View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4283_high_14 (Length: 227)
Name: NF4283_high_14
Description: NF4283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4283_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 7 - 208
Target Start/End: Complemental strand, 30099332 - 30099131
Alignment:
| Q |
7 |
actttgaggcatcaaatgcattgtccctaatggcattcaaataatctctaagtttcactgaagaagtcagagtcctacacctcaagaataagtcagttag |
106 |
Q |
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| T |
30099332 |
actttgatgcatcaaatgcattgtccctaatggcattcaaacaatctctaagtttcaccgaagaagtcagagtcctacagctcaaaaataagtcaattag |
30099233 |
T |
|
| Q |
107 |
tttaagttatatataaagttgaaagttggaatgcacaagaaatcaacaatgtgttataatattggacttaaactaacatgctattgaaaacctatgaagt |
206 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||| |
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| T |
30099232 |
tttaagttatatataaagctgaaagttggaatgcacaagaaatcaacaatgtgctataatattgaacttaaactaatatgctattgaaaacctatgaagt |
30099133 |
T |
|
| Q |
207 |
at |
208 |
Q |
| |
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|| |
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| T |
30099132 |
at |
30099131 |
T |
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