View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4283-Insertion-5 (Length: 136)
Name: NF4283-Insertion-5
Description: NF4283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4283-Insertion-5 |
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Alignment Details
Target: chr5 (Bit Score: 54; Significance: 2e-22; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17323537 - 17323610
Alignment:
| Q |
1 |
aatttaaatgggtataaattttaattttaagatgagtgaatggattgatattttgaatttcatgtatttcaatt |
74 |
Q |
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| T |
17323537 |
aatttaaatgggtataaattttaactttaagatgagtgactggtttgatatttcgaatttcatgtattttaatt |
17323610 |
T |
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Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 101 - 133
Target Start/End: Original strand, 17323751 - 17323783
Alignment:
| Q |
101 |
tgtaatattttaagttgatgttttggagatgag |
133 |
Q |
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| T |
17323751 |
tgtaatattttaagttgatgttttggagatgag |
17323783 |
T |
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