View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4283_high_9 (Length: 319)

Name: NF4283_high_9
Description: NF4283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4283_high_9
NF4283_high_9
[»] chr4 (2 HSPs)
chr4 (1-172)||(36286008-36286179)
chr4 (212-304)||(40823903-40823995)
[»] chr7 (12 HSPs)
chr7 (215-301)||(20284848-20284934)
chr7 (212-301)||(20243512-20243601)
chr7 (212-301)||(20263906-20263995)
chr7 (213-301)||(20168155-20168243)
chr7 (215-301)||(20294565-20294651)
chr7 (212-289)||(20303594-20303671)
chr7 (213-301)||(20279416-20279504)
chr7 (222-301)||(20231457-20231536)
chr7 (212-301)||(20273711-20273800)
chr7 (212-304)||(20289156-20289248)
chr7 (210-289)||(19939009-19939088)
chr7 (210-289)||(19970148-19970227)
[»] chr8 (15 HSPs)
chr8 (190-253)||(19348300-19348363)
chr8 (190-253)||(19379366-19379429)
chr8 (190-253)||(19500631-19500694)
chr8 (190-255)||(19454361-19454426)
chr8 (192-255)||(19551618-19551681)
chr8 (192-255)||(19581007-19581070)
chr8 (190-255)||(15943112-15943177)
chr8 (190-255)||(19407341-19407406)
chr8 (192-253)||(19526650-19526711)
chr8 (190-253)||(19415420-19415483)
chr8 (190-255)||(16006438-16006503)
chr8 (210-255)||(19149273-19149318)
chr8 (185-255)||(15963795-15963865)
chr8 (190-255)||(19187197-19187262)
chr8 (192-241)||(19399065-19399114)
[»] chr2 (4 HSPs)
chr2 (193-286)||(2707396-2707489)
chr2 (214-286)||(2712642-2712714)
chr2 (193-301)||(2723773-2723881)
chr2 (193-301)||(2745603-2745711)
[»] chr6 (1 HSPs)
chr6 (172-241)||(16654243-16654312)


Alignment Details
Target: chr4 (Bit Score: 160; Significance: 3e-85; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 36286008 - 36286179
Alignment:
Q  1 cataaacttctgcatacagcaaagttgacttaaaaggtgatttagcagtaacataggaaatgaaacatgctaatgagtctttagtggttcagatattttt 100  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36286008 cataaacttctgcatatagcatagttgacttaaaaggtgatttagcagtaacataggaaatgaaacatgctaatgagtctttagtggttcagattttttt 36286107  T
Q  101 ctttattgtataatgttctcaccttgtcttacacatttttaagtcttaatttctttgaattatttgtgcaga 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36286108 ctttattgtataatgttctcaccttgtcttacacatttttaagtcttaatttctttgaattatttgtgcaga 36286179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 40823995 - 40823903
Alignment:
Q  212 taacataattgaaggaattgctcgaggattgctatatcttcacagagattatagattacgcattatacatagagatttaaaggcgagtaacat 304  Q
    |||||| || |||||||| |||||||||||||| |||||||| |||| ||  | |||  | |||||||| |||||| ||||| | ||||||||    
T  40823995 taacatcatagaaggaatagctcgaggattgctttatcttcatagagcttccaaattgagaattatacacagagatctaaagacaagtaacat 40823903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 301
Target Start/End: Original strand, 20284848 - 20284934
Alignment:
Q  215 cataattgaaggaattgctcgaggattgctatatcttcacagagattatagattacgcattatacatagagatttaaaggcgagtaa 301  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| |||| || | ||||| ||||||||||| ||||| |||||    
T  20284848 cataatcgaaggaatagctcgaggattgctatatcttcacagagattctagactaagaattattcatagagatttgaaggcaagtaa 20284934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 20243512 - 20243601
Alignment:
Q  212 taacataattgaaggaattgctcgaggattgctatatcttcacagagattatagattacgcattatacatagagatttaaaggcgagtaa 301  Q
    |||||| || ||||||||||||||||| |||||||||||||||||||||| |||  || | ||||| ||||||||||| ||||| |||||    
T  20243512 taacatcatagaaggaattgctcgagggttgctatatcttcacagagattctaggctaagaattattcatagagatttgaaggcaagtaa 20243601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 20263906 - 20263995
Alignment:
Q  212 taacataattgaaggaattgctcgaggattgctatatcttcacagagattatagattacgcattatacatagagatttaaaggcgagtaa 301  Q
    |||||| || ||||||||||||||||| |||||||||||||||||||||| |||  || | ||||| ||||||||||| ||||| |||||    
T  20263906 taacattatagaaggaattgctcgagggttgctatatcttcacagagattctaggctaagaattattcatagagatttgaaggcaagtaa 20263995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 20168243 - 20168155
Alignment:
Q  213 aacataattgaaggaattgctcgaggattgctatatcttcacagagattatagattacgcattatacatagagatttaaaggcgagtaa 301  Q
    |||||||| |||||||| ||||| |||||||||||||| ||||||||||  ||| || | ||||| ||||||||||| ||||| |||||    
T  20168243 aacataatagaaggaatagctcgtggattgctatatctccacagagattccagactaagaattattcatagagatttgaaggcaagtaa 20168155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 301
Target Start/End: Original strand, 20294565 - 20294651
Alignment:
Q  215 cataattgaaggaattgctcgaggattgctatatcttcacagagattatagattacgcattatacatagagatttaaaggcgagtaa 301  Q
    |||||| |||||||| |||||||||||||| ||||||||| |||||| |||  || | ||||| ||||||||||| ||||| |||||    
T  20294565 cataatagaaggaatagctcgaggattgctgtatcttcaccgagattctaggctaagaattattcatagagatttgaaggcaagtaa 20294651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 20303594 - 20303671
Alignment:
Q  212 taacataattgaaggaattgctcgaggattgctatatcttcacagagattatagattacgcattatacatagagattt 289  Q
    |||||| || ||||||||||||||||||||| | ||||||||||||||||  ||| || | |||||||| ||||||||    
T  20303594 taacattatagaaggaattgctcgaggattgttgtatcttcacagagattcgagactaagaattatacacagagattt 20303671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 20279416 - 20279504
Alignment:
Q  213 aacataattgaaggaattgctcgaggattgctatatcttcacagagattatagattacgcattatacatagagatttaaaggcgagtaa 301  Q
    |||||||  |||||||| ||||| |||||||||||||||||||||||||  ||| || | ||||| || |||||||| ||||| |||||    
T  20279416 aacataacagaaggaatagctcgcggattgctatatcttcacagagattccagactaagaattattcacagagatttgaaggcaagtaa 20279504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 20231457 - 20231536
Alignment:
Q  222 gaaggaattgctcgaggattgctatatcttcacagagattatagattacgcattatacatagagatttaaaggcgagtaa 301  Q
    ||||||||||||||||| ||| |||||||||||||||||| |||  || | ||||| ||||||| ||| ||||| |||||    
T  20231457 gaaggaattgctcgagggttgttatatcttcacagagattctaggctaagaattattcatagaggtttgaaggcaagtaa 20231536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 20273711 - 20273800
Alignment:
Q  212 taacataattgaaggaattgctcgaggattgctatatcttcacagagattatagattacgcattatacatagagatttaaaggcgagtaa 301  Q
    |||||| || |||||||| |||||||| ||| ||||||||||||||||||  ||  || | ||||| ||||||||||| ||||| |||||    
T  20273711 taacattatagaaggaatagctcgagggttgttatatcttcacagagattccaggctaagaattattcatagagatttgaaggcaagtaa 20273800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 20289156 - 20289248
Alignment:
Q  212 taacataattgaaggaattgctcgaggattgctatatcttcacagagattatagattacgcattatacatagagatttaaaggcgagtaacat 304  Q
    |||||| || || ||||| |||||||||||||| |||||||| |||||||  | |||  | |||||||| |||||||||||| | ||||||||    
T  20289156 taacattatagatggaatagctcgaggattgctttatcttcatagagattccaaattgagaattatacacagagatttaaagacaagtaacat 20289248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 19939009 - 19939088
Alignment:
Q  210 tttaacataattgaaggaattgctcgaggattgctatatcttcacagagattatagattacgcattatacatagagattt 289  Q
    |||| |||||| |||||||| |||||||||||| | ||||| ||||||||||  ||| ||   |||||||||||||||||    
T  19939009 tttagcataatagaaggaatagctcgaggattgttgtatctgcacagagattccagactaaaaattatacatagagattt 19939088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 19970148 - 19970227
Alignment:
Q  210 tttaacataattgaaggaattgctcgaggattgctatatcttcacagagattatagattacgcattatacatagagattt 289  Q
    |||| |||||| |||||||| |||||||||||| | ||||| ||||||||||  ||| ||   |||||||||||||||||    
T  19970148 tttagcataatagaaggaatagctcgaggattgttgtatctgcacagagattccagactaaaaattatacatagagattt 19970227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 19348300 - 19348363
Alignment:
Q  190 tgctagattggaaaaagcgttttaacataattgaaggaattgctcgaggattgctatatcttca 253  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  19348300 tgctagattggaagaagcgttttaacataatagaaggaattgctcaaggattgctctatcttca 19348363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 19379366 - 19379429
Alignment:
Q  190 tgctagattggaaaaagcgttttaacataattgaaggaattgctcgaggattgctatatcttca 253  Q
    ||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||| ||||||||    
T  19379366 tgctagattggaagaagcgtttcaacataatagaaggaattgctcaaggattgctctatcttca 19379429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 19500694 - 19500631
Alignment:
Q  190 tgctagattggaaaaagcgttttaacataattgaaggaattgctcgaggattgctatatcttca 253  Q
    ||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||| ||||||||    
T  19500694 tgctagattggaagaagcgtttcaacataatagaaggaattgctcaaggattgctctatcttca 19500631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 19454361 - 19454426
Alignment:
Q  190 tgctagattggaaaaagcgttttaacataattgaaggaattgctcgaggattgctatatcttcaca 255  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| |||||| || ||||||||||    
T  19454361 tgctagattggaaaaagcgtttcaacataatagaaggaatttctcaaggattactctatcttcaca 19454426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 255
Target Start/End: Complemental strand, 19551681 - 19551618
Alignment:
Q  192 ctagattggaaaaagcgttttaacataattgaaggaattgctcgaggattgctatatcttcaca 255  Q
    |||||||||||||||||||| |||||||| ||||||||| ||| |||||| || ||||||||||    
T  19551681 ctagattggaaaaagcgtttcaacataatagaaggaatttctcaaggattactctatcttcaca 19551618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 255
Target Start/End: Original strand, 19581007 - 19581070
Alignment:
Q  192 ctagattggaaaaagcgttttaacataattgaaggaattgctcgaggattgctatatcttcaca 255  Q
    |||||||||||||||||||| |||||||| ||||||||| ||| |||||| || ||||||||||    
T  19581007 ctagattggaaaaagcgtttcaacataatagaaggaatttctcaaggattactctatcttcaca 19581070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 15943112 - 15943177
Alignment:
Q  190 tgctagattggaaaaagcgttttaacataattgaaggaattgctcgaggattgctatatcttcaca 255  Q
    ||||||||||||| ||||| |||| |||||| |||||||| |||| |||||| |||||||||||||    
T  15943112 tgctagattggaataagcgctttagcataatcgaaggaatcgctcaaggattactatatcttcaca 15943177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 19407341 - 19407406
Alignment:
Q  190 tgctagattggaaaaagcgttttaacataattgaaggaattgctcgaggattgctatatcttcaca 255  Q
    |||||||||||||||||||||| ||| |||| ||||||||| ||| |||||| || ||||||||||    
T  19407341 tgctagattggaaaaagcgtttcaacgtaatagaaggaatttctcaaggattactctatcttcaca 19407406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 19526711 - 19526650
Alignment:
Q  192 ctagattggaaaaagcgttttaacataattgaaggaattgctcgaggattgctatatcttca 253  Q
    |||||||||||||||||||| |||||||| ||||||||| ||| |||||| || ||||||||    
T  19526711 ctagattggaaaaagcgtttcaacataatagaaggaatttctcaaggattactctatcttca 19526650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 19415420 - 19415483
Alignment:
Q  190 tgctagattggaaaaagcgttttaacataattgaaggaattgctcgaggattgctatatcttca 253  Q
    ||||||||||||| |||||||| |||||||| ||||||||| ||| |||||| || ||||||||    
T  19415420 tgctagattggaagaagcgtttcaacataatcgaaggaatttctcaaggattactctatcttca 19415483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 16006438 - 16006503
Alignment:
Q  190 tgctagattggaaaaagcgttttaacataattgaaggaattgctcgaggattgctatatcttcaca 255  Q
    ||||||||||||| || ||||||| |||||| ||||||||||||| |||||| || || |||||||    
T  16006438 tgctagattggaacaaacgttttagcataatagaaggaattgctcaaggattactttaccttcaca 16006503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 19149318 - 19149273
Alignment:
Q  210 tttaacataattgaaggaattgctcgaggattgctatatcttcaca 255  Q
    ||||||||||| ||||||||||||| |||||| |||||||||||||    
T  19149318 tttaacataatagaaggaattgctcaaggattactatatcttcaca 19149273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 15963865 - 15963795
Alignment:
Q  185 aaaaatgctagattggaaaaagcgttttaacataattgaaggaattgctcgaggattgctatatcttcaca 255  Q
    ||||||| |||||||||| || || |||| |||||| ||||||||||||| |||| | ||||| |||||||    
T  15963865 aaaaatgttagattggaacaaacgctttagcataatcgaaggaattgctcaaggactactataccttcaca 15963795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 19187197 - 19187262
Alignment:
Q  190 tgctagattggaaaaagcgttttaacataattgaaggaattgctcgaggattgctatatcttcaca 255  Q
    ||||||||||||| || || |||| |||||| ||||||||||||| |||| | ||||| |||||||    
T  19187197 tgctagattggaataaacgctttagcataatagaaggaattgctcaaggactactataccttcaca 19187262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 19399065 - 19399114
Alignment:
Q  192 ctagattggaaaaagcgttttaacataattgaaggaattgctcgaggatt 241  Q
    ||||||||||| |||||||| |||||||| ||||||||| ||| ||||||    
T  19399065 ctagattggaagaagcgtttcaacataatagaaggaatttctcaaggatt 19399114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 286
Target Start/End: Complemental strand, 2707489 - 2707396
Alignment:
Q  193 tagattggaaaaagcgttttaacataattgaaggaattgctcgaggattgctatatcttcacagagattatagattacgcattatacatagaga 286  Q
    ||||||||||||| ||||| | |||||||||||||||  |||||||  |||| |||||||| |||||||  |||||| | || |||||||||||    
T  2707489 tagattggaaaaaacgtttaaccataattgaaggaatctctcgaggtctgctttatcttcatagagattcaagattaagaataatacatagaga 2707396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 286
Target Start/End: Complemental strand, 2712714 - 2712642
Alignment:
Q  214 acataattgaaggaattgctcgaggattgctatatcttcacagagattatagattacgcattatacatagaga 286  Q
    |||||||||| |||||  ||||||||||||| ||||||||  ||||||  |||||| | || |||||||||||    
T  2712714 acataattgagggaatctctcgaggattgctttatcttcatcgagattcaagattaagaataatacatagaga 2712642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 301
Target Start/End: Complemental strand, 2723881 - 2723773
Alignment:
Q  193 tagattggaaaaagcgttttaacataattgaaggaattgctcgaggattgctatatcttcacagagattatagattacgcattatacatagagatttaaa 292  Q
    |||||||| |||| || ||  |||||||||| |||||  |||| ||| |||| |||||||| |||||||  |||||| | || |||||||||||  ||||    
T  2723881 tagattggcaaaaacgcttatacataattgagggaatctctcgcggactgctttatcttcatagagattcgagattaagaataatacatagagacctaaa 2723782  T
Q  293 ggcgagtaa 301  Q
    | |||||||    
T  2723781 gccgagtaa 2723773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 301
Target Start/End: Complemental strand, 2745711 - 2745603
Alignment:
Q  193 tagattggaaaaagcgttttaacataattgaaggaattgctcgaggattgctatatcttcacagagattatagattacgcattatacatagagatttaaa 292  Q
    |||||||| |||| || ||  |||||||||| |||||  |||| ||| |||| |||||||| |||||||  |||||| | || |||||||||||  ||||    
T  2745711 tagattggcaaaaacgcttatacataattgagggaatctctcgcggactgctttatcttcatagagattcgagattaagaataatacatagagacctaaa 2745612  T
Q  293 ggcgagtaa 301  Q
    | |||||||    
T  2745611 gccgagtaa 2745603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 16654243 - 16654312
Alignment:
Q  172 atccatataaacaaaaaatgctagattggaaaaagcgttttaacataattgaaggaattgctcgaggatt 241  Q
    |||||| ||||||| | |||  ||||||| || || ||||||||||| ||||||||||||||||| ||||    
T  16654243 atccatttaaacaacagatgtaagattgggaatagtgttttaacatagttgaaggaattgctcgaagatt 16654312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University