View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4282-Insertion-37 (Length: 109)
Name: NF4282-Insertion-37
Description: NF4282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4282-Insertion-37 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 100; Significance: 6e-50; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 100; E-Value: 6e-50
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 28091538 - 28091435
Alignment:
| Q |
6 |
tggttaaactgaggggaataagaagtcactaattaaaacatacctttcagcatttgcaataataaaggcctccaaagcccaatttgggtaacacatttta |
105 |
Q |
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| T |
28091538 |
tggttaaactgaggggaataagaagtcactaattaaaacatacctttcagcatttgcaataataaaggcctccaaagcccattttgggtaacacatttta |
28091439 |
T |
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| Q |
106 |
atta |
109 |
Q |
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|||| |
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| T |
28091438 |
atta |
28091435 |
T |
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Target: chr7 (Bit Score: 42; Significance: 0.000000000000002; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 41040488 - 41040533
Alignment:
| Q |
41 |
aaacatacctttcagcatttgcaataataaaggcctccaaagccca |
86 |
Q |
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| T |
41040488 |
aaacatacctttcagcatttgcaatgataaaggcctccaaagccca |
41040533 |
T |
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