View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4282-Insertion-51 (Length: 37)
Name: NF4282-Insertion-51
Description: NF4282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4282-Insertion-51 |
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| [»] chr3 (3 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 37; Significance: 0.0000000000005; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33588716 - 33588680
Alignment:
| Q |
1 |
aatgccacccgtaatgaacaagaatcttcgaccaaac |
37 |
Q |
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| T |
33588716 |
aatgccacccgtaatgaacaagaatcttcgaccaaac |
33588680 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33595888 - 33595852
Alignment:
| Q |
1 |
aatgccacccgtaatgaacaagaatcttcgaccaaac |
37 |
Q |
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| T |
33595888 |
aatgccacccgtaatgaacaagaatcttcgaccaaac |
33595852 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33603019 - 33602983
Alignment:
| Q |
1 |
aatgccacccgtaatgaacaagaatcttcgaccaaac |
37 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
33603019 |
aatgccacccgtaatgaacaagaatcttcgaccaaac |
33602983 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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