View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4282-Insertion-20 (Length: 126)
Name: NF4282-Insertion-20
Description: NF4282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4282-Insertion-20 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 122; Significance: 5e-63; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 122; E-Value: 5e-63
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 5902653 - 5902528
Alignment:
| Q |
1 |
cttaatccattcccttagaaaagggtcagataaatttttagggtatgctatattttgaacttggtgattcattgggtcaattccagtgtataaaatagct |
100 |
Q |
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| T |
5902653 |
cttaatccattcccttagaaaagggtcggataaatttttagggtatgctatattttgaacttggtgattcattgggtcaattccagtgtataaaatagct |
5902554 |
T |
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| Q |
101 |
ggtttgttaccatgaagtattgtggc |
126 |
Q |
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| T |
5902553 |
ggtttgttaccatgaagtattgtggc |
5902528 |
T |
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Target: chr2 (Bit Score: 35; Significance: 0.00000000004; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 123
Target Start/End: Original strand, 42875689 - 42875806
Alignment:
| Q |
6 |
tccattcccttagaaaagggtcagataaatttttagggtatg-ctatattttgaacttggtgattcattgggtcaattccagtgtataaaatagctggtt |
104 |
Q |
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| T |
42875689 |
tccattctctaagtaatgggtcagacatattttt-gggtatggctatgttttgaacttgatgattatttggatcaattcctgtgtataaaattgctggtt |
42875787 |
T |
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| Q |
105 |
tgttaccatgaagtattgt |
123 |
Q |
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| T |
42875788 |
tgccacctggaagtattgt |
42875806 |
T |
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