View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4282-Insertion-44 (Length: 296)

Name: NF4282-Insertion-44
Description: NF4282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4282-Insertion-44
NF4282-Insertion-44
[»] chr6 (19 HSPs)
chr6 (12-174)||(31974542-31974704)
chr6 (183-295)||(26669998-26670110)
chr6 (181-296)||(9698321-9698436)
chr6 (183-296)||(7273323-7273436)
chr6 (183-296)||(7292746-7292859)
chr6 (183-296)||(26466798-26466911)
chr6 (184-296)||(13743209-13743321)
chr6 (184-296)||(13748709-13748821)
chr6 (186-296)||(24203975-24204085)
chr6 (181-296)||(21279926-21280041)
chr6 (183-296)||(7367548-7367661)
chr6 (186-296)||(30735984-30736094)
chr6 (183-296)||(3213399-3213512)
chr6 (179-296)||(21293665-21293782)
chr6 (184-289)||(30014343-30014448)
chr6 (183-283)||(33242402-33242502)
chr6 (186-283)||(27441544-27441641)
chr6 (184-283)||(33253913-33254012)
chr6 (181-283)||(31109223-31109325)
[»] chr1 (26 HSPs)
chr1 (184-296)||(43571074-43571186)
chr1 (183-296)||(5489775-5489888)
chr1 (183-296)||(48498950-48499063)
chr1 (181-296)||(4401324-4401440)
chr1 (183-296)||(24769487-24769600)
chr1 (184-296)||(37814778-37814890)
chr1 (181-296)||(750293-750408)
chr1 (186-296)||(7447828-7447937)
chr1 (183-296)||(23989511-23989625)
chr1 (184-296)||(50448248-50448360)
chr1 (186-296)||(2497550-2497660)
chr1 (183-283)||(44112676-44112776)
chr1 (184-283)||(38335918-38336017)
chr1 (184-283)||(48119628-48119727)
chr1 (184-283)||(35003294-35003393)
chr1 (226-295)||(4888085-4888154)
chr1 (182-283)||(41065151-41065252)
chr1 (181-283)||(45427746-45427848)
chr1 (182-277)||(38113202-38113297)
chr1 (184-283)||(46168383-46168482)
chr1 (183-283)||(45639733-45639833)
chr1 (182-283)||(45705823-45705924)
chr1 (184-283)||(35000114-35000213)
chr1 (183-283)||(26585461-26585561)
chr1 (183-241)||(14427346-14427404)
chr1 (184-236)||(51898601-51898653)
[»] chr3 (27 HSPs)
chr3 (183-296)||(46941052-46941165)
chr3 (184-295)||(42100688-42100799)
chr3 (183-296)||(40808864-40808977)
chr3 (181-296)||(25413678-25413793)
chr3 (185-296)||(54237097-54237208)
chr3 (183-296)||(47191014-47191126)
chr3 (183-296)||(54246136-54246249)
chr3 (185-296)||(42394407-42394518)
chr3 (183-296)||(24688390-24688503)
chr3 (184-296)||(45126916-45127028)
chr3 (184-295)||(36150130-36150241)
chr3 (185-293)||(40480750-40480858)
chr3 (181-296)||(53581846-53581961)
chr3 (186-296)||(27748565-27748675)
chr3 (183-296)||(53273672-53273785)
chr3 (183-283)||(4190266-4190366)
chr3 (183-283)||(9434123-9434223)
chr3 (182-272)||(25996266-25996356)
chr3 (183-283)||(10457893-10457993)
chr3 (186-269)||(1078229-1078311)
chr3 (183-286)||(29558232-29558335)
chr3 (199-296)||(51249323-51249420)
chr3 (226-289)||(52629870-52629933)
chr3 (184-283)||(34791829-34791928)
chr3 (183-296)||(11064710-11064821)
chr3 (183-283)||(52627978-52628078)
chr3 (184-283)||(51757593-51757692)
[»] scaffold0119 (1 HSPs)
scaffold0119 (183-295)||(684-796)
[»] chr8 (31 HSPs)
chr8 (186-296)||(42295197-42295307)
chr8 (183-296)||(36743471-36743584)
chr8 (184-296)||(11582766-11582878)
chr8 (184-292)||(29705362-29705470)
chr8 (182-296)||(42197423-42197537)
chr8 (183-296)||(30660730-30660843)
chr8 (180-296)||(2546992-2547108)
chr8 (183-296)||(5754902-5755015)
chr8 (184-296)||(2165951-2166063)
chr8 (180-296)||(29800938-29801054)
chr8 (185-296)||(45397317-45397428)
chr8 (186-296)||(30912550-30912660)
chr8 (180-296)||(31384660-31384776)
chr8 (186-296)||(26125637-26125747)
chr8 (180-296)||(20148756-20148872)
chr8 (184-295)||(1375542-1375653)
chr8 (186-280)||(42699259-42699353)
chr8 (183-283)||(35181515-35181615)
chr8 (183-283)||(34304787-34304887)
chr8 (181-296)||(40528622-40528738)
chr8 (182-283)||(18066719-18066820)
chr8 (226-296)||(9241594-9241664)
chr8 (186-283)||(33629994-33630091)
chr8 (181-277)||(16603633-16603729)
chr8 (186-289)||(3743773-3743876)
chr8 (185-278)||(16358839-16358933)
chr8 (184-221)||(28977146-28977183)
chr8 (226-283)||(10678153-10678210)
chr8 (183-219)||(19386635-19386671)
chr8 (238-286)||(32328815-32328863)
chr8 (184-236)||(37038609-37038661)
[»] chr2 (30 HSPs)
chr2 (182-296)||(30838630-30838744)
chr2 (184-296)||(1750414-1750526)
chr2 (185-296)||(19047158-19047269)
chr2 (183-296)||(12302241-12302354)
chr2 (183-296)||(43335751-43335864)
chr2 (184-296)||(16096747-16096859)
chr2 (180-296)||(43490389-43490505)
chr2 (183-296)||(4764714-4764827)
chr2 (185-291)||(34817769-34817875)
chr2 (186-278)||(33229303-33229396)
chr2 (184-296)||(13780723-13780835)
chr2 (183-283)||(43114556-43114656)
chr2 (184-283)||(12415461-12415560)
chr2 (184-283)||(12427521-12427620)
chr2 (184-296)||(42849847-42849946)
chr2 (186-283)||(11825655-11825752)
chr2 (186-283)||(41281975-41282072)
chr2 (183-283)||(16803967-16804067)
chr2 (183-283)||(16843249-16843349)
chr2 (179-294)||(8896573-8896688)
chr2 (180-296)||(42026763-42026881)
chr2 (181-277)||(18491702-18491798)
chr2 (222-296)||(39149280-39149354)
chr2 (183-283)||(966835-966935)
chr2 (183-283)||(34895742-34895842)
chr2 (186-269)||(6518484-6518566)
chr2 (186-269)||(4299435-4299518)
chr2 (186-273)||(7070418-7070505)
chr2 (222-283)||(4451951-4452012)
chr2 (182-266)||(14285674-14285758)
[»] chr7 (29 HSPs)
chr7 (184-296)||(24001000-24001112)
chr7 (182-294)||(35069719-35069831)
chr7 (184-296)||(42538419-42538531)
chr7 (183-296)||(5015394-5015507)
chr7 (184-296)||(5810912-5811024)
chr7 (184-296)||(42972852-42972964)
chr7 (186-296)||(43343612-43343722)
chr7 (186-296)||(44416922-44417032)
chr7 (180-296)||(44326174-44326290)
chr7 (181-296)||(9216299-9216413)
chr7 (186-296)||(4638187-4638297)
chr7 (186-296)||(10573751-10573861)
chr7 (187-296)||(26898390-26898499)
chr7 (184-296)||(45326020-45326132)
chr7 (181-296)||(16180345-16180459)
chr7 (193-296)||(32029805-32029908)
chr7 (182-296)||(5194219-5194333)
chr7 (183-296)||(41861673-41861788)
chr7 (180-296)||(43317439-43317555)
chr7 (200-296)||(27393248-27393344)
chr7 (181-296)||(24280584-24280699)
chr7 (179-296)||(38160567-38160699)
chr7 (183-272)||(40236918-40237007)
chr7 (184-283)||(31513287-31513386)
chr7 (185-283)||(31408634-31408732)
chr7 (183-283)||(27535232-27535332)
chr7 (183-283)||(33384869-33384970)
chr7 (184-251)||(39998408-39998475)
chr7 (182-237)||(47279744-47279799)
[»] chr5 (14 HSPs)
chr5 (184-296)||(2614637-2614749)
chr5 (184-296)||(22512305-22512417)
chr5 (184-296)||(41334651-41334763)
chr5 (183-296)||(18033981-18034094)
chr5 (183-296)||(7617132-7617245)
chr5 (183-296)||(33801468-33801581)
chr5 (186-296)||(5256997-5257107)
chr5 (183-296)||(38470578-38470691)
chr5 (184-283)||(32473395-32473494)
chr5 (184-259)||(33855068-33855143)
chr5 (181-296)||(39122421-39122535)
chr5 (180-283)||(17208070-17208173)
chr5 (186-266)||(25915006-25915085)
chr5 (183-283)||(30622720-30622819)
[»] chr4 (43 HSPs)
chr4 (183-292)||(33703140-33703249)
chr4 (184-296)||(35017733-35017844)
chr4 (183-296)||(1771254-1771367)
chr4 (186-296)||(39631102-39631213)
chr4 (186-292)||(43949793-43949900)
chr4 (183-296)||(25051692-25051805)
chr4 (183-296)||(28982810-28982923)
chr4 (184-296)||(27550309-27550421)
chr4 (186-296)||(43514674-43514784)
chr4 (184-289)||(27316708-27316813)
chr4 (183-296)||(27864563-27864676)
chr4 (183-296)||(55966334-55966447)
chr4 (184-294)||(12496956-12497066)
chr4 (186-296)||(27893830-27893940)
chr4 (183-296)||(23035979-23036092)
chr4 (183-296)||(28988472-28988585)
chr4 (182-296)||(48463438-48463552)
chr4 (187-296)||(23204766-23204875)
chr4 (185-296)||(41878407-41878518)
chr4 (186-296)||(43735744-43735854)
chr4 (186-296)||(31680904-31681014)
chr4 (184-296)||(41847971-41848083)
chr4 (184-291)||(45490306-45490413)
chr4 (184-283)||(17619153-17619252)
chr4 (182-291)||(21687004-21687113)
chr4 (183-283)||(711959-712059)
chr4 (184-283)||(55272377-55272476)
chr4 (226-296)||(51512253-51512323)
chr4 (186-296)||(41327531-41327641)
chr4 (181-283)||(48435580-48435682)
chr4 (182-283)||(32728355-32728456)
chr4 (186-278)||(3756252-3756344)
chr4 (181-296)||(46412457-46412562)
chr4 (186-272)||(35037007-35037093)
chr4 (183-264)||(960890-960971)
chr4 (183-269)||(46827721-46827807)
chr4 (182-264)||(49229684-49229766)
chr4 (222-283)||(19879992-19880053)
chr4 (186-283)||(38851515-38851612)
chr4 (180-235)||(30189269-30189324)
chr4 (181-236)||(50526086-50526141)
chr4 (238-296)||(56215886-56215943)
chr4 (226-283)||(36004117-36004174)
[»] scaffold0187 (2 HSPs)
scaffold0187 (181-296)||(14176-14291)
scaffold0187 (181-296)||(24504-24619)
[»] scaffold0038 (1 HSPs)
scaffold0038 (185-296)||(112656-112767)
[»] scaffold0385 (1 HSPs)
scaffold0385 (183-288)||(11250-11355)
[»] scaffold0157 (1 HSPs)
scaffold0157 (184-294)||(23411-23521)
[»] scaffold0003 (1 HSPs)
scaffold0003 (186-283)||(45720-45817)
[»] scaffold0100 (1 HSPs)
scaffold0100 (184-283)||(35457-35556)


Alignment Details
Target: chr6 (Bit Score: 131; Significance: 5e-68; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 12 - 174
Target Start/End: Original strand, 31974542 - 31974704
Alignment:
Q  12 gaggtatatttatagcctagaaccatagaaaatacctgcaatgcaacctaaagagtgagattcgttgttcctgaaaatacattcaaaagcagttataggt 111  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||||    
T  31974542 gaggaatatttatagcctagaaccatagaaaatacctgcaatgcaacctaaagagtgagattcattgttcctaaaaatacatgcaaaagtagttataggt 31974641  T
Q  112 ggagtaccagatgcgacaccatctatattacacttaatccaattcaacataggggttgtcaaa 174  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31974642 ggagtacaaggtgcgacaccatctatattacacttaatccaattcaacataggagttgtcaaa 31974704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 183 - 295
Target Start/End: Complemental strand, 26670110 - 26669998
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26670110 aggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatct 26670011  T
Q  283 tctatttgtgtgg 295  Q
    |||||||||||||    
T  26670010 tctatttgtgtgg 26669998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 9698436 - 9698321
Alignment:
Q  181 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 280  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9698436 ataggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 9698337  T
Q  281 cttctatttgtgtggg 296  Q
    ||||||||||||||||    
T  9698336 cttctatttgtgtggg 9698321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 7273436 - 7273323
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  7273436 aggaaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcacaatcacactttatct 7273337  T
Q  283 tctatttgtgtggg 296  Q
    ||||||| ||||||    
T  7273336 tctatttatgtggg 7273323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 7292746 - 7292859
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||||||||||||| ||||||| ||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7292746 aggaaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatct 7292845  T
Q  283 tctatttgtgtggg 296  Q
    ||||||||||||||    
T  7292846 tctatttgtgtggg 7292859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 26466798 - 26466911
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26466798 aggaaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcacaaccacactttatct 26466897  T
Q  283 tctatttgtgtggg 296  Q
    ||||||||| ||||    
T  26466898 tctatttgtttggg 26466911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 184 - 296
Target Start/End: Complemental strand, 13743321 - 13743209
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||||||||||||| ||||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13743321 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 13743222  T
Q  284 ctatttgtgtggg 296  Q
    |||||||||||||    
T  13743221 ctatttgtgtggg 13743209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 184 - 296
Target Start/End: Complemental strand, 13748821 - 13748709
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||||||||||||| ||||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13748821 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 13748722  T
Q  284 ctatttgtgtggg 296  Q
    |||||||||||||    
T  13748721 ctatttgtgtggg 13748709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 24204085 - 24203975
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 285  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24204085 aaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatattct 24203986  T
Q  286 atttgtgtggg 296  Q
    |||||||||||    
T  24203985 atttgtgtggg 24203975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 21279926 - 21280041
Alignment:
Q  181 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 280  Q
    ||||||||||||||||||||||||||||||| |||||   ||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21279926 ataggaaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaaattcatctcacaaccacactttat 21280025  T
Q  281 cttctatttgtgtggg 296  Q
    ||||||||||||||||    
T  21280026 cttctatttgtgtggg 21280041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 7367548 - 7367661
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||||||||||| ||||||| | ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  7367548 aggaaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccacactttattt 7367647  T
Q  283 tctatttgtgtggg 296  Q
    ||||||| ||||||    
T  7367648 tctatttatgtggg 7367661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 30735984 - 30736094
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 285  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  30735984 aaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatctcacaatcacactttatcttct 30736083  T
Q  286 atttgtgtggg 296  Q
    |||| ||||||    
T  30736084 atttatgtggg 30736094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 3213399 - 3213512
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||| ||||| ||||||||| |||||||||    
T  3213399 aggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccatactttatct 3213498  T
Q  283 tctatttgtgtggg 296  Q
    ||||||| ||||||    
T  3213499 tctatttatgtggg 3213512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 179 - 296
Target Start/End: Complemental strand, 21293782 - 21293665
Alignment:
Q  179 taataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttt 278  Q
    ||||||||||||||||||| |||||||||||||| ||||  ||| |||||||||||||||||| |||||||||||||| ||||| |||||||||||||||    
T  21293782 taataggaaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacacttt 21293683  T
Q  279 atcttctatttgtgtggg 296  Q
    ||||||||||| ||||||    
T  21293682 atcttctatttatgtggg 21293665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 184 - 289
Target Start/End: Original strand, 30014343 - 30014448
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||||||||||||| | |||| |||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  30014343 ggaaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctcacaaccatactttatctt 30014442  T
Q  284 ctattt 289  Q
    ||||||    
T  30014443 ctattt 30014448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 33242402 - 33242502
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||||||||||||||||||||| |||| || ||||||| |||||||||||||||||||| ||| |||||||||| |||||||||||| || ||||| |||    
T  33242402 aggaaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatctcacaaacatactttctct 33242501  T
Q  283 t 283  Q
    |    
T  33242502 t 33242502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 283
Target Start/End: Original strand, 27441544 - 27441641
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||| || ||||||  |||||||| || |||||||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  27441544 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctt 27441641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 184 - 283
Target Start/End: Original strand, 33253913 - 33254012
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||||||||||||| |||| ||  |||||  ||||||||||||||| |||||||| || ||||||| |||||||||||| || ||||||||||    
T  33253913 ggaaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctt 33254012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 283
Target Start/End: Complemental strand, 31109325 - 31109223
Alignment:
Q  181 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 280  Q
    ||||||||||||||||||||||||||||| || |||| | |||| ||||||||||| | ||||||||||||| ||| |||| || || |||||| ||| |    
T  31109325 ataggaaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatattttgataaattcaacttacgaccacattttct 31109226  T
Q  281 ctt 283  Q
    |||    
T  31109225 ctt 31109223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 3e-57; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 184 - 296
Target Start/End: Complemental strand, 43571186 - 43571074
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43571186 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 43571087  T
Q  284 ctatttgtgtggg 296  Q
    |||||||||||||    
T  43571086 ctatttgtgtggg 43571074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 5489775 - 5489888
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5489775 aggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatct 5489874  T
Q  283 tctatttgtgtggg 296  Q
    ||||||||||||||    
T  5489875 tctatttgtgtggg 5489888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 48499063 - 48498950
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||| ||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48499063 aggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatct 48498964  T
Q  283 tctatttgtgtggg 296  Q
    ||||||||||||||    
T  48498963 tctatttgtgtggg 48498950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 4401324 - 4401440
Alignment:
Q  181 ataggaaaatgttacatgaacacccttt-attcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttta 279  Q
    |||| |||||| ||||||||||| |||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4401324 atagaaaaatgatacatgaacactcttttattcctacacttcattgtacaccccatgtattagagatattttggtaagttcatctcacaaccacacttta 4401423  T
Q  280 tcttctatttgtgtggg 296  Q
    |||||||||||||||||    
T  4401424 tcttctatttgtgtggg 4401440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 24769600 - 24769487
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||| |||||||||| |||||| ||||||  |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  24769600 aggaaaatgtttcatgaacaccttttatttctacactccattgtacaccccatgtattagggatattttggtaagttcttatcacaaccacactttatct 24769501  T
Q  283 tctatttgtgtggg 296  Q
    ||||||||||||||    
T  24769500 tctatttgtgtggg 24769487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 37814778 - 37814890
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||    
T  37814778 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatctt 37814877  T
Q  284 ctatttgtgtggg 296  Q
    |||||| ||||||    
T  37814878 ctatttatgtggg 37814890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 750408 - 750293
Alignment:
Q  181 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 280  Q
    ||||||||||||||| |||||||||||  |||||||||| ||||||||||||||||||| |||||||||||| ||| ||||||||| |||||||||||||    
T  750408 ataggaaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttgataaattcatctcaaaaccacactttat 750309  T
Q  281 cttctatttgtgtggg 296  Q
    ||||||||||||||||    
T  750308 cttctatttgtgtggg 750293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 7447828 - 7447937
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 285  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||| ||||||||  ||||||||| ||||||||||||||||||||||||||||||||    
T  7447828 aaaatgttacatgaacatcctttattcctacatcccattgtacaccc-atgtattacagatattttgataagttcatctcacaaccacactttatcttct 7447926  T
Q  286 atttgtgtggg 296  Q
    |||||||||||    
T  7447927 atttgtgtggg 7447937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 23989625 - 23989511
Alignment:
Q  183 aggaaaatgttacatgaacacccttt-attcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 281  Q
    |||||||||||||||||||||||||| |||| |||||   |||||| |||| ||||||||||||||||||||||| || |||||||||||||||||||||    
T  23989625 aggaaaatgttacatgaacacccttttattcatacactcaattgtataccctatgtattagggatattttggtaaatttatctcacaaccacactttatc 23989526  T
Q  282 ttctatttgtgtggg 296  Q
    |||||||||||||||    
T  23989525 ttctatttgtgtggg 23989511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 184 - 296
Target Start/End: Complemental strand, 50448360 - 50448248
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||| ||||||| ||||||  |||||||||||  |||||||||||||||||| |||||||||||| ||||||||| ||||||||    
T  50448360 ggaaaatgttacatgaacactctttatttctacactccattgtacaccttatgtattagggatatttttgtaagttcatcttacaaccacattttatctt 50448261  T
Q  284 ctatttgtgtggg 296  Q
    |||||| ||||||    
T  50448260 ctatttttgtggg 50448248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 2497660 - 2497550
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 285  Q
    |||||||||||| |||||| ||||||| ||||   ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  2497660 aaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctcacaaccacactttatcatct 2497561  T
Q  286 atttgtgtggg 296  Q
    |||| ||||||    
T  2497560 atttatgtggg 2497550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 44112676 - 44112776
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||| || ||||||  ||||||||||||||| |||||||| |||||||||| ||||||||||||||| ||||| |||    
T  44112676 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctct 44112775  T
Q  283 t 283  Q
    |    
T  44112776 t 44112776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 184 - 283
Target Start/End: Original strand, 38335918 - 38336017
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||||| || ||||||| |||||||| |||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  38335918 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 38336017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 184 - 283
Target Start/End: Original strand, 48119628 - 48119727
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||||| || ||||||  ||||||||||||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  48119628 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 48119727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 184 - 283
Target Start/End: Original strand, 35003294 - 35003393
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||||| || ||||||  ||||||||||||||  |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  35003294 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatctcacaaccatactttctctt 35003393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 226 - 295
Target Start/End: Original strand, 4888085 - 4888154
Alignment:
Q  226 tacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtgg 295  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  4888085 tacatcccatgtattagggatattttggtaagtttatctcacaaccacactttattttctatttgtgtgg 4888154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 283
Target Start/End: Original strand, 41065151 - 41065252
Alignment:
Q  182 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 281  Q
    |||||||||||||||||||||||||||| || ||||||   |||||||||||||| |||||||  |||||||||| ||||||||||||||| ||||| ||    
T  41065151 taggaaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatctcacaaccatactttctc 41065250  T
Q  282 tt 283  Q
    ||    
T  41065251 tt 41065252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 283
Target Start/End: Complemental strand, 45427848 - 45427746
Alignment:
Q  181 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 280  Q
    |||||||||||||||||||| ||| |||| || ||||||  ||||||||| ||||| |||||||| |||||||||| ||||||||||||||| ||||| |    
T  45427848 ataggaaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatctcacaaccatactttct 45427749  T
Q  281 ctt 283  Q
    |||    
T  45427748 ctt 45427746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 38113297 - 38113202
Alignment:
Q  182 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactt 277  Q
    ||||||||||||| |||||||||||||| || ||||||  ||||||||||||||| ||||  || |||||||||| ||||||||||||||| ||||    
T  38113297 taggaaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatctcacaaccatactt 38113202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 184 - 283
Target Start/End: Original strand, 46168383 - 46168482
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||||| || || | |  ||||||||||| ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  46168383 ggaaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 46168482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 45639833 - 45639733
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||| ||||| || |||| |  ||||||||||||||  |||| |||||||||||||| |||||||||||| || ||||| |||    
T  45639833 aggaaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatctcacaatcatactttctct 45639734  T
Q  283 t 283  Q
    |    
T  45639733 t 45639733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 283
Target Start/End: Original strand, 45705823 - 45705924
Alignment:
Q  182 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 281  Q
    ||||||||||||| |||||||||||||| || ||||    ||||||||| ||||| |||| ||| |||||| ||| ||||||||||||||| ||||| ||    
T  45705823 taggaaaatgttatatgaacaccctttaatcatacattctattgtacactccatgcattatggacattttgataaattcatctcacaaccatactttctc 45705922  T
Q  282 tt 283  Q
    ||    
T  45705923 tt 45705924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 283
Target Start/End: Complemental strand, 35000213 - 35000114
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||||||||||||| |||| || |||||   |||||| ||  ||||||||||||| |||||| ||| || |||||||||||| ||||| ||||    
T  35000213 ggaaaatgttacatgaacaccttttaatcatacactctattgtatacttcatgtattagggacattttgataaatttatctcacaaccatactttctctt 35000114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 26585461 - 26585561
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||||||||||| |||||||  ||||| || |||||   ||||||||||||||| |||| ||||||||| |||| |||||||| ||| || ||||| |||    
T  26585461 aggaaaatgttagatgaacattctttaatcatacactatattgtacaccccatgcattaaggatattttagtaaattcatctcgcaatcatactttctct 26585560  T
Q  283 t 283  Q
    |    
T  26585561 t 26585561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 14427346 - 14427404
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtatta 241  Q
    ||||||||||||||||||||||||||| || ||||||  |||||||||| |||| ||||    
T  14427346 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcatta 14427404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 51898601 - 51898653
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatg 236  Q
    |||||||||||||| ||||||||||||| ||| ||  | ||||||||||||||    
T  51898601 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatg 51898653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 2e-55; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 46941052 - 46941165
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46941052 aggaaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 46941151  T
Q  283 tctatttgtgtggg 296  Q
    ||||||||||||||    
T  46941152 tctatttgtgtggg 46941165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 184 - 295
Target Start/End: Original strand, 42100688 - 42100799
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42100688 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacattttatctt 42100787  T
Q  284 ctatttgtgtgg 295  Q
     |||||||||||    
T  42100788 ttatttgtgtgg 42100799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 40808864 - 40808977
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40808864 aggaaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 40808963  T
Q  283 tctatttgtgtggg 296  Q
    ||||||||||||||    
T  40808964 tctatttgtgtggg 40808977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 25413678 - 25413793
Alignment:
Q  181 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 280  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  25413678 ataggaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcacaaccacactttat 25413777  T
Q  281 cttctatttgtgtggg 296  Q
    ||||||||||||||||    
T  25413778 cttctatttgtgtggg 25413793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 185 - 296
Target Start/End: Original strand, 54237097 - 54237208
Alignment:
Q  185 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 284  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54237097 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 54237196  T
Q  285 tatttgtgtggg 296  Q
    ||||||||||||    
T  54237197 tatttgtgtggg 54237208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 47191126 - 47191014
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  47191126 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccc-atgtattagagatattttgataagttcatctcacaaccacactttatct 47191028  T
Q  283 tctatttgtgtggg 296  Q
    ||||||||||||||    
T  47191027 tctatttgtgtggg 47191014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 54246249 - 54246136
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  54246249 aggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctcacaaccacactttatct 54246150  T
Q  283 tctatttgtgtggg 296  Q
    ||||||||||||||    
T  54246149 tctatttgtgtggg 54246136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 185 - 296
Target Start/End: Complemental strand, 42394518 - 42394407
Alignment:
Q  185 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 284  Q
    |||||||||||||||||||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42394518 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 42394419  T
Q  285 tatttgtgtggg 296  Q
    ||||||||||||    
T  42394418 tatttgtgtggg 42394407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 24688503 - 24688390
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24688503 aggaaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatct 24688404  T
Q  283 tctatttgtgtggg 296  Q
    ||||||| ||||||    
T  24688403 tctatttatgtggg 24688390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 184 - 296
Target Start/End: Complemental strand, 45127028 - 45126916
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||| |||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  45127028 ggaaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatttt 45126929  T
Q  284 ctatttgtgtggg 296  Q
    |||||| ||||||    
T  45126928 ctatttatgtggg 45126916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 184 - 295
Target Start/End: Original strand, 36150130 - 36150241
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||||||||| ||||||||||| |||||| |||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36150130 ggaaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatctcacaaccacactttatctt 36150229  T
Q  284 ctatttgtgtgg 295  Q
    ||||||||||||    
T  36150230 ctatttgtgtgg 36150241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 185 - 293
Target Start/End: Original strand, 40480750 - 40480858
Alignment:
Q  185 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 284  Q
    |||||||||||||||||||||||||||| ||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40480750 gaaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 40480849  T
Q  285 tatttgtgt 293  Q
    |||||||||    
T  40480850 tatttgtgt 40480858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 53581961 - 53581846
Alignment:
Q  181 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 280  Q
    |||| |||||||||||||||||| |||||||| |||||  ||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||    
T  53581961 atagaaaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctcacaaccacactttat 53581862  T
Q  281 cttctatttgtgtggg 296  Q
    ||||||||||||||||    
T  53581861 cttctatttgtgtggg 53581846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 27748565 - 27748675
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 285  Q
    ||||||||||||||||||| ||||||| ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  27748565 aaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatctcacaacaatactttatcttct 27748664  T
Q  286 atttgtgtggg 296  Q
    |||||||||||    
T  27748665 atttgtgtggg 27748675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 53273785 - 53273672
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||||||||||| ||||||| | |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  53273785 aggaaaatgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatactttatct 53273686  T
Q  283 tctatttgtgtggg 296  Q
    | ||||| ||||||    
T  53273685 tttatttatgtggg 53273672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 4190366 - 4190266
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||| || ||||||  ||||||||||  ||||||||| ||||||||||||| ||||||||||||||| ||||| |||    
T  4190366 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatctcacaaccatactttctct 4190267  T
Q  283 t 283  Q
    |    
T  4190266 t 4190266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 9434123 - 9434223
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||| || |||||   ||||||||||||||| |||||||| |||||||||| ||||||||||||||| ||||| |||    
T  9434123 aggaaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctct 9434222  T
Q  283 t 283  Q
    |    
T  9434223 t 9434223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 25996266 - 25996356
Alignment:
Q  182 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 272  Q
    |||||||||||||||||||||||||||| || |||| || |||||||||||||| ||||| ||| |||||||||| |||||||||||||||    
T  25996266 taggaaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatctcacaacca 25996356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 10457993 - 10457893
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||||||||||||||||||||| |||| || ||||||  ||||||||||||||| |||| |||||||||||||| || |||||||||||| ||||| |||    
T  10457993 aggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatctcacaaccatactttctct 10457894  T
Q  283 t 283  Q
    |    
T  10457893 t 10457893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 1078229 - 1078311
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaa 269  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||  |||||||| ||||||||| ||| |||||||||||||    
T  1078229 aaaatgttacatgaacaccctttattcctgcacctcattgtacacctaatgtatta-ggatatttttgtaggttcatctcacaa 1078311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 29558335 - 29558232
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||| ||||||| ||||||||||||||||| |||| |||||||||||||| || ||||||| |||| ||||||| |||||||||||| |||| ||||| |    
T  29558335 aggacaatgttatatgaacaccctttattcatacatctcattgtacaccctatatattaggaatatattggtaaattcatctcacaatcacattttattt 29558236  T
Q  283 tcta 286  Q
    ||||    
T  29558235 tcta 29558232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 199 - 296
Target Start/End: Original strand, 51249323 - 51249420
Alignment:
Q  199 aacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggg 296  Q
    ||||||||||||||   || | |||| |||||| |||| |||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  51249323 aacaccctttattcacccaacccattatacacctcatgcattaaggatattttggtaaattcatctcacaaccacactttctcttctatttgtgtggg 51249420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 52629870 - 52629933
Alignment:
Q  226 tacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctattt 289  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  52629870 tacaccctatgtattaaggatatttttgtaagttcatctcacaaccacactttatcttctattt 52629933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 283
Target Start/End: Original strand, 34791829 - 34791928
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||||| || ||||||  |||||| ||| |||| |||||||| |||||  ||| ||||||||||||||| ||||| ||||    
T  34791829 ggaaaatgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattttaataatttcatctcacaaccatactttctctt 34791928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 11064821 - 11064710
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||  |||||| | ||||||| ||||||||||||||||||| |||  |||| ||||||||| | | ||||||||| || |||||||  |||    
T  11064821 aggaaaatgtta--tgaacatcatttattcatacacctcattgtacaccctatgctttagagatattttgattaattcatctcataatcacacttactct 11064724  T
Q  283 tctatttgtgtggg 296  Q
    ||||||||||||||    
T  11064723 tctatttgtgtggg 11064710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 52628078 - 52627978
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||| ||||||||||||| || |||| |  |||||||||| |||| |||| | |||||||||||| |||||||||||| || ||||| |||    
T  52628078 aggaaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatctcacaatcatactttctct 52627979  T
Q  283 t 283  Q
    |    
T  52627978 t 52627978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 283
Target Start/End: Original strand, 51757593 - 51757692
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||| |||||| ||||||||||| || ||||||  |||||||||| |||| |||| ||| ||||| |||| ||||||||||||||| ||||| ||||    
T  51757593 ggaaaatattacataaacaccctttaatcatacaccctattgtacacctcatgcattatggacattttagtaatttcatctcacaaccatactttctctt 51757692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 183 - 295
Target Start/End: Original strand, 684 - 796
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  684 aggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatct 783  T
Q  283 tctatttgtgtgg 295  Q
    |||||||||||||    
T  784 tctatttgtgtgg 796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 3e-51; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 42295197 - 42295307
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42295197 aaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 42295296  T
Q  286 atttgtgtggg 296  Q
    |||| ||||||    
T  42295297 atttatgtggg 42295307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 36743584 - 36743471
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36743584 aggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatct 36743485  T
Q  283 tctatttgtgtggg 296  Q
    ||||||||||||||    
T  36743484 tctatttgtgtggg 36743471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 11582766 - 11582878
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11582766 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 11582865  T
Q  284 ctatttgtgtggg 296  Q
    |||||||||||||    
T  11582866 ctatttgtgtggg 11582878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 292
Target Start/End: Original strand, 29705362 - 29705470
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29705362 ggaaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatctt 29705461  T
Q  284 ctatttgtg 292  Q
    |||||||||    
T  29705462 ctatttgtg 29705470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 182 - 296
Target Start/End: Complemental strand, 42197537 - 42197423
Alignment:
Q  182 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 281  Q
    ||||||||||||||||||||||| |||||||||||||| ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42197537 taggaaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctcacaaccacactttatc 42197438  T
Q  282 ttctatttgtgtggg 296  Q
    |||||||||||||||    
T  42197437 ttctatttgtgtggg 42197423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 30660843 - 30660730
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30660843 aggaaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagttcatcttacaaccacactttatct 30660744  T
Q  283 tctatttgtgtggg 296  Q
    ||||||||||||||    
T  30660743 tctatttgtgtggg 30660730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 180 - 296
Target Start/End: Original strand, 2546992 - 2547108
Alignment:
Q  180 aataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttta 279  Q
    |||||||||||||||||||||||| ||||||| ||||||  ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  2546992 aataggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagttcatctcacaaccacacttta 2547091  T
Q  280 tcttctatttgtgtggg 296  Q
    |||||||||||||||||    
T  2547092 tcttctatttgtgtggg 2547108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 5754902 - 5755015
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||||||||||||||||||||| |||||||||||| | ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5754902 aggaaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatctcacaaccacactttatct 5755001  T
Q  283 tctatttgtgtggg 296  Q
    ||||||| ||||||    
T  5755002 tctatttatgtggg 5755015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 184 - 296
Target Start/End: Complemental strand, 2166063 - 2165951
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  2166063 ggaaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagttcatctcataaccacactttatctt 2165964  T
Q  284 ctatttgtgtggg 296  Q
    |||||||||||||    
T  2165963 ctatttgtgtggg 2165951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 180 - 296
Target Start/End: Complemental strand, 29801054 - 29800938
Alignment:
Q  180 aataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttta 279  Q
    ||||| |||||||||||| |||||| ||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29801054 aatagaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttta 29800955  T
Q  280 tcttctatttgtgtggg 296  Q
    |||||||||| ||||||    
T  29800954 tcttctatttatgtggg 29800938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 185 - 296
Target Start/End: Original strand, 45397317 - 45397428
Alignment:
Q  185 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 284  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  45397317 gaaaatgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatatttttgtaagttcatctcacaaccacaatttatcttc 45397416  T
Q  285 tatttgtgtggg 296  Q
    ||||||||||||    
T  45397417 tatttgtgtggg 45397428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 30912660 - 30912550
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 285  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||| |||||||||||||||||||||||||| ||| |||||||||    
T  30912660 aaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctcacaaccgcaccttatcttct 30912561  T
Q  286 atttgtgtggg 296  Q
    |||||||||||    
T  30912560 atttgtgtggg 30912550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 180 - 296
Target Start/End: Original strand, 31384660 - 31384776
Alignment:
Q  180 aataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttta 279  Q
    ||||||||| | ||||||||||||||||||||| ||||    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31384660 aataggaaagtattacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatctcacaaccacacttta 31384759  T
Q  280 tcttctatttgtgtggg 296  Q
    |||||||||||||||||    
T  31384760 tcttctatttgtgtggg 31384776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 26125637 - 26125747
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 285  Q
    |||||||||||| |||||||||||||| ||||   |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26125637 aaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 26125736  T
Q  286 atttgtgtggg 296  Q
    |||| ||||||    
T  26125737 atttatgtggg 26125747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 180 - 296
Target Start/End: Original strand, 20148756 - 20148872
Alignment:
Q  180 aataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttta 279  Q
    ||||| |||||||||||| |||||||||||||| |||| | ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  20148756 aatagaaaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaaccacacttta 20148855  T
Q  280 tcttctatttgtgtggg 296  Q
    || ||||||| ||||||    
T  20148856 tcatctatttatgtggg 20148872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 184 - 295
Target Start/End: Original strand, 1375542 - 1375653
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||| ||||||||||||| ||||||| ||||||  |||||||||||||| |||||||||||||||||||| || |||||||||| ||||||||||||    
T  1375542 ggaaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaaatttatctcacaactacactttatctt 1375641  T
Q  284 ctatttgtgtgg 295  Q
    ||||||||||||    
T  1375642 ctatttgtgtgg 1375653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 186 - 280
Target Start/End: Original strand, 42699259 - 42699353
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 280  Q
    |||||||||||||||||||||||||||||||||| |||||||||||  |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  42699259 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatctcacaaccacactttat 42699353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 35181515 - 35181615
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||| || ||||||  ||||||||||||||| |||||||| |||||||||| ||||||||||||||| ||||| |||    
T  35181515 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctct 35181614  T
Q  283 t 283  Q
    |    
T  35181615 t 35181615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 34304787 - 34304887
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||||||||||||||||||| |||||| || ||||||  ||||||||||||||| |||||||| |||||||||| ||||||||||||||| ||||| |||    
T  34304787 aggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctct 34304886  T
Q  283 t 283  Q
    |    
T  34304887 t 34304887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 40528738 - 40528622
Alignment:
Q  181 ataggaaaatgttacatgaacacccttt-attcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttta 279  Q
    ||||||||||  |||||||||||||||| ||||  | ||| ||||||||||||||| ||||||||| |||||| ||| || ||||||||||||||||||     
T  40528738 ataggaaaataatacatgaacacccttttattcacaaaccccattgtacaccccatatattagggacattttgataaatttatctcacaaccacactttc 40528639  T
Q  280 tcttctatttgtgtggg 296  Q
    |||||||||||||||||    
T  40528638 tcttctatttgtgtggg 40528622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 18066820 - 18066719
Alignment:
Q  182 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 281  Q
    |||||||||||||||||||||||||||| || ||||    |||||||| ||||||||||||||||||||| |||| ||||||||||||||| ||||| ||    
T  18066820 taggaaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatctcacaaccatactttctc 18066721  T
Q  282 tt 283  Q
    ||    
T  18066720 tt 18066719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 9241594 - 9241664
Alignment:
Q  226 tacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggg 296  Q
    ||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  9241594 tacaccctatatattagggatatttttgtaagttcatctcacaaccacactttatcttctatttatgtggg 9241664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 33630091 - 33629994
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||| |||||||||||| || ||||||||||||||||||| ||| |||||||| ||||| |||| ||||||||||||| | ||||| ||||    
T  33630091 aaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaatttcatctcacaactatactttctctt 33629994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 16603729 - 16603633
Alignment:
Q  181 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactt 277  Q
    |||||||||||||||||| |||||||||| || ||||||| ||| ||||||||||| ||||  || |||||||||| ||||||||||||||| ||||    
T  16603729 ataggaaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaaattcatctcacaaccatactt 16603633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 3743773 - 3743876
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 285  Q
    |||||||| |||  ||||||||||||| | |  | |||| |||||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||||    
T  3743773 aaaatgttccatatacaccctttattcatccctcccattatacaccccatatattaagtatattttgataagttcatctcacaaccacactttatcttct 3743872  T
Q  286 attt 289  Q
    ||||    
T  3743873 attt 3743876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 278
Target Start/End: Complemental strand, 16358933 - 16358839
Alignment:
Q  185 gaaaatgttacat-gaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttt 278  Q
    ||||||||||||| ||| |||||||| || ||||||  |||||||| |||||| |||| | |||||||| ||| ||||||||||||||| |||||    
T  16358933 gaaaatgttacattgaagaccctttaatcatacaccctattgtacatcccatgcattaagaatattttgataaattcatctcacaaccatacttt 16358839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 221
Target Start/End: Original strand, 28977146 - 28977183
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctc 221  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28977146 ggaaaatgttacatgaacaccctttattcctacacctc 28977183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 10678210 - 10678153
Alignment:
Q  226 tacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||| ||||| ||| |||||||||| ||||||||||||||| ||||| ||||    
T  10678210 tacaccccatatattaaggacattttggtaaattcatctcacaaccatactttctctt 10678153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 19386671 - 19386635
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacc 219  Q
    ||||||||||||||||||||||||||| || ||||||    
T  19386671 aggaaaatgttacatgaacaccctttaatcatacacc 19386635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 32328863 - 32328815
Alignment:
Q  238 attagggatattttggtaagttcatctcacaaccacactttatcttcta 286  Q
    |||||| ||||||||||||||| |||||||||| | ||||| |||||||    
T  32328863 attaggaatattttggtaagtttatctcacaactatactttctcttcta 32328815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 37038661 - 37038609
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatg 236  Q
    |||||||||||||| ||||||||||||| ||| ||  | ||||||||||||||    
T  37038661 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatg 37038609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 3e-51; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 182 - 296
Target Start/End: Original strand, 30838630 - 30838744
Alignment:
Q  182 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 281  Q
    |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30838630 taggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 30838729  T
Q  282 ttctatttgtgtggg 296  Q
    |||||||||||||||    
T  30838730 ttctatttgtgtggg 30838744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 1750414 - 1750526
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1750414 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 1750513  T
Q  284 ctatttgtgtggg 296  Q
    |||||||||||||    
T  1750514 ctatttgtgtggg 1750526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 185 - 296
Target Start/End: Original strand, 19047158 - 19047269
Alignment:
Q  185 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 284  Q
    |||||||||||||||||||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19047158 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 19047257  T
Q  285 tatttgtgtggg 296  Q
    ||||||||||||    
T  19047258 tatttgtgtggg 19047269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 12302354 - 12302241
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12302354 aggaaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatct 12302255  T
Q  283 tctatttgtgtggg 296  Q
    ||||||| ||||||    
T  12302254 tctatttatgtggg 12302241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 43335864 - 43335751
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||||||||||| ||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43335864 aggaaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaactacactttatct 43335765  T
Q  283 tctatttgtgtggg 296  Q
    ||||||| ||||||    
T  43335764 tctatttatgtggg 43335751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 16096747 - 16096859
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  16096747 ggaaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggtgagttaatctcacaaccacactttatctt 16096846  T
Q  284 ctatttgtgtggg 296  Q
    ||| || ||||||    
T  16096847 ctacttatgtggg 16096859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 180 - 296
Target Start/End: Complemental strand, 43490505 - 43490389
Alignment:
Q  180 aataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttta 279  Q
    ||||| |||||||||||||||||||||||||||||||| | |||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||    
T  43490505 aatagaaaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctcataaccacacttta 43490406  T
Q  280 tcttctatttgtgtggg 296  Q
    |||||||||| ||||||    
T  43490405 tcttctatttatgtggg 43490389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 4764827 - 4764714
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||||||   |||||||||||| |||||||||||||||||||||||||    
T  4764827 aggaaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatctcacaaccacactttatct 4764728  T
Q  283 tctatttgtgtggg 296  Q
    ||||||||||||||    
T  4764727 tctatttgtgtggg 4764714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 185 - 291
Target Start/End: Complemental strand, 34817875 - 34817769
Alignment:
Q  185 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 284  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||| | || | | |||||||||| ||||||||||||||||||||| |||||    
T  34817875 gaaaatgttacatgaacaccctttattcacacacctcattgtacaccccatgcactacgcacattttggtaaattcatctcacaaccacactttctcttc 34817776  T
Q  285 tatttgt 291  Q
    |||||||    
T  34817775 tatttgt 34817769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 186 - 278
Target Start/End: Original strand, 33229303 - 33229396
Alignment:
Q  186 aaaatgttacatgaacacccttt-attcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttt 278  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||    
T  33229303 aaaatgatacatgaacacccttttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatcatacaatcacacttt 33229396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 184 - 296
Target Start/End: Complemental strand, 13780835 - 13780723
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||| |||||  |||||||  |||||||||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  13780835 ggaaaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatattttgataaattcatctcacaaccacactttctctt 13780736  T
Q  284 ctatttgtgtggg 296  Q
    |||||| ||||||    
T  13780735 ctatttatgtggg 13780723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 43114556 - 43114656
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||| || ||||||  ||||||||||||||| |||||||| |||||||||| ||||||||||||||| ||||| |||    
T  43114556 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctct 43114655  T
Q  283 t 283  Q
    |    
T  43114656 t 43114656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 184 - 283
Target Start/End: Complemental strand, 12415560 - 12415461
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||||||| |||||||| |||||||||| || |||||||||||| ||||| ||||    
T  12415560 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttctctt 12415461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 184 - 283
Target Start/End: Complemental strand, 12427620 - 12427521
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||||||| |||||||| |||||||||| || |||||||||||| ||||| ||||    
T  12427620 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttctctt 12427521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 184 - 296
Target Start/End: Complemental strand, 42849946 - 42849847
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  42849946 ggaaaatgttacatgaacaccctttattcctacacc------------ccatgtattagggatattttgataagttcatctcacaaccacactttat-tt 42849860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 11825752 - 11825655
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||| || ||||||  ||||||||||||||| |||||||| |||||||||| |||||||||||| || ||||| ||||    
T  11825752 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaatcatactttctctt 11825655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 41282072 - 41281975
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||| || ||||||  ||||||||||||||| |||||||| |||||| ||| ||||||||||||||| ||||| ||||    
T  41282072 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatctcacaaccatactttctctt 41281975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 16803967 - 16804067
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||| || ||||||  |||||||| |||||| |||||||| |||||| ||| ||||||||||||||| ||||| |||    
T  16803967 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctct 16804066  T
Q  283 t 283  Q
    |    
T  16804067 t 16804067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 16843249 - 16843349
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||| || ||||||  |||||||| |||||| |||||||| |||||| ||| ||||||||||||||| ||||| |||    
T  16843249 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctct 16843348  T
Q  283 t 283  Q
    |    
T  16843349 t 16843349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 8896688 - 8896573
Alignment:
Q  179 taataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttt 278  Q
    |||||| |||||||||||||||||||||||||||  |||   |||||||||||| ||  | |||| |||||||||||| |||||||||||| ||||||||    
T  8896688 taatagaaaaatgttacatgaacaccctttattcacacattccattgtacaccctatacaataggaatattttggtaaattcatctcacaatcacacttt 8896589  T
Q  279 atcttctatttgtgtg 294  Q
     | |||||||||||||    
T  8896588 cttttctatttgtgtg 8896573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 296
Target Start/End: Original strand, 42026763 - 42026881
Alignment:
Q  180 aataggaaaatgttacatgaacaccc--tttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactt 277  Q
    ||||||||||||||||||||||||||  ||||||| ||||   ||||||||| |||  | |||||||||||||||| || ||||||||||||| ||||||    
T  42026763 aataggaaaatgttacatgaacacccaatttattcatacattccattgtacatcccgcgcattagggatattttggcaaattcatctcacaactacactt 42026862  T
Q  278 tatcttctatttgtgtggg 296  Q
    | | |||||||||||||||    
T  42026863 tcttttctatttgtgtggg 42026881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 18491702 - 18491798
Alignment:
Q  181 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactt 277  Q
    ||||||||||||||||||||||||||||| || ||||||  |||||||||| |||| |||| | | |||||||||| ||||||||||||||| ||||    
T  18491702 ataggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatctcacaaccatactt 18491798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 222 - 296
Target Start/End: Complemental strand, 39149354 - 39149280
Alignment:
Q  222 attgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggg 296  Q
    |||||||| || ||||||||| |||||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  39149354 attgtacatcctatgtattagagatattttggtaagttcatcccacaactacactttatcttttatttgtgtggg 39149280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 966935 - 966835
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||| || ||||||  ||||||||||||||| |||| | |  ||||||||| |||||||||||| || ||||| |||    
T  966935 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaagaacgttttggtaaattcatctcacaaacatactttctct 966836  T
Q  283 t 283  Q
    |    
T  966835 t 966835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 34895842 - 34895742
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||||| ||||||||||||||| |||| ||  |||||  ||||||||||||||| |||||||| || ||||||| |||||||||||| || |||||||||    
T  34895842 aggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatct 34895743  T
Q  283 t 283  Q
    |    
T  34895742 t 34895742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 6518566 - 6518484
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaa 269  Q
    ||||||||||||||||||| |||| || |||||   ||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  6518566 aaaatgttacatgaacacc-tttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaa 6518484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 4299518 - 4299435
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaa 269  Q
    ||||||||| |||||||||||||| || ||||||  ||||||||| ||||| ||||  || |||||||||| ||||||||||||    
T  4299518 aaaatgttatatgaacaccctttaatcatacaccctattgtacactccatgcattaatgacattttggtaaattcatctcacaa 4299435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 273
Target Start/End: Original strand, 7070418 - 7070505
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccac 273  Q
    ||||||||||||||||||||||||||| |||| | |||||||  | |||| |||| |||| |||||| ||| ||||||| ||||||||    
T  7070418 aaaatgttacatgaacaccctttattcatacatcccattgtaacctccatttattggggacattttgataaattcatcttacaaccac 7070505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 4452012 - 4451951
Alignment:
Q  222 attgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||  ||| ||||||||||||||||||| ||||||||||||||| ||||| ||||    
T  4452012 attgtacaccatatgcattagggatattttggtaaattcatctcacaaccatactttctctt 4451951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 14285674 - 14285758
Alignment:
Q  182 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctca 266  Q
    ||||||||| |||||  ||||||||||| || ||||||  ||||||||||| || |||||  ||||||||||||| |||||||||    
T  14285674 taggaaaatattacacaaacaccctttaatcatacaccctattgtacaccctatatattaaagatattttggtaaattcatctca 14285758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 4e-50; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 184 - 296
Target Start/End: Complemental strand, 24001112 - 24001000
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24001112 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 24001013  T
Q  284 ctatttgtgtggg 296  Q
    |||||||||||||    
T  24001012 ctatttgtgtggg 24001000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 182 - 294
Target Start/End: Original strand, 35069719 - 35069831
Alignment:
Q  182 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 281  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35069719 taggaaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatc 35069818  T
Q  282 ttctatttgtgtg 294  Q
    |||||||| ||||    
T  35069819 ttctatttatgtg 35069831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 184 - 296
Target Start/End: Complemental strand, 42538531 - 42538419
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42538531 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42538432  T
Q  284 ctatttgtgtggg 296  Q
    |||||||||||||    
T  42538431 ctatttgtgtggg 42538419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 5015394 - 5015507
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||| ||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5015394 aggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatct 5015493  T
Q  283 tctatttgtgtggg 296  Q
    ||||||||||||||    
T  5015494 tctatttgtgtggg 5015507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 184 - 296
Target Start/End: Complemental strand, 5811024 - 5810912
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||    
T  5811024 ggaaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatctcacaaccacactttatctt 5810925  T
Q  284 ctatttgtgtggg 296  Q
    |||||||||||||    
T  5810924 ctatttgtgtggg 5810912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 42972852 - 42972964
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||| |||||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42972852 ggaaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacattttatctt 42972951  T
Q  284 ctatttgtgtggg 296  Q
    |||||||||||||    
T  42972952 ctatttgtgtggg 42972964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 43343722 - 43343612
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 285  Q
    ||||||||||||||||| | |||||| |||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43343722 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatcttct 43343623  T
Q  286 atttgtgtggg 296  Q
    |||||||||||    
T  43343622 atttgtgtggg 43343612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 44417032 - 44416922
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 285  Q
    ||||||||||||||||| | |||||| |||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44417032 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatcttct 44416933  T
Q  286 atttgtgtggg 296  Q
    |||||||||||    
T  44416932 atttgtgtggg 44416922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 180 - 296
Target Start/End: Original strand, 44326174 - 44326290
Alignment:
Q  180 aataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttta 279  Q
    ||||| |||||||||||| |||||||||||||| |||| | ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  44326174 aatagaaaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaaccacacttta 44326273  T
Q  280 tcttctatttgtgtggg 296  Q
    || ||||||| ||||||    
T  44326274 tcatctatttatgtggg 44326290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 9216299 - 9216413
Alignment:
Q  181 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 280  Q
    ||||||||||||||||||||||||||||||||||| | |  ||||||||||| ||| ||||| ||||||||||||||||||||||||||||||| |||||    
T  9216299 ataggaaaatgttacatgaacaccctttattcctatatcctattgtacaccc-atgcattagagatattttggtaagttcatctcacaaccacattttat 9216397  T
Q  281 cttctatttgtgtggg 296  Q
    ||||||||||||||||    
T  9216398 cttctatttgtgtggg 9216413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 4638297 - 4638187
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 285  Q
    ||||||||||||||||||| ||||||| |||||   |||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  4638297 aaaatgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagttcatctcacaaccatactttatcttct 4638198  T
Q  286 atttgtgtggg 296  Q
    |||||||||||    
T  4638197 atttgtgtggg 4638187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 10573751 - 10573861
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 285  Q
    |||||||||||| |||||||||||||| |||| |  |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  10573751 aaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctcacaaccacactttatcttct 10573850  T
Q  286 atttgtgtggg 296  Q
    |||| ||||||    
T  10573851 atttatgtggg 10573861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 187 - 296
Target Start/End: Complemental strand, 26898499 - 26898390
Alignment:
Q  187 aaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttcta 286  Q
    |||||||||||||||||| ||||||| ||||||  ||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatcttacaaccacactttatattcta 26898400  T
Q  287 tttgtgtggg 296  Q
    ||||||||||    
T  26898399 tttgtgtggg 26898390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 45326020 - 45326132
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||| |||||||| |||||| ||||||| |||| | ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  45326020 ggaaagtgttacataaacaccttttattcatacatcacattgtacaccccatatattagggatattttggtaagttcatctcacaatcacactttatctt 45326119  T
Q  284 ctatttgtgtggg 296  Q
    |||||| ||||||    
T  45326120 ctatttatgtggg 45326132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 16180459 - 16180345
Alignment:
Q  181 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 280  Q
    |||| |||||||||||| |||||| |||||||||||||| |||||||||||||| ||||||   |||||||||||| |||||||||||||||||||||||    
T  16180459 atagaaaaatgttacatcaacaccatttattcctacacc-cattgtacaccccacgtattataaatattttggtaaattcatctcacaaccacactttat 16180361  T
Q  281 cttctatttgtgtggg 296  Q
    ||||||||||||||||    
T  16180360 cttctatttgtgtggg 16180345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 193 - 296
Target Start/End: Complemental strand, 32029908 - 32029805
Alignment:
Q  193 tacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtg 292  Q
    ||||| |||||  |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||    
T  32029908 tacataaacactttttattcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctaacaaccacactttatcttctatttatg 32029809  T
Q  293 tggg 296  Q
    ||||    
T  32029808 tggg 32029805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 182 - 296
Target Start/End: Complemental strand, 5194333 - 5194219
Alignment:
Q  182 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 281  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| ||| |||||||||| ||| |||||||||||| |||||||  ||    
T  5194333 taggaaaatgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattttgataaattcatctcacaatcacacttactc 5194234  T
Q  282 ttctatttgtgtggg 296  Q
    |||||||||||||||    
T  5194233 ttctatttgtgtggg 5194219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 41861673 - 41861788
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtatta--gggatattttggtaagttcatctcacaaccacactttat 280  Q
    |||||||||||||||||||||||||||||| ||||||  ||| ||||||| ||||||||  | |||||||||||||||| ||||||||||||||||||||    
T  41861673 aggaaaatgttacatgaacaccctttattcatacacccaattatacaccctatgtattatagagatattttggtaagtttatctcacaaccacactttat 41861772  T
Q  281 cttctatttgtgtggg 296  Q
    ||||||||||| ||||    
T  41861773 cttctatttgtatggg 41861788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 180 - 296
Target Start/End: Original strand, 43317439 - 43317555
Alignment:
Q  180 aataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttta 279  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||| || |||  |||||||||||||| ||| |||||||||||| |||||||      
T  43317439 aataggaaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatctcacaatcacacttac 43317538  T
Q  280 tcttctatttgtgtggg 296  Q
    |||||||||||||||||    
T  43317539 tcttctatttgtgtggg 43317555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 200 - 296
Target Start/End: Complemental strand, 27393344 - 27393248
Alignment:
Q  200 acaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggg 296  Q
    |||||||||||||||||| |  ||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  27393344 acaccctttattcctacatcctattgtacactctatgtattagggatatttttgtaagttcatctcacaaccacactttatcttctatttatgtggg 27393248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 24280699 - 24280584
Alignment:
Q  181 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 280  Q
    ||||||||||||||| |||||||||||||||| ||||||  ||| |||| |||||| | |||  |||||||||||| |||||||||||| |||||||| |    
T  24280699 ataggaaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatctcacaatcacactttct 24280600  T
Q  281 cttctatttgtgtggg 296  Q
    ||||||||||||||||    
T  24280599 cttctatttgtgtggg 24280584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 179 - 296
Target Start/End: Complemental strand, 38160699 - 38160567
Alignment:
Q  179 taataggaaaatgttacatgaacaccctttattcctaca--cct-------------cattgtacaccccatgtattagggatattttggtaagttcatc 263  Q
    |||||||||||||||||||||||||||||||||||||||  |||             ||||||||||||||||||||||||||||||| |||| ||||||    
T  38160699 taataggaaaatgttacatgaacaccctttattcctacatcccttattcttacactccattgtacaccccatgtattagggatattttagtaacttcatc 38160600  T
Q  264 tcacaaccacactttatcttctatttgtgtggg 296  Q
    ||||||| |||||||||||||||||| ||||||    
T  38160599 tcacaactacactttatcttctatttatgtggg 38160567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 272
Target Start/End: Original strand, 40236918 - 40237007
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 272  Q
    ||||||||||||||||||||||||||| || |||| |  ||||||||||||||| |||||||| |||||||||| |||||||||||||||    
T  40236918 aggaaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatctcacaacca 40237007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 283
Target Start/End: Original strand, 31513287 - 31513386
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||| ||||| || ||||||  |||||| |||||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  31513287 ggaaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 31513386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 283
Target Start/End: Complemental strand, 31408732 - 31408634
Alignment:
Q  185 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||||||||||||||||| || |||||   |||||||| |||||| |||| |||||||||||||| ||||| ||||||||| ||||| ||||    
T  31408732 gaaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaaattcatttcacaaccatactttctctt 31408634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 27535332 - 27535232
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||| || |||||   ||||||||| |||||| |||  || |||||||||| ||||||||||||| | ||||| |||    
T  27535332 aggaaaatgttacatgaacaccctttaatcatacactctattgtacactccatgtgttaaagacattttggtaatttcatctcacaactatactttctct 27535233  T
Q  283 t 283  Q
    |    
T  27535232 t 27535232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 33384869 - 33384970
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctc-attgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 281  Q
    |||||||||||||||||||| | |||| || |||||| | |||||| || ||||| |||||||| |||||||||| |||||||||||| || ||||| ||    
T  33384869 aggaaaatgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattttggtaaattcatctcacaaacatactttctc 33384968  T
Q  282 tt 283  Q
    ||    
T  33384969 tt 33384970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 39998408 - 39998475
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatatttt 251  Q
    ||||||||||||||||||||  |||| || |||| |  ||||||||||||||||||||||||||||||    
T  39998408 ggaaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtattagggatatttt 39998475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 47279799 - 47279744
Alignment:
Q  182 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgt 237  Q
    ||||||||| |||||| || ||||||||||| |||| | |||||||||||||||||    
T  47279799 taggaaaatattacataaataccctttattcatacatcccattgtacaccccatgt 47279744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 4e-50; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 184 - 296
Target Start/End: Complemental strand, 2614749 - 2614637
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2614749 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 2614650  T
Q  284 ctatttgtgtggg 296  Q
    |||||||||||||    
T  2614649 ctatttgtgtggg 2614637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 22512305 - 22512417
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22512305 ggaaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 22512404  T
Q  284 ctatttgtgtggg 296  Q
    |||||||||||||    
T  22512405 ctatttgtgtggg 22512417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 184 - 296
Target Start/End: Complemental strand, 41334763 - 41334651
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41334763 ggaaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 41334664  T
Q  284 ctatttgtgtggg 296  Q
    |||||||||||||    
T  41334663 ctatttgtgtggg 41334651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 18033981 - 18034094
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18033981 aggaaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatct 18034080  T
Q  283 tctatttgtgtggg 296  Q
    ||||||||||||||    
T  18034081 tctatttgtgtggg 18034094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 7617132 - 7617245
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||||||||||||||||||||||||||||| |||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7617132 aggaaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 7617231  T
Q  283 tctatttgtgtggg 296  Q
    ||||||| ||||||    
T  7617232 tctatttatgtggg 7617245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 33801468 - 33801581
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33801468 aggaaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatct 33801567  T
Q  283 tctatttgtgtggg 296  Q
    ||||||||||||||    
T  33801568 tctatttgtgtggg 33801581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 5256997 - 5257107
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 285  Q
    |||||||||||| |||||| ||||||| |||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5256997 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatcttct 5257096  T
Q  286 atttgtgtggg 296  Q
    |||| ||||||    
T  5257097 atttatgtggg 5257107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 38470578 - 38470691
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||| |||||||||||||| ||||   ||||||||||||||||||||| |||||||||||||| ||||| |||||| ||||||||||||    
T  38470578 aggaaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaaattcatttcacaatcacactttatct 38470677  T
Q  283 tctatttgtgtggg 296  Q
    ||||||| ||||||    
T  38470678 tctatttatgtggg 38470691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 184 - 283
Target Start/End: Complemental strand, 32473494 - 32473395
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||||| || ||||||| |||||||||| |||| ||||||||||||||||||| ||||||||||||||| ||||| ||||    
T  32473494 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatctcacaaccatactttctctt 32473395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 184 - 259
Target Start/End: Complemental strand, 33855143 - 33855068
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagtt 259  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||    
T  33855143 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaacattttggtaagtt 33855068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 39122535 - 39122421
Alignment:
Q  181 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 280  Q
    |||||||| | ||||||||||||| ||||||| |||| || |||  |||||| |||||||||| |||||||||||| ||||||||||||| |||||||||    
T  39122535 ataggaaactattacatgaacaccttttattcatacatctaattagacaccc-atgtattaggaatattttggtaaattcatctcacaactacactttat 39122437  T
Q  281 cttctatttgtgtggg 296  Q
    ||||||||||||||||    
T  39122436 cttctatttgtgtggg 39122421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 17208070 - 17208173
Alignment:
Q  180 aataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttta 279  Q
    |||||||||||||||| ||||||||||||| || ||||| | ||||||||||||||| |||| ||| |||||||||| ||||||||||||||| |||||     
T  17208070 aataggaaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaaattcatctcacaaccatactttc 17208169  T
Q  280 tctt 283  Q
    ||||    
T  17208170 tctt 17208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 186 - 266
Target Start/End: Complemental strand, 25915085 - 25915006
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctca 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||| ||| ||||||||||    
T  25915085 aaaatgttacatgaacaccctttattcctacacctcattgtacacccaatgtatta-gaatatttttgtaggttcatctca 25915006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 30622819 - 30622720
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||||||||||||||||||| |||||| || ||||||  |||||| | |||||| |||| |||||||||||||| || |||||||||||| ||||| |||    
T  30622819 aggaaaatgttacatgaacatcctttaatcatacaccctattgta-agcccatgcattaaggatattttggtaaatttatctcacaaccatactttctct 30622721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 183 - 292
Target Start/End: Original strand, 33703140 - 33703249
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33703140 aggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 33703239  T
Q  283 tctatttgtg 292  Q
    ||||||||||    
T  33703240 tctatttgtg 33703249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 35017733 - 35017844
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35017733 ggaaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgtat-agggatattttggtaagttcatctcacaaccacactttatctt 35017831  T
Q  284 ctatttgtgtggg 296  Q
    |||||||||||||    
T  35017832 ctatttgtgtggg 35017844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 1771367 - 1771254
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||    
T  1771367 aggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcacaaccacattttatct 1771268  T
Q  283 tctatttgtgtggg 296  Q
    ||||||| ||||||    
T  1771267 tctatttatgtggg 1771254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 39631102 - 39631213
Alignment:
Q  186 aaaatgttacatgaacacccttt-attcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 284  Q
    |||||| ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39631102 aaaatgatacatgaacccccttttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 39631201  T
Q  285 tatttgtgtggg 296  Q
    ||||||||||||    
T  39631202 tatttgtgtggg 39631213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 186 - 292
Target Start/End: Complemental strand, 43949900 - 43949793
Alignment:
Q  186 aaaatgttacatgaacacccttt-attcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 284  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43949900 aaaatgatacatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 43949801  T
Q  285 tatttgtg 292  Q
    ||||||||    
T  43949800 tatttgtg 43949793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 25051692 - 25051805
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||||||||| |||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25051692 aggaaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagttcatctcacaatcacactttatct 25051791  T
Q  283 tctatttgtgtggg 296  Q
    ||||||| ||||||    
T  25051792 tctatttatgtggg 25051805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 28982923 - 28982810
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||||| |||||||  |||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  28982923 aggaaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctcacaaccgcactttatct 28982824  T
Q  283 tctatttgtgtggg 296  Q
    ||||||||||||||    
T  28982823 tctatttgtgtggg 28982810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 27550309 - 27550421
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27550309 ggaaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatcttacaaccacactttatctt 27550408  T
Q  284 ctatttgtgtggg 296  Q
    |||||| ||||||    
T  27550409 ctatttatgtggg 27550421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 43514784 - 43514674
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 285  Q
    |||||||||||||||||||||||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  43514784 aaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcacaaccacaccttatcttct 43514685  T
Q  286 atttgtgtggg 296  Q
    |||||||||||    
T  43514684 atttgtgtggg 43514674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 184 - 289
Target Start/End: Complemental strand, 27316813 - 27316708
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  27316813 ggaaaatgttaaacgaacaccctttattcctacacctcattatacaccccatgtattaaggatattttggtaagttcatctcataaccacactttatctt 27316714  T
Q  284 ctattt 289  Q
    ||||||    
T  27316713 ctattt 27316708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 27864563 - 27864676
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||| |||||| ||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27864563 aggaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttattt 27864662  T
Q  283 tctatttgtgtggg 296  Q
    ||||||| ||||||    
T  27864663 tctatttatgtggg 27864676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 55966447 - 55966334
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||| |||||||||||||| |||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  55966447 aggaaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctcacaaccacaatttatct 55966348  T
Q  283 tctatttgtgtggg 296  Q
    ||||||| ||||||    
T  55966347 tctatttatgtggg 55966334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 184 - 294
Target Start/End: Original strand, 12496956 - 12497066
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||||    
T  12496956 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttatctt 12497055  T
Q  284 ctatttgtgtg 294  Q
    |||||||||||    
T  12497056 ctatttgtgtg 12497066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 27893940 - 27893830
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 285  Q
    |||||||||||| |||||| ||||||| |||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27893940 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatcttct 27893841  T
Q  286 atttgtgtggg 296  Q
    |||| ||||||    
T  27893840 atttatgtggg 27893830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 23035979 - 23036092
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||    
T  23035979 aggaaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatctcacaaccacactttatct 23036078  T
Q  283 tctatttgtgtggg 296  Q
    ||||||| ||||||    
T  23036079 tctatttatgtggg 23036092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 183 - 296
Target Start/End: Original strand, 28988472 - 28988585
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||| |||||| ||| ||||||||| ||||||||||| |||    
T  28988472 aggaaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctcataaccacactttctct 28988571  T
Q  283 tctatttgtgtggg 296  Q
    ||||||||||||||    
T  28988572 tctatttgtgtggg 28988585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 182 - 296
Target Start/End: Complemental strand, 48463552 - 48463438
Alignment:
Q  182 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 281  Q
    |||||||||||||||| |||||| ||||||| ||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||     
T  48463552 taggaaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatactttatt 48463453  T
Q  282 ttctatttgtgtggg 296  Q
    |||||||| ||||||    
T  48463452 ttctatttatgtggg 48463438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 187 - 296
Target Start/End: Complemental strand, 23204875 - 23204766
Alignment:
Q  187 aaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttcta 286  Q
    ||||||||||||||||| ||||||||||||| | ||||||||| || |||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  23204875 aaatgttacatgaacactctttattcctacatcccattgtacatcctatgtattagggatatttttgtaagttcatgtcacaaccacactttatcttcta 23204776  T
Q  287 tttgtgtggg 296  Q
    ||| ||||||    
T  23204775 tttatgtggg 23204766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 185 - 296
Target Start/End: Original strand, 41878407 - 41878518
Alignment:
Q  185 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 284  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||| ||  ||||||||||||||| ||||||||||||||||||| || || |||||    
T  41878407 gaaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagttcatctcacaaccaaaccttctcttc 41878506  T
Q  285 tatttgtgtggg 296  Q
    ||||||||||||    
T  41878507 tatttgtgtggg 41878518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 43735744 - 43735854
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 285  Q
    ||||| ||||||||||| |||||||||||||| |||||| ||||  ||||||||||| ||||||||| |||||||||||||||| |||||||||||||||    
T  43735744 aaaatattacatgaacatcctttattcctacatctcattatacattccatgtattagagatattttgataagttcatctcacaatcacactttatcttct 43735843  T
Q  286 atttgtgtggg 296  Q
    |||||||||||    
T  43735844 atttgtgtggg 43735854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 31680904 - 31681014
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 285  Q
    |||||||||| | |||||| ||||||| ||||   ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31680904 aaaatgttacgtaaacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagttcatctcacaaccacactttatcttct 31681003  T
Q  286 atttgtgtggg 296  Q
    |||| ||||||    
T  31681004 atttatgtggg 31681014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 41847971 - 41848083
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||||| ||||| ||||| |||  |||||||||||||||||||||| ||||| || ||||||| || |||||| |||||||||||||| ||||    
T  41847971 ggaaaatgttacaagaacatccttttttcacacacctcattgtacaccccatgcattagagacattttggcaaattcatcgcacaaccacactttctctt 41848070  T
Q  284 ctatttgtgtggg 296  Q
    |||||||||||||    
T  41848071 ctatttgtgtggg 41848083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 184 - 291
Target Start/End: Complemental strand, 45490413 - 45490306
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||||||||||||  ||||||  |||| |  |||||||||| ||||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  45490413 ggaaaatgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggatactttagtaaattcatctcacaaccacactttatctt 45490314  T
Q  284 ctatttgt 291  Q
    ||||||||    
T  45490313 ctatttgt 45490306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 184 - 283
Target Start/End: Complemental strand, 17619252 - 17619153
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||||||||||||| |||| || ||||||  ||||||||||||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  17619252 ggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 17619153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 21687004 - 21687113
Alignment:
Q  182 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 281  Q
    ||||||||||||||||||||| ||||||||  |||||| |||| |||| |  |||||||||  ||||||| |||||||||||||| ||||| ||||||||    
T  21687004 taggaaaatgttacatgaacatcctttatttttacaccccattatacatcttatgtattagaaatattttagtaagttcatctcataaccatactttatc 21687103  T
Q  282 ttctatttgt 291  Q
    ||||||||||    
T  21687104 ttctatttgt 21687113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 711959 - 712059
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    ||||||||||||||||||||||||||| || ||||||  ||||||||||| ||| |||| |||||||||||||| |||||||||||| || ||||| |||    
T  711959 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatctcacaaacatactttctct 712058  T
Q  283 t 283  Q
    |    
T  712059 t 712059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 283
Target Start/End: Complemental strand, 55272476 - 55272377
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||||||||||| |||||| || |||||   ||||||||||||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  55272476 ggaaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 55272377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 51512323 - 51512253
Alignment:
Q  226 tacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggg 296  Q
    ||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||| ||||||||||||    
T  51512323 tacaccccatgtattagagatattttggtaagttcatcttataaccacactttatcttttatttgtgtggg 51512253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 41327641 - 41327531
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 285  Q
    ||||||||||||  |||||||||||||  ||||| |||||||||||  ||| | || ||| |||||||||| ||||||||||| ||||||||| |||||     
T  41327641 aaaatgttacatagacaccctttattcacacaccccattgtacaccttatgcactacggacattttggtaaattcatctcacatccacactttctcttca 41327542  T
Q  286 atttgtgtggg 296  Q
    |||||||||||    
T  41327541 atttgtgtggg 41327531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 283
Target Start/End: Complemental strand, 48435682 - 48435580
Alignment:
Q  181 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 280  Q
    |||||||| ||||||||||||||| |||| ||  |||||  ||||||||||||||| |||||||| || ||||||| |||||||||||| || |||||||    
T  48435682 ataggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttat 48435583  T
Q  281 ctt 283  Q
    |||    
T  48435582 ctt 48435580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 283
Target Start/End: Original strand, 32728355 - 32728456
Alignment:
Q  182 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 281  Q
    ||||||||||||||||||||| |||||| || ||||||  ||||||||||||||| |||| ||| ||||| |||| |||||||||||| || ||||| ||    
T  32728355 taggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatctcacaatcatactttctc 32728454  T
Q  282 tt 283  Q
    ||    
T  32728455 tt 32728456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 186 - 278
Target Start/End: Complemental strand, 3756344 - 3756252
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttt 278  Q
    |||||||||||||||||||||||| || ||||||  ||||||||||||||| |||| ||||||||| |||| || ||||||||| || |||||    
T  3756344 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatctcacaatcatacttt 3756252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 46412562 - 46412457
Alignment:
Q  181 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 280  Q
    |||| |||||||||| |||||||| ||||||||||||| ||||| |          |||||| ||||||||||||||||| |||||||||||||||||||    
T  46412562 atagaaaaatgttacgtgaacaccttttattcctacacttcattat----------tattagagatattttggtaagttcttctcacaaccacactttat 46412473  T
Q  281 cttctatttgtgtggg 296  Q
    ||||||||| ||||||    
T  46412472 cttctatttatgtggg 46412457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 35037007 - 35037093
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 272  Q
    |||||||||||||| |||||||||  | |||||   ||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  35037007 aaaatgttacatgagcaccctttaaccatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaacca 35037093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 960971 - 960890
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatct 264  Q
    ||||||||||||||||||||||||||| || |||||   ||||||||||| ||  |||||||| |||||||||| |||||||    
T  960971 aggaaaatgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattttggtaaattcatct 960890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 269
Target Start/End: Complemental strand, 46827807 - 46827721
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaa 269  Q
    ||||||||||||||||||||||||||| || |||||   ||||||||||| ||| |||| | |  ||||||||| || |||||||||    
T  46827807 aggaaaatgttacatgaacaccctttaatcatacactctattgtacacccaatgcattaagaacgttttggtaaatttatctcacaa 46827721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 49229766 - 49229684
Alignment:
Q  182 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatct 264  Q
    ||||||||||||| ||||||| |||||| || ||||||  |||||||||  |||| |||| ||||||| |||||| |||||||    
T  49229766 taggaaaatgttatatgaacatcctttaatcatacaccctattgtacacttcatgcattaaggatattctggtaaattcatct 49229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 19879992 - 19880053
Alignment:
Q  222 attgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||| ||||| ||| |||||||||| |||||||||||| || ||||| ||||    
T  19879992 attgtacaccccatatattatggacattttggtaaattcatctcacaatcatactttctctt 19880053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 283
Target Start/End: Original strand, 38851515 - 38851612
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||||||| | |||||| || |||| |  | ||||||| ||||| |||| ||| |||||| ||| ||||||||||||||| ||||| ||||    
T  38851515 aaaatgttacatgaatatcctttaatcatacatcataatgtacactccatgcattatggacattttgataaattcatctcacaaccatactttctctt 38851612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 30189269 - 30189324
Alignment:
Q  180 aataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccat 235  Q
    ||||||||||||||||||||||||| |||||||  ||||  ||| |||||||||||    
T  30189269 aataggaaaatgttacatgaacaccatttattcacacactccatcgtacaccccat 30189324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 50526086 - 50526141
Alignment:
Q  181 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatg 236  Q
    ||||||||||||||||| ||||||||||||| ||| ||  | ||||||||||||||    
T  50526086 ataggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatg 50526141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 56215943 - 56215886
Alignment:
Q  238 attagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggg 296  Q
    ||||| |||||||||| || || |||||||||||||||||| || ||||||||||||||    
T  56215943 attagcgatattttggaaaatttatctcacaaccacactttctc-tctatttgtgtggg 56215886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 36004174 - 36004117
Alignment:
Q  226 tacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||| ||||||||| |||||| ||| || |||||||||||| ||||| ||||    
T  36004174 tacaccccatatattagggacattttgataaatttatctcacaaccatactttctctt 36004117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 14291 - 14176
Alignment:
Q  181 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 280  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||    
T  14291 ataggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttat 14192  T
Q  281 cttctatttgtgtggg 296  Q
    ||||||||||||||||    
T  14191 cttctatttgtgtggg 14176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 24619 - 24504
Alignment:
Q  181 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 280  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||    
T  24619 ataggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttat 24520  T
Q  281 cttctatttgtgtggg 296  Q
    ||||||||||||||||    
T  24519 cttctatttgtgtggg 24504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 185 - 296
Target Start/End: Original strand, 112656 - 112767
Alignment:
Q  185 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 284  Q
    |||||||||||||||||||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  112656 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 112755  T
Q  285 tatttgtgtggg 296  Q
    ||||||||||||    
T  112756 tatttgtgtggg 112767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 183 - 288
Target Start/End: Original strand, 11250 - 11355
Alignment:
Q  183 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 282  Q
    |||||||||| |||||||||| |||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11250 aggaaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctcacaaccacactttatct 11349  T
Q  283 tctatt 288  Q
    ||||||    
T  11350 tctatt 11355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 184 - 294
Target Start/End: Complemental strand, 23521 - 23411
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||||    
T  23521 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttatctt 23422  T
Q  284 ctatttgtgtg 294  Q
    |||||||||||    
T  23421 ctatttgtgtg 23411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 45817 - 45720
Alignment:
Q  186 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||||||||||||| || ||||||  |||||||| || |||||||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  45817 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctt 45720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 184 - 283
Target Start/End: Complemental strand, 35556 - 35457
Alignment:
Q  184 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 283  Q
    |||||||||||||| |||||| |||| || ||||||  ||||||||||||||| |||||||| || ||||||| ||||||||||||||| ||||| ||||    
T  35556 ggaaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatctcacaaccatactttctctt 35457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University