View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4282_low_26 (Length: 222)
Name: NF4282_low_26
Description: NF4282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4282_low_26 |
 |  |
|
| [»] scaffold0879 (5 HSPs) |
 |  |  |
|
Alignment Details
Target: scaffold0879 (Bit Score: 88; Significance: 2e-42; HSPs: 5)
Name: scaffold0879
Description:
Target: scaffold0879; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 4542 - 4443
Alignment:
| Q |
14 |
catagggtgtgggaggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtggactcttatagacata |
113 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4542 |
catatggtgggggaggtgagggtgatggtggaggaggagacttgtagacatatggaggtggtggtgatggagagggtggtggtggactcttatagacata |
4443 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0879; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 4734 - 4650
Alignment:
| Q |
14 |
catagggtgtgggaggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtgg |
98 |
Q |
| |
|
|||| |||| |||||| ||||||||||||||||||||||||||||| | |||||| || || |||||||| || ||||||||||| |
|
|
| T |
4734 |
catatggtgggggaggggagggtgatggtggaggaggagacttgtatatatatggtggagggggtgatggggatggtggtggtgg |
4650 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0879; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 4864 - 4794
Alignment:
| Q |
28 |
ggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtgg |
98 |
Q |
| |
|
||||| ||||||||||| || ||||| ||||||||||||||||| ||||| ||||| || ||||| ||||| |
|
|
| T |
4864 |
ggtgaaggtgatggtgggggtggagatttgtagacatatggaggtggtggagatggggatggtggaggtgg |
4794 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0879; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 4807 - 4746
Alignment:
| Q |
37 |
gatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtgg |
98 |
Q |
| |
|
||||||||||| || ||||||||||||||||| || || || |||||||| || |||||||| |
|
|
| T |
4807 |
gatggtggaggtggtgacttgtagacatatggtggagggggggatggagatgggggtggtgg |
4746 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0879; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 202
Target Start/End: Complemental strand, 4551 - 4519
Alignment:
| Q |
170 |
acttgtaaacatagggtgggggaggtgagggtg |
202 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |
|
|
| T |
4551 |
acttgtaaacatatggtgggggaggtgagggtg |
4519 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 27)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 24421232 - 24421331
Alignment:
| Q |
14 |
catagggtgtgggaggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtggactcttatagacata |
113 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24421232 |
cataaggtgggggaggtgagggtgatggtggaggaggagacttgtagacatatggaggtggtggtgatggagagggtggtggtggactcttatagacata |
24421331 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 24470491 - 24470392
Alignment:
| Q |
14 |
catagggtgtgggaggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtggactcttatagacata |
113 |
Q |
| |
|
||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24470491 |
catagggcgggggaggtgagggtgttggtggaggaggagacttgtagacatatggaggtggtggtgatggagagggtggtggtggactcttatagacata |
24470392 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 24470682 - 24470584
Alignment:
| Q |
15 |
atagggtgtgggaggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtggactcttatagacata |
113 |
Q |
| |
|
|||||||| |||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24470682 |
atagggtgggggaggagaaggtgatggtggaggaggagacttgtagacatatggaggtggtggtgatggagagggtggtggtggactcttatagacata |
24470584 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 24477388 - 24477468
Alignment:
| Q |
33 |
gggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtggactcttatagacata |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| | || |||||||| |||||||| |
|
|
| T |
24477388 |
gggtgatggtggaggaggagacttgtagacatatggaggtggtggtgatggagaaggtagaggaggactcttgtagacata |
24477468 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 24477465 - 24477564
Alignment:
| Q |
14 |
catagggtgtgggaggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtggactcttatagacata |
113 |
Q |
| |
|
|||| |||| ||||||||| || ||||| ||||| || |||||||||||||||||||| || ||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
24477465 |
catatggtgggggaggtgaaggagatggaggaggtggtgacttgtagacatatggaggtggaggtgagggagatggtggtggtggactcttatagacata |
24477564 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 24421040 - 24421124
Alignment:
| Q |
14 |
catagggtgtgggaggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtgg |
98 |
Q |
| |
|
|||| |||| |||||| ||||||||||||||||||||||||||||| | |||||| || || |||||||| || ||||||||||| |
|
|
| T |
24421040 |
catatggtgggggaggggagggtgatggtggaggaggagacttgtatatatatggtggagggggtgatggggatggtggtggtgg |
24421124 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 24470395 - 24470311
Alignment:
| Q |
14 |
catagggtgtgggaggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtgg |
98 |
Q |
| |
|
|||| |||| ||||||||| |||||||| ||||| || |||||||||||||||||||| || || || ||||| || |||||||| |
|
|
| T |
24470395 |
catatggtgggggaggtgaaggtgatggaggaggtggtgacttgtagacatatggaggaggaggagagggagatggaggtggtgg |
24470311 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 24481513 - 24481556
Alignment:
| Q |
28 |
ggtgagggtgatggtggaggaggagacttgtagacatatggagg |
71 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
24481513 |
ggtgatggagatggtggaggaggagacttgtagacatatggagg |
24481556 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 24420910 - 24420980
Alignment:
| Q |
28 |
ggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtgg |
98 |
Q |
| |
|
||||| ||||||||||| || ||||| ||||||||||||||||| ||||| ||||| || ||||| ||||| |
|
|
| T |
24420910 |
ggtgaaggtgatggtgggggtggagatttgtagacatatggaggtggtggagatggggatggtggaggtgg |
24420980 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 24470756 - 24470695
Alignment:
| Q |
37 |
gatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtgg |
98 |
Q |
| |
|
||||||||||| || |||||||||||||||||||| || ||||| ||||| || |||||||| |
|
|
| T |
24470756 |
gatggtggaggtggtgacttgtagacatatggaggaggaggtgaaggagatggaggtggtgg |
24470695 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 24477647 - 24477708
Alignment:
| Q |
52 |
gacttgtagacatatggaggcggtggtgatggagagggtggtggtggactcttatagacata |
113 |
Q |
| |
|
|||||||| ||||||||||| |||||||| ||||| |||||||| ||| |||||||||||| |
|
|
| T |
24477647 |
gacttgtacacatatggaggaggtggtgagggagatggtggtggaggagacttatagacata |
24477708 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 24420622 - 24420686
Alignment:
| Q |
28 |
ggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtgg |
92 |
Q |
| |
|
||||| || |||||||| || || |||||||||| |||||||||||||||||| ||||| ||||| |
|
|
| T |
24420622 |
ggtgaaggggatggtggtggtggtgacttgtagatatatggaggcggtggtgaaggagatggtgg |
24420686 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 24421328 - 24421412
Alignment:
| Q |
14 |
catagggtgtgggaggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtgg |
98 |
Q |
| |
|
|||| |||| ||||||||| || ||||| ||||| || |||||||||||||||||||| || || || ||||| || |||||||| |
|
|
| T |
24421328 |
catatggtgggggaggtgaaggagatggaggaggtggtgacttgtagacatatggaggaggaggagagggagatggaggtggtgg |
24421412 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 24470587 - 24470503
Alignment:
| Q |
14 |
catagggtgtgggaggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtgg |
98 |
Q |
| |
|
|||| |||| ||||||||| || ||||| ||||| || |||||||||||||||||||| || ||||| || || || |||||||| |
|
|
| T |
24470587 |
catatggtgggggaggtgaaggagatggaggaggtggtgacttgtagacatatggaggaggaggtgaaggggaaggaggtggtgg |
24470503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 24471114 - 24471042
Alignment:
| Q |
14 |
catagggtgtgggaggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggaga |
86 |
Q |
| |
|
||||||||| |||||||| || |||||||| |||||||| ||||| ||||||||||| || ||||| ||||| |
|
|
| T |
24471114 |
catagggtggaggaggtgaaggagatggtgggggaggagatttgtaaacatatggaggagggggtgaaggaga |
24471042 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 24477198 - 24477282
Alignment:
| Q |
14 |
catagggtgtgggaggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtgg |
98 |
Q |
| |
|
|||| |||| |||||| |||||||||||||||||| ||||||| || |||||||| || || ||||| | || ||||||||||| |
|
|
| T |
24477198 |
catacggtgggggaggagagggtgatggtggaggaagagacttatatacatatggtggagggggtgagtgtgacggtggtggtgg |
24477282 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 24420331 - 24420386
Alignment:
| Q |
25 |
ggaggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtga |
80 |
Q |
| |
|
|||||||| || ||||||||||| ||||||||||| | ||| |||||||||||||| |
|
|
| T |
24420331 |
ggaggtgatggagatggtggaggtggagacttgtaaatataaggaggcggtggtga |
24420386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 24420589 - 24420644
Alignment:
| Q |
43 |
ggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtgg |
98 |
Q |
| |
|
|||||||| ||||| |||||||||||||| |||||||| || || ||||||||||| |
|
|
| T |
24420589 |
ggaggaggggacttatagacatatggaggtggtggtgaaggggatggtggtggtgg |
24420644 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 24477671 - 24477726
Alignment:
| Q |
28 |
ggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatgg |
83 |
Q |
| |
|
|||||||| |||||||| ||||||||||| |||||||| || || ||||||||||| |
|
|
| T |
24477671 |
ggtgagggagatggtggtggaggagacttatagacataaggtggtggtggtgatgg |
24477726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 24420670 - 24420740
Alignment:
| Q |
28 |
ggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtgg |
98 |
Q |
| |
|
||||| || ||||||||||||||||| || || || |||||||| ||||| |||||||| ||||| ||||| |
|
|
| T |
24420670 |
ggtgaaggagatggtggaggaggagatttataaacgtatggaggtggtggggatggagacggtggaggtgg |
24420740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 24470813 - 24470743
Alignment:
| Q |
28 |
ggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtgg |
98 |
Q |
| |
|
||||| ||||||||||| || ||||| |||||||||||||| || ||||| ||||| || ||||| ||||| |
|
|
| T |
24470813 |
ggtgaaggtgatggtgggggtggagatttgtagacatatggtggtggtggagatggggatggtggaggtgg |
24470743 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 24420967 - 24421028
Alignment:
| Q |
37 |
gatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtgg |
98 |
Q |
| |
|
||||||||||| || ||||||||||||||||| || || || |||||||| || |||||||| |
|
|
| T |
24420967 |
gatggtggaggtggtgacttgtagacatatggtggagggggggatggagatgggggtggtgg |
24421028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 24470500 - 24470467
Alignment:
| Q |
170 |
acttgtaaacatagggtgggggaggtgagggtgt |
203 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |
|
|
| T |
24470500 |
acttgtaaacatagggcgggggaggtgagggtgt |
24470467 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 24482206 - 24482247
Alignment:
| Q |
58 |
tagacatatggaggcggtggtgatggagagggtggtggtgga |
99 |
Q |
| |
|
|||||||| ||||| |||||||||||||| |||||||||||| |
|
|
| T |
24482206 |
tagacataaggaggtggtggtgatggagatggtggtggtgga |
24482247 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 24420512 - 24420584
Alignment:
| Q |
14 |
catagggtgtgggaggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggaga |
86 |
Q |
| |
|
||||||||| || ||||| || |||||||| |||||||| ||||| ||||||||||| || ||||| ||||| |
|
|
| T |
24420512 |
catagggtggagggggtgaaggagatggtgggggaggagatttgtaaacatatggaggagggggtgaaggaga |
24420584 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 24421223 - 24421255
Alignment:
| Q |
170 |
acttgtaaacatagggtgggggaggtgagggtg |
202 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |
|
|
| T |
24421223 |
acttgtaaacataaggtgggggaggtgagggtg |
24421255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 24477074 - 24477150
Alignment:
| Q |
37 |
gatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtggactcttatagacata |
113 |
Q |
| |
|
|||||||| || ||||| ||||| ||||||||||| ||||| |||||||| || || ||||| |||||||||||| |
|
|
| T |
24477074 |
gatggtgggggtggagatttgtaaacatatggaggtggtggggatggagatggaggaggtggtgccttatagacata |
24477150 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 47; Significance: 5e-18; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 41900280 - 41900338
Alignment:
| Q |
37 |
gatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtgg |
95 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
41900280 |
gatggtggaggaggagacttgtagacatatggaggtggtggtgaaggagagggaggtgg |
41900338 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 41900089 - 41900146
Alignment:
| Q |
38 |
atggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtgg |
95 |
Q |
| |
|
||||||| |||||||| ||||| |||||||||||||||||||| |||||||| ||||| |
|
|
| T |
41900089 |
atggtggtggaggagatttgtaaacatatggaggcggtggtgaaggagagggaggtgg |
41900146 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 41899887 - 41899957
Alignment:
| Q |
28 |
ggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtgg |
98 |
Q |
| |
|
||||| ||||||||||| |||||||||||||| |||||||||| || ||||| || || || |||||||| |
|
|
| T |
41899887 |
ggtgaaggtgatggtgggggaggagacttgtacgcatatggaggagggggtgacggggaaggcggtggtgg |
41899957 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 41900472 - 41900530
Alignment:
| Q |
37 |
gatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtgg |
95 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||| |||||||||||||||| ||||| |
|
|
| T |
41900472 |
gatggtggaggaggagacttatagacatacttaggttgtggtgatggagagggaggtgg |
41900530 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 41900529 - 41900581
Alignment:
| Q |
46 |
ggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtgg |
98 |
Q |
| |
|
|||||||| |||||||||||||| || || ||||| |||||||| |||||||| |
|
|
| T |
41900529 |
ggaggagatttgtagacatatggcggaggaggtgaaggagagggaggtggtgg |
41900581 |
T |
 |
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Target: chr1 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 52821356 - 52821429
Alignment:
| Q |
25 |
ggaggtgagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtggtgg |
98 |
Q |
| |
|
||||||||||| || ||||| ||||| ||||||||| || ||||| || ||||| ||||||||||||||||| |
|
|
| T |
52821356 |
ggaggtgagggagagggtggtggaggtgacttgtagtagtaaggaggtggaggtgagggagagggtggtggtgg |
52821429 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 11902450 - 11902386
Alignment:
| Q |
31 |
gagggtgatggtggaggaggagacttgtagacatatggaggcggtggtgatggagagggtggtgg |
95 |
Q |
| |
|
|||||||| ||||| | |||||||||||| ||||||||| |||||||| ||||| |||||||| |
|
|
| T |
11902450 |
gagggtgaaggtggtgtgggagacttgtagtaatatggaggaggtggtgagggagatggtggtgg |
11902386 |
T |
 |
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