View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4281_high_4 (Length: 442)

Name: NF4281_high_4
Description: NF4281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4281_high_4
NF4281_high_4
[»] chr1 (38 HSPs)
chr1 (186-424)||(11031195-11031433)
chr1 (17-197)||(11032268-11032447)
chr1 (35-260)||(35109423-35109645)
chr1 (137-317)||(22819518-22819700)
chr1 (104-232)||(32736909-32737037)
chr1 (110-232)||(918392-918515)
chr1 (165-317)||(47102667-47102821)
chr1 (137-317)||(47098653-47098833)
chr1 (106-251)||(10997016-10997159)
chr1 (104-310)||(8281374-8281581)
chr1 (137-317)||(40816642-40816822)
chr1 (109-206)||(3019791-3019888)
chr1 (313-413)||(3460505-3460605)
chr1 (139-232)||(17345432-17345525)
chr1 (108-317)||(16124342-16124553)
chr1 (137-317)||(19073017-19073199)
chr1 (137-317)||(19120907-19121089)
chr1 (77-317)||(47703761-47704004)
chr1 (144-308)||(25116537-25116702)
chr1 (138-317)||(29651901-29652082)
chr1 (137-317)||(9476350-9476531)
chr1 (108-199)||(9023785-9023876)
chr1 (139-317)||(13598489-13598669)
chr1 (192-317)||(9022734-9022857)
chr1 (166-232)||(32889558-32889624)
chr1 (178-231)||(6628910-6628963)
chr1 (137-194)||(8550883-8550941)
chr1 (108-201)||(37918719-37918810)
chr1 (136-188)||(8871143-8871197)
chr1 (136-195)||(34603589-34603649)
chr1 (276-313)||(928174-928211)
chr1 (136-194)||(37168311-37168370)
chr1 (136-194)||(41360928-41360987)
chr1 (108-185)||(48382441-48382518)
chr1 (248-317)||(3281906-3281976)
chr1 (136-193)||(7482326-7482384)
chr1 (248-317)||(13604450-13604520)
chr1 (248-317)||(37069966-37070036)
[»] chr8 (32 HSPs)
chr8 (77-232)||(9054750-9054905)
chr8 (108-317)||(7493001-7493210)
chr8 (78-315)||(3051150-3051387)
chr8 (137-317)||(5702308-5702491)
chr8 (123-253)||(5990454-5990583)
chr8 (166-317)||(19752222-19752372)
chr8 (106-209)||(8863562-8863664)
chr8 (94-209)||(6813729-6813845)
chr8 (136-315)||(28307649-28307829)
chr8 (123-232)||(34477135-34477241)
chr8 (108-206)||(11772001-11772098)
chr8 (137-317)||(4696436-4696615)
chr8 (166-317)||(26403055-26403208)
chr8 (108-232)||(14601223-14601347)
chr8 (131-230)||(33503755-33503855)
chr8 (137-232)||(42093092-42093188)
chr8 (104-232)||(31513245-31513367)
chr8 (87-317)||(23799404-23799635)
chr8 (94-263)||(6127267-6127437)
chr8 (137-194)||(30291620-30291679)
chr8 (131-216)||(37021020-37021105)
chr8 (137-194)||(40328793-40328851)
chr8 (137-194)||(41364943-41365001)
chr8 (276-318)||(3318745-3318787)
chr8 (137-196)||(11383997-11384057)
chr8 (136-194)||(19491794-19491853)
chr8 (125-170)||(28388061-28388106)
chr8 (108-153)||(33079743-33079788)
chr8 (137-194)||(3303766-3303824)
chr8 (313-349)||(8153629-8153665)
chr8 (248-317)||(19175582-19175652)
chr8 (135-206)||(37043658-37043731)
[»] chr2 (42 HSPs)
chr2 (22-310)||(28770608-28770896)
chr2 (26-317)||(2869520-2869812)
chr2 (94-310)||(18674235-18674452)
chr2 (108-317)||(15903718-15903926)
chr2 (143-317)||(40015020-40015194)
chr2 (131-313)||(3278084-3278266)
chr2 (26-166)||(16388449-16388589)
chr2 (137-317)||(14698837-14699016)
chr2 (77-233)||(27149206-27149362)
chr2 (77-306)||(8040089-8040322)
chr2 (108-232)||(35397572-35397694)
chr2 (166-317)||(34388969-34389120)
chr2 (94-317)||(21629989-21630214)
chr2 (89-204)||(27139843-27139958)
chr2 (77-317)||(13569357-13569598)
chr2 (137-317)||(31056133-31056314)
chr2 (107-212)||(12632605-12632709)
chr2 (108-317)||(10707080-10707289)
chr2 (137-317)||(39483020-39483202)
chr2 (137-317)||(2837855-2838038)
chr2 (99-212)||(5077782-5077896)
chr2 (94-263)||(8390032-8390201)
chr2 (137-317)||(33118225-33118404)
chr2 (108-317)||(33528452-33528658)
chr2 (240-317)||(10445295-10445373)
chr2 (145-232)||(41586464-41586549)
chr2 (108-194)||(20522280-20522367)
chr2 (108-312)||(17865263-17865469)
chr2 (136-194)||(11690515-11690574)
chr2 (136-194)||(42362366-42362425)
chr2 (248-317)||(40739033-40739103)
chr2 (136-196)||(723839-723900)
chr2 (248-312)||(23078304-23078369)
chr2 (137-194)||(10445394-10445452)
chr2 (123-194)||(11151673-11151745)
chr2 (136-194)||(14633921-14633980)
chr2 (136-194)||(24885675-24885734)
chr2 (136-194)||(34139866-34139925)
chr2 (160-216)||(1345470-1345525)
chr2 (137-194)||(14202501-14202559)
chr2 (137-198)||(26353193-26353256)
chr2 (248-317)||(36757590-36757660)
[»] chr4 (35 HSPs)
chr4 (108-317)||(37781922-37782133)
chr4 (77-317)||(39774133-39774373)
chr4 (136-317)||(5112325-5112506)
chr4 (96-310)||(34670499-34670711)
chr4 (108-232)||(18912276-18912400)
chr4 (77-317)||(18377388-18377628)
chr4 (111-231)||(39593791-39593910)
chr4 (108-263)||(1983184-1983337)
chr4 (108-317)||(3777609-3777818)
chr4 (137-317)||(25861861-25862041)
chr4 (94-310)||(873352-873569)
chr4 (77-317)||(16623121-16623361)
chr4 (108-216)||(4956239-4956352)
chr4 (108-203)||(8114680-8114774)
chr4 (108-317)||(10047439-10047650)
chr4 (137-317)||(5269028-5269210)
chr4 (165-317)||(6743243-6743395)
chr4 (137-317)||(42599402-42599581)
chr4 (172-317)||(24333935-24334082)
chr4 (123-230)||(42234286-42234390)
chr4 (120-232)||(36175180-36175290)
chr4 (77-193)||(36315181-36315297)
chr4 (77-193)||(36329390-36329506)
chr4 (123-196)||(5871832-5871906)
chr4 (137-194)||(31474164-31474223)
chr4 (177-317)||(16628700-16628839)
chr4 (276-315)||(52467551-52467590)
chr4 (381-415)||(5349708-5349742)
chr4 (276-314)||(24969045-24969083)
chr4 (160-194)||(45687303-45687337)
chr4 (136-194)||(379394-379453)
chr4 (94-194)||(3796469-3796570)
chr4 (77-193)||(5396623-5396739)
chr4 (276-317)||(37229919-37229960)
chr4 (283-315)||(6677401-6677433)
[»] scaffold0016 (2 HSPs)
scaffold0016 (104-260)||(102380-102535)
scaffold0016 (313-351)||(114456-114494)
[»] chr7 (31 HSPs)
chr7 (77-317)||(5817098-5817337)
chr7 (26-198)||(28617172-28617344)
chr7 (137-317)||(23402841-23403022)
chr7 (137-317)||(20284177-20284358)
chr7 (137-317)||(3047344-3047523)
chr7 (94-317)||(29159849-29160076)
chr7 (166-316)||(9185003-9185153)
chr7 (166-316)||(9189836-9189986)
chr7 (166-317)||(2580508-2580659)
chr7 (137-313)||(9235414-9235591)
chr7 (137-316)||(33332279-33332458)
chr7 (108-317)||(2647525-2647733)
chr7 (313-413)||(36574780-36574879)
chr7 (137-194)||(24525992-24526051)
chr7 (135-202)||(761261-761328)
chr7 (108-258)||(4162655-4162805)
chr7 (108-309)||(49091721-49091924)
chr7 (108-263)||(56007-56163)
chr7 (137-317)||(4796496-4796675)
chr7 (137-309)||(35960905-35961078)
chr7 (276-317)||(36146605-36146646)
chr7 (163-232)||(45685658-45685727)
chr7 (108-194)||(46516260-46516347)
chr7 (242-317)||(46516133-46516209)
chr7 (136-194)||(8359412-8359471)
chr7 (137-195)||(23565157-23565217)
chr7 (313-342)||(30843510-30843539)
chr7 (126-188)||(36574601-36574665)
chr7 (136-196)||(41649106-41649166)
chr7 (248-317)||(2479535-2479605)
chr7 (313-349)||(4253794-4253830)
[»] chr6 (23 HSPs)
chr6 (104-316)||(33721387-33721600)
chr6 (104-269)||(30518006-30518169)
chr6 (108-216)||(1115033-1115141)
chr6 (160-316)||(14521785-14521944)
chr6 (138-317)||(24435799-24435978)
chr6 (166-317)||(31936695-31936844)
chr6 (137-251)||(99245-99357)
chr6 (108-312)||(5572076-5572278)
chr6 (137-317)||(31979602-31979781)
chr6 (135-194)||(16569047-16569108)
chr6 (108-263)||(10077051-10077202)
chr6 (108-232)||(31076849-31076978)
chr6 (240-317)||(5017324-5017402)
chr6 (95-317)||(21801170-21801394)
chr6 (124-232)||(33690738-33690846)
chr6 (136-196)||(22424922-22424983)
chr6 (108-194)||(31086423-31086510)
chr6 (125-231)||(31418929-31419035)
chr6 (137-194)||(5017430-5017488)
chr6 (136-194)||(2973034-2973093)
chr6 (136-194)||(28137503-28137562)
chr6 (313-349)||(4045283-4045319)
chr6 (141-194)||(16567210-16567265)
[»] chr5 (26 HSPs)
chr5 (108-263)||(2630291-2630445)
chr5 (136-231)||(33030854-33030949)
chr5 (108-317)||(11181660-11181869)
chr5 (81-232)||(6741885-6742036)
chr5 (123-317)||(7160732-7160925)
chr5 (177-317)||(28832386-28832526)
chr5 (104-308)||(5611198-5611403)
chr5 (94-317)||(10281797-10282023)
chr5 (166-317)||(17003787-17003938)
chr5 (166-317)||(31300423-31300574)
chr5 (94-263)||(3880345-3880514)
chr5 (114-297)||(30899933-30900116)
chr5 (94-230)||(34842649-34842785)
chr5 (137-263)||(42127293-42127419)
chr5 (94-317)||(12084005-12084226)
chr5 (161-206)||(3651613-3651658)
chr5 (176-317)||(24553355-24553496)
chr5 (123-233)||(31336153-31336262)
chr5 (136-196)||(33831692-33831753)
chr5 (108-317)||(19588806-19589014)
chr5 (136-194)||(3075753-3075812)
chr5 (136-194)||(8566041-8566100)
chr5 (247-317)||(11916800-11916871)
chr5 (136-194)||(31182986-31183045)
chr5 (248-317)||(9353160-9353230)
chr5 (157-196)||(19806395-19806432)
[»] chr3 (45 HSPs)
chr3 (77-211)||(4386851-4386985)
chr3 (137-313)||(3328178-3328355)
chr3 (109-212)||(29100220-29100324)
chr3 (104-310)||(5366146-5366355)
chr3 (137-317)||(40592599-40592780)
chr3 (108-263)||(21353622-21353776)
chr3 (108-317)||(36029153-36029362)
chr3 (137-317)||(3323508-3323689)
chr3 (137-317)||(8126719-8126899)
chr3 (104-308)||(21156485-21156690)
chr3 (135-214)||(25517069-25517148)
chr3 (112-214)||(5797204-5797305)
chr3 (108-317)||(35925540-35925747)
chr3 (77-317)||(8370306-8370544)
chr3 (137-317)||(24694983-24695162)
chr3 (108-263)||(40844711-40844864)
chr3 (137-317)||(1417308-1417489)
chr3 (108-303)||(18552716-18552910)
chr3 (137-306)||(25795870-25796038)
chr3 (137-317)||(3715817-3716000)
chr3 (77-317)||(21711252-21711491)
chr3 (137-317)||(26299077-26299257)
chr3 (137-312)||(47923726-47923904)
chr3 (123-206)||(41163174-41163258)
chr3 (108-317)||(1736121-1736332)
chr3 (137-196)||(9666562-9666623)
chr3 (94-317)||(6794532-6794754)
chr3 (136-194)||(22835097-22835156)
chr3 (276-317)||(29196584-29196625)
chr3 (107-232)||(44658396-44658521)
chr3 (165-260)||(25929270-25929365)
chr3 (248-317)||(26928416-26928486)
chr3 (137-194)||(32891117-32891176)
chr3 (126-194)||(44700563-44700632)
chr3 (276-315)||(44700675-44700714)
chr3 (160-194)||(29196507-29196541)
chr3 (137-195)||(32744532-32744590)
chr3 (136-194)||(760861-760920)
chr3 (126-188)||(5433961-5434025)
chr3 (136-194)||(46860488-46860547)
chr3 (136-193)||(9581297-9581355)
chr3 (248-317)||(16264548-16264618)
chr3 (248-317)||(27986273-27986343)
chr3 (176-204)||(37387546-37387574)
chr3 (137-194)||(39153457-39153515)
[»] scaffold0002 (1 HSPs)
scaffold0002 (114-308)||(14748-14943)
[»] scaffold0076 (1 HSPs)
scaffold0076 (108-196)||(15937-16025)
[»] scaffold0036 (1 HSPs)
scaffold0036 (108-317)||(85743-85952)
[»] scaffold0006 (3 HSPs)
scaffold0006 (139-317)||(5774-5954)
scaffold0006 (240-317)||(2685-2763)
scaffold0006 (248-317)||(133107-133177)
[»] scaffold0078 (1 HSPs)
scaffold0078 (138-232)||(23622-23715)
[»] scaffold1444 (1 HSPs)
scaffold1444 (131-202)||(1258-1329)
[»] scaffold0176 (1 HSPs)
scaffold0176 (137-232)||(17352-17446)
[»] scaffold0148 (1 HSPs)
scaffold0148 (242-317)||(10924-11002)
[»] scaffold0129 (1 HSPs)
scaffold0129 (283-315)||(19142-19174)


Alignment Details
Target: chr1 (Bit Score: 191; Significance: 1e-103; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 186 - 424
Target Start/End: Complemental strand, 11031433 - 11031195
Alignment:
Q  186 acccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaactcattacccatggtg 285  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||| ||||    
T  11031433 acccatttttcaagtcattcacactcacaatgtatcctaagagaaaaacactaaaggaagctttttgatccttccaataatgaactcactacccacggtg 11031334  T
Q  286 tttgcaaatgtttcccaacccaagagaacctcctttgatttcttaagtttctctctcttaaagctcgctcaaaagattgaacatagaatgcttacatagt 385  Q
    ||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  11031333 tttacaaatgtttcccaacccaagagaacctcttttgatttctcaagtttctctctcttaaagctcgctcaaaaaattgaacatagaatgcttatatagt 11031234  T
Q  386 gcccaaaacctgtcaaaatcgtgtcacgataaaactcgt 424  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  11031233 gcccaaaacctgtcaaaatcgtgtcatgataaaactcgt 11031195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 11032447 - 11032268
Alignment:
Q  17 taagtaagaaaaggaagaaaacaagacaccaatattgtttgcgtagtttggtccaaaagggacctactccggaggatagagcagctatctgatccactat 116  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| | ||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  11032447 taagtaagaaaaggaagaaaacaatacaccaatattgtttacgtagttcg-tccaaaaaggacctacttcggaggatagagcaactatctgatccactat 11032349  T
Q  117 gataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttca 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11032348 gataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacataatttctacccatttttca 11032268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 35 - 260
Target Start/End: Complemental strand, 35109645 - 35109423
Alignment:
Q  35 aaacaagacaccaatattgtttgcgtagtttggtccaaaagggacctactccggaggatagagcagctatctgatccactatgataatagtgatataaag 134  Q
    |||||| ||||| ||||||||| |  |||||||||||||| | ||||| || | |||| |||  |||| |||||||||||||||||| |  |||| |||     
T  35109645 aaacaacacaccgatattgtttactcagtttggtccaaaatg-acctaatctg-aggagagacaagctctctgatccactatgataagatagatacaaat 35109548  T
Q  135 aggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaat 234  Q
    ||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||| |||||||||||| ||||||||||||  |||||| ||| |||||    
T  35109547 aggttacaagaaattagcttaaaagctcacaaagaacaaaccttaatttctacccaattttcaagtcacacacactcacaatgaatcctacgag-aaaat 35109449  T
Q  235 actataggaagctttttgatccttcc 260  Q
    |||| |||||||||||| ||||||||    
T  35109448 actaaaggaagcttttttatccttcc 35109423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 317
Target Start/End: Original strand, 22819518 - 22819700
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagag-aaaaata 235  Q
    ||||||||||||||| ||   | ||||||||||| || || ||||||||| |||||||||||||||| ||||||| ||||  |||||||||| ||||| |    
T  22819518 gttacaagaaattagctttttagctcacaaagaataagacataatttctaaccatttttcaagtcacccacactctcaatgaatcctaagagaaaaaaca 22819617  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | | ||||||||||||||||||||||||  ||||   | | |||||| ||||||| | ||||||||||||||||||||||||||    
T  22819618 caaaaggaagctttttgatccttccaatggtgaaatgtaactacccaaggtgtttac-aatgtttcccaacccaagagaacctc 22819700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 104 - 232
Target Start/End: Complemental strand, 32737037 - 32736909
Alignment:
Q  104 tctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 203  Q
    ||||||| |||||||| |  |||||| ||||||||||||| ||||||| ||||||  ||| |||||||||| |||||||||||||||||||||||||||     
T  32737037 tctgatcaactatgatgaaggtgatacaaagaggttacaaaaaattagcttaaaagttcataaagaacaaaccctaatttctacccatttttcaagtcat 32736938  T
Q  204 tcacactcacaatatatcctaagagaaaa 232  Q
      |||||||||||  ||||||||||||||    
T  32736937 cgacactcacaatgaatcctaagagaaaa 32736909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 232
Target Start/End: Complemental strand, 918515 - 918392
Alignment:
Q  110 ccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagt-cactcaca 208  Q
    |||||||||||| ||||||| |||||  |||||||||||||  ||| |||||||||||||||||| | ||||||||||||||||||||| | |||||| |    
T  918515 ccactatgataagagtgatacaaagatattacaagaaattatcttacaaactcacaaagaacaaaccataatttctacccatttttcaattccactcaaa 918416  T
Q  209 ctcacaatatatcctaagagaaaa 232  Q
    | ||||||  ||||||||||||||    
T  918415 cccacaatgaatcctaagagaaaa 918392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 165 - 317
Target Start/End: Complemental strand, 47102821 - 47102667
Alignment:
Q  165 aaagaacaaaacctaatttcta--cccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaa 262  Q
    |||||||||  |||||||||||  |||||||||||  |||||||||||| ||||  ||||||||| ||||| || | || ||||||||||||||||||||    
T  47102821 aaagaacaagtcctaatttctatacccatttttcatatcactcacactctcaatgaatcctaaga-aaaaacacaaaagaaagctttttgatccttccaa 47102723  T
Q  263 taatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | |||||  |||| |||||| ||||||| ||| ||||||||||||||||||||||||    
T  47102722 tgatgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagaacctc 47102667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 317
Target Start/End: Complemental strand, 47098833 - 47098653
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||||||||||| ||| || || ||||| ||||||  ||||||||||||||||||| ||  |||| ||||||| ||||  | ||||||| ||||| |    
T  47098833 gttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccatttt-cacatcacccacactctcaatgaaacctaaga-aaaaaca 47098736  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||||||||    
T  47098735 caaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagaacctc 47098653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 106 - 251
Target Start/End: Original strand, 10997016 - 10997159
Alignment:
Q  106 tgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactc 205  Q
    ||||||||||  |||| ||||||| ||| | ||||||||||||||  ||||||  | ||||| |||||| |||||||||||||||||||||||||||| |    
T  10997016 tgatccacta--ataagagtgatacaaatatgttacaagaaattaacttaaaagataacaaataacaaaccctaatttctacccatttttcaagtcaccc 10997113  T
Q  206 acactcacaatatatcctaagagaaaaatactataggaagcttttt 251  Q
     |||||||  |  ||||||| ||||||| |||| ||||||||||||    
T  10997114 tcactcacgttgaatcctaaaagaaaaacactaaaggaagcttttt 10997159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 310
Target Start/End: Original strand, 8281374 - 8281581
Alignment:
Q  104 tctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 203  Q
    |||||||||||||||||| | ||||| ||| | ||||||||||||||   |||   |||||||||||||||  |||||||||| | ||| || |||||||    
T  8281374 tctgatccactatgataagaatgatacaaatatgttacaagaaattaacataatcgctcacaaagaacaaattctaatttctatcaattatttaagtcac 8281473  T
Q  204 tcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataat--gaactcattacccatggtgtttgcaaatgtttccc 301  Q
     | ||||||||||  |||| ||||| |||| |||| |||||| ||||| || |||||  ||||  || |||| |||||| ||||||| |||||| |||||    
T  8281474 ccgcactcacaatgaatccaaagag-aaaacactaaaggaagtttttttattcttcctctaatgagatctcactacccaaggtgtttacaaatggttccc 8281572  T
Q  302 aacccaaga 310  Q
    ||| |||||    
T  8281573 aacacaaga 8281581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 317
Target Start/End: Complemental strand, 40816822 - 40816642
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||||||||||| ||| || || ||||| |||||| ||||||||||||| ||||| |   ||||| ||||||| ||||  ||||||||||||||  |    
T  40816822 gttacaagaaattagcttataagcttacaaaagaacaagacctaatttctactcatttgt---gtcacccacactctcaatgaatcctaagagaaaac-a 40816727  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 317  Q
    | | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||||  ||||||||||||    
T  40816726 caaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 40816642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 206
Target Start/End: Original strand, 3019791 - 3019888
Alignment:
Q  109 tccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||||||||  ||||||  ||||||||| |||||||| | ||| ||||||||||||||||    |||||||||||| |||||||||||||||||    
T  3019791 tccactatgataaacgtgatacgaagaggttataagaaatttgcttacaaactcacaaagaacattttctaatttctaccaatttttcaagtcactca 3019888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 313 - 413
Target Start/End: Complemental strand, 3460605 - 3460505
Alignment:
Q  313 acctcctttgatttcttaagtttctctctcttaaagctcg-ctcaaaagattgaacatagaatgcttacatagtgcccaaaacctgtcaaaatcgtgtca 411  Q
    ||||||||| |||| ||||||||||| ||||| ||||||  |||||||||| |||||| ||||||||| |||||||| | ||||||||||||| ||||||    
T  3460605 acctcctttaattttttaagtttctccctcttgaagctctactcaaaagat-gaacattgaatgcttatatagtgcctacaacctgtcaaaattgtgtca 3460507  T
Q  412 cg 413  Q
    ||    
T  3460506 cg 3460505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 139 - 232
Target Start/End: Complemental strand, 17345525 - 17345432
Alignment:
Q  139 tacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa 232  Q
    |||||||||||||  ||| | | |||||||||||||||||||||||||||||||||| ||||||| |||||||  |||  ||| ||||||||||    
T  17345525 tacaagaaattagcataagagcccacaaagaacaaaacctaatttctacccattttttaagtcacccacactcttaatgaatcttaagagaaaa 17345432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 108 - 317
Target Start/End: Complemental strand, 16124553 - 16124342
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||    || || ||    
T  16124553 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacataagaacaagacctaatttctacccattttgt--gttaccca 16124456  T
Q  207 cactcacaatat---atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccc 301  Q
    ||||  |||||    ||||||||||||||  || | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||    
T  16124455 cactttcaataatgaatcctaagagaaaac-acaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttccc 16124358  T
Q  302 aacccaagagaacctc 317  Q
    ||||||||||| ||||    
T  16124357 aacccaagagatcctc 16124342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 317
Target Start/End: Original strand, 19073017 - 19073199
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcac-aatatatcctaagagaaaaat 234  Q
    ||||||||||||||| ||| || || ||||| |||||| ||||||||||||||||||||    ||||||||||||| | |||  | |||||||| ||||     
T  19073017 gttacaagaaattagcttataagcttacaaaagaacaatacctaatttctacccatttt--gtgtcactcacactctcaaatgaaccctaagag-aaaac 19073113  T
Q  235 actataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 317  Q
    || | ||||||||||||||||||||||||  ||||  |||| || ||| ||||||| | ||||||||||||||  ||||||||||||    
T  19073114 acaaaaggaagctttttgatccttccaatggtgaaatctcactatccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 19073199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 317
Target Start/End: Original strand, 19120907 - 19121089
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcac-aatatatcctaagagaaaaat 234  Q
    ||||||||||||||| ||| || || ||||| |||||| ||||||||||||||||||||    ||||||||||||| | |||  | |||||||| ||||     
T  19120907 gttacaagaaattagcttataagcttacaaaagaacaatacctaatttctacccatttt--gtgtcactcacactctcaaatgaaccctaagag-aaaac 19121003  T
Q  235 actataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 317  Q
    || | ||||||||||||||||||||||||  ||||  |||| || ||| ||||||| | ||||||||||||||  ||||||||||||    
T  19121004 acaaaaggaagctttttgatccttccaatggtgaaatctcactatccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 19121089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 317
Target Start/End: Complemental strand, 47704004 - 47703761
Alignment:
Q  77 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaa 175  Q
    |||||| || || ||| ||||||||| ||  |||||||||||| | |||| || |||    |||||||||||||| ||| || || ||| |||||||| |    
T  47704004 gacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagaattacaagaaattagcttacaagcttacacaagaacaaga 47703905  T
Q  176 cctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ct 271  Q
    |||||||||||||||||||    ||||| ||| ||||||||||  |||||||||| |||| || | |||||| ||||| ||| |||||||  ||||  ||    
T  47703904 cctaatttctacccatttt--gtgtcacccactctcacaatatgaatcctaagag-aaaacacaaaaggaagtttttttatcattccaatggtgaaatct 47703808  T
Q  272 cattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 317  Q
    || |||||| ||||||| | ||||||||||||||  ||||||||||||    
T  47703807 cactacccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 47703761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 144 - 308
Target Start/End: Complemental strand, 25116702 - 25116537
Alignment:
Q  144 gaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactca-caatatatcctaagagaaaaatactatagg 242  Q
    |||||||| |||||||||||||||||| ||  |||||||| |||||  |||||||||||  ||||||||  |||| ||| |||||| |||| |||| ||     
T  25116702 gaaattagcttaaaaactcacaaagaagaacccctaatttttaccc--ttttcaagtcatccacactcataaataaatcttaagag-aaaacactaaaga 25116606  T
Q  243 aagctttttgatccttccaataatgaa--ctcattaccc-atggtgtttgcaaatgtttcccaacccaa 308  Q
    ||  ||||| ||||||| |||||||||  |||| ||||| |  |||||| |||||||||||||||||||    
T  25116605 aatttttttaatccttcaaataatgaaatctcactaccctaatgtgtttacaaatgtttcccaacccaa 25116537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 317
Target Start/End: Original strand, 29651901 - 29652082
Alignment:
Q  138 ttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat---atcctaagagaaaaa 233  Q
    |||||||||||||  ||| || || ||| |||||||| ||||||||||||||||||||    ||||| ||||||| |||||    ||||||||||||||     
T  29651901 ttacaagaaattaacttataagcttacacaagaacaagacctaatttctacccattttgt--gtcacccacactctcaataatgaatcctaagagaaaac 29651998  T
Q  234 tactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
     || | ||||| ||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||||||| ||| ||||    
T  29651999 -acaaaaggaaactttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccaaaagatcctc 29652082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 317
Target Start/End: Original strand, 9476350 - 9476531
Alignment:
Q  137 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaa 233  Q
    |||| |||||||||| ||| || || ||| |||||||| |||||||||||| |||||||    ||||||||| |||||||| |  ||| ||||||||||     
T  9476350 gttataagaaattagcttacaagcttacacaagaacaagacctaatttctatccattttgt--gtcactcactctcacaatgtgaatcttaagagaaaac 9476447  T
Q  234 tactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
     || | |||||||||||||||||||| |||  ||||  |||| |||||| | ||||| ||| |||||||||||| |||||||||||    
T  9476448 -acaaaaggaagctttttgatccttcaaatggtgaaatctcactacccaagatgtttacaa-tgtttcccaaccaaagagaacctc 9476531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 9023876 - 9023785
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaag 199  Q
    |||||||| ||| | ||||||| |||  || ||||| |||||||  ||||| ||||||||||| || |||||||||||||||| ||||||||    
T  9023876 atccactaagatgaaagtgatacaaatgggatacaataaattagcataaaagctcacaaagaataagacctaatttctacccacttttcaag 9023785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 317
Target Start/End: Original strand, 13598489 - 13598669
Alignment:
Q  139 tacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaat-at--atcctaagagaaaaat 234  Q
    ||||||||||||| ||| || || ||| |||||||| || |||||||||| ||||||    ||||| ||||||| |||| ||  ||||||||||||||      
T  13598489 tacaagaaattagcttataagcttacacaagaacaagacttaatttctactcattttgt--gtcacccacactctcaatgatgaatcctaagagaaaac- 13598585  T
Q  235 actataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    || | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||| ||||||||||||| ||||    
T  13598586 acaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttgccaacccaagagatcctc 13598669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 317
Target Start/End: Complemental strand, 9022857 - 9022734
Alignment:
Q  192 ttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttg 289  Q
    |||||||||||  ||||||||||||  |||||||||||||   |||  |||||||||||| |||||||||||  ||||  |||| |||  | |||||||     
T  9022857 ttttcaagtcaaccacactcacaatgaatcctaagagaaa---actcaaggaagcttttttatccttccaatggtgaaatctcactacgaaaggtgttta 9022761  T
Q  290 caaatgtttcccaacccaagagaacctc 317  Q
    | |||||||| |||||||||||||||||    
T  9022760 c-aatgtttctcaacccaagagaacctc 9022734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 32889558 - 32889624
Alignment:
Q  166 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa 232  Q
    ||||||||  ||||||||||||||||||||||  |||| ||||||| ||||  ||||||||||||||    
T  32889558 aagaacaagtcctaatttctacccatttttcatatcacccacactctcaatgaatcctaagagaaaa 32889624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 6628910 - 6628963
Alignment:
Q  178 taatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaa 231  Q
    |||||||||| |||||||||||||| ||| | |||||||| |||||||||||||    
T  6628910 taatttctactcatttttcaagtcattcaaagtcacaatagatcctaagagaaa 6628963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 8550883 - 8550941
Alignment:
Q  137 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    ||||||||||||||| ||||| |  ||||||||||||||| |||||||||||||||||||    
T  8550883 gttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccatttt 8550941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 201
Target Start/End: Original strand, 37918719 - 37918810
Alignment:
Q  108 atccactatgataata-gtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtc 201  Q
    ||||||||||| |||| |||||| ||||| ||||||||||||||||||  || |||| |||||||    ||||| ||||||| ||||||||||||    
T  37918719 atccactatgaaaataagtgatacaaagatgttacaagaaattagatttcaagctcataaagaac---ccctaaattctacctatttttcaagtc 37918810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 8871143 - 8871197
Alignment:
Q  136 ggttacaagaaattagattaaa--aactcacaaagaacaaaacctaatttctacc 188  Q
    |||||||||||||||| || ||  ||||||||||||||||| |||||||||||||    
T  8871143 ggttacaagaaattagcttcaacgaactcacaaagaacaaaccctaatttctacc 8871197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 34603649 - 34603589
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccattttt 195  Q
    |||||||||||||||| ||||| |  ||||||||||||||  ||||||||||||||||||||    
T  34603649 ggttacaagaaattagcttaaacaagctcacaaagaacaac-cctaatttctacccattttt 34603589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 313
Target Start/End: Original strand, 928174 - 928211
Alignment:
Q  276 acccatggtgtttgcaaatgtttcccaacccaagagaa 313  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  928174 acccaaggtgtttacaaatgtttcccaacccaagagaa 928211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 37168370 - 37168311
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||||||| ||||| |  ||||||||||||||  |||||||||||||||||||    
T  37168370 ggttacaagaaattagcttaaacaagctcacaaagaacaac-cctaatttctacccatttt 37168311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 41360987 - 41360928
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||||||| || || |  ||||||||||||||| |||||||||||||||||||    
T  41360987 ggttacaagaaattagtttcaacaagctcacaaagaacaaa-cctaatttctacccatttt 41360928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 48382518 - 48382441
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttct 185  Q
    ||||| |||||| | ||||||| ||| ||||||||||||||||  ||| ||  ||||||||| |||| ||||||||||    
T  48382518 atccaatatgatgaaagtgatacaaataggttacaagaaattaacttacaagttcacaaagatcaaaccctaatttct 48382441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 317
Target Start/End: Original strand, 3281906 - 3281976
Alignment:
Q  248 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  3281906 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 3281976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 7482326 - 7482384
Alignment:
Q  136 ggttacaagaaattagattaa--aaactcacaaagaacaaaacctaatttctacccattt 193  Q
    |||||||||||||||| ||||  || |||||||||||| || ||||||||||||||||||    
T  7482326 ggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctacccattt 7482384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 317
Target Start/End: Complemental strand, 13604520 - 13604450
Alignment:
Q  248 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  13604520 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 13604450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 317
Target Start/End: Original strand, 37069966 - 37070036
Alignment:
Q  248 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||||||||||||||  ||||  ||||||| ||| ||||||| ||| ||||||||||||||||||| ||||    
T  37069966 ttttgatccttccaatggtgaaatctcattatccaaggtgtttacaa-tgtttcccaacccaagagatcctc 37070036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 2e-44; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 77 - 232
Target Start/End: Complemental strand, 9054905 - 9054750
Alignment:
Q  77 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaac 176  Q
    ||||||||| |||||| ||||||||| ||| |||||||| ||| | ||||||| |||| |||||||||||||||| |||||| | ||||||||||||||     
T  9054905 gacctactctggaggagagagcagctctctaatccactaagatgaaagtgatacaaagtggttacaagaaattagcttaaaagcgcacaaagaacaaaat 9054806  T
Q  177 ctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa 232  Q
    ||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  9054805 ctaatttctacccatttttcaagtcactcacactctcaatgaatcctaagagaaaa 9054750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 108 - 317
Target Start/End: Complemental strand, 7493210 - 7493001
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 207  Q
    |||||||| ||| | ||||||| ||||| |||| |||||||||   ||||| |||||| ||||||||||||||||||||||  ||||||||||||| |||    
T  7493210 atccactaagatgaaagtgatacaaagaagttataagaaattaacataaaagctcacacagaacaaaacctaatttctacctgtttttcaagtcacccac 7493111  T
Q  208 actcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacc 305  Q
    |||| ||||| ||||||||| ||||| |||| |||||||||||||||||||| |||  ||||  |||| |||||| ||||||| | |||||||||||| |    
T  7493110 actctcaataaatcctaaga-aaaaacactaaaggaagctttttgatccttctaattgtgaaatctcactacccaaggtgtttac-aatgtttcccaatc 7493013  T
Q  306 caagagaacctc 317  Q
    ||||||||||||    
T  7493012 caagagaacctc 7493001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 78 - 315
Target Start/End: Original strand, 3051150 - 3051387
Alignment:
Q  78 acctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacc 177  Q
    |||| ||| |||||| |||||| || ||  |||||||| ||| | ||||||| |||   |||||||||||||||  ||| | |||||||||||||||||     
T  3051150 acctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaact 3051249  T
Q  178 taatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcatt 275  Q
    |||||||||||||||||||| |||||| |||||| ||||  |||||||||||||   || | |||||||||||||||| |||||||  ||||  |||| |    
T  3051250 taatttctacccatttttcatgtcacttacactctcaatgaatcctaagagaaagc-acaaaaggaagctttttgatctttccaatggtgaaatctcact 3051348  T
Q  276 acccatggtgtttgcaaatgtttcccaacccaagagaacc 315  Q
    ||||| | ||||| | ||||||||||||| ||||||||||    
T  3051349 acccaagatgtttac-aatgtttcccaactcaagagaacc 3051387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 317
Target Start/End: Complemental strand, 5702491 - 5702308
Alignment:
Q  137 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat---atcctaagagaaaa 232  Q
    ||||||||||||||| ||| || || ||| |||| ||||||||||||||||||||||||   |||||| ||||||| |||||    ||||||||||||||    
T  5702491 gttacaagaaattagcttataagcttacacaagagcaaaacctaatttctacccattttg--agtcacccacactctcaataatgaatcctaagagaaaa 5702394  T
Q  233 atactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | || | |||||||||||||||| |||||||  ||||  |||| |||||| ||||||| | ||| ||||||||||||||||| ||||    
T  5702393 acacaaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttac-aatatttcccaacccaagagatcctc 5702308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 123 - 253
Target Start/End: Complemental strand, 5990583 - 5990454
Alignment:
Q  123 agtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcc 222  Q
    ||||||| ||||| ||||||||||||||| |||||| |||||||||||||  |||| ||||  |||||||||||||||||| ||||||  ||||  ||||    
T  5990583 agtgatacaaagatgttacaagaaattagcttaaaagctcacaaagaacacgacctcattttcacccatttttcaagtcacccacactttcaatgaatcc 5990484  T
Q  223 taagagaaaaatactataggaagctttttga 253  Q
    |||||| |||| |||| || |||||||||||    
T  5990483 taagag-aaaacactaaagaaagctttttga 5990454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 166 - 317
Target Start/End: Complemental strand, 19752372 - 19752222
Alignment:
Q  166 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataa 265  Q
    ||||||||  ||||||||||||||||||||||  |||| ||||||| ||||  ||||||||||||||  || | |||||||||||||||||||||||| |    
T  19752372 aagaacaagtcctaatttctacccatttttcatatcacccacactctcaatgaatcctaagagaaaac-acaa-aggaagctttttgatccttccaatga 19752275  T
Q  266 tgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||  |||| |||||| ||||||| | ||| |||| |||||||||||||||||    
T  19752274 tgaaatctcactacccaaggtgtttac-aatatttcacaacccaagagaacctc 19752222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 8863664 - 8863562
Alignment:
Q  106 tgatccactatgataat-agtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcact 204  Q
    ||||||||||||| ||  ||||||| ||||||||||||||||||||  |||||| ||||||  ||||||| | |||||||||||||||||||||||||||    
T  8863664 tgatccactatgagaaagagtgatacaaagaggttacaagaaattaacttaaaagctcaca--gaacaaaccttaatttctacccatttttcaagtcact 8863567  T
Q  205 cacac 209  Q
    |||||    
T  8863566 cacac 8863562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 94 - 209
Target Start/End: Original strand, 6813729 - 6813845
Alignment:
Q  94 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaa-tttctacccatt 192  Q
    ||||||||| ||  ||||| || ||| | ||||| | |||| |||||||||||||||| ||  || ||||||||||||||||||||| ||||||||||||    
T  6813729 agagcagctctccaatccaataagatgaaagtgacacaaaggggttacaagaaattagcttgcaagctcacaaagaacaaaacctaattttctacccatt 6813828  T
Q  193 tttcaagtcactcacac 209  Q
    |||||||||||||||||    
T  6813829 tttcaagtcactcacac 6813845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 315
Target Start/End: Original strand, 28307649 - 28307829
Alignment:
Q  136 ggttacaagaaattagattaaaaa-ctcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaat 234  Q
    |||||||||||||||| || |||| |||| ||||||||| ||||| ||||||| ||||| ||||||||| ||||||| || |  ||||||| ||||||      
T  28307649 ggttacaagaaattagttttaaaagctcataaagaacaagacctactttctacacatttctcaagtcacccacactctcactgaatcctaaaagaaaac- 28307747  T
Q  235 actataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacc 315  Q
    || | || ||||||||| |||||||||||  ||||  |||| |||||| ||||||  ||| |||||||||||| |||||||||    
T  28307748 acaaaagaaagcttttttatccttccaattgtgaaatctcactacccaaggtgttaacaa-tgtttcccaacctaagagaacc 28307829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 123 - 232
Target Start/End: Complemental strand, 34477241 - 34477135
Alignment:
Q  123 agtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcc 222  Q
    ||||||| |||||||||| |||||||||  ||| |||||||||||||||||   |||||||| ||||||||||||||||||||| |  ||||||  ||||    
T  34477241 agtgatacaaagaggttaaaagaaattaacttacaaactcacaaagaacaa---ctaatttcgacccatttttcaagtcactcaaatccacaatgaatcc 34477145  T
Q  223 taagagaaaa 232  Q
     |||||||||    
T  34477144 aaagagaaaa 34477135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 11772001 - 11772098
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||||||||| ||||||| |||||||||| |||||||||| ||| ||  |||||||||||| | |||||| | ||||| ||||||||||||||||    
T  11772001 atccactatgataagagtgatacaaagaggttaaaagaaattagtttacaagttcacaaagaacatatcctaatat-tacccttttttcaagtcactca 11772098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 317
Target Start/End: Complemental strand, 4696615 - 4696436
Alignment:
Q  137 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||||||||||| ||| || || ||  |||||||| ||||||||||||||||||||    ||||| ||||||| || |  |||||||||| |||| |    
T  4696615 gttacaagaaattagcttataagcttacgcaagaacaagacctaatttctacccatttt--gtgtcacccacactctcattgaatcctaagag-aaaaca 4696519  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | | |||||||||||||||| |||||||  ||||  |||| |||||| ||||||| | ||||||||||||||||||||| ||||    
T  4696518 caaaaggaagctttttgatctttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccaagagatcctc 4696436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 166 - 317
Target Start/End: Complemental strand, 26403208 - 26403055
Alignment:
Q  166 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaat 263  Q
    |||||||| ||||||||||||||||||||    ||||||||| ||||||||||  ||| |||||| |||| || | ||||||||||||||||||||||||    
T  26403208 aagaacaagacctaatttctacccatttt--gtgtcactcactctcacaatatgaatcataagag-aaaacacaaaaggaagctttttgatccttccaat 26403112  T
Q  264 aatgaa--ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 317  Q
      ||||  |||| |||||| ||||||| | ||||||||||||||  ||||||||||||    
T  26403111 ggtgaaatctcactacccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 26403055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 232
Target Start/End: Original strand, 14601223 - 14601347
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 207  Q
    ||||||||  |||||| ||||| |||||||||||| ||||||||  || || | ||||||||||  | |||||||| |||| |||||||||||||||||     
T  14601223 atccactacaataataatgatacaaagaggttacacgaaattagcgtataagcccacaaagaacgtatcctaatttttacctatttttcaagtcactcaa 14601322  T
Q  208 actcacaatatatcctaagagaaaa 232  Q
    || ||| ||  |||||| |||||||    
T  14601323 acgcacgatgaatcctatgagaaaa 14601347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 33503855 - 33503755
Alignment:
Q  131 aaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcaca-atatatcctaagaga 229  Q
    |||||||||| |||||||||| | | || | | ||||| |||| |||||||||||||||||||||||||||||||| || |||| | | |||||||||||    
T  33503855 aaagaggttaaaagaaattagctcacaagccctcaaagcacaatacctaatttctacccatttttcaagtcactcaaacccacatagagatcctaagaga 33503756  T
Q  230 a 230  Q
    |    
T  33503755 a 33503755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 232
Target Start/End: Complemental strand, 42093188 - 42093092
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacac-tcacaatatatcctaagagaaaa 232  Q
    ||||||||||||||| ||| |||||||||||||||| | | ||||||||||| ||||||||||| ||| | || |||||||   |||||||||||||    
T  42093188 gttacaagaaattagcttacaaactcacaaagaacatatcataatttctacctatttttcaagttacttagacttcacaatgattcctaagagaaaa 42093092  T

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Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 232
Target Start/End: Complemental strand, 31513367 - 31513245
Alignment:
Q  104 tctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 203  Q
    |||||||||||||||||| | | ||  ||||||||||||| ||||||| |||     |||||||||||||| ||||||||||||| ||||| | |||||     
T  31513367 tctgatccactatgataagaattatgaaaagaggttacaaaaaattagcttat----tcacaaagaacaaa-cctaatttctacctatttt-cgagtcat 31513274  T
Q  204 tcacactcacaatatatcctaagagaaaa 232  Q
     ||||||||||||  ||||||||||||||    
T  31513273 ccacactcacaatgaatcctaagagaaaa 31513245  T

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Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 87 - 317
Target Start/End: Complemental strand, 23799635 - 23799404
Alignment:
Q  87 ggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttct 185  Q
    |||||| ||||||||  ||  |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| |||||||||||    
T  23799635 ggaggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagcttacacaagaacaagacctaatttct 23799536  T
Q  186 acccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccat 281  Q
    |||||||||    ||||| |||  |||||||||  |||||||| | |||| || | ||||||||||||||||||||||||  ||||  |||  ||| ||     
T  23799535 acccatttt--gtgtcacccactgtcacaatatgaatcctaag-ggaaaacacaaaaggaagctttttgatccttccaatggtgaaatctccctactcaa 23799439  T
Q  282 ggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||||| | |||||| |||||||||||||| ||||    
T  23799438 ggtgtttac-aatgttccccaacccaagagatcctc 23799404  T

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Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 6127267 - 6127437
Alignment:
Q  94 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatt 192  Q
    ||||||||| ||  |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||||| |||||| ||||||||||||||||||    
T  6127267 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacaaaagaacaagacctaatttctacccatt 6127366  T
Q  193 tttcaagtcactcacactcacaata---tatcctaagagaaaaatactataggaagctttttgatccttccaat 263  Q
    ||    ||||| ||||||| |||||    |||||||||| |||| || | || |||||||||||||||||||||    
T  6127367 tt--gtgtcacccacactctcaataatgaatcctaagag-aaaacacaaaagaaagctttttgatccttccaat 6127437  T

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Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 30291679 - 30291620
Alignment:
Q  137 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    ||||||||||||||| || || |  |||||||||||||||||||||||||||||||||||    
T  30291679 gttacaagaaattagcttcaacaagctcacaaagaacaaaacctaatttctacccatttt 30291620  T

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Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 37021020 - 37021105
Alignment:
Q  131 aaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaat 216  Q
    ||||||| ||||||||||||||| | || ||||| ||||| ||| | |||||||||||  ||| |||||||| ||| |||||||||    
T  37021020 aaagaggatacaagaaattagatcacaatctcacgaagaataaaccataatttctaccattttgtcaagtcagtcaaactcacaat 37021105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 40328851 - 40328793
Alignment:
Q  137 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    ||||||||||||||| ||||| |  ||||||||||||||| |||||||||||||||||||    
T  40328851 gttacaagaaattagtttaaacaagctcacaaagaacaaa-cctaatttctacccatttt 40328793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 41364943 - 41365001
Alignment:
Q  137 gttacaagaaattagattaaa--aactcacaaagaacaaaacctaatttctacccatttt 194  Q
    ||||||||||||||| |||||  |||||||||||||| |||||||||||||||| |||||    
T  41364943 gttacaagaaattagcttaaacaaactcacaaagaac-aaacctaatttctaccaatttt 41365001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 318
Target Start/End: Original strand, 3318745 - 3318787
Alignment:
Q  276 acccatggtgtttgcaaatgtttcccaacccaagagaacctcc 318  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||    
T  3318745 acccaaggtgttttcaaatgtttcctaacccaagagaacctcc 3318787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 11384057 - 11383997
Alignment:
Q  137 gttacaagaaattagattaaa--aactcacaaagaacaaaacctaatttctacccatttttc 196  Q
    ||||||||||||||| || ||  ||||||||||||||||  |||||||||||||||||||||    
T  11384057 gttacaagaaattagcttcaacaaactcacaaagaacaac-cctaatttctacccatttttc 11383997  T

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Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 19491794 - 19491853
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||||||| || || |  ||||||||||||||| |||||||||||||||||||    
T  19491794 ggttacaagaaattagtttcaacaagctcacaaagaacaaa-cctaatttctacccatttt 19491853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 28388061 - 28388106
Alignment:
Q  125 tgatataaagaggttacaagaaattagattaaaaactcacaaagaa 170  Q
    ||||| |||||||||||||||||||||||   ||||||||||||||    
T  28388061 tgatacaaagaggttacaagaaattagatctcaaactcacaaagaa 28388106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 33079743 - 33079788
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagat 153  Q
    ||||||||||| | |||||||| || ||||||||||||||||||||    
T  33079743 atccactatgaaattagtgatacaaggaggttacaagaaattagat 33079788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 3303766 - 3303824
Alignment:
Q  137 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    ||||||||||||||| ||||| |  ||||||||||||||| | |||||||||||||||||    
T  3303766 gttacaagaaattaggttaaacaagctcacaaagaacaaa-cttaatttctacccatttt 3303824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 8153665 - 8153629
Alignment:
Q  313 acctcctttgatttcttaagtttctctctcttaaagc 349  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  8153665 acctcctttgatttcctaaatttctctctcttaaagc 8153629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 317
Target Start/End: Complemental strand, 19175652 - 19175582
Alignment:
Q  248 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||||||||||||||| ||||  |||| |||||| ||||||| ||| |||||||||| |||||||| ||||    
T  19175652 ttttgatccttccaatagtgaaatctcactacccaaggtgtttacaa-tgtttcccaatccaagagatcctc 19175582  T

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Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 37043658 - 37043731
Alignment:
Q  135 aggttacaagaaattagattaaaaactcacaaagaacaaaacc---taatttctacccatttttcaagtcactca 206  Q
    ||||| |||||||||||||   || ||||||||||||||| ||   |||||| ||||||||||||||||||||||    
T  37043658 aggttgcaagaaattagatctcaagctcacaaagaacaaacccagttaattt-tacccatttttcaagtcactca 37043731  T

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Target: chr2 (Bit Score: 92; Significance: 2e-44; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 22 - 310
Target Start/End: Complemental strand, 28770896 - 28770608
Alignment:
Q  22 aagaaaaggaagaaaacaagacaccaatattgtttgcgtagtttggtccaaaagggacctactccggaggatagagcagctatctgatccactatgataa 121  Q
    ||||| || ||| |||||||||||||||||| ||| | || |  |||| ||||  ||||||||| |||||||||||||||| || ||||| ||| |||||    
T  28770896 aagaagagaaaggaaacaagacaccaatattttttaccta-tacggtctaaaaatgacctactctggaggatagagcagctctccgatcctctacgataa 28770798  T
Q  122 tagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatc 221  Q
     | ||||| |||||  |||||||||||||| |||||| |||||||||||||||  ||||||||||||||||||||||||||  ||||||| ||||  |||    
T  28770797 gaatgatacaaagatattacaagaaattagcttaaaagctcacaaagaacaaactctaatttctacccatttttcaagtcatacacactcgcaatgaatc 28770698  T
Q  222 ctaagagaaaaatactataggaagctttttgatccttccaataat--gaactcattacccatggtgtttgcaaatgtttcccaacccaaga 310  Q
    ||||||| |||| |||| ||||| |||||| |||||||   ||||  || |||| |||||| ||||||| ||||||||| |||||| ||||    
T  28770697 ctaagag-aaaacactaaaggaaacttttttatccttcagctaatgagatctcactacccaaggtgtttacaaatgttttccaaccaaaga 28770608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 317
Target Start/End: Complemental strand, 2869812 - 2869520
Alignment:
Q  26 aaaggaagaaaacaag-acaccaatattgtttgcgtagtttggtccaaaagggacctactccggaggatagagcagctatctgatccactatgataatag 124  Q
    ||||||||| |||||  ||||||||||||||| |  |||| ||||||| | | ||||||||  | ||| |||| |||| ||  |||||||| ||| | ||    
T  2869812 aaaggaagagaacaaacacaccaatattgtttacccagttcggtccaatatg-acctactctaggggagagagtagctctccaatccactaagatgaaag 2869714  T
Q  125 tgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaa-cctaatttctacccatttttcaagtcactcacactcacaatatatcct 223  Q
    ||||| ||||  ||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||  |||||    
T  2869713 tgatacaaaggagttacaagaaattagcttaaaagctcacaaagaacaaaaacctaatttctacccatttttcaagtcacccacactctcaatgaatcct 2869614  T
Q  224 aagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||| |||| ||||  |||||||||||||| ||||||||   |||  |||| ||||||  |||||| | ||||||| ||||| ||||||||||||    
T  2869613 aagag-aaaacactaacggaagctttttgattcttccaatggcgaaatctcactacccaatgtgtttac-aatgttttccaactcaagagaacctc 2869520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 94 - 310
Target Start/End: Complemental strand, 18674452 - 18674235
Alignment:
Q  94 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccattt 193  Q
    ||||||||| || |||| ||||||| || |||||||  ||| |||||||||||||||| |||||| ||||||||||||||| | ||||||||| ||||||    
T  18674452 agagcagctctccgatctactatgacaagagtgataccaaggggttacaagaaattagtttaaaagctcacaaagaacaaaccataatttctatccattt 18674353  T
Q  194 ttcaagtcactcacactca-caatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgc 290  Q
    |||||||||| ||||||||  |||  ||| |||||| |||| | || ||||||||||||||||||| ||||||||||  |||| | | || ||||||| |    
T  18674352 ttcaagtcacccacactcataaatgaatcataagag-aaaacattaaaggaagctttttgatcctt-caataatgaaatctcactgctcaaggtgtttac 18674255  T
Q  291 aaatgtttcccaacccaaga 310  Q
     |||||||||||||||||||    
T  18674254 gaatgtttcccaacccaaga 18674235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 108 - 317
Target Start/End: Complemental strand, 15903926 - 15903718
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 207  Q
    |||||||| ||||| ||||||| |||| ||||||||||||| || ||| || |||||||||||||||  ||||||||||||||||||||||||||| |||    
T  15903926 atccactaagataaaagtgatacaaaggggttacaagaaat-agcttacaagctcacaaagaacaaattctaatttctacccatttttcaagtcacccac 15903828  T
Q  208 actcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacc 305  Q
    |||| ||||  |||||| |||||||  || | || || |||||| ||| |||||||  ||||  ||||||| |||  |||||| ||| ||||||| ||||    
T  15903827 actctcaatgaatcctatgagaaaac-acaaaagaaatcttttttatcattccaatggtgaaatctcattatccaatgtgtttacaa-tgtttcctaacc 15903730  T
Q  306 caagagaacctc 317  Q
    ||||||||||||    
T  15903729 caagagaacctc 15903718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 143 - 317
Target Start/End: Original strand, 40015020 - 40015194
Alignment:
Q  143 agaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactatag 241  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||| |||||| || ||||| ||||||| ||||| ||||||||| ||||  || | ||    
T  40015020 agaaattagcttaaaaactcacaaaagaacaagacctaatttctactcatttt-catgtcacccacactctcaataaatcctaaga-aaaatcacaaaag 40015117  T
Q  242 gaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||||||||||||||||||||  ||||  |||| || |||  |||||| | ||||||||||||||||||||||||||    
T  40015118 gaagctttttgatccttccaatggtgaaatctcactatccaatgtgtttac-aatgtttcccaacccaagagaacctc 40015194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 131 - 313
Target Start/End: Original strand, 3278084 - 3278266
Alignment:
Q  131 aaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaa 230  Q
    |||||||||| |||||||||| |||||| ||||||| |||||||  |  |||||| | |||||||||| |||||||||||||||||  | |||||||| |    
T  3278084 aaagaggttataagaaattagcttaaaacctcacaa-gaacaaattccgatttcttctcatttttcaattcactcacactcacaatgaaccctaagag-a 3278181  T
Q  231 aaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaa 313  Q
    |||  ||| |||||| |||||||||| ||| ||||||||  |||| || ||| ||||||| ||||||||| ||||||||||||||    
T  3278182 aaacgctaaaggaagttttttgatccgtcctataatgaaatctcactatccaaggtgtttacaaatgttttccaacccaagagaa 3278266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 26 - 166
Target Start/End: Complemental strand, 16388589 - 16388449
Alignment:
Q  26 aaaggaagaaaacaagacaccaatattgtttgcgtagtttggtccaaaagggacctactccggaggatagagcagctatctgatccactatgataatagt 125  Q
    |||||| |||||||| ||||||||||||||| |  ||||||||||||||  |||||||||  ||||| ||||||||| ||   |||||| |||||| ||     
T  16388589 aaaggaggaaaacaacacaccaatattgtttacccagtttggtccaaaaatgacctactctagaggagagagcagctctcctttccactttgataagaga 16388490  T
Q  126 gatataaagaggttacaagaaattagattaaaaactcacaa 166  Q
    |||| ||||||||||||||||||||| |||||| |||||||    
T  16388489 gatagaaagaggttacaagaaattagcttaaaagctcacaa 16388449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 317
Target Start/End: Complemental strand, 14699016 - 14698837
Alignment:
Q  137 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||    ||||| ||||||| ||||  ||||||||||||||  |    
T  14699016 gttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccattttgt--gtcacccacactctcaatgaatcctaagagaaaac-a 14698920  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | | ||||||||||||||||||||||||| ||||  |||| |||||| ||||||| | ||||||||||||||| ||||| ||||    
T  14698919 caaaaggaagctttttgatccttccaatagtgaaatctcactacccaaggtgtttac-aatgtttcccaacccgagagatcctc 14698837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 77 - 233
Target Start/End: Complemental strand, 27149362 - 27149206
Alignment:
Q  77 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaac 176  Q
    ||||||||  || ||| ||||||||| ||  ||||||||| || | ||||||| |||| ||| |||||||||||  |||||| |||||||||||||| ||    
T  27149362 gacctactatgggggagagagcagctctccaatccactataatgaaagtgatacaaaggggtaacaagaaattaccttaaaagctcacaaagaacaagac 27149263  T
Q  177 ctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaa 233  Q
     ||| |||||||  ||||| ||||||| ||||||||||||  |||||||||||||||    
T  27149262 ttaacttctacctgttttttaagtcacccacactcacaatgaatcctaagagaaaaa 27149206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 77 - 306
Target Start/End: Original strand, 8040089 - 8040322
Alignment:
Q  77 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaa-gag-gttacaagaaattagattaaaaactcaca-aagaacaa 173  Q
    |||||| || || ||| ||||||||| ||  |||||||||||| | |||| || ||| ||| ||||||||||||||| ||| || || ||| ||||||||    
T  8040089 gacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagagttacaagaaattagcttacaagcttacacaagaacaa 8040188  T
Q  174 aacctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa-- 269  Q
     ||||||||||||||||||||    ||||| ||| ||||||||||  ||||||||||||||| |  | ||||||||||||||||||||||||  ||||      
T  8040189 gacctaatttctacccattttgt--gtcacccactctcacaatatgaatcctaagagaaaaacataaaaggaagctttttgatccttccaatggtgaaat 8040286  T
Q  270 ctcattacccatggtgtttgcaaatgtttcccaaccc 306  Q
    |||| |||||| ||||||| | |||||||||||||||    
T  8040287 ctcactacccaaggtgtttac-aatgtttcccaaccc 8040322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 108 - 232
Target Start/End: Original strand, 35397572 - 35397694
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 207  Q
    |||||||| ||| | ||||||||||||||||||| | ||||||| ||||||  ||| |||||||||| ||||||||||| |||||||||||||||| |||    
T  35397572 atccactaagatgaaagtgatataaagaggttacga-aaattagcttaaaaggtcataaagaacaaa-cctaatttctatccatttttcaagtcacccac 35397669  T
Q  208 actcacaatatatcctaagagaaaa 232  Q
    | || ||||  ||||||||||||||    
T  35397670 aatctcaatgaatcctaagagaaaa 35397694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 166 - 317
Target Start/End: Original strand, 34388969 - 34389120
Alignment:
Q  166 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaat 263  Q
    |||||||| ||||||||||||||||||||    ||||| ||| ||||||||||  |||||||||| |||| || | ||||||||||||||||||||||||    
T  34388969 aagaacaagacctaatttctacccatttt--gtgtcacccactctcacaatatgaatcctaagag-aaaacacaaaaggaagctttttgatccttccaat 34389065  T
Q  264 aatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
      ||||  |||| |||||| ||||||| | ||||||||||||||||||||| ||||    
T  34389066 ggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccaagagatcctc 34389120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 94 - 317
Target Start/End: Original strand, 21629989 - 21630214
Alignment:
Q  94 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatt 192  Q
    ||||||||| ||  |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| || |||||||||||||||    
T  21629989 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagtttataagcttacacaagaacaagacttaatttctacccatt 21630088  T
Q  193 tttcaagtcactcacactcacaatat---atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtt 287  Q
    ||    ||||| ||||||| |||||    ||||||||||||||  || | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||    
T  21630089 ttgt--gtcacccacactctcaataatgaatcctaagagaaaac-acaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtt 21630185  T
Q  288 tgcaaatgtttcccaacccaagagaacctc 317  Q
    | | ||||||||||||||||||||| ||||    
T  21630186 tac-aatgtttcccaacccaagagatcctc 21630214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 89 - 204
Target Start/End: Original strand, 27139843 - 27139958
Alignment:
Q  89 aggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacc 188  Q
    |||| ||||||||| ||  || |||||||| |||||||||| ||| | |||||| ||||||| ||| ||| ||||||||| ||||| ||||||||||||     
T  27139843 aggagagagcagctctccaattcactatgaaaatagtgatacaaaaatgttacaggaaattaaatttaaagctcacaaagtacaaaccctaatttctaca 27139942  T
Q  189 catttttcaagtcact 204  Q
    ||| ||||||||||||    
T  27139943 catatttcaagtcact 27139958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 77 - 317
Target Start/End: Original strand, 13569357 - 13569598
Alignment:
Q  77 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaa 175  Q
    |||||| || || ||| ||||||||| ||  |||||||||||| | |||| || |||   ||||||||||||||| ||| ||  | ||| |||||||| |    
T  13569357 gacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagtttacacaagaacaaga 13569456  T
Q  176 cctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ct 271  Q
    |||||||||||||| || ||   ||||| ||| ||||||||||  ||||||||||||||  || | ||||||||||||||||||||||||  ||||  ||    
T  13569457 cctaatttctaccctttgttt--gtcacccactctcacaatatgaatcctaagagaaaac-acaaaaggaagctttttgatccttccaatggtgaaatct 13569553  T
Q  272 cattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    || || ||| |||||||   ||||||||||||||||||||| ||||    
T  13569554 cactatccaaggtgttt-ataatgtttcccaacccaagagatcctc 13569598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 317
Target Start/End: Original strand, 31056133 - 31056314
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||| ||||||| ||| || || ||||| |||||| ||||||||||||||||||||    ||||| ||||||| ||||  |||||||||| |||| |    
T  31056133 gttacaataaattagcttataagcttacaaaagaacaagacctaatttctacccatttt--gtgtcacccacactctcaatgaatcctaagag-aaaaca 31056229  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 317  Q
    | | ||||||||||||||||||| ||||  ||||  |||| |||||| ||||||| | ||||||||||||||  ||||||||||||    
T  31056230 caaaaggaagctttttgatcctttcaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 31056314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 107 - 212
Target Start/End: Original strand, 12632605 - 12632709
Alignment:
Q  107 gatccactatgataat-agtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactc 205  Q
    |||||||||||||||  |||| || |||||||||| |||||||||| ||| |  ||||| ||||||||| ||||| ||||| |||||||||||||||| |    
T  12632605 gatccactatgataaagagtggtacaaagaggttaaaagaaattagtttaga--ctcaccaagaacaaaccctaacttctatccatttttcaagtcaccc 12632702  T
Q  206 acactca 212  Q
    |||||||    
T  12632703 acactca 12632709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 317
Target Start/End: Complemental strand, 10707289 - 10707080
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||| | |   ||||| ||    
T  10707289 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagcttacacaagaacaagacctaatttctacccatctgt---gtcaccca 10707193  T
Q  207 cactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccca 302  Q
    | ||||||||||  |||||||||| |||| || | |||||||||||||||||||| |||  ||||  || | |||||| ||||||| | |||||||| ||    
T  10707192 ctctcacaatatgaatcctaagag-aaaacacaaaaggaagctttttgatccttctaatggtgaaatctaactacccaaggtgtttac-aatgtttctca 10707095  T
Q  303 acccaagagaacctc 317  Q
    |||||||||| ||||    
T  10707094 acccaagagatcctc 10707080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 317
Target Start/End: Original strand, 39483020 - 39483202
Alignment:
Q  137 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaata---tatcctaagagaaaa 232  Q
    ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||  | ||||| ||||||| |||||    |||||||||| |||    
T  39483020 gttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccatttt--atgtcacccacactctcaataatgaatcctaagag-aaa 39483116  T
Q  233 atactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | || | |||||| ||||||||| |||||||  ||||  |||| |||||| ||||||| | ||| ||||||||||||||||| ||||    
T  39483117 acacaaaaggaagttttttgatcattccaatggtgaaatctcactacccaaggtgtttac-aatatttcccaacccaagagatcctc 39483202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 317
Target Start/End: Complemental strand, 2838038 - 2837855
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatac 236  Q
    |||||||||||||||   || | ||||||||||||| |||||||||| | ||||||||||| ||||| |||  || ||||  |||||||||| |||| ||    
T  2838038 gttacaagaaattagtacaagagctcacaaagaacacaacctaatttttgcccatttttcatgtcacccaccttctcaatgaatcctaagag-aaaacac 2837940  T
Q  237 tataggaagctttttgatccttccaataatgaa---ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 317  Q
    || |||||  ||||| |||||||||||  ||||   |||| || ||| ||||||| | ||||||||||||||  ||||||||||||    
T  2837939 taaaggaatattttttatccttccaatggtgaaattctcactatccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 2837855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 99 - 212
Target Start/End: Original strand, 5077782 - 5077896
Alignment:
Q  99 agctatctgatccactatgataatagtgatataaagaggttacaagaaattagat-taaaaactcacaaagaacaaaacctaatttctacccatttttca 197  Q
    |||||||  |||||||||||||| ||||||| |||| ||||||||||||||| || | ||| || |||||||||||| |  |||||||||  |||| | |    
T  5077782 agctatccaatccactatgataagagtgatacaaagtggttacaagaaattatatcttaaagcttacaaagaacaaatctgaatttctacttatttatta 5077881  T
Q  198 agtcactcacactca 212  Q
    ||||||||| |||||    
T  5077882 agtcactcagactca 5077896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 8390201 - 8390032
Alignment:
Q  94 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatt 192  Q
    ||||||||| ||  |||||||||||| | |||| || |||   ||||||||||||||| ||| || ||  || |||||||| ||||||||||||||||||    
T  8390201 agagcagctctccaatccactatgatgaaagtgttaaaaaagagttacaagaaattagcttacaagcttgcacaagaacaagacctaatttctacccatt 8390102  T
Q  193 tttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaat 263  Q
    ||    ||||| ||| ||||||||||  |||||||||| |||| || | ||||||||||||||| ||||||||    
T  8390101 tt--gtgtcacccactctcacaatatgaatcctaagag-aaaacacaagaggaagctttttgattcttccaat 8390032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 317
Target Start/End: Original strand, 33118225 - 33118404
Alignment:
Q  137 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||||||||||| ||| || || ||| |||||||| || |||||||||||||||||    ||||| | ||||| ||||  ||| ||||||||||  |    
T  33118225 gttacaagaaattagcttataagcttacacaagaacaagacttaatttctacccattttgt--gtcaccctcactctcaatgaatcttaagagaaaac-a 33118321  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | | ||||||||||||||||||||||||   |||  |||| |||||| ||||||| | |||||| |||||||||||||| ||||    
T  33118322 caaaaggaagctttttgatccttccaatggcgaaatctcactacccaaggtgtttac-aatgttccccaacccaagagatcctc 33118404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 108 - 317
Target Start/End: Complemental strand, 33528658 - 33528452
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 207  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || ||    |||||||| ||||||||||||||||||||    ||||| ||     
T  33528658 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagct----aagaacaagacctaatttctacccattttgt--gtcacccaa 33528565  T
Q  208 actcacaatat---atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccca 302  Q
    |||| |||||    ||||||||||||||  || | ||||||||||||||||||||||||  ||||  |||| ||||||  |||||| | |||||||||||    
T  33528564 actctcaataatgaatcctaagagaaaac-acaaaaggaagctttttgatccttccaatggtgaaatctcactacccaatgtgtttac-aatgtttccca 33528467  T
Q  303 acccaagagaacctc 317  Q
    |||||||||| ||||    
T  33528466 acccaagagatcctc 33528452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 317
Target Start/End: Complemental strand, 10445373 - 10445295
Alignment:
Q  240 aggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||||| ||||||||||    
T  10445373 aggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccgagagaacctc 10445295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 232
Target Start/End: Complemental strand, 41586549 - 41586464
Alignment:
Q  145 aaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa 232  Q
    ||||||| |||||| | |||||||||||||   ||||||||||| |||||||||||||||  |||||| |||  ||||||||||||||    
T  41586549 aaattagtttaaaagcacacaaagaacaaactttaatttctacctatttttcaagtcact--cactcagaatggatcctaagagaaaa 41586464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 20522280 - 20522367
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcac-aaagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||| | |||| || |||  |||||||||||||||||||| || || || ||||||||| || |||||||||||||||||    
T  20522280 atccactatgatgaaagtgttacaaaagggttacaagaaattagattataagcttacaaaagaacaagacttaatttctacccatttt 20522367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 312
Target Start/End: Original strand, 17865263 - 17865469
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| || ||||||||||| |||||  | ||||  ||    
T  17865263 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacataatttctacctatttt--atgtcatcca 17865360  T
Q  207 cactcacaatat---atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccc 301  Q
    ||||| |||||    ||||||||||||||  || | |||||||||||||||||||| | |  ||||  |||| |||||| ||||||| ||| ||||||||    
T  17865361 cactctcaataatgaatcctaagagaaaac-acaaaaggaagctttttgatccttctatttgtgaaatctcactacccaaggtgtttacaa-tgtttccc 17865458  T
Q  302 aacccaagaga 312  Q
    |||||||||||    
T  17865459 aacccaagaga 17865469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 11690574 - 11690515
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||||||| ||||| |  ||||||||||||||| |||||||||||||||||||    
T  11690574 ggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccatttt 11690515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 42362425 - 42362366
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||||||| ||||| |  ||||||||||||||| |||||||||||||||||||    
T  42362425 ggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccatttt 42362366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 317
Target Start/End: Original strand, 40739033 - 40739103
Alignment:
Q  248 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||||||||||||||  ||||  ||||||||||| ||||||| ||| ||||||||||||||||||| ||||    
T  40739033 ttttgatccttccaatggtgaaatctcattacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 40739103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 723839 - 723900
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttttc 196  Q
    |||||||||||||||| ||||| |  ||||||||||||||| ||||||||||||||| |||||    
T  723839 ggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccagttttc 723900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 23078369 - 23078304
Alignment:
Q  248 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagaga 312  Q
    |||||||||||||||| |||||  |||| |||||| ||||||| ||| |||||||||||||||||||    
T  23078369 ttttgatccttccaatgatgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagaga 23078304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 10445452 - 10445394
Alignment:
Q  137 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttt 194  Q
    ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||    
T  10445452 gttacaagaaattagcttacaatcttacacaagaacaagacctaatttctacccatttt 10445394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 194
Target Start/End: Original strand, 11151673 - 11151745
Alignment:
Q  123 agtgatataaagaggttacaagaaattagattaa--aaactcacaaagaacaaaacctaatttctacccatttt 194  Q
    ||||||| |||  |||||||||||||||| ||||  || |||||||||||| ||| ||||||||||||||||||    
T  11151673 agtgatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaatctaatttctacccatttt 11151745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 14633921 - 14633980
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||||||| ||||| |  ||||||||||||||  |||||||||||||||||||    
T  14633921 ggttacaagaaattagcttaaacaagctcacaaagaacaat-cctaatttctacccatttt 14633980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 24885734 - 24885675
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||||||| ||||| |  ||||||||||||||| |||||||||||| ||||||    
T  24885734 ggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctactcatttt 24885675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 34139866 - 34139925
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||||||| ||||| |  ||||||||||||||  |||||||||||||||||||    
T  34139866 ggttacaagaaattagcttaaacaagctcacaaagaacaac-cctaatttctacccatttt 34139925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 1345525 - 1345470
Alignment:
Q  160 ctcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaat 216  Q
    |||||||| |||| |||||||||||||||||||||||| ||||| | ||||| ||||    
T  1345525 ctcacaaa-aacacaacctaatttctacccatttttcatgtcacccccactctcaat 1345470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 14202501 - 14202559
Alignment:
Q  137 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    ||||||||||||||| ||||| |  ||||||||||||||| | |||||||||||||||||    
T  14202501 gttacaagaaattagcttaaacaagctcacaaagaacaaa-cataatttctacccatttt 14202559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 26353256 - 26353193
Alignment:
Q  137 gttacaagaaattagattaaa--aactcacaaagaacaaaacctaatttctacccatttttcaa 198  Q
    ||||||||||||||| || ||  ||||||||||||||||| | |||||||||| | ||||||||    
T  26353256 gttacaagaaattagcttcaacaaactcacaaagaacaaaccttaatttctacacttttttcaa 26353193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 317
Target Start/End: Complemental strand, 36757660 - 36757590
Alignment:
Q  248 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  36757660 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 36757590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 108 - 317
Target Start/End: Original strand, 37781922 - 37782133
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 207  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||  ||    
T  37781922 atccactataataaaagtgatacaaagaggttacaagaaattagcttaaaaactcacaaagaacaaatcttaatttctacccatttttcaagtcacctac 37782021  T
Q  208 actc-acaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaac 304  Q
    ||||   |||  ||| |||||| |||| |||| | ||  ||||||||| ||||||||||||||  |||| |||||| ||||||| ||||||||| |||||    
T  37782022 actcgtaaatgaatcttaagag-aaaacactaaaagagactttttgattcttccaataatgaaatctcactacccaaggtgtttacaaatgttttccaac 37782120  T
Q  305 ccaagagaacctc 317  Q
    |||||||| ||||    
T  37782121 ccaagagagcctc 37782133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 77 - 317
Target Start/End: Complemental strand, 39774373 - 39774133
Alignment:
Q  77 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaag-aacaaaa 175  Q
    ||||||||| || ||||||||||||| ||  ||||||||  || | ||||||| ||| ||||||||||||||||| |||||| ||||||||| ||||| |    
T  39774373 gacctactctgggggatagagcagctctccaatccactaaaatgaaagtgatacaaataggttacaagaaattagcttaaaagctcacaaagaaacaaga 39774274  T
Q  176 cctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatg--aactca 273  Q
    ||||||||||| ||| |||||| ||||||||||||| ||||  |||| ||||| ||||||| | |||||||||||||||| |||||||  ||  ||||||    
T  39774273 cctaatttcta-ccaattttcatgtcactcacactctcaatgaatcccaagag-aaaatacaaaaggaagctttttgatcattccaatggtgaaaactca 39774176  T
Q  274 ttacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
     |||||| ||||||| | ||||||||||||| ||||||||||||    
T  39774175 ctacccaaggtgtttac-aatgtttcccaactcaagagaacctc 39774133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 136 - 317
Target Start/End: Original strand, 5112325 - 5112506
Alignment:
Q  136 ggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa-at 234  Q
    |||||||||||||||| ||||||||||| ||| ||| | ||||||||| |||| |||||| ||||||||||||||||||||  |||||||||||||| ||    
T  5112325 ggttacaagaaattagcttaaaaactcataaaaaacgagacctaatttgtacctattttttaagtcactcacactcacaatgaatcctaagagaaaacat 5112424  T
Q  235 actataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    |  | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||||||||||||||||    
T  5112425 a--aaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccaagagaacctc 5112506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 96 - 310
Target Start/End: Complemental strand, 34670711 - 34670499
Alignment:
Q  96 agcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccattttt 195  Q
    ||||||| ||||||||||||||||||  ||   | ||||||||||||||||||||| |||| | ||||||||||||||| | ||||||||| ||||||||    
T  34670711 agcagctctctgatccactatgataagggt---acaaagaggttacaagaaattagcttaatagctcacaaagaacaaatcataatttctatccattttt 34670615  T
Q  196 caagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataat--gaactcattacccatggtgtttgcaaa 293  Q
    |||||||||||||||||||||  |||||||||| |||| |||| || || ||||| |||||||||  ||||  || |||| |||||| | || || ||||    
T  34670614 caagtcactcacactcacaatgaatcctaagag-aaaacactaaagaaaacttttagatccttcctctaatgagatctcactacccaagatgcttacaaa 34670516  T
Q  294 tgtttcccaacccaaga 310  Q
    |||||| |||| |||||    
T  34670515 tgtttctcaactcaaga 34670499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 108 - 232
Target Start/End: Complemental strand, 18912400 - 18912276
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 207  Q
    |||||||||||||| ||||||| ||| ||| ||||||||||||| ||| |||||||||||||||||| ||||| || || |||||||||||||||||||     
T  18912400 atccactatgataagagtgatacaaaaaggatacaagaaattagtttacaaactcacaaagaacaaaccctaaattatatccatttttcaagtcactcaa 18912301  T
Q  208 actcacaatatatcctaagagaaaa 232  Q
    || ||||||  ||||||||||||||    
T  18912300 acccacaatgaatcctaagagaaaa 18912276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 77 - 317
Target Start/End: Original strand, 18377388 - 18377628
Alignment:
Q  77 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaag-aacaaaa 175  Q
    ||||||||| |||||| ||||||||  ||   ||||||| ||| | ||||||| |||  ||||| ||||||| || |||||| ||||||||| |||||      
T  18377388 gacctactctggaggagagagcagccctccattccactaagatgaaagtgatacaaatgggttataagaaatcagcttaaaagctcacaaagaaacaagc 18377487  T
Q  176 cctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctca 273  Q
    ||||||||||||||| |||||| ||||| |||||| |||||  ||||||||| ||||| || | | ||||||||||||||||||||||  | ||  ||||    
T  18377488 cctaatttctaccca-ttttcatgtcacccacacttacaatgaatcctaaga-aaaaacacaaaatgaagctttttgatccttccaatggtaaaatctca 18377585  T
Q  274 ttacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||||| || |||| | ||||||| ||| ||||||||||||||    
T  18377586 ttacccaaggggtttac-aatgttttccatcccaagagaacctc 18377628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 39593791 - 39593910
Alignment:
Q  111 cactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacact 210  Q
    ||||||||||| ||||||| ||| | ||||||||||||||| ||| ||||||||||||||   |||||||||||||||| ||| |||||||||||| ||     
T  39593791 cactatgataagagtgatacaaataagttacaagaaattagtttacaaactcacaaagaa-tcaacctaatttctacccctttgtcaagtcactcaaacc 39593889  T
Q  211 cacaatatatcctaagagaaa 231  Q
    ||||||  |||||||||||||    
T  39593890 cacaatgaatcctaagagaaa 39593910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 108 - 263
Target Start/End: Complemental strand, 1983337 - 1983184
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 207  Q
    |||||||| ||| | ||||||| |||| |||||||||||||||| ||  || ||||||||||||||||| ||||||||| || |||||||||||||  ||    
T  1983337 atccactaggatcaaagtgatacaaaggggttacaagaaattagcttgcaagctcacaaagaacaaaacataatttctatcc-tttttcaagtcacctac 1983239  T
Q  208 actcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaat 263  Q
    |||| ||||  ||||||||||||||   | | |||||||||||| |||||||||||    
T  1983238 actctcaatgaatcctaagagaaaacc-caaaaggaagcttttttatccttccaat 1983184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 108 - 317
Target Start/End: Original strand, 3777609 - 3777818
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||||||| | |||| || |||||| |||||||||| ||| ||  ||||| ||| |||||||| | ||||||||||||||||||    ||||| ||    
T  3777609 atccactatgatgaaagtgttacaaagag-ttacaagaaaatagcttgcaaacttacacaagaacaagatctaatttctacccattttgt--gtcaccca 3777705  T
Q  207 cactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccca 302  Q
    | ||||||||||  |||||||||||||| ||| | |||||||||||||||| |||||||  ||||  |||| |||||| ||||||| | |||||||||||    
T  3777706 ctctcacaatatgaatcctaagagaaaa-tacaaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttac-aatgtttccca 3777803  T
Q  303 acccaagagaacctc 317  Q
    |||||||||| ||||    
T  3777804 acccaagagatcctc 3777818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 137 - 317
Target Start/End: Complemental strand, 25862041 - 25861861
Alignment:
Q  137 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||||||||||| ||| || || ||| |||||||| |||||||| |||||||||||    ||||| ||||||| ||||  ||||||||||||||| |    
T  25862041 gttacaagaaattagcttataagcttacacaagaacaagacctaattcctacccattttgt--gtcacccacactctcaatgaatcctaagagaaaaaca 25861944  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | | |||||| |||||||||||||||||  ||||  |||| ||| || ||||||| | ||||||||||||||||||||| ||||    
T  25861943 caaaaggaagttttttgatccttccaatggtgaaatctcactactcaaggtgtttac-aatgtttcccaacccaagagatcctc 25861861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 94 - 310
Target Start/End: Complemental strand, 873569 - 873352
Alignment:
Q  94 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccattt 193  Q
    |||||| || || ||||||||||||| | | |||||  || ||||||||||||||||  |||||| ||| |||| |||||| |||||||||||| ||| |    
T  873569 agagcaactctccgatccactatgattagaatgataccaataggttacaagaaattaacttaaaagctcgcaaataacaaatcctaatttctactcatat 873470  T
Q  194 ttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataat--gaactcattacccatggtgtttgca 291  Q
    ||| |||||| |||| ||||| ||  || |||||| |||| || | | |||||||||||||||| ||  ||||  || |||| ||| || ||||||| ||    
T  873469 ttcgagtcacccacagtcacattaagtcttaagag-aaaacacaaaatgaagctttttgatcctccctctaatgagatctcactactcaaggtgtttaca 873371  T
Q  292 aatgtttcccaacccaaga 310  Q
    |||||| ||||||||||||    
T  873370 aatgttccccaacccaaga 873352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 77 - 317
Target Start/End: Complemental strand, 16623361 - 16623121
Alignment:
Q  77 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaa 175  Q
    |||||| || |||||| ||||||||| ||  |||||||||||| | |||| || |||   ||||||||||||||| | | || || ||| |||||||| |    
T  16623361 gacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagctaataagcttacagaagaacaaga 16623262  T
Q  176 cctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ct 271  Q
    |||||||||||||||||||    ||||| ||| ||||||||||  ||||||| || |||| || | ||||||| ||||||||||||||||  ||||  ||    
T  16623261 cctaatttctacccatttt--gtgtcacccactctcacaatatgaatcctaaaag-aaaacacaaaaggaagc-ttttgatccttccaatggtgaaatct 16623166  T
Q  272 cattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    || |||||| ||||||| | ||||||||||||||||||||| ||||    
T  16623165 cactacccaaggtgtttac-aatgtttcccaacccaagagatcctc 16623121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 108 - 216
Target Start/End: Original strand, 4956239 - 4956352
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacc------taatttctacccatttttcaagtc 201  Q
    |||||||||||||| | ||||| ||||||||||||||||||||| | ||||||||| |||||||||| ||      |||||||||||||  |||||||||    
T  4956239 atccactatgataagaatgataaaaagaggttacaagaaattagctaaaaaactcataaagaacaaaccctaattataatttctaccca-atttcaagtc 4956337  T
Q  202 actcacactcacaat 216  Q
    || ||||||||||||    
T  4956338 acccacactcacaat 4956352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 8114774 - 8114680
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 203  Q
    |||||||||||||| | ||||||||| |||||||||||||| |  ||| || ||||||||||||||| |||||||| || ||||||||||||||||    
T  8114774 atccactatgataagaatgatataaataggttacaagaaatcac-ttataatctcacaaagaacaaaccctaatttgtatccatttttcaagtcac 8114680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 108 - 317
Target Start/End: Original strand, 10047439 - 10047650
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||    ||||| ||    
T  10047439 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccattttgt--gtcaccca 10047536  T
Q  207 cactcacaatat---atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccc 301  Q
    ||||| |||||    ||||||||| ||||  || | |||||| |||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||    
T  10047537 cactctcaataatgaatcctaagacaaaac-acaaaaggaagttttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttccc 10047634  T
Q  302 aacccaagagaacctc 317  Q
    ||||||||||| ||||    
T  10047635 aacccaagagatcctc 10047650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 317
Target Start/End: Complemental strand, 5269210 - 5269028
Alignment:
Q  137 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat---atcctaagagaaaa 232  Q
    ||||||||||||||| ||| || || ||| |||||||| |||||||||||||||||| |    ||||| ||||||| |||||    ||||||||||||||    
T  5269210 gttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccattgtgt--gtcacccacactctcaataatgaatcctaagagaaaa 5269113  T
Q  233 atactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
      || | ||||||||||||||||||||||||  ||||  |||| || ||| ||||||| | ||||||||||||||||||||| ||||    
T  5269112 c-acaaaaggaagctttttgatccttccaatggtgaaatctcactatccaaggtgtttac-aatgtttcccaacccaagagatcctc 5269028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 317
Target Start/End: Complemental strand, 6743395 - 6743243
Alignment:
Q  165 aaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat---atcctaagagaaaaatactataggaagctttttgatccttcca 261  Q
    ||||||||| ||||||||||||||||||||    ||||| ||||||| |||||    ||||||||||||||  || | |||||| |||||||||||||||    
T  6743395 aaagaacaagacctaatttctacccattttgt--gtcacccacactctcaataatgaatcctaagagaaaac-acaaaaggaag-tttttgatccttcca 6743300  T
Q  262 ataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||  ||||  ||||||||||| ||||||| ||| ||||||||||||||||||| ||||    
T  6743299 atggtgaaatctcattacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 6743243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 317
Target Start/End: Complemental strand, 42599581 - 42599402
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||||||||||| ||| || || ||||| |||||| ||||||||||||||||||||    ||||| | ||||| ||||  |||||||||| |||| |    
T  42599581 gttacaagaaattagcttataagcttacaaaagaacaagacctaatttctacccatttt--gtgtcacccgcactctcaatgaatcctaagag-aaaaca 42599485  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | | |||||| ||||| |||||||||||  ||||  |||| |||||| |||||||   |||||||||||||| |||||||||||    
T  42599484 caaaaggaagtttttttatccttccaatggtgaaatctcactacccaaggtgttt-agaatgtttcccaaccgaagagaacctc 42599402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 317
Target Start/End: Original strand, 24333935 - 24334082
Alignment:
Q  172 aaaacctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa 269  Q
    |||||||||||||||||||||||    ||||  ||| ||||||||||  ||||||||||||||  || | ||||||||||||||||||||||||  ||||    
T  24333935 aaaacctaatttctacccattttgt--gtcagccactctcacaatatgaatcctaagagaaaac-acaaaaggaagctttttgatccttccaatggtgaa 24334031  T
Q  270 --ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 317  Q
      |||| |||||| ||||||| | ||||||||||||||  ||||||||||||    
T  24334032 atctcactacccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 24334082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 230
Target Start/End: Complemental strand, 42234390 - 42234286
Alignment:
Q  123 agtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcc 222  Q
    |||||||||||||||||||||||||||||||   ||  ||||||||||| ||  ||||||||||| ||||||| |||| |||||  | ||||  ||||||    
T  42234390 agtgatataaagaggttacaagaaattagatctcaagttcacaaagaac-aactctaatttctactcattttttaagttactcaatcccaca--atatcc 42234294  T
Q  223 taagagaa 230  Q
    ||||||||    
T  42234293 taagagaa 42234286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 36175180 - 36175290
Alignment:
Q  120 aatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatata 219  Q
    |||| ||||| ||||||||| ||||||||||| |||||| |||| | |  || ||  ||||||||||||||||||  ||||||  ||||||||||||  |    
T  36175180 aataatgatacaaagaggtttcaagaaattagcttaaaagctcatacatgacgaactctaatttctacccattttctaagtca--cacactcacaatgaa 36175277  T
Q  220 tcctaagagaaaa 232  Q
    ||||| |||||||    
T  36175278 tcctatgagaaaa 36175290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 193
Target Start/End: Complemental strand, 36315297 - 36315181
Alignment:
Q  77 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaa 175  Q
    |||||| || || ||| ||||||||| ||  |||||||||||| | |||| || |||||| |||||||||||||| ||| || || ||| |||| ||| |    
T  36315297 gacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagag-ttacaagaaattagcttagaagcttacacaagagcaaga 36315199  T
Q  176 cctaatttctacccattt 193  Q
    ||||||||||||||||||    
T  36315198 cctaatttctacccattt 36315181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 193
Target Start/End: Complemental strand, 36329506 - 36329390
Alignment:
Q  77 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaa 175  Q
    |||||| || || ||| ||||||||| ||  |||||||||||| | |||| || |||||| |||||||||||||| ||| || || ||| |||| ||| |    
T  36329506 gacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagag-ttacaagaaattagcttagaagcttacacaagagcaaga 36329408  T
Q  176 cctaatttctacccattt 193  Q
    ||||||||||||||||||    
T  36329407 cctaatttctacccattt 36329390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 5871906 - 5871832
Alignment:
Q  123 agtgatataaagaggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttttc 196  Q
    ||||||| |||  |||||||||||||| | ||||| |  ||||||||||||||| |||||||||||||||||||||    
T  5871906 agtgataaaaatgggttacaagaaatttgcttaaacaagctcacaaagaacaaa-cctaatttctacccatttttc 5871832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 31474223 - 31474164
Alignment:
Q  137 gttacaagaaattagattaaa--aactcacaaagaacaaaacctaatttctacccatttt 194  Q
    ||||||||||||||| || ||  |||||| ||||||||| ||||||||||||||||||||    
T  31474223 gttacaagaaattagcttcaacaaactcaaaaagaacaagacctaatttctacccatttt 31474164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 317
Target Start/End: Complemental strand, 16628839 - 16628700
Alignment:
Q  177 ctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctc 272  Q
    ||||||||||||||||||    ||||| ||| ||||||||||  ||||||| ||||||  || | ||||||||||| ||||||||||||  ||||  |||    
T  16628839 ctaatttctacccattttgt--gtcacccactctcacaatatgaatcctaaaagaaaac-acaaaaggaagctttt-gatccttccaatggtgaaatctc 16628744  T
Q  273 attacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  16628743 actacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 16628700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 52467551 - 52467590
Alignment:
Q  276 acccatggtgtttgcaaatgtttcccaacccaagagaacc 315  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  52467551 acccaaggtgtttacaaatgtttcccaacccaagagaacc 52467590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 415
Target Start/End: Complemental strand, 5349742 - 5349708
Alignment:
Q  381 atagtgcccaaaacctgtcaaaatcgtgtcacgat 415  Q
    |||||| ||||||||||||||||||||||||||||    
T  5349742 atagtgtccaaaacctgtcaaaatcgtgtcacgat 5349708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 314
Target Start/End: Complemental strand, 24969083 - 24969045
Alignment:
Q  276 acccatggtgtttgcaaatgtttcccaacccaagagaac 314  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  24969083 acccaaggtgtttacaaatgtttcccaacccaagagaac 24969045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 194
Target Start/End: Original strand, 45687303 - 45687337
Alignment:
Q  160 ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||||||||||||||||| ||||||||    
T  45687303 ctcacaaagaacaaaacctaatttcttcccatttt 45687337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 379453 - 379394
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||||||| || || |  ||||||||||||||| |||||||||||||||||||    
T  379453 ggttacaagaaattagcttcaacaagctcacaaagaacaaa-cctaatttctacccatttt 379394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 194
Target Start/End: Complemental strand, 3796570 - 3796469
Alignment:
Q  94 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatt 192  Q
    |||||| || ||| |||||||||||| | |||| || |||   ||||||||||||||| ||| || ||  || |||||||| ||||||||||||||||||    
T  3796570 agagcaactctctaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagcttgcacaagaacaagacctaatttctacccatt 3796471  T
Q  193 tt 194  Q
    ||    
T  3796470 tt 3796469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 193
Target Start/End: Complemental strand, 5396739 - 5396623
Alignment:
Q  77 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaa 175  Q
    |||||| || |||||| ||||||||| ||  |||||||||||| | |||| |  |||||| |||||||||| ||| ||  || || ||| |||||||| |    
T  5396739 gacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttgcaaagag-ttacaagaaaatagcttgcaagcttacacaagaacaaga 5396641  T
Q  176 cctaatttctacccattt 193  Q
    ||||||||||||||||||    
T  5396640 cctaatttctacccattt 5396623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 37229919 - 37229960
Alignment:
Q  276 acccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||    
T  37229919 acccaaggtgtttacaaatgttttccaacccaagagaacctc 37229960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 6677433 - 6677401
Alignment:
Q  283 gtgtttgcaaatgtttcccaacccaagagaacc 315  Q
    |||||| ||||||||||||||||||||||||||    
T  6677433 gtgtttacaaatgtttcccaacccaagagaacc 6677401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 260
Target Start/End: Complemental strand, 102535 - 102380
Alignment:
Q  104 tctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 203  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||||||  |||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  102535 tctgatccacaatgataagagtgatacaaagaggttacaagaaattatcttaaaagctcacaaaaaacaaaccctaatttctacccatttttcaagtcac 102436  T
Q  204 tcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttcc 260  Q
     |||||||| |||| || | ||||| |||| |||| |||| ||||||||||||||||    
T  102435 acacactcataataaattcgaagag-aaaacactaaaggatgctttttgatccttcc 102380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 351
Target Start/End: Complemental strand, 114494 - 114456
Alignment:
Q  313 acctcctttgatttcttaagtttctctctcttaaagctc 351  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  114494 acctcctttgatttctcaagtttctctctcttcaagctc 114456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 77 - 317
Target Start/End: Complemental strand, 5817337 - 5817098
Alignment:
Q  77 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaac 176  Q
    ||||||||| || ||| ||||||||| ||  ||||||||  || | ||||||| |||| |||||||||||||| |  ||| | |||||||||||||||||    
T  5817337 gacctactctgg-ggagagagcagctctccaatccactaatatgaaagtgatacaaaggggttacaagaaatttgcataagagctcacaaagaacaaaac 5817239  T
Q  177 ctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcat 274  Q
    |||||||||| |||||||||||||||||||||||| ||||  ||||||||| ||||| || | ||||||||||||||||||||||||  ||||  ||||     
T  5817238 ctaatttctatccatttttcaagtcactcacactctcaatgaatcctaaga-aaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcac 5817140  T
Q  275 tacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | |||| ||| ||| | |||||||||||||| || ||||||||    
T  5817139 tccccaaggtatttac-aatgtttcccaaccaaatagaacctc 5817098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 28617344 - 28617172
Alignment:
Q  26 aaaggaagaaaacaag-acaccaatattgtttgcgtagtttggtccaaaagggacctactccggaggatagagcagctatctgatccactatgataatag 124  Q
    |||||||||||||||  ||||||||||||||| |  |||| ||||||| | | |||||||| || ||| ||||||||| ||  |||||||| ||| | ||    
T  28617344 aaaggaagaaaacaaacacaccaatattgtttacccagttcggtccaatatg-acctactctgggggagagagcagctctccaatccactaagatgaaag 28617246  T
Q  125 tgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaa 198  Q
    ||||| || | |||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||    
T  28617245 tgatacaatggggttacaagaaattagcttaaaagctcacaaagaacaaaacctaatttctacctatttttcaa 28617172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 137 - 317
Target Start/End: Complemental strand, 23403022 - 23402841
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||||||||||| ||| || || ||||| ||||||  ||||||||||||||||||||||  |||||||||||| ||||  |||||||||| |||| |    
T  23403022 gttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccatttttcacatcactcacactctcaatgaatcctaagag-aaaaca 23402924  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | | |||||||||||||||| |||||||  ||||  |||| |||||| ||||||| | ||||||||||||||||||||||||||    
T  23402923 caaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccaagagaacctc 23402841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 317
Target Start/End: Original strand, 20284177 - 20284358
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||||||||||| ||| || || ||||| ||||||  |||||||||||||| |||||||  |||| ||||||| ||||  |||||||||| |||| |    
T  20284177 gttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccttttttcatatcacccacactctcaatgaatcctaagag-aaaaca 20284275  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||||||||||||||||    
T  20284276 caaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccaagagaacctc 20284358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 137 - 317
Target Start/End: Original strand, 3047344 - 3047523
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatac 236  Q
    |||||||||||| |  |||||| |||||||||||||| ||||||||||||||||||||| ||||||| ||||||| ||||  ||| |||||  |||| ||    
T  3047344 gttacaagaaatcaacttaaaagctcacaaagaacaagacctaatttctacccattttt-aagtcacccacactctcaatgaatcttaaga-taaaacac 3047441  T
Q  237 tataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
     | |||||||||||||||||||||||| |||||  |||| |||||| | || ||   | ||||||||||||||||||||||||    
T  3047442 aaaaggaagctttttgatccttccaatgatgaaatctcactacccaagatgatt-atagtgtttcccaacccaagagaacctc 3047523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 94 - 317
Target Start/End: Original strand, 29159849 - 29160076
Alignment:
Q  94 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatt 192  Q
    ||||||||| ||  |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||    
T  29159849 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagcttacacaagaacaagacctaatttctacccatt 29159948  T
Q  193 tttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgttt 288  Q
    |||   ||||| ||| ||||||||||  |||||||||| |||| || | ||||||||||||||||||||||||  ||||  |||| |||||| |||||||    
T  29159949 ttt-gtgtcacccactctcacaatatgaatcctaagag-aaaacacaaaaggaagctttttgatccttccaatgttgaaatctcactacccaaggtgttt 29160046  T
Q  289 gcaaatgtttcccaacc--caagagaacctc 317  Q
     | ||||||||||||||  ||||||||||||    
T  29160047 ac-aatgtttcccaaccctcaagagaacctc 29160076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 166 - 316
Target Start/End: Complemental strand, 9185153 - 9185003
Alignment:
Q  166 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataa 265  Q
    ||||||||  ||||||||||||||||||||||  |||| |||||||  |||  ||||||||||||||  ||   ||||||||||||||||||||||||      
T  9185153 aagaacaagtcctaatttctacccatttttcatatcacccacactcttaatgaatcctaagagaaaac-acacaaggaagctttttgatccttccaatgg 9185055  T
Q  266 tgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacct 316  Q
    ||||  |||| |||||| ||||||| ||| |||||||||||||||||||||||    
T  9185054 tgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagaacct 9185003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 166 - 316
Target Start/End: Complemental strand, 9189986 - 9189836
Alignment:
Q  166 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataa 265  Q
    ||||||||  ||||||||||||||||||||||  |||| |||||||  |||  ||||||||||||||  ||   ||||||||||||||||||||||||      
T  9189986 aagaacaagtcctaatttctacccatttttcatatcacccacactcttaatgaatcctaagagaaaac-acacaaggaagctttttgatccttccaatgg 9189888  T
Q  266 tgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacct 316  Q
    ||||  |||| |||||| ||||||| ||| |||||||||||||||||||||||    
T  9189887 tgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagaacct 9189836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 166 - 317
Target Start/End: Original strand, 2580508 - 2580659
Alignment:
Q  166 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataa 265  Q
    ||||||||  |||| |||||||||||||||||  |||| ||||||| ||||  |||||||||| |||| || | ||||||||||||||||||| ||||      
T  2580508 aagaacaagtcctagtttctacccatttttcatatcacccacactctcaatgaatcctaagag-aaaacacaaaaggaagctttttgatcctttcaatgg 2580606  T
Q  266 tgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||  |||| |||||| ||||||| | ||||||| ||||||||||||||||||    
T  2580607 tgaaatctcactacccaaggtgtttac-aatgttttccaacccaagagaacctc 2580659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 313
Target Start/End: Complemental strand, 9235591 - 9235414
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||||||||||| ||| || || ||||| ||||||  ||||||||||||||||||||||  |||| | ||||| |||   |||||||||| |||| |    
T  9235591 gttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccatttttcatatcacccgcactctcaacgaatcctaagag-aaaaca 9235493  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaa 313  Q
    | | ||||||||||||||||||| ||||  ||||   ||| || ||| ||||||| | ||||||||||||||||||||||    
T  9235492 caaaaggaagctttttgatccttgcaatggtgaaatatcactatccaaggtgtttac-aatgtttcccaacccaagagaa 9235414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 137 - 316
Target Start/End: Complemental strand, 33332458 - 33332279
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||||||||||| ||| || || ||||| |||||| ||||||||||||| |||||||  | |||| ||||||| ||||   |||||||||||||  |    
T  33332458 gttacaagaaattagcttataagcttacaaaagaacaagacctaatttctactcatttttgta-tcacgcacactctcaatgattcctaagagaaaac-a 33332361  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacct 316  Q
    | |  |||||||||||||||||||||||  ||||  |||| |||||| | ||||| | |||||||| ||||||||||||||||    
T  33332360 caaagggaagctttttgatccttccaatggtgaaatctcactacccaagatgtttac-aatgtttctcaacccaagagaacct 33332279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 317
Target Start/End: Complemental strand, 2647733 - 2647525
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||    ||||| ||    
T  2647733 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccatttt--gtgtcaccca 2647636  T
Q  207 cactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaac 304  Q
    ||||| ||||  |||||||||| |||| || | | |||| |||||||||||||||||  ||||  |||| |||||| |||| || |  ||||||||||||    
T  2647635 cactctcaatgaatcctaagag-aaaacacaaaatgaagttttttgatccttccaatggtgaaatctcactacccaaggtgcttac-catgtttcccaac 2647538  T
Q  305 ccaagagaacctc 317  Q
    |||||||| ||||    
T  2647537 ccaagagatcctc 2647525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 413
Target Start/End: Original strand, 36574780 - 36574879
Alignment:
Q  313 acctcctttgatttcttaagtttctctctctt-aaagctcgctcaaaagattgaacatagaatgcttacatagtgcccaaaacctgtcaaaatcgtgtca 411  Q
    |||||||||||||||| || |||||||||||| ||| ||| || |||| || |||||  ||||||||| |||||||||||||||| ||||||| ||||||    
T  36574780 acctcctttgatttctcaattttctctctcttgaaatctc-cttaaaaaat-gaacaatgaatgcttatatagtgcccaaaacctatcaaaattgtgtca 36574877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 24525992 - 24526051
Alignment:
Q  137 gttacaagaaattagatt--aaaaactcacaaagaacaaaacctaatttctacccatttt 194  Q
    ||||||||||||||| ||  | || |||||||||||||||||||||||||||||||||||    
T  24525992 gttacaagaaattagctttgacaagctcacaaagaacaaaacctaatttctacccatttt 24526051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 761261 - 761328
Alignment:
Q  135 aggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtca 202  Q
    ||||||||| |||| || | |||| ||||||||||| |||  ||||||||||||||||||||||||||    
T  761261 aggttacaataaatgagctcaaaagctcacaaagaaaaaacactaatttctacccatttttcaagtca 761328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 258
Target Start/End: Complemental strand, 4162805 - 4162655
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 207  Q
    |||||||||||||  | | ||| |||| |||||||||||| ||||||  || ||||||||||||||| | ||||||||||  ||||||||||||| |||     
T  4162805 atccactatgatatgactaatacaaagtggttacaagaaagtagattccaa-ctcacaaagaacaaatcataatttctacttatttttcaagtcattcaa 4162707  T
Q  208 actcacaatatatcctaagagaaaa-atactataggaagctttttgatcctt 258  Q
    || || |||  ||| ||| |||||| ||| || || ||||||||| ||||||    
T  4162706 acccataatgaatcataacagaaaacatattaaagaaagctttttcatcctt 4162655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 309
Target Start/End: Original strand, 49091721 - 49091924
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||||||| | |||| || |||   ||||||||||||||  ||| || || ||| |||||||| |||||||||||||||||| |    ||||| ||    
T  49091721 atccactatgatgaaagtgttacaaaagagttacaagaaattaccttataagcttacacaagaacaagacctaatttctacccattctgt--gtcaccca 49091818  T
Q  207 cactcacaatat---atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccc 301  Q
    ||||| | |||    ||||||||||||||  || | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||    
T  49091819 cactctccataatgaatcctaagagaaaac-acaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgttttc-aatgtttccc 49091916  T
Q  302 aacccaag 309  Q
    ||||||||    
T  49091917 aacccaag 49091924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 263
Target Start/End: Original strand, 56007 - 56163
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||    ||||| ||    
T  56007 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccatttt--gtgtcaccca 56104  T
Q  207 cactcacaata---tatcctaagagaaaaatactataggaagctttttgatccttccaat 263  Q
    ||||| |||||    |||||||||| |||| || | | ||||||||||||||||||||||    
T  56105 cactctcaataatgaatcctaagag-aaaacacaaaaagaagctttttgatccttccaat 56163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 317
Target Start/End: Complemental strand, 4796675 - 4796496
Alignment:
Q  137 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||||||||||| ||| || || ||| |||||||| |||| |||| ||||||||||    |||||  ||| || ||||  ||||||||||||||  |    
T  4796675 gttacaagaaattagcttataagcttacacaagaacaagacctcatttatacccattttgt--gtcacctacattctcaatgaatcctaagagaaaac-a 4796579  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | | | ||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||| ||||||||||||| ||||    
T  4796578 caaaaagaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgttttccaacccaagagatcctc 4796496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 309
Target Start/End: Original strand, 35960905 - 35961078
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcaca-atatatcctaagagaaaaat 234  Q
    |||| |||||||||| ||| || || ||||| |||||| |||||||||||||||||||| ||  |||| |||||||| | ||  ||| ||||||||||      
T  35960905 gttagaagaaattagcttataagcttacaaaagaacaatacctaatttctacccatttt-catatcacccacactcaaagatgaatcttaagagaaaacg 35961003  T
Q  235 actataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaag 309  Q
     | | ||||||||||||||||||||||||  ||||  |||| |||| | ||||||| | ||||||||||||||||||    
T  35961004 -caaaaggaagctttttgatccttccaatggtgaaatctcactacctaaggtgtttac-aatgtttcccaacccaag 35961078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 36146605 - 36146646
Alignment:
Q  276 acccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||| ||||||| ||||||||||||||||||||||||||||    
T  36146605 acccaaggtgtttacaaatgtttcccaacccaagagaacctc 36146646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 45685727 - 45685658
Alignment:
Q  163 acaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa 232  Q
    |||||||||||| | ||||||||| |||||||| |||||||||| | || ||||  ||||||||||||||    
T  45685727 acaaagaacaaaccttaatttctatccattttttaagtcactcaaagtcgcaatgaatcctaagagaaaa 45685658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 46516347 - 46516260
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||| | |||| || |||   ||||||||||||||| |||||| || ||| |||||||| || |||||||||||||||||    
T  46516347 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttaaaagcttacacaagaacaagacataatttctacccatttt 46516260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 317
Target Start/End: Complemental strand, 46516209 - 46516133
Alignment:
Q  242 gaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||| ||||||| ||||    
T  46516209 gaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaactcaagagatcctc 46516133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 8359412 - 8359471
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||||||| ||||| |  ||||||||||| ||| |||||||||||||||||||    
T  8359412 ggttacaagaaattagtttaaacaagctcacaaagaa-aaaccctaatttctacccatttt 8359471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 23565157 - 23565217
Alignment:
Q  137 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccattttt 195  Q
    ||||||||||||||| || || |  |||||||||||||| |||||||||||||| ||||||    
T  23565157 gttacaagaaattagtttcaacaagctcacaaagaacaagacctaatttctacctattttt 23565217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 342
Target Start/End: Original strand, 30843510 - 30843539
Alignment:
Q  313 acctcctttgatttcttaagtttctctctc 342  Q
    ||||||||||||||||||||||||||||||    
T  30843510 acctcctttgatttcttaagtttctctctc 30843539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 36574601 - 36574665
Alignment:
Q  126 gatataaagaggttacaagaaattagattaaa--aactcacaaagaacaaaacctaatttctacc 188  Q
    ||||||||  |||||||||||||||| || ||  ||||||||||||||||| | |||||||||||    
T  36574601 gatataaaagggttacaagaaattagcttcaacaaactcacaaagaacaaatcttaatttctacc 36574665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 41649106 - 41649166
Alignment:
Q  136 ggttacaagaaattagattaaaaa-ctcacaaagaacaaaacctaatttctacccatttttc 196  Q
    |||||||||||||||| | || || ||||||||||||||| ||||||||||||| |||||||    
T  41649106 ggttacaagaaattagctaaacaagctcacaaagaacaaa-cctaatttctaccaatttttc 41649166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 317
Target Start/End: Original strand, 2479535 - 2479605
Alignment:
Q  248 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  2479535 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 2479605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 4253794 - 4253830
Alignment:
Q  313 acctcctttgatttcttaagtttctctctcttaaagc 349  Q
    |||||||||||||||  ||||||||||||||||||||    
T  4253794 acctcctttgatttcccaagtttctctctcttaaagc 4253830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 316
Target Start/End: Complemental strand, 33721600 - 33721387
Alignment:
Q  104 tctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 203  Q
    |||||||||||||||||| | | ||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||   ||||||||| | |||||    
T  33721600 tctgatccactatgataagaattatacaaagaggttacaagaaattagtttaaaaactcataaagaacaaaacctaattttcccccattttttaggtcac 33721501  T
Q  204 tcacactcacaa-tatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcc 300  Q
     |||||||  || |  ||||||||||||||  |||| ||| |||||||| ||| |||||||||||||  |||| || | | ||||||| |||||||||||    
T  33721500 acacactcctaaatgaatcctaagagaaaac-actaaagggagctttttcatcattccaataatgaaatctcacta-caaaggtgtttacaaatgtttcc 33721403  T
Q  301 caacccaagagaacct 316  Q
    ||||| ||||||||||    
T  33721402 caacctaagagaacct 33721387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 104 - 269
Target Start/End: Complemental strand, 30518169 - 30518006
Alignment:
Q  104 tctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 203  Q
    |||||||||||||||||| ||||||| |||||||||||| |||| ||  ||||||  |||||||||||||| | ||||||||||| ||||||||||| ||    
T  30518169 tctgatccactatgataagagtgatacaaagaggttacatgaaactaacttaaaagttcacaaagaacaaaccttaatttctacctatttttcaagttac 30518070  T
Q  204 tcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa 269  Q
     |||||||||||   |  || |||| |||| |||| |||||| |||||||||||||||||||||||    
T  30518069 ccacactcacaaatgaatcttagag-aaaacactaaaggaag-tttttgatccttccaataatgaa 30518006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 108 - 216
Target Start/End: Complemental strand, 1115141 - 1115033
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 207  Q
    |||||||||||||| | ||||| ||| |||||||||||||| |  |||||| |||| ||| |||||| ||||||||||| |||||||||||||||| |||    
T  1115141 atccactatgataagaatgatacaaataggttacaagaaatcaacttaaaagctcaaaaataacaaaccctaatttctatccatttttcaagtcacccac 1115042  T
Q  208 actcacaat 216  Q
    |||||||||    
T  1115041 actcacaat 1115033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 160 - 316
Target Start/End: Original strand, 14521785 - 14521944
Alignment:
Q  160 ctcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttc 259  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| ||||| |||||||||| |||| | || |||||| ||||| |||||||    
T  14521785 ctcacaaagaacacaacctaatttctacacatttttcatgtcacccacactctcaataaatcctaagag-aaaacattaaaggaagattttttatccttc 14521883  T
Q  260 caataatgaa---ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacct 316  Q
    ||||  ||||   |||| |||||| ||||||| | ||||||||||||||  |||||||||||    
T  14521884 caatggtgaaattctcactacccaaggtgtttac-aatgtttcccaaccctcaagagaacct 14521944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 317
Target Start/End: Complemental strand, 24435978 - 24435799
Alignment:
Q  138 ttacaagaaattagattaaaaactcacaaagaa-caaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatac 236  Q
    |||||||||||||| ||| || || ||||| || ||| |||||||||||||||||||||  | |||| |||| ||| |||  ||||||||||||||  ||    
T  24435978 ttacaagaaattagcttataagcttacaaaaaaacaagacctaatttctacccatttttata-tcacccacattcataatgaatcctaagagaaaac-ac 24435881  T
Q  237 tataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
     | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||| ||||||||||||    
T  24435880 aaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaactcaagagaacctc 24435799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 166 - 317
Target Start/End: Original strand, 31936695 - 31936844
Alignment:
Q  166 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataa 265  Q
    ||||||||| ||||||||||||||||||||||  |||| ||||||| ||||  |||||||||||||   ||   | ||||||||||||||||||||||      
T  31936695 aagaacaaatcctaatttctacccatttttcatatcacccacactctcaatgaatcctaagagaaa---acacaaagaagctttttgatccttccaatgg 31936791  T
Q  266 tgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||  |||| |||||| ||||||| | ||||||||||||||||| ||| ||||    
T  31936792 tgaaatctcactacccaaggtgtttac-aatgtttcccaacccaatagatcctc 31936844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 251
Target Start/End: Original strand, 99245 - 99357
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatac 236  Q
    ||||||||||||||| ||| || |||||| ||||||||   |||||||||||||||||| |||| |||||||||||||||  |||||| ||| |||||||    
T  99245 gttacaagaaattagcttagaagctcacagagaacaaactttaatttctacccattttt-aagttactcacactcacaatgaatcctatgag-aaaatac 99342  T
Q  237 tataggaagcttttt 251  Q
     | ||||||||||||    
T  99343 caaaggaagcttttt 99357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 108 - 312
Target Start/End: Complemental strand, 5572278 - 5572076
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||| ||||||    ||||| ||    
T  5572278 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacgcattttgt--gtcaccca 5572181  T
Q  207 cactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaac 304  Q
    ||||| ||||  ||||||||||||||  || | ||||||||||| |||| |||||||| ||||  |||| |||||| ||||||| ||| |||||||||||    
T  5572180 cactctcaatgaatcctaagagaaaac-acaaaaggaagctttt-gatcattccaatagtgaaatctcactacccaaggtgtttacaa-tgtttcccaac 5572084  T
Q  305 ccaagaga 312  Q
    ||||||||    
T  5572083 ccaagaga 5572076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 317
Target Start/End: Original strand, 31979602 - 31979781
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||||||||||  ||| || || ||||| |||||| |||||||||||||||||||||   ||||| ||||||| ||||  |||||||||| |||| |    
T  31979602 gttacaagaaattaacttataagcttacaaaagaacaagacctaatttctacccattttt-gtgtcacccacactctcaatgaatcctaagag-aaaaca 31979699  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | | ||||||| ||||||||||||||||  ||||  |||| |||||| ||||||| | |||||||| |||||||| ||||||||    
T  31979700 caaaaggaagc-ttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttctcaacccaaaagaacctc 31979781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 16569108 - 16569047
Alignment:
Q  135 aggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    ||||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||    
T  16569108 aggttacaagaaattagcttaaacaagctcacaaagaacaaaacctaatttctacccatttt 16569047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 108 - 263
Target Start/End: Complemental strand, 10077202 - 10077051
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||||||| | |||| || ||| | ||||||||||||||| ||| || || ||||| |||||| ||||||||||||||||||||    ||||| ||    
T  10077202 atccactatgatgaaagtgttacaaaaaagttacaagaaattagcttataagcttacaaaagaacaagacctaatttctacccatttt--gtgtcaccca 10077105  T
Q  207 cactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaat 263  Q
    ||||  ||||  |||||||||  |||| || | ||||||||||||||||||||||||    
T  10077104 cact--caatgaatcctaaga-taaaacacaaaaggaagctttttgatccttccaat 10077051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 108 - 232
Target Start/End: Complemental strand, 31076978 - 31076849
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatt-----tttcaagtca 202  Q
    |||||||| ||||| ||||||| |||  |||||||| ||||||| |||| |  ||||||||||||| ||||||||| || |||||     ||||||||||    
T  31076978 atccactaagataaaagtgatacaaatgggttacaataaattagcttaagagttcacaaagaacaagacctaatttttatccatttttaatttcaagtca 31076879  T
Q  203 ctcacactcacaatatatcctaagagaaaa 232  Q
    | |||| |||| ||  ||||||||||||||    
T  31076878 cccacaatcactatgaatcctaagagaaaa 31076849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 317
Target Start/End: Complemental strand, 5017402 - 5017324
Alignment:
Q  240 aggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||||||||| ||||||||||||  ||||  ||||||||||| ||||||| ||| ||||||||||||||||||| ||||    
T  5017402 aggaagcttttcgatccttccaatggtgaaatctcattacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 5017324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 95 - 317
Target Start/End: Complemental strand, 21801394 - 21801170
Alignment:
Q  95 gagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccattt 193  Q
    |||||||| ||  |||||||| ||||| |||| || |||   ||||||||||||||  ||| || || ||||| |||||| || ||||||||||||||||    
T  21801394 gagcagctctccaatccactaagataaaagtgttacaaaagagttacaagaaattatcttataagcttacaaaagaacaagacttaatttctacccattt 21801295  T
Q  194 ttcaagtcactcacactcacaa-tatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgc 290  Q
    |    ||||| ||||||| ||| |  | ||||||||||||  || | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| |    
T  21801294 tgt--gtcacccacactctcaaatgaaccctaagagaaaac-acaaaaggaagctttttgatccttccaatgttgaaatctcactacccaaggtgtttac 21801198  T
Q  291 aaatgtttcccaacc--caagagaacctc 317  Q
     ||||||||||||||  ||||||||||||    
T  21801197 -aatgtttcccaaccctcaagagaacctc 21801170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 33690846 - 33690738
Alignment:
Q  124 gtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcct 223  Q
    |||||| ||||| |||||||||||||| ||   || |||| |||||||||   ||||||||||| || ||||||||||||||| || ||| ||  |||||    
T  33690846 gtgatacaaagatgttacaagaaattatatcctaagctcaaaaagaacaagctctaatttctacacacttttcaagtcactcaaacccacgatgaatcct 33690747  T
Q  224 aagagaaaa 232  Q
    |||| ||||    
T  33690746 aagaaaaaa 33690738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 22424922 - 22424983
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttttc 196  Q
    |||||||||||||||| ||||| |  ||||||||||||||  |||||||||||||||||||||    
T  22424922 ggttacaagaaattagcttaaacaagctcacaaagaacaac-cctaatttctacccatttttc 22424983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 31086510 - 31086423
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||| | |||| || ||||  ||||||||||||||| ||| || || ||| |||| ||| ||||||||||||||||||||    
T  31086510 atccactatgatgaaagtgttacaaaggagttacaagaaattagcttataagcttacacaagagcaagacctaatttctacccatttt 31086423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 231
Target Start/End: Complemental strand, 31419035 - 31418929
Alignment:
Q  125 tgatataaagaggttacaagaaattagattaaaaa-ctcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcct 223  Q
    ||||| ||||| |||||||||||||| ||||| || ||| ||||||||||    |||||||| || ||||||||||||||||| || ||||| | || ||    
T  31419035 tgatacaaagaagttacaagaaattatattaacaagctctcaaagaacaatctttaatttcttcc-atttttcaagtcactcaaacccacaacaaattct 31418937  T
Q  224 aagagaaa 231  Q
    ||||||||    
T  31418936 aagagaaa 31418929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 5017488 - 5017430
Alignment:
Q  137 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttt 194  Q
    ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||    
T  5017488 gttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccatttt 5017430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 2973034 - 2973093
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||||||| || || |  ||||||||||||||| |||||||||||||||||||    
T  2973034 ggttacaagaaattagcttcaacaagctcacaaagaacaaa-cctaatttctacccatttt 2973093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 28137503 - 28137562
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||||||| ||||| |  ||||||||||||||  |||||||||||||||||||    
T  28137503 ggttacaagaaattagcttaaacaagctcacaaagaacaac-cctaatttctacccatttt 28137562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 4045319 - 4045283
Alignment:
Q  313 acctcctttgatttcttaagtttctctctcttaaagc 349  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  4045319 acctccattgatttctcaagtttctctctcttaaagc 4045283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 16567265 - 16567210
Alignment:
Q  141 caagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    ||||||||||| ||||| |  |||||||| |||||||||||||||||| |||||||    
T  16567265 caagaaattagcttaaacaagctcacaaaaaacaaaacctaatttctaaccatttt 16567210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 5e-35; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 108 - 263
Target Start/End: Original strand, 2630291 - 2630445
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 207  Q
    |||||||||||| | ||||||| |||  |||||||| ||||||| |||||||| |||||||||||||||||||||| ||  ||||||||||||||| | |    
T  2630291 atccactatgatgaaagtgatacaaaagggttacaataaattagcttaaaaacacacaaagaacaaaacctaatttttatacatttttcaagtcaccctc 2630390  T
Q  208 actcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaat 263  Q
    |||||||||  |||||||||| |||| |||| ||||||||||||||||||| ||||    
T  2630391 actcacaatgaatcctaagag-aaaacactaaaggaagctttttgatcctttcaat 2630445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 33030949 - 33030854
Alignment:
Q  136 ggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaa 231  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  33030949 ggttacaagaaattagcttaaaagctcacaaagaacaaaacataatttctacccatttttcaagtcactcacactctcaatgaatcctaagagaaa 33030854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 108 - 317
Target Start/End: Complemental strand, 11181869 - 11181660
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||| ||| | ||||||| |||   |||||||||||||||  ||||| ||| |||| |||||| |||||||||||||||||||| || ||||| ||    
T  11181869 atccactaagatgaaagtgatacaaatgagttacaagaaattagcctaaaagctctcaaatgaacaagacctaatttctacccatttt-catgtcaccca 11181771  T
Q  207 cactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaact--cattacccatggtgtttgcaaatgtttcccaac 304  Q
    ||||||||||  ||||||||||||||  || | ||||||||||||||||||||||||  |||| |  || |||||| ||||||| ||| |||||||||||    
T  11181770 cactcacaatgaatcctaagagaaaac-acaaaaggaagctttttgatccttccaatggtgaaatttcactacccaaggtgtttacaa-tgtttcccaac 11181673  T
Q  305 ccaagagaacctc 317  Q
    |||||||||||||    
T  11181672 ccaagagaacctc 11181660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 81 - 232
Target Start/End: Original strand, 6741885 - 6742036
Alignment:
Q  81 tactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaa 180  Q
    ||||| || ||||||||||||| ||  ||||| || |||   ||||||| ||||| ||||||||||||||| ||  ||||||||||||||||||||||||    
T  6741885 tactctgggggatagagcagctctccaatccattaagatggaagtgatacaaagaagttacaagaaattagcttgcaaactcacaaagaacaaaacctaa 6741984  T
Q  181 tttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa 232  Q
    ||||||| ||||||||||||||| ||||||| ||||  ||||||||| ||||    
T  6741985 tttctactcatttttcaagtcacccacactctcaatgaatcctaagaaaaaa 6742036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 123 - 317
Target Start/End: Complemental strand, 7160925 - 7160732
Alignment:
Q  123 agtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcc 222  Q
    ||||||| |||| |||||||| |||||||||| ||| |||||||||||||| || ||||||||||  |||||| |||||||| |||||| ||||  ||||    
T  7160925 agtgatacaaaggggttacaaaaaattagatttaaagctcacaaagaacaagacttaatttctacatattttttaagtcact-acactctcaatgaatcc 7160827  T
Q  223 taagagaaaa-atactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    |||||||||| |||  ||  |||||||||||||||||||||| |||||  |||| |  ||| |||| || | |||||||||||| |||||||||||||    
T  7160826 taagagaaaacataaaat--gaagctttttgatccttccaatgatgaaatctcactgtccaaggtgattac-aatgtttcccaatccaagagaacctc 7160732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 317
Target Start/End: Original strand, 28832386 - 28832526
Alignment:
Q  177 ctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcat 274  Q
    |||||||||||||||||||||  |||| ||||||| ||||  |||||||||| |||| || | ||||||||||||||||||||||||  ||||  ||||     
T  28832386 ctaatttctacccatttttcatatcacccacactctcaatgaatcctaagag-aaaacacaaaaggaagctttttgatccttccaatggtgaaatctcac 28832484  T
Q  275 tacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    |||||| ||||||| | ||||||||||||||||||||||||||    
T  28832485 tacccaaggtgtttac-aatgtttcccaacccaagagaacctc 28832526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 104 - 308
Target Start/End: Original strand, 5611198 - 5611403
Alignment:
Q  104 tctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 203  Q
    |||||||||||||||||| | ||||| |||||| ||| || ||||||| ||||||  ||||||||||||||| || ||||||| |||||||| ||||||     
T  5611198 tctgatccactatgataaaactgatacaaagagattaaaaaaaattagcttaaaagttcacaaagaacaaaatcttatttctatccattttt-aagtcat 5611296  T
Q  204 tcacactca-caatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcc 300  Q
      |||||||  |||   ||||||||| |||| |||| || ||||||||||||| || ||||||||||  ||||||| | | ||||||| | |||||||||    
T  5611297 aaacactcataaatgattcctaagag-aaaacactaaagcaagctttttgatcttttcaataatgaaatctcattaactaaggtgtttaccaatgtttcc 5611395  T
Q  301 caacccaa 308  Q
    ||| ||||    
T  5611396 caatccaa 5611403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 94 - 317
Target Start/End: Original strand, 10281797 - 10282023
Alignment:
Q  94 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatt 192  Q
    ||||||||| ||  |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||    
T  10281797 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagcttacacaagaacaagacctaatttctacccatt 10281896  T
Q  193 tttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgttt 288  Q
    ||    ||||| ||||||||||||||  |||||||||| |||| || | || |||||||||||||||||||||  ||||  |||| |||||| |||||||    
T  10281897 tt--gtgtcacccacactcacaatatgaatcctaagag-aaaacacaaaagaaagctttttgatccttccaatggtgaaatctcactacccaaggtgttt 10281993  T
Q  289 gcaaatgtttcccaacc--caagagaacctc 317  Q
     | |||||||| |||||  ||||||||||||    
T  10281994 ac-aatgtttcacaaccctcaagagaacctc 10282023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 166 - 317
Target Start/End: Complemental strand, 17003938 - 17003787
Alignment:
Q  166 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaat 263  Q
    |||||||| |||||||||||||||||||   |  |||||||| ||||||||||  ||||||||||||||  || | ||||||||||||||||||||||||    
T  17003938 aagaacaagacctaatttctacccattta--atttcactcactctcacaatatgaatcctaagagaaaac-acaaaaggaagctttttgatccttccaat 17003842  T
Q  264 aatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
      ||||  |||| |||||| ||||||| | ||||||||| ||||||||||||||||    
T  17003841 ggtgaaatctcactacccaaggtgtttac-aatgtttccaaacccaagagaacctc 17003787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 166 - 317
Target Start/End: Complemental strand, 31300574 - 31300423
Alignment:
Q  166 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataa 265  Q
    ||||||||  |||||||||||||||||| |||  |||| ||||||| ||||  |||||||||| |||| || | ||||||| ||||||||||||||||      
T  31300574 aagaacaagtcctaatttctacccatttctcatatcacccacactctcaatgaatcctaagag-aaaacacaaaaggaagccttttgatccttccaatgg 31300476  T
Q  266 tgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||  |||| |||||| ||||||| | |||||||| |||||||||||||||||    
T  31300475 tgaaatctcactacccaaggtgtttac-aatgtttctcaacccaagagaacctc 31300423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 3880345 - 3880514
Alignment:
Q  94 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatt 192  Q
    ||||||||| ||  |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||    
T  3880345 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagtttacaagcttacacaagaacaagacctaatttctacccatt 3880444  T
Q  193 tttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaat 263  Q
    ||    ||||| ||| ||||||||||  |||||| |||||||| || | ||||||||||||||||||||||||    
T  3880445 tt--gtgtcacccactctcacaatatgaatcctaggagaaaaa-acaaaaggaagctttttgatccttccaat 3880514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 297
Target Start/End: Original strand, 30899933 - 30900116
Alignment:
Q  114 tatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcac 213  Q
    ||||| || ||||||| |||||||||||||||||||||  || || |||||||||||||||  ||| |||||||  |||||||||| |||||| || |||    
T  30899933 tatgagaagagtgatacaaagaggttacaagaaattagcctacaagctcacaaagaacaaactctattttctactgatttttcaagccactcaaacccac 30900032  T
Q  214 aatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtt 297  Q
    ||   ||||| |||| |||| |||| || ||||||||| ||||||||  |||||||  |||| |||||| |||||||  |||||||    
T  30900033 aaagaatcct-agag-aaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttataaatgtt 30900116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 94 - 230
Target Start/End: Original strand, 34842649 - 34842785
Alignment:
Q  94 agagcagctatctgatccactatgataat-agtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatt 192  Q
    ||||||||| ||| |||||||||| |||| ||||||| |||||||||||||||  |||  ||| || ||||| ||||||| | |||||||||||| ||||    
T  34842649 agagcagctctctaatccactatg-taatgagtgatacaaagaggttacaagatgttatcttacaagctcaccaagaacatatcctaatttctactcatt 34842747  T
Q  193 tttcaagtcactcacactcacaatatatcctaagagaa 230  Q
    |||||||||||| | || ||||||  || |||||||||    
T  34842748 tttcaagtcactaaaacccacaatgaattctaagagaa 34842785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 137 - 263
Target Start/End: Complemental strand, 42127419 - 42127293
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||||||||||| ||| || || ||||| ||||||  |||| |||||||||||||||||  |||| ||||||| ||||  |||||||||| |||| |    
T  42127419 gttacaagaaattagcttataagcttacaaaagaacaagtcctactttctacccatttttcatatcacccacactctcaatgaatcctaagag-aaaaca 42127321  T
Q  236 ctataggaagctttttgatccttccaat 263  Q
    | | || |||||||||||||||||||||    
T  42127320 caaaagaaagctttttgatccttccaat 42127293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 94 - 317
Target Start/End: Complemental strand, 12084226 - 12084005
Alignment:
Q  94 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatt 192  Q
    ||||||||| ||  |||||||||||| | |||| || |||||| |||||||||||||  |||||| || ||| |||||||| ||||||||||||||||||    
T  12084226 agagcagctctccaatccactatgatgaaagtgttacaaagag-ttacaagaaattaacttaaaagcttacacaagaacaagacctaatttctacccatt 12084128  T
Q  193 tttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttcc-aataatgaa--ctcattacccatggtgtt 287  Q
    | |   ||||| ||| ||||||||||  ||||||||| ||||| || | |||||||||||  |||||||| |||  ||||  |||| |||||| ||||||    
T  12084127 tgt---gtcacccactctcacaatatgaatcctaaga-aaaaacacaaaaggaagctttt--atccttccaaatggtgaattctcactacccaaggtgtt 12084034  T
Q  288 tgcaaatgtttcccaacccaagagaacctc 317  Q
    |  |||||||| ||||||||||||| ||||    
T  12084033 t-aaaatgtttaccaacccaagagatcctc 12084005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 3651613 - 3651658
Alignment:
Q  161 tcacaaagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  3651613 tcacaaagaacaaaccctaatttctacccatttttcaagtcactca 3651658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 317
Target Start/End: Complemental strand, 24553496 - 24553355
Alignment:
Q  176 cctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctca 273  Q
    |||||||||||||||||||| |  | || |||||||  |||  || |||||||||||  || | |||||||||||||||||||| |||  ||||  ||||    
T  24553496 cctaatttctacccattttttatatgacccacactcttaatgaattctaagagaaaac-acaaaaggaagctttttgatccttctaatggtgaaatctca 24553398  T
Q  274 ttacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
     |||||| ||||||| ||| ||||||||||||||||||||||||    
T  24553397 ctacccaaggtgtttacaa-tgtttcccaacccaagagaacctc 24553355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 31336153 - 31336262
Alignment:
Q  123 agtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcc 222  Q
    ||||||| |||||| ||||||||||||||||    | ||||| ||||| ||| ||| |||| || ||||||| ||||||||||| || ||||||| ||||    
T  31336153 agtgatacaaagagcttacaagaaattagatcccgatctcactaagaaaaaatccttatttatatccatttt-caagtcactcaaacccacaataaatcc 31336251  T
Q  223 taagagaaaaa 233  Q
    |||||||||||    
T  31336252 taagagaaaaa 31336262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 33831753 - 33831692
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttttc 196  Q
    |||||||||||||||| ||||| |  ||||||||||||||| |||||||||||||||||||||    
T  33831753 ggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccatttttc 33831692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 317
Target Start/End: Original strand, 19588806 - 19589014
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||||||| | |||| || |||   ||||||||||||||  ||| || || ||| |||||||| |||||||||||||||  ||||   ||||| ||    
T  19588806 atccactatgatgaaagtgttacaaaagagttacaagaaattaccttataagcttacacaagaacaagacctaatttctaccc--tttttgtgtcaccca 19588903  T
Q  207 cactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaac 304  Q
    || || ||||  |||||||||| |||| || | |||||| |||||||||||||||||  ||||  |||| | |||| | ||||| | |||||||||||||    
T  19588904 caatctcaatgaatcctaagag-aaaacacaaaaggaagatttttgatccttccaatggtgaaatctcactgcccaagatgtttac-aatgtttcccaac 19589001  T
Q  305 ccaagagaacctc 317  Q
    |||||||| ||||    
T  19589002 ccaagagatcctc 19589014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 3075753 - 3075812
Alignment:
Q  136 ggttacaagaaattagattaa--aaactcacaaagaacaaaacctaatttctacccatttt 194  Q
    ||||||||||||||||||| |  || |||||||||||| |||||||||||||||| |||||    
T  3075753 ggttacaagaaattagattcagcaagctcacaaagaac-aaacctaatttctacctatttt 3075812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 8566041 - 8566100
Alignment:
Q  136 ggttacaagaaattagattaa--aaactcacaaagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||||||| ||||  || |||||||||||| |||||||| |||||||||||||    
T  8566041 ggttacaagaaattagcttaaacaagctcacaaagaac-aaacctaagttctacccatttt 8566100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 317
Target Start/End: Complemental strand, 11916871 - 11916800
Alignment:
Q  247 tttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    |||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  11916871 tttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 11916800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 31183045 - 31182986
Alignment:
Q  136 ggttacaagaaattagattaaa--aactcacaaagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||||||  |||||  ||||||||||||||||  |||||||||||||||||||    
T  31183045 ggttacaagaaattaacttaaacaaactcacaaagaacaat-cctaatttctacccatttt 31182986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 317
Target Start/End: Complemental strand, 9353230 - 9353160
Alignment:
Q  248 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  9353230 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 9353160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 196
Target Start/End: Complemental strand, 19806432 - 19806395
Alignment:
Q  157 aaactcacaaagaacaaaacctaatttctacccatttttc 196  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  19806432 aaactcacaaagaacaa--cctaatttctacccatttttc 19806395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 5e-32; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 77 - 211
Target Start/End: Complemental strand, 4386985 - 4386851
Alignment:
Q  77 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaac 176  Q
    ||||||||| || ||| ||||||||| ||  ||||| || ||||| ||||||| |||  |||||||||||||||| |||||| |||||||||||||||||    
T  4386985 gacctactctgggggagagagcagctctccaatccaataagataaaagtgatacaaatgggttacaagaaattagcttaaaagctcacaaagaacaaaac 4386886  T
Q  177 ctaatttctacccatttttcaagtcactcacactc 211  Q
    ||||||||||| ||||||||||||||| |||||||    
T  4386885 ctaatttctactcatttttcaagtcacccacactc 4386851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 137 - 313
Target Start/End: Complemental strand, 3328355 - 3328178
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||||||||||| ||| || || ||||| ||||||  ||||||||||||||||||||||  |||| ||||||| |||| ||||||||||| |||| |    
T  3328355 gttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccatttttcatatcacccacactctcaatgtatcctaagag-aaaaca 3328257  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaa 313  Q
    | | |||||| |||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||| ||||||||||||||    
T  3328256 caaaaggaagttttttgatccttccaatgctgaaatctcactacccaaggtgtttac-aatgttttccaacccaagagaa 3328178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 29100220 - 29100324
Alignment:
Q  109 tccactatgataat-agtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 207  Q
    |||||||||||||  ||||||| |||||||||| |||||||||| |||||||||||||||||||||| |||||||||||| | |||||||||||||  ||    
T  29100220 tccactatgataaagagtgatacaaagaggttataagaaattagcttaaaaactcacaaagaacaaaccctaatttctactcgtttttcaagtcacctac 29100319  T
Q  208 actca 212  Q
    |||||    
T  29100320 actca 29100324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 104 - 310
Target Start/End: Complemental strand, 5366355 - 5366146
Alignment:
Q  104 tctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 203  Q
    |||||||||||||||| | ||||||| ||||||||||||||||||||  |||||| ||||||| ||| ||| | |||||||||||| |||||| ||||||    
T  5366355 tctgatccactatgatgaaagtgatacaaagaggttacaagaaattatcttaaaatctcacaatgaaaaaatcttaatttctacccttttttctagtcac 5366256  T
Q  204 tcacactca-caatatatcctaagagaaaaatactataggaagctttttgatccttccaa-taatgaa--ctcattacccatggtgtttgcaaatgtttc 299  Q
     |||||| |  |||  |||||||| | |||| |||| ||||| ||||| ||||||||||| || ||||  || | |||||| ||||||| |||||||||     
T  5366255 ccacactaataaatgaatcctaagcg-aaaacactaaaggaaacttttcgatccttccaattattgaaatcttactacccaaggtgtttacaaatgtttt 5366157  T
Q  300 ccaacccaaga 310  Q
    ||||| |||||    
T  5366156 ccaactcaaga 5366146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 317
Target Start/End: Complemental strand, 40592780 - 40592599
Alignment:
Q  137 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaa 233  Q
    ||||||||||||||| ||| || || ||| |||||||||| ||||||||||||||||||    ||||| ||| ||||||||||  |||||||||| ||||    
T  40592780 gttacaagaaattagcttacaagcttacacaagaacaaaatctaatttctacccatttt--gtgtcacccactctcacaatatgaatcctaagag-aaaa 40592684  T
Q  234 tactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
     || | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||||||||||| ||||    
T  40592683 cacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccaagagatcctc 40592599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 108 - 263
Target Start/End: Original strand, 21353622 - 21353776
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 207  Q
    |||||||| ||| | ||||||| |||   |||||||||||||||   || | ||||||||||||| |||||||||||||||||||||||| | |||||||    
T  21353622 atccactaagatgaaagtgatacaaatgagttacaagaaattagcacaagagctcacaaagaacacaacctaatttctacccatttttcatgccactcac 21353721  T
Q  208 actcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaat 263  Q
    ||| |||||  ||| |||||| |||| |||| ||||| ||||| ||||||||||||    
T  21353722 acttacaatgaatcttaagag-aaaacactaaaggaaacttttggatccttccaat 21353776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 108 - 317
Target Start/End: Original strand, 36029153 - 36029362
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| ||||| ||| |||||||| ||||||||||||||||||||    ||||||||    
T  36029153 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaaacttacacaagaacaagacctaatttctacccatttt--gtgtcactca 36029250  T
Q  207 cactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccca 302  Q
    | |||| |||||  |||||||||| |||| || | ||||||| ||||||||||||||||  ||||  |||| |||||| ||||||| | |||||||||||    
T  36029251 ctctcaaaatatgaatcctaagag-aaaacacaaaaggaagc-ttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttccca 36029347  T
Q  303 acccaagagaacctc 317  Q
    |||||||||| ||||    
T  36029348 acccaagagatcctc 36029362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 137 - 317
Target Start/End: Complemental strand, 3323689 - 3323508
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||||||||||| ||| || || ||||| ||||||  | ||||||||||||||| ||||  |||| ||||||| ||||  || |||||||||||  |    
T  3323689 gttacaagaaattagcttataagcttacaaaagaacaagtcataatttctacccattgttcatatcacccacactctcaatgaattctaagagaaaac-a 3323591  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | | |||||||||||||||| |||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||||||||    
T  3323590 caaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagaacctc 3323508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 137 - 317
Target Start/End: Original strand, 8126719 - 8126899
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||||||||||| ||| || || ||||| |||||| || ||||||||||||||||||   ||||| ||||||| ||||  ||| ||||||||||  |    
T  8126719 gttacaagaaattagcttataagcttacaaaagaacaatacttaatttctacccatttttgt-gtcacccacactctcaatgaatcttaagagaaaac-a 8126816  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | | | |||||||||||||||||||||| |||||  |||| |||||| ||||||| | ||||||||||||||||||| ||||||    
T  8126817 caaaaagaagctttttgatccttccaatgatgaaatctcactacccaaggtgtttac-aatgtttcccaacccaagaaaacctc 8126899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 104 - 308
Target Start/End: Original strand, 21156485 - 21156690
Alignment:
Q  104 tctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 203  Q
    |||||||||||||||||| | ||||| |||||| ||| || ||||||| ||||||  ||||||||||||||| || ||||||| |||||||| ||||||     
T  21156485 tctgatccactatgataaaactgatacaaagagattaaaaaaaattagcttaaaagttcacaaagaacaaaatcttatttctatccattttt-aagtcat 21156583  T
Q  204 tcacactca-caatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcc 300  Q
      |||||||  |||   ||||||||| |||| |||| || ||||||||||||| || ||||||||||  ||||||| | | ||||||| | |||||||||    
T  21156584 aaacactcataaatgattcctaagag-aaaacactaaagcaagctttttgatcttttcaataatgaaatctcattaactaaggtgtttaccaatgtttcc 21156682  T
Q  301 caacccaa 308  Q
    ||| ||||    
T  21156683 caatccaa 21156690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 25517069 - 25517148
Alignment:
Q  135 aggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcaca 214  Q
    |||||| |||||||||| |||||| ||||||||||||||| ||||||||||||  |||||||||||||| ||||||||||    
T  25517069 aggttataagaaattagcttaaaagctcacaaagaacaaaccctaatttctacttatttttcaagtcacccacactcaca 25517148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 5797204 - 5797305
Alignment:
Q  112 actatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactc 211  Q
    ||||||| |||||||||| || |||||||||||||||||||||  ||||||||||| ||||||  |||||||||  ||||||||||||||||| | ||||    
T  5797204 actatgaaaatagtgatacaa-gaggttacaagaaattagattccaaactcacaaataacaaactctaatttctttccatttttcaagtcacttaaactc 5797302  T
Q  212 aca 214  Q
    |||    
T  5797303 aca 5797305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 108 - 317
Target Start/End: Original strand, 35925540 - 35925747
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaa-agaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||||||| | |||| || |||||| |||||||||||||| ||| || || |||  ||||||||||||||||||||||||||| |   ||||| ||    
T  35925540 atccactatgatgaaagtgttacaaagag-ttacaagaaattagtttataagcttacactagaacaaaacctaatttctacccatttgt---gtcaccca 35925635  T
Q  207 cactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccca 302  Q
    | ||||||||||  |||||||||| |||| || | ||||||| ||||||||||||||||  ||||  |||| |||||| ||||||| | |||||||||||    
T  35925636 ctctcacaatatgaatcctaagag-aaaacacaaaaggaagc-ttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttccca 35925732  T
Q  303 acccaagagaacctc 317  Q
    |||||| ||| ||||    
T  35925733 acccaaaagatcctc 35925747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 77 - 317
Target Start/End: Complemental strand, 8370544 - 8370306
Alignment:
Q  77 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaa 175  Q
    |||||| || || ||| ||||||||| ||  |||||||||||| | |||| || |||||| |||||||||||||| |||||| || ||| |||||||| |    
T  8370544 gacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagag-ttacaagaaattagcttaaaagcttacacaagaacaaga 8370446  T
Q  176 cctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ct 271  Q
    | |||||||||||||||| |   ||||| ||| ||||||||||  ||||||||||||||  || | ||||| ||||| ||||||||||||  ||||  ||    
T  8370445 cataatttctacccatttgt---gtcacccactctcacaatatgaatcctaagagaaaac-acaaaaggaaactttt-gatccttccaatggtgaaatct 8370351  T
Q  272 cattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    || |||||| | ||||| ||| ||||||||||||||||||| ||||    
T  8370350 cactacccaagatgtttacaa-tgtttcccaacccaagagatcctc 8370306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 317
Target Start/End: Complemental strand, 24695162 - 24694983
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||||||||||| ||| ||||| ||||| |||||| ||||||||||||||||||||    ||||| ||||||| ||||  ||||||| || |||| |    
T  24695162 gttacaagaaattagcttataaacttacaaaagaacaagacctaatttctacccatttt--gtgtcacccacactctcaatgaatcctaaaag-aaaaca 24695066  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | | |||||||||||||||| |||||||  ||||  ||||  ||||| ||||||| | ||||||||||||||||||||| ||||    
T  24695065 caaaaggaagctttttgatcattccaatggtgaaatctcaccacccaaggtgtttac-aatgtttcccaacccaagagatcctc 24694983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 108 - 263
Target Start/End: Original strand, 40844711 - 40844864
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||    ||||| ||    
T  40844711 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccatttt--gtgtcaccca 40844808  T
Q  207 cactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaat 263  Q
    ||||| ||||  |||||||||| |||| || | ||||||||||||||||||||||||    
T  40844809 cactctcaatgaatcctaagag-aaaacacaaaaggaagctttttgatccttccaat 40844864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 317
Target Start/End: Complemental strand, 1417489 - 1417308
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    |||| |||||||||| ||| ||||| ||||| ||||||  ||||||||||||||||||||||  |||| ||||||| ||||  |||||||||| |||| |    
T  1417489 gttataagaaattagcttataaacttacaaaagaacaagtcctaatttctacccatttttcatatcacccacactcccaatgaatcctaagag-aaaaca 1417391  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    | | || || ||||||||||||| ||||  ||||  |||| |||| |  |||||| | ||||||||||||||||||| ||||||    
T  1417390 caaaagaaaactttttgatcctttcaatggtgaaatctcactacctaaagtgtttac-aatgtttcccaacccaagataacctc 1417308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 303
Target Start/End: Complemental strand, 18552910 - 18552716
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||    ||||| ||    
T  18552910 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccatttt--gtgtcaccca 18552813  T
Q  207 cactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaa 303  Q
    ||||| ||||  |||||||||| |||| || | |||||| |||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||    
T  18552812 cactctcaatgaatcctaagag-aaaacacaaaaggaagttttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaa 18552716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 306
Target Start/End: Original strand, 25795870 - 25796038
Alignment:
Q  137 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa-at 234  Q
    ||||||||||||||| ||| || || ||||| |||||| ||||||||||||||||||||    ||||| ||||||| ||||  |||||||||||||| ||    
T  25795870 gttacaagaaattagcttataagcttacaaaagaacaagacctaatttctacccatttt--gtgtcacccacactctcaatgaatcctaagagaaaacat 25795967  T
Q  235 actataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaaccc 306  Q
    |  | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | | |||||||||||||    
T  25795968 a--aaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-attgtttcccaaccc 25796038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 137 - 317
Target Start/End: Complemental strand, 3716000 - 3715817
Alignment:
Q  137 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaa 233  Q
    ||||||||||||||| ||| ||||| ||| |||||||| || |||||||||||||||||    ||||| |||  |||||||||  |||||||||| ||||    
T  3716000 gttacaagaaattagcttacaaacttacacaagaacaagacttaatttctacccatttt--gtgtcacccactttcacaatatgaatcctaagag-aaaa 3715904  T
Q  234 tactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 317  Q
     || | || |||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||||  ||||||||||||    
T  3715903 cacaaaagaaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 3715817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 77 - 317
Target Start/End: Original strand, 21711252 - 21711491
Alignment:
Q  77 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaa 175  Q
    |||||| || || ||| ||||||||| ||  |||||||||||| | |||| || |||||| |||||||||||||| |||||| || ||| |||| ||| |    
T  21711252 gacctaatctgggggagagagcagctctcaaatccactatgatgaaagtgttacaaagag-ttacaagaaattagcttaaaagcttacacaagagcaaga 21711350  T
Q  176 cctaatttctacccatttttcaagtcactcacactcacaata---tatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--c 270  Q
    |||||||||||||||||| |   || || ||||||| |||||    |||||||||| |||| || | ||||||| ||||||||||||||||  ||||  |    
T  21711351 cctaatttctacccatttgt---gttacccacactctcaataatgaatcctaagag-aaaacacaaaaggaagc-ttttgatccttccaatggtgaaatc 21711445  T
Q  271 tcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||| ||| || ||||||| | ||||||||||||||||||||| ||||    
T  21711446 tcactactcaaggtgtttac-aatgtttcccaacccaagagatcctc 21711491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 317
Target Start/End: Original strand, 26299077 - 26299257
Alignment:
Q  137 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 235  Q
    ||||||||||||||| ||| ||||| | | |||||||| ||||||||||||||||||||    ||||| |||| || ||||  ||||||||||||||       
T  26299077 gttacaagaaattagcttataaacttagacaagaacaagacctaatttctacccatttt--gtgtcacccacaatctcaattaatcctaagagaaaacac 26299174  T
Q  236 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
      | |||||||||||||||  |||||||  ||||  |||| |||||| ||||||| | ||||||||||||||||||||| ||||    
T  26299175 aaaaaggaagctttttgataattccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccaagagatcctc 26299257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 312
Target Start/End: Complemental strand, 47923904 - 47923726
Alignment:
Q  137 gttacaagaaattagattaaaaact--cacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat---atcctaagagaaa 231  Q
    ||||||||||||||| ||||||  |  |||||||| ||||||||||||| ||||||||||    ||||  ||||||| |||||    |||||| ||||||    
T  47923904 gttacaagaaattagcttaaaagtttacacaaagagcaaaacctaatttatacccattttgt--gtcatccacactctcaataatgaatcctacgagaaa 47923807  T
Q  232 aatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagaga 312  Q
    |  || | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | |||||||||||||||||||||    
T  47923806 ac-acaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccaagaga 47923726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 206
Target Start/End: Complemental strand, 41163258 - 41163174
Alignment:
Q  123 agtgatataaagaggttacaagaaattagattaaaaa-ctcacaaagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    ||||||| ||||||||| ||| |||||||||  |||| |||| |||||||||| ||||||||| ||||| || ||||||||||||    
T  41163258 agtgatacaaagaggttccaaaaaattagatccaaaagctcataaagaacaaaccctaatttcgacccagttatcaagtcactca 41163174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 317
Target Start/End: Complemental strand, 1736332 - 1736121
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||||||||| | |||| || |||   ||||||||||||||  ||| || || ||| |||||||| ||||||||||||||||||||    |||||  |    
T  1736332 atccactatgatgaaagtgttacaaaagagttacaagaaattaacttataagcttacacaagaacaagacctaatttctacccattttgt--gtcaccaa 1736235  T
Q  207 cactcacaatat---atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccc 301  Q
    ||||| |||||    ||||||||||||||  || | | ||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||    
T  1736234 cactctcaataatgaatcctaagagaaaac-acaaaaagaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttccc 1736137  T
Q  302 aacccaagagaacctc 317  Q
    ||||||| ||| ||||    
T  1736136 aacccaatagatcctc 1736121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 9666562 - 9666623
Alignment:
Q  137 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttttc 196  Q
    ||||||||||||||| || || |  |||||||||||||||| ||||||||||||||||||||    
T  9666562 gttacaagaaattagcttcaacaagctcacaaagaacaaaatctaatttctacccatttttc 9666623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 94 - 317
Target Start/End: Complemental strand, 6794754 - 6794532
Alignment:
Q  94 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaa-ttagattaaaaactcaca-aagaacaaaacctaatttctacccat 191  Q
    ||||||||| ||  |||||||||||| | |||| || |||||| |||||||||| |||| ||  || || ||| ||||||||  ||||||||||||||||    
T  6794754 agagcagctctccaatccactatgatgaaagtgttacaaagag-ttacaagaaaattagcttgcaagcttacacaagaacaagtcctaatttctacccat 6794656  T
Q  192 ttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtt 287  Q
    || |   ||||| ||| ||||||||||  | |||||||||||| ||| | ||||||||||| | || |||||||  ||||  |||| |||||| ||||||    
T  6794655 ttgt---gtcacccactctcacaatatgaaccctaagagaaaa-tacaaaaggaagctttt-gttcattccaatggtgaaatctcactacccaaggtgtt 6794561  T
Q  288 tgcaaatgtttcccaacccaagagaacctc 317  Q
    | ||| ||||||||||| ||||||||||||    
T  6794560 tacaa-tgtttcccaactcaagagaacctc 6794532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 22835097 - 22835156
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||||||| ||||| |  ||||||||||||||| |||||||||||||||||||    
T  22835097 ggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccatttt 22835156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 29196584 - 29196625
Alignment:
Q  276 acccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||| ||||||| ||||||||||||||||||||||||||||    
T  29196584 acccaaggtgtttacaaatgtttcccaacccaagagaacctc 29196625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 232
Target Start/End: Complemental strand, 44658521 - 44658396
Alignment:
Q  107 gatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    ||||||||| ||||| ||||||| ||| | ||||||| ||||||| | |  ||||||||||||| | |  |||||||||| |  | ||||||||||||||    
T  44658521 gatccactaggataagagtgatacaaaaatgttacaataaattagctcactaactcacaaagaagatattctaatttctatctgtatttcaagtcactca 44658422  T
Q  207 cactcacaatatatcctaagagaaaa 232  Q
     || ||||||  |||| |||||||||    
T  44658421 aacccacaattaatcccaagagaaaa 44658396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 25929365 - 25929270
Alignment:
Q  165 aaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa-atactataggaagctttttgatccttcc 260  Q
    ||||||||| ||||| ||||||| |||||| || ||||| ||||||||||||  |||||||||||||| | |  | | |||||||||||||||||||    
T  25929365 aaagaacaagacctagtttctactcatttt-catgtcacccacactcacaatgaatcctaagagaaaacacaaaaaaagaagctttttgatccttcc 25929270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 317
Target Start/End: Complemental strand, 26928486 - 26928416
Alignment:
Q  248 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||||||||||||||  ||||  ||||||||||| ||||||| ||| ||||||||||||||||||| ||||    
T  26928486 ttttgatccttccaatggtgaaatctcattacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 26928416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 32891176 - 32891117
Alignment:
Q  137 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    ||||||||||||||| || || |  ||||||||||||||||| |||||||||||||||||    
T  32891176 gttacaagaaattagcttcaacaagctcacaaagaacaaaacttaatttctacccatttt 32891117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 44700563 - 44700632
Alignment:
Q  126 gatataaagaggttacaagaaattagattaaa--aactcacaaagaacaaaacctaatttctacccatttt 194  Q
    |||| ||| ||||||||||||||||| || ||  ||||||||||||||||  |||||||||||||||||||    
T  44700563 gatacaaataggttacaagaaattagcttcaacaaactcacaaagaacaac-cctaatttctacccatttt 44700632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 44700675 - 44700714
Alignment:
Q  276 acccatggtgtttgcaaatgtttcccaacccaagagaacc 315  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  44700675 acccaaggtgtttacaaatgtttcccaacccaagagaacc 44700714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 194
Target Start/End: Original strand, 29196507 - 29196541
Alignment:
Q  160 ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    ||||||||||||||| |||||||||||||||||||    
T  29196507 ctcacaaagaacaaaccctaatttctacccatttt 29196541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 32744532 - 32744590
Alignment:
Q  137 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccattttt 195  Q
    ||||||||||||||| ||||| |  |||||||||||||||  |||||||||||||||||||    
T  32744532 gttacaagaaattagcttaaacaagctcacaaagaacaaa--ctaatttctacccattttt 32744590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 760920 - 760861
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||||||| ||||| |  ||||||||||||| | |||||||||||||||||||    
T  760920 ggttacaagaaattagcttaaacaagctcacaaagaacaga-cctaatttctacccatttt 760861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 5433961 - 5434025
Alignment:
Q  126 gatataaagaggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacc 188  Q
    ||||||||  |||||||||||||||| || || |  ||||||||||||||| |||||||||||||    
T  5433961 gatataaaagggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttctacc 5434025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 46860547 - 46860488
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    |||||||||||||||| || || |  ||||||||||||||| |||||||||||||||||||    
T  46860547 ggttacaagaaattagcttcaacaagctcacaaagaacaaa-cctaatttctacccatttt 46860488  T

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Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 9581355 - 9581297
Alignment:
Q  136 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccattt 193  Q
    ||||| |||||||||| ||||| |  ||||||||||||||| ||||||||||||||||||    
T  9581355 ggttaaaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccattt 9581297  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 317
Target Start/End: Original strand, 16264548 - 16264618
Alignment:
Q  248 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  16264548 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 16264618  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 317
Target Start/End: Complemental strand, 27986343 - 27986273
Alignment:
Q  248 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  27986343 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 27986273  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 204
Target Start/End: Original strand, 37387546 - 37387574
Alignment:
Q  176 cctaatttctacccatttttcaagtcact 204  Q
    |||||||||||||||||||||||||||||    
T  37387546 cctaatttctacccatttttcaagtcact 37387574  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 39153457 - 39153515
Alignment:
Q  137 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 194  Q
    ||||||||||||||| ||||| |  ||||||| ||||||| |||||||||||||||||||    
T  39153457 gttacaagaaattagcttaaacaagctcacaatgaacaaa-cctaatttctacccatttt 39153515  T

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Target: scaffold0002 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 308
Target Start/End: Original strand, 14748 - 14943
Alignment:
Q  114 tatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcac 213  Q
    |||||||| ||||||| ||||||||||| ||||||||| |||||| |||||||||||| || |||| || ||||| |||||||||||||| |||||||||    
T  14748 tatgataagagtgatacaaagaggttacgagaaattagcttaaaagctcacaaagaactaaccctagttcctacctatttttcaagtcacccacactcac 14847  T
Q  214 aa--tatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaa 308  Q
    ||  |  |||||||||| |||| |||| ||||   |||||||| ||||||||||| ||  ||||  ||| | ||| ||| |||||||||||||||||||    
T  14848 aaagtgaatcctaagag-aaaacactaaagga--gtttttgatgcttccaataataaaatctcaccaccaaaggtatttacaaatgtttcccaacccaa 14943  T

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Target: scaffold0076 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 16025 - 15937
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttc 196  Q
    |||||||||||||| ||| ||| ||||| ||||||||||||||| |||||||| ||||||||||||||||||||||   ||||||||||    
T  16025 atccactatgataagagttatacaaagatgttacaagaaattagcttaaaaacccacaaagaacaaaacctaattttcccccatttttc 15937  T

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Target: scaffold0036 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 317
Target Start/End: Original strand, 85743 - 85952
Alignment:
Q  108 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 206  Q
    |||||| ||||| | |||| || |||||| |||||||||||||| |||||| || ||| |||| ||| ||||||||||||||||||||    ||| | ||    
T  85743 atccaccatgatgaaagtgttacaaagag-ttacaagaaattagcttaaaagcttacacaagagcaagacctaatttctacccatttt--gtgtctccca 85839  T
Q  207 cactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccca 302  Q
    | | ||||||||  || |||||||||||| || | |||||| |||||||||||||||||  ||||  |||| ||||||  |||||| | |||||||||||    
T  85840 ctcccacaatatgaattctaagagaaaaacacaaaaggaag-tttttgatccttccaatggtgaaatctcactacccaaagtgtttac-aatgtttccca 85937  T
Q  303 acccaagagaacctc 317  Q
    |||||||||| ||||    
T  85938 acccaagagatcctc 85952  T

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Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000004; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 317
Target Start/End: Original strand, 5774 - 5954
Alignment:
Q  139 tacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaat-at--atcctaagagaaaaat 234  Q
    ||||||||||||| ||| || || ||| |||||||| || |||||||||| ||||||    ||||| ||||||| |||| ||  ||||||||||||||      
T  5774 tacaagaaattagcttataagcttacacaagaacaagacttaatttctactcattttgt--gtcacccacactctcaatgatgaatcctaagagaaaac- 5870  T
Q  235 actataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    || | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||| ||||||||||||| ||||    
T  5871 acaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttgccaacccaagagatcctc 5954  T

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Target: scaffold0006; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 317
Target Start/End: Original strand, 2685 - 2763
Alignment:
Q  240 aggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||||||||||||||||||||||  ||||  |||| ||| || ||||||| | ||||||||||||||||||||| ||||    
T  2685 aggaagctttttgatccttccaatggtgaaatctcactacgcaaggtgtttac-aatgtttcccaacccaagagatcctc 2763  T

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Target: scaffold0006; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 317
Target Start/End: Complemental strand, 133177 - 133107
Alignment:
Q  248 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 317  Q
    ||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  133177 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 133107  T

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Target: scaffold0078 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 232
Target Start/End: Original strand, 23622 - 23715
Alignment:
Q  138 ttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa 232  Q
    ||||||||||||   ||| || |||||||| ||||| | |||||||||||||| |||||| ||||  ||||||||||||  ||||||||||||||    
T  23622 ttacaagaaattttcttagaagctcacaaaaaacaagatctaatttctaccca-ttttcatgtcagacacactcacaatgaatcctaagagaaaa 23715  T

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Target: scaffold1444 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1444
Description:

Target: scaffold1444; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 1258 - 1329
Alignment:
Q  131 aaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtca 202  Q
    |||||||| |||| |||||| |||  || |||||||| |||||| |||||||||||| ||||||| ||||||    
T  1258 aaagaggtaacaaaaaattatatttcaagctcacaaaaaacaaaccctaatttctactcattttttaagtca 1329  T

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Target: scaffold0176 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 232
Target Start/End: Original strand, 17352 - 17446
Alignment:
Q  137 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa 232  Q
    ||||||||||||||| ||| || || ||| |||||||| |||||||||||||| |||||    |||||||||||||  |||  ||||||||||||||    
T  17352 gttacaagaaattagcttataagcttacacaagaacaagacctaatttctacctatttt--gtgtcactcacactcttaatgaatcctaagagaaaa 17446  T

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Target: scaffold0148 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 317
Target Start/End: Original strand, 10924 - 11002
Alignment:
Q  242 gaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 317  Q
    ||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||||  ||||||||||||    
T  10924 gaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 11002  T

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Target: scaffold0129 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 19142 - 19174
Alignment:
Q  283 gtgtttgcaaatgtttcccaacccaagagaacc 315  Q
    |||||| ||||||||||||||||||||||||||    
T  19142 gtgtttacaaatgtttcccaacccaagagaacc 19174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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