View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4282_high_17 (Length: 216)
Name: NF4282_high_17
Description: NF4282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4282_high_17 |
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Alignment Details
Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 52245352 - 52245154
Alignment:
| Q |
1 |
aagtgtatcaaacatgatttcatctatctcttcatatgtgtctttgagagttggacatgtttctcttccttcaagaacgtttcttggacagtatgtgttc |
100 |
Q |
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| T |
52245352 |
aagtgtatcaaacatgatttcatctatctcttcatatgtgtctttgagagttggacatgtttctcttccttcaagaacgtttcttggacagtatgtgttc |
52245253 |
T |
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| Q |
101 |
tcaccgattcctgaactaaccatggttttaaggaggaatctaaattcctctagacctaggtttttgtttctcatgactatttttgcagctgaatctgtg |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
52245252 |
tcaccgattcctgaactaaccatggttttaaggaggaatctaaattcctctagacctaggtttttgtttctcatgactattttagcagctgaatctgtg |
52245154 |
T |
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