30577 acaaaagagagcaaagaaatcaacaaaaagaaaacttgaagcatctgaagcgaagtgctcctgaagacaaaagtgctcctgaagtgataaagtcatcaga 30478  T
Q  119 agcaagttcatcagaagcatc------------tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaattt 206  Q
    |||| |||||| |||||||||            ||  |||||| | || ||||||||||||| |||||||| ||||||||||||| ||||||||  |||     
T  30477 agcaggttcataagaagcatcagaagctgaagatctccagaagttgtaattcatcaggagatgcaagactt-aaagcttcaaaggatgttcaatagattc 30379  T
Q  207 aatctcgtctaagcattgc 225  Q
    |||||||||||||||||||    
T  30378 aatctcgtctaagcattgc 30360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 10219 - 10175
Alignment:
Q  25 gagagcaatggaatcaacaaaaaggaagcttgaagcatctgaata 69  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||    
T  10219 gagagcaattgaatcaacaagaaggaagcttgaagcatctgaata 10175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 74; Significance: 4e-34; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 5956 - 6173
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| | ||||||||||||| || |||||||||||||||  | ||| |||||||||||||||||| ||||||  |||||| |||||||||    
T  5956 acaaaagagagcaaagaaatcaacaaaaagaaaacttgaagcatctgaagcgaagtgctcctgaagacaaaagtgctcctgaagtgataaagtcatcaga 6055  T
Q  119 agcaagttcatcagaagcatc------------tcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaattt 206  Q
    |||| |||||| |||||||||            ||  |||||| | || ||||||||||||| |||||||| ||||||||||||| ||||||||  |||     
T  6056 agcaggttcataagaagcatcagaagctgaagatctccagaagttgtaattcatcaggagatgcaagactt-aaagcttcaaaggatgttcaatagattc 6154  T
Q  207 aatctcgtctaagcattgc 225  Q
    |||||||||||||||||||    
T  6155 aatctcgtctaagcattgc 6173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 212710 - 212580
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | ||||||||||||||||||||||||| | |||||| || ||| ||||||||| |||| ||| ||||||  | || |||||||||||    
T  212710 acaaaagagagctaaggaatcaacaaaaaggaagcttgaaacgtctgaagagaagtgctcctgaagtcaaa-gtgctcctgaagtaatgacgtcatcaga 212612  T
Q  119 agcaagttcatcagaagcatctcatcagaagc 150  Q
    ||||||||||||||||||||||||||||||||    
T  212611 agcaagttcatcagaagcatctcatcagaagc 212580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 212559 - 212491
Alignment:
Q  156 ttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||||||| ||||||||||| |||||||||||| ||| ||| ||| |||||||||||||||||||    
T  212559 ttcatcaggagatccaagacttaaa-gcttcaaaggctattctatggattcaatctcgtctaagcattgc 212491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 246074 - 246133
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| ||||||  |||| |||||||||||||||||||||||||||||    
T  246074 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagc 246133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 832 - 701
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||| || ||| ||| ||||| ||||| || || |||  |||| |||||||||||    
T  832 acaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcttgaagtcaaaa-tgctcatgaagtgatgacgtcatcaga 734  T
Q  119 agcaagttcatcagaagcatctcatcagaagct 151  Q
    |||||||| ||||||||||||||||||||||||    
T  733 agcaagtttatcagaagcatctcatcagaagct 701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 678 - 611
Alignment:
Q  157 tcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||||||| ||||||||||| || ||||||| ||||||||  |||||||||||||||||||||||    
T  678 tcatcaggagatgcaagacttaaa-gcgtcaaaggatgttcaattgatttaatctcgtctaagcattgc 611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 36530 - 36750
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||| || |||  |||| |||   | |||| ||||||  |||| |||||||||||    
T  36530 acaaaagagagcaatggaatcaaataaaaggaagcttgaagcatctgaagagaagtgatcctaaagt--atagtgctcctgaagtgatgacgtcatcaga 36627  T
Q  119 agcaagttcatcagaagcatctcatcagaagc-----------------tttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatg 201  Q
    ||||||||||| ||||||||||||||||||||                 |  ||||||||| ||||| ||||||||||| ||||||||||||| ||||||    
T  36628 agcaagttcattagaagcatctcatcagaagcagaagatcactagaagctgaagttcatcaagagatgcaagacttaaa-gcttcaaaggctgctcaatg 36726  T
Q  202 aatttaatctcgtctaagcattgc 225  Q
    ||||||||||||||||||||||||    
T  36727 aatttaatctcgtctaagcattgc 36750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 42475 - 42255
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||| || |||  |||| |||   | |||| ||||||  |||| |||||||||||    
T  42475 acaaaagagagcaatggaatcaaataaaaggaagcttgaagcatctgaagagaagtgatcctaaagt--atagtgctcctgaagtgatgacgtcatcaga 42378  T
Q  119 agcaagttcatcagaagcatctcatcagaagc-----------------tttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatg 201  Q
    ||||||||||| ||||||||||||||||||||                 |  ||||||||| ||||| ||||||||||| ||||||||||||| ||||||    
T  42377 agcaagttcattagaagcatctcatcagaagcagaagatcactagaagctgaagttcatcaagagatgcaagacttaaa-gcttcaaaggctgctcaatg 42279  T
Q  202 aatttaatctcgtctaagcattgc 225  Q
    ||||||||||||||||||||||||    
T  42278 aatttaatctcgtctaagcattgc 42255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 10150 - 10020
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| || | | || |||||| | |||||| ||||||  |||| |||||||||||    
T  10150 acaaaagagaggaatggaatcaacaaaaaggaagcttgaagcatctgaagagaaatgcttctgaagtc-aaagtgctcctgaagtgatgacgtcatcaga 10052  T
Q  119 agcaagttcatcagaagcatctcatcagaagc 150  Q
    |||||||| |||||||||||||||||| ||||    
T  10051 agcaagttaatcagaagcatctcatcataagc 10020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 10001 - 9933
Alignment:
Q  154 agttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcatt 223  Q
    |||||||| |||||| ||||| ||||| ||||||| |  |||| |||| |||||||||||||||||||||    
T  10001 agttcatctggagatgcaagatttaaa-gcttcaaggtttgtttaatggatttaatctcgtctaagcatt 9933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 60372 - 60152
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||||||||| ||||||| | || |||||| || | | ||| |||||||||||||| ||||||  |||| |||||||||||    
T  60372 acaaaagagagcaaaggaatcaacaaaaatgaagcttaaggcgtctgaagagaaatgctcttgaagacaaaagtgctcctgatgtgatgacgtcatcaga 60273  T
Q  119 agcaagttcatcagaagcatctcat---------------cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaa 203  Q
     |||||||||| |||||||||||||               ||||||||  |||||||||| |||| |||||||| ||||||||||||| ||||||||| |    
T  60272 tgcaagttcattagaagcatctcataagaagcaagatcaccagaagctaaagttcatcagaagatgcaagactt-aaagcttcaaaggatgttcaatgga 60174  T
Q  204 tttaatctcgtctaagcattgc 225  Q
    |||||||||||| ||| |||||    
T  60173 tttaatctcgtccaagaattgc 60152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 224
Target Start/End: Complemental strand, 8253 - 8063
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| ||||||||||||||| |||||| | || |||||| || ||| |||||||||||||||||| ||||||  |||| |||||||||||    
T  8253 acaaaagagagcaaaggaatcaacaaaaagtaagcttaaggcgtctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatgacgtcatcaga 8154  T
Q  119 agcaagttcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    ||||||               | | ||||||||  ||||||||||||||| ||| |||| ||||||||||||| ||||||||| ||||||||||||| ||    
T  8153 agcaag--------------ataaccagaagctaaagttcatcaggagatgcaaaactt-aaagcttcaaaggttgttcaatggatttaatctcgtccaa 8069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 150
Target Start/End: Complemental strand, 115860 - 115746
Alignment:
Q  35 gaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaa 134  Q
    |||||||||||||||||||| |||| |||| || ||  |||||||||||| |||| ||| ||||||  |||| ||||||||| ||||||||| |||||||    
T  115860 gaatcaacaaaaaggaagctagaagaatctaaagagatgttctcctgaagtcaaa-gtgctcctgaagtgatgacgtcatcaaaagcaagtttatcagaa 115762  T
Q  135 gcatctcatcagaagc 150  Q
    ||||||||||||||||    
T  115761 gcatctcatcagaagc 115746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 151714 - 151831
Alignment:
Q  90 agtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaa 189  Q
    |||| ||||||  |||| |||||||||||||||||||||||||||||| ||||| ||||||   || ||| ||| ||||   |||||| |||||||||||    
T  151714 agtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcacctcatgagaagc--aagatcaccagaagatgagagactt-aaagcttcaaa 151810  T
Q  190 ggctgttcaatgaatttaatc 210  Q
    || ||||||| | ||||||||    
T  151811 ggttgttcaaaggatttaatc 151831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 103913 - 103708
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||||||  ||||||||||| ||||||||||||||||||||| || ||  |||||||||||||||||| | || |  |||| |||||||||||    
T  103913 acaaaagagagcaaatgaatcaacaaataggaagcttgaagcatctgaagagaagcgctcctgaagacaaaagtgctactaaagtgatgacgtcatcaga 103814  T
Q  119 agcaagttcatcagaagc-atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtcta 217  Q
    ||  |  ||||||||||| |   || ||||||||  ||||||||||||||| |||||||| ||||||| ||||| |||| |||||||||||| | |||||    
T  103813 ag-tatctcatcagaagcaaggacaccagaagctgaagttcatcaggagatgcaagactt-aaagcttgaaaggttgttaaatgaatttaattttgtcta 103716  T
Q  218 agcattgc 225  Q
    | ||||||    
T  103715 aacattgc 103708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 20725 - 20946
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | ||||||||||||||||||| ||||||| |||||| || ||| |||||||||  || |||| ||||||  |||| |||||||||||    
T  20725 acaaaagagagctaaggaatcaacaaaaaggaagtttgaagcgtctgaagagaagtgctcctgaag-taatagtgctcctgaagtgatgacgtcatcaga 20823  T
Q  119 agcaagttcatcagaagcatctcatcagaagct---------------tt--agttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatg 201  Q
    | ||||||||||||||||||||||| |||||||               ||  ||||||||| ||||| |||||||| ||||||||||||| ||||||||     
T  20824 aacaagttcatcagaagcatctcattagaagctgaagatcaccaaaagttgaagttcatcaagagatgcaagactt-aaagcttcaaaggttgttcaatt 20922  T
Q  202 aatttaatctcgtctaagcattgc 225  Q
     |||||||||||||||||||||||    
T  20923 gatttaatctcgtctaagcattgc 20946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 89825 - 90024
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||| ||||||||| |||||||||||||||||||||| |||| |||||| |  | |  |||||||||| |||||| ||||||  || | |||||||||||    
T  89825 acaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaattgttcctgaagac-aaagtgctcctgaagtggtgacgtcatcaga 89923  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtc 215  Q
    ||||||||||||||||||   |  ||| ||||||||  ||||||||||||||| ||  |||| ||||||||||||| || |||||| |||||||||||||    
T  89924 agcaagttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagatgca--actt-aaagcttcaaaggttgatcaatgtatttaatctcgtc 90020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 6346 - 6157
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||| |  ||| ||||||||| |  ||||| ||||||  |||| |||||||||||    
T  6346 acaaatgagagcaatggaatcaacaagaaggaagcttgaagcatctgaagaaaagtgctcctgaagtc--aagtgttcctgaagtgatgacgtcatcaga 6249  T
Q  119 agcaagttcatcagaagc-atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatc 210  Q
    |||||||||||||||||| || |||  ||||| |  |||||||||| ||||   ||| || |||||||||||| |||||||| | ||||||||    
T  6248 agcaagttcatcagaagcaatatcactagaagttgaagttcatcagaagatgagaga-tttaaagcttcaaagactgttcaaaggatttaatc 6157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 19228 - 19358
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaa-ggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcag 117  Q
    |||||||||||| | ||| |||||||||| ||||||||||||| |||||| || ||| ||||||||| |||  ||| ||||||  |||||||||||||||    
T  19228 acaaaagagagctaaggagtcaacaaaaaaggaagcttgaagcgtctgaagagaagtgctcctgaagtcaa--gtgctcctgaagtgataacgtcatcag 19325  T
Q  118 aagcaagttcatcagaagcatctcatcagaagc 150  Q
    |||||||||||||||||||||||||| ||||||    
T  19326 aagcaagttcatcagaagcatctcataagaagc 19358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 19376 - 19447
Alignment:
Q  153 tagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||| ||||||| ||||||||||| |||||||| | ||||||||| ||||||| ||| ||||| |||||    
T  19376 tagttcatgaggagatgcaagacttaaa-gcttcaaaagttgttcaatggatttaatttcgcctaagaattgc 19447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 1987 - 1796
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| |||||||| ||||||||||||| ||||||||| | || ||| ||||||||||| ||| || ||||||  |||| |||||||||||    
T  1987 acaaaagagagcaaaggaatcaataaaaaggaagcttaaagcatctgcagagaagtgctcctgaagactaaaatgctcctgaagtgatgacgtcatcaga 1888  T
Q  119 agcaagttcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    ||||||               ||| ||||||||  ||||||||||||||| |||||||| ||||||||||||| ||||||||| ||| ||||||||||||    
T  1887 agcaag--------------atcaccagaagctgaagttcatcaggagatgcaagactt-aaagcttcaaaggttgttcaatggattcaatctcgtctaa 1803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 25 - 224
Target Start/End: Original strand, 5452 - 5664
Alignment:
Q  25 gagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaag 124  Q
    ||||||||  |||||||| |||||||| |||||||| |||||| || ||| |||||||||  ||||||| ||||||  |||| |||||||||||||||||    
T  5452 gagagcaaatgaatcaactaaaaggaaccttgaagcgtctgaagagaagtgctcctgaagt-aaaagtgctcctgaagtgatgacgtcatcagaagcaag 5550  T
Q  125 ttcatcagaagcatctc------------atca---gaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaat 209  Q
    |||||||||||||||||            ||||   ||||||  ||||||||||||||| |||||||| | ||||||||||| ||||||||| |||||||    
T  5551 ttcatcagaagcatctcactagaagcaagatcacctgaagctgaagttcatcaggagatgcaagactt-agagcttcaaaggttgttcaatggatttaat 5649  T
Q  210 ctcgtctaagcattg 224  Q
    |||||| ||| ||||    
T  5650 ctcgtccaagtattg 5664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 22924 - 22812
Alignment:
Q  115 cagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatct 211  Q
    ||||||||||||||||||||||   |  ||| |||| ||| |||||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||||    
T  22924 cagaagcaagttcatcagaagctgaagatcaccagaggctgtagttcatcaggagatgcaagacttaaa-gcttcaaaggttgttcaatggatttaatct 22826  T
Q  212 cgtctaagcattgc 225  Q
    ||||||||||||||    
T  22825 cgtctaagcattgc 22812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 60; Significance: 9e-26; HSPs: 6)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 220587 - 220463
Alignment:
Q  25 gagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaag 124  Q
    |||||| |||||||||||||||||||| |||||||| |||||| |  ||| ||||||||| |||  ||| ||||||  | || |||||||||||||||||    
T  220587 gagagctatggaatcaacaaaaaggaaccttgaagcgtctgaagaaaagtgctcctgaagtcaa--gtgctcctgaagtaatgacgtcatcagaagcaag 220490  T
Q  125 ttcatcagaagcatctcatcagaagct 151  Q
    ||||||||||||| |||||||||||||    
T  220489 ttcatcagaagcacctcatcagaagct 220463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 225
Target Start/End: Original strand, 377383 - 377534
Alignment:
Q  90 agtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatcagaagc-----------------tttagttcatcaggagatacaa 172  Q
    |||| ||||||  |||| |||||||||||||||||||||||||||||||||||||||||||                 | |||||||||||||||| |||    
T  377383 agtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcatctcatcagaagctgaagatcaccagaagttatagttcatcaggagatgcaa 377482  T
Q  173 gacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||| ||||||| | |||| |||| |||||||||||||||||||||||    
T  377483 gacttaaaa-cttcaaatgttgttgaatggatttaatctcgtctaagcattgc 377534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 244015 - 244137
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagt 125  Q
    ||||||||||||||||||| |||||||||||||||||||||| |  ||   | |||||| |  ||||| || |||  |||| ||||||||| ||||||||    
T  244015 agagcaatggaatcaacaagaaggaagcttgaagcatctgaagaaaagaggttctgaagtc--aagtgctcatgaagtgatgacgtcatcaaaagcaagt 244112  T
Q  126 tcatcagaagcatctcatcagaagc 150  Q
    |||||| ||| | ||||||||||||    
T  244113 tcatcaaaagtacctcatcagaagc 244137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 220443 - 220373
Alignment:
Q  154 agttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||||||||||||   ||||||||| ||||||||||||||||| ||  ||||||||||||||||||||||    
T  220443 agttcatcaggagatgagagacttaaa-gcttcaaaggctgttcattggttttaatctcgtctaagcattgc 220373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 377330 - 377395
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    |||||||||||| | ||||||||| |||||||||||| |||  |||||| || ||| |||||||||    
T  377330 acaaaagagagctaaggaatcaactaaaaggaagcttaaagtgtctgaagagtagtgctcctgaag 377395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 30625 - 30661
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagctt 55  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  30625 acaaaagagagcaaaggaatcaacaaaatggaagctt 30661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 13968 - 13850
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||||| ||||||||| |||||||||||| | || || ||| || ||| |||||||||||||||||| ||||||  | || | |||||||||    
T  13968 acaaaagagagcaaaggaatcaacgaaaaggaagcttaatgcgtcagaagagaagtgctcctgaagacaaaagtgctcctgaagtaatgatgtcatcaga 13869  T
Q  119 agcaagttcatcagaagca 137  Q
    |||||||||||||||||||    
T  13868 agcaagttcatcagaagca 13850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 225
Target Start/End: Complemental strand, 13741 - 13707
Alignment:
Q  191 gctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||||| |||||||||||||||||||||||    
T  13741 gctgttcaatggatttaatctcgtctaagcattgc 13707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 89 - 225
Target Start/End: Complemental strand, 10241 - 10105
Alignment:
Q  89 aagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatc-tcatcagaagctttagttcatcaggagatacaagacttaaaagcttca 187  Q
    ||||| ||||||  |||| ||||||||||||||||||||||||||||||   |||  ||||| |  ||||||||||||||| ||||||||||| ||||||    
T  10241 aagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcaagatcacaagaagttgaagttcatcaggagatgcaagacttaaa-gcttca 10143  T
Q  188 aaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||||| ||||||| ||| |||||||||||||| ||||    
T  10142 aaggctattcaatggattcaatctcgtctaagctttgc 10105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 67
Target Start/End: Complemental strand, 10277 - 10245
Alignment:
Q  35 gaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||||| |||||||||||||||||||||||||    
T  10277 gaatcaataaaaaggaagcttgaagcatctgaa 10245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 19285 - 19167
Alignment:
Q  109 cgtcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatt 205  Q
    |||||||||||||||||| ||||||||    |  ||| |||||||| || ||||||||| ||||||||||||||| |||| ||||||||||||||| |||    
T  19285 cgtcatcagaagcaagtttatcagaagttgaagatcaccagaagctctatttcatcaggtgatacaagacttaaa-gcttgaaaggctgttcaatggatt 19187  T
Q  206 taatctcgtctaagcattgc 225  Q
    |||||||||| |||||||||    
T  19186 taatctcgtcaaagcattgc 19167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 19391 - 19343
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    |||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  19391 acaatagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaa 19343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 21928 - 21988
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||||||||||| |||  |||||  |||| ||||||||||||||||| ||||||||||||    
T  21928 ctcctgaagacaaa-gtgcacctgaagtgatgacgtcatcagaagcaaggtcatcagaagca 21988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 15442 - 15253
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | |||||||||||||||||||||| |||| |||||| || ||| ||||||||| |  ||||| | ||||  |||| |||||||||||    
T  15442 acaaaagagagctaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagtc--aagtgcttctgaagtgatgacgtcatcaga 15345  T
Q  119 agcaagttcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaa 218  Q
    |||||| ||| ||||||      || |        ||| ||| ||||||| |||||||| |||||||||||||||| |||||| ||||||||||||||||    
T  15344 agcaagatcaccagaag------atga--------agtgcataaggagatgcaagactt-aaagcttcaaaggctgatcaatggatttaatctcgtctaa 15260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 449 - 557
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagt 125  Q
    ||||||| |||||||||||||||||||||| |||| |||||| |  | | ||||||||||| |||||| ||||||  || | ||||||||||||||||||    
T  449 agagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagac-aaagtgctcctgaagtggtgacgtcatcagaagcaagt 547  T
Q  126 tcatcagaag 135  Q
    ||||||||||    
T  548 tcatcagaag 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 5708 - 5915
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | ||||||||||||||||||| |||||||||||||| |  ||| ||| |||||    ||||| | || |  | || ||||| |||||    
T  5708 acaaaagagagctaaggaatcaacaaaaaggaagtttgaagcatctgaagaaaagtgctcatgaag--tgaagtgcttctaaagtaatgacgtcttcaga 5805  T
Q  119 agcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttc-aaaggctgttcaatgaatttaatctcgt 214  Q
    || |||||||||||||||   |  ||| ||||||||  ||||||| ||||||| |||||||| |||||||| ||||| ||||||||| |||| |||||||    
T  5806 agtaagttcatcagaagctaaagatcaccagaagctgaagttcattaggagatgcaagactt-aaagcttcaaaaggatgttcaatggatttcatctcgt 5904  T
Q  215 ctaagcattgc 225  Q
     ||||||||||    
T  5905 ttaagcattgc 5915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 47; Significance: 5e-18; HSPs: 3)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 4895 - 4968
Alignment:
Q  151 tttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||| ||||||| ||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||    
T  4895 tttaattcatcaagagatgcaagacttaaa-gcttcaaaggttgttcaatggatttaatctcgtctaagcattgc 4968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 4764 - 4829
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    ||||||| |||||| |||||||||||||||||||||| |||| |||||| || ||| |||||||||    
T  4764 acaaaagggagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaag 4829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 4816 - 4878
Alignment:
Q  89 aagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatcagaagct 151  Q
    ||||| ||||||  |||||||||||||| |||||||||||||| |||||||| || |||||||    
T  4816 aagtgctcctgaagtgataacgtcatcaaaagcaagttcatcaaaagcatcttattagaagct 4878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 9891 - 10083
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||| || ||| |||||||||   | |||| ||||||  |||| |||||||||||    
T  9891 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagaatatgaagagaagtgctcctgaag--tatagtgctcctgaagtgatgacgtcatcaga 9988  T
Q  119 agcaagttcatcagaagcatctcatcagaagctttagttcatcaggagatacaagacttaaaagcttc-aaaggctgttcaatgaatttaatctcgtcta 217  Q
    | |       | | ||     ||| ||||||||  ||||||||||||||| |||||||| |||||||| ||||| ||||||||| |||||||||| ||||    
T  9989 aac-------tgaaaa-----tcaccagaagctgaagttcatcaggagatgcaagactt-aaagcttcaaaaggttgttcaatggatttaatctcatcta 10075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 25870 - 25950
Alignment:
Q  144 cagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    ||||||||  || |||||||||||| ||||||||||| || ||||||| ||||||||| |||||||||||||||||||||||    
T  25870 cagaagctaaagctcatcaggagatgcaagacttaaa-gcgtcaaaggttgttcaatggatttaatctcgtctaagcattgc 25950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 25746 - 25811
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    |||||||||||||| ||||||||||||||||||| || | || |||||| || ||| |||||||||    
T  25746 acaaaagagagcaaaggaatcaacaaaaaggaagattaaggcgtctgaagagaagtgctcctgaag 25811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 25798 - 25860
Alignment:
Q  89 aagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatctcatcagaagct 151  Q
    ||||| ||||||  |||| ||||||||||||||| |||||| | || ||||||||||||||||    
T  25798 aagtgctcctgaagtgatgacgtcatcagaagcacgttcatgaaaaacatctcatcagaagct 25860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 2060 - 1944
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | |||||||||||||| ||||||| |||  |||||| || ||| ||||||||| | |||||| || |||  |||| |||||||||||    
T  2060 acaaaagagagcgaaggaatcaacaaaaatgaagcttaaagtgtctgaagagaagtgctcctgaagtc-aaagtgctcatgaagtgatgacgtcatcaga 1962  T
Q  119 agcaagttcatcagaagc 136  Q
    |||||| |||||||||||    
T  1961 agcaaggtcatcagaagc 1944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 1893 - 1826
Alignment:
Q  157 tcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||| |||| || ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||    
T  1893 tcattaggaaatgcaagacttaaa-gcttcaaaggttgttcaatggatttaatctcgtctaagcattgc 1826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 1955 - 1915
Alignment:
Q  110 gtcatcagaagcaagttcatcagaagcatctcatcagaagc 150  Q
    |||||||||||| ||||||| |||| |||||||||||||||    
T  1955 gtcatcagaagctagttcattagaaacatctcatcagaagc 1915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 35562 - 35442
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaag-gaagcttgaagcatctgaa---tagcagttctcctgaagacaaaagtgatcctgagctgataacgtcat 114  Q
    |||||||||||||| ||||||||||||||| ||||| | |||||||||||   | | ||| |||||||||||||| |||   ||||  |||| |||||||    
T  35562 acaaaagagagcaaaggaatcaacaaaaagagaagcctaaagcatctgaagttttgaagtgctcctgaagacaaa-gtgcctctgaagtgatgacgtcat 35464  T
Q  115 cagaagcaagttcatcagaagc 136  Q
    ||||||||||||||||||||||    
T  35463 cagaagcaagttcatcagaagc 35442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 225
Target Start/End: Complemental strand, 143340 - 143224
Alignment:
Q  111 tcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaattta 207  Q
    ||||||||||||||||||||||||||   |  |||  ||||||| || ||||||| ||||| ||||||| ||| |||| ||||||| ||||||| |||||    
T  143340 tcatcagaagcaagttcatcagaagctgaagatcactagaagctctatttcatcacgagatgcaagactcaaa-gcttgaaaggctattcaatggattta 143242  T
Q  208 atctcgtctaagcattgc 225  Q
    |||||||| |||||||||    
T  143241 atctcgtcaaagcattgc 143224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 143447 - 143399
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    |||| ||||||||| |||||||| ||||||||||||| |||| ||||||    
T  143447 acaatagagagcaaaggaatcaagaaaaaggaagcttaaagcgtctgaa 143399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 196
Target Start/End: Original strand, 17602 - 17721
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc---atctcatcagaagctttagttcatcaggagatacaa 172  Q
    |||||||||||||| ||||||||||  |||| |||||||||||||||||||||||||||||      ||| ||||||||| | ||||||||||||||||     
T  17602 ctcctgaagacaaa-gtgatcctgaagtgatgacgtcatcagaagcaagttcatcagaagctgtgaatcaccagaagcttcaattcatcaggagataca- 17699  T
Q  173 gacttaaaagcttcaaaggctgtt 196  Q
     |||| ||||||||||| ||||||    
T  17700 -actt-aaagcttcaaaagctgtt 17721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 13304 - 13418
Alignment:
Q  35 gaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaa 134  Q
    ||||||||||||| ||||||||||||||||||| || ||| |||||||  |    |||| ||||||  |||| | ||||| | ||||| |||||||||||    
T  13304 gaatcaacaaaaaagaagcttgaagcatctgaagagaagtgctcctga--aatttagtgctcctgaagtgatgatgtcattaaaagcatgttcatcagaa 13401  T
Q  135 gcatctcatcagaagct 151  Q
    |||||||||||||||||    
T  13402 gcatctcatcagaagct 13418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 14851 - 14784
Alignment:
Q  157 tcatcaggagatacaagacttaaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 225  Q
    |||| |||| || ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||    
T  14851 tcattaggaaatgcaagacttaaa-gcttcaaaggttgttcaatggatttaatctcgtctaagcattgc 14784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 15018 - 14902
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcaga 118  Q
    |||||||||||| | |||||||||||||| ||||||| |||  |||||| || ||| ||||| ||| | |||||| || |||  |||  |||||||||||    
T  15018 acaaaagagagcgaaggaatcaacaaaaatgaagcttaaagtgtctgaagagaagtgctccttaagtc-aaagtgctcatgaagtgacgacgtcatcaga 14920  T
Q  119 agcaagttcatcagaagc 136  Q
    |||||| |||||||||||    
T  14919 agcaaggtcatcagaagc 14902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 14913 - 14873
Alignment:
Q  110 gtcatcagaagcaagttcatcagaagcatctcatcagaagc 150  Q
    |||||||||||| ||||||| |||| |||||||||||||||    
T  14913 gtcatcagaagctagttcattagaaacatctcatcagaagc 14873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 23350 - 23449
Alignment:
Q  37 atcaacaaaaagg-aagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaag 135  Q
    ||||||||||||| |||||| |||| |||||| |  | | |||||||||||||| ||| ||||||  |||||||||||||| ||||||||||||||||||    
T  23350 atcaacaaaaagggaagcttaaagcgtctgaagaaaactgctcctgaagacaaa-gtgctcctgaagtgataacgtcatcaaaagcaagttcatcagaag 23448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 43666 - 43789
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagt 125  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |  ||   | ||||||   || ||| || |||  |||| ||||||||||||||||||    
T  43666 agagcaatggaatcagcaagaaggaagcttgaagcatctgaagaaaagaggttctgaagttcaa-gtgctcttgaagtgatgacgtcatcagaagcaagt 43764  T
Q  126 tcatcagaagcatctcatcagaagc 150  Q
    |||||||||||| || |||||||||    
T  43765 tcatcagaagcacctaatcagaagc 43789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 25486 - 25561
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagcatc-tcatcagaagct 151  Q
    |||||||||||||| ||| ||||||  |||| |||||||||||||||||||||||||||||| | ||||||||||||    
T  25486 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcaacttcatcagaagct 25561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 36024 - 36071
Alignment:
Q  103 tgataacgtcatcagaagcaagttcatcagaagcatctcatcagaagc 150  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||    
T  36024 tgatgacgtcatcagaagcaagttcatcagaagcacctcatcagaagc 36071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 34640 - 34699
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||| ||| ||||||  |||| |||||||||||||||||||||||||||||    
T  34640 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagc 34699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 9252 - 9292
Alignment:
Q  110 gtcatcagaagcaagttcatcagaagcatctcatcagaagc 150  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  9252 gtcatcagaagaaagttcatcagaagcatctcatcagaagc 9292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 9131 - 9195
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    ||||||||||||||  |||||||||||| ||||||||||||| |||||| || |||  ||||||||    
T  9131 acaaaagagagcaaatgaatcaacaaaa-ggaagcttgaagcgtctgaagagaagtgatcctgaag 9195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 9214 - 9262
Alignment:
Q  87 aaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaag 135  Q
    ||||||| ||||||  |||| ||||||||||||||||| ||||||||||    
T  9214 aaaagtgctcctgaagtgatgacgtcatcagaagcaaggtcatcagaag 9262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 41001 - 40953
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||||||||    
T  41001 acaaatgagagcaatggaatcaacaaaaaggaagtttgaaccatctgaa 40953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 60654 - 60704
Alignment:
Q  34 ggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    ||||||||||||||||||||||||||| |||||| || ||| |||||||||    
T  60654 ggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcctgaag 60704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 3618 - 3558
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||||||||||| ||| ||||||  |||| ||||||||||||||||| ||||||||||||    
T  3618 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaagcaaggtcatcagaagca 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 8567 - 8511
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcaga 133  Q
    |||||||||||||| ||| ||||||  |||| ||||||||||||||||||||||||||    
T  8567 ctcctgaagacaaa-gtgctcctgaagtgatgacgtcatcagaagcaagttcatcaga 8511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 2551 - 2598
Alignment:
Q  89 aagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    ||||| ||||||  |||| |||||||||||||||||||||||||||||    
T  2551 aagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagc 2598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 137
Target Start/End: Original strand, 15454 - 15489
Alignment:
Q  102 ctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    ||||| ||||||||||||||||||||||||||||||    
T  15454 ctgatgacgtcatcagaagcaagttcatcagaagca 15489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 10287 - 10229
Alignment:
Q  26 agagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    ||||| ||||||| ||||||||||||||||||||| |||||| |  ||| |||||||||    
T  10287 agagctatggaataaacaaaaaggaagcttgaagcgtctgaagaaaagtgctcctgaag 10229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 78193 - 78250
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaa 134  Q
    |||||||||||||| ||| ||||||  |||| | |||||||||||||||||||||||||    
T  78193 ctcctgaagacaaa-gtgctcctgaagtgatgatgtcatcagaagcaagttcatcagaa 78250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 74920 - 74855
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaatagcagttctcctgaag 84  Q
    ||||| ||||||| |||||||||||| ||| ||| |||||||||||||| |  ||| |||||||||    
T  74920 acaaacgagagcagtggaatcaacaagaagaaaggttgaagcatctgaagaaaagtgctcctgaag 74855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 997 - 937
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagca 137  Q
    |||||||||||||| ||| | ||||  |||| |||||||||||||||||||||||| |||||    
T  997 ctcctgaagacaaa-gtgcttctgaagtgatgacgtcatcagaagcaagttcatcataagca 937  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 137
Target Start/End: Original strand, 215340 - 215369
Alignment:
Q  108 acgtcatcagaagcaagttcatcagaagca 137  Q
    ||||||||||||||||||||||||||||||    
T  215340 acgtcatcagaagcaagttcatcagaagca 215369  T

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Target: scaffold1331 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 136
Target Start/End: Original strand, 469 - 497
Alignment:
Q  108 acgtcatcagaagcaagttcatcagaagc 136  Q
    |||||||||||||||||||||||||||||    
T  469 acgtcatcagaagcaagttcatcagaagc 497  T

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Target: scaffold0439 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 6537 - 6596
Alignment:
Q  76 ctcctgaagacaaaagtgatcctgagctgataacgtcatcagaagcaagttcatcagaagc 136  Q
    ||||||||||||||| || ||||||  |||| |||||||||| ||||||||||||| ||||    
T  6537 ctcctgaagacaaaa-tgctcctgaagtgatgacgtcatcaggagcaagttcatcaaaagc 6596  T

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Target: scaffold0040 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 1259 - 1307
Alignment:
Q  19 acaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaa 67  Q
    ||||| ||||||||   ||||||||| ||||||||||||||||||||||    
T  1259 acaaatgagagcaacataatcaacaagaaggaagcttgaagcatctgaa 1307  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 134
Target Start/End: Original strand, 164767 - 164799
Alignment:
Q  102 ctgataacgtcatcagaagcaagttcatcagaa 134  Q
    ||||| |||||||||||||||||||||||||||    
T  164767 ctgatgacgtcatcagaagcaagttcatcagaa 164799  T

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