View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4283_low_10 (Length: 353)

Name: NF4283_low_10
Description: NF4283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4283_low_10
NF4283_low_10
[»] chr1 (28 HSPs)
chr1 (1-337)||(19058588-19058924)
chr1 (1-75)||(38078655-38078729)
chr1 (1-75)||(46348377-46348451)
chr1 (1-68)||(113290-113357)
chr1 (1-71)||(16927183-16927253)
chr1 (1-75)||(22881610-22881684)
chr1 (9-67)||(23738677-23738735)
chr1 (9-75)||(40258927-40258993)
chr1 (3-68)||(5376501-5376566)
chr1 (10-75)||(22515881-22515946)
chr1 (10-74)||(18190103-18190167)
chr1 (1-61)||(48450595-48450655)
chr1 (1-68)||(1486710-1486777)
chr1 (1-68)||(6612172-6612239)
chr1 (16-71)||(11605933-11605988)
chr1 (1-68)||(18556457-18556524)
chr1 (1-68)||(47989489-47989555)
chr1 (9-75)||(51410023-51410090)
chr1 (1-75)||(1815248-1815322)
chr1 (3-77)||(13436451-13436525)
chr1 (9-67)||(21378577-21378635)
chr1 (10-68)||(24577187-24577245)
chr1 (10-68)||(28273089-28273147)
chr1 (9-75)||(31672889-31672955)
chr1 (9-65)||(13011219-13011276)
chr1 (10-66)||(52284702-52284759)
chr1 (1-73)||(42359445-42359517)
chr1 (1-73)||(50607790-50607862)
[»] chr8 (18 HSPs)
chr8 (1-68)||(22595985-22596052)
chr8 (1-63)||(41838129-41838191)
chr8 (1-76)||(22204630-22204707)
chr8 (2-68)||(2572057-2572123)
chr8 (10-68)||(21465412-21465470)
chr8 (10-68)||(25566841-25566899)
chr8 (1-75)||(31556988-31557061)
chr8 (1-75)||(36450748-36450822)
chr8 (38-75)||(9414869-9414906)
chr8 (9-61)||(18407718-18407770)
chr8 (1-68)||(22651967-22652034)
chr8 (17-75)||(4948659-4948717)
chr8 (1-75)||(20873060-20873134)
chr8 (9-75)||(24613520-24613585)
chr8 (1-67)||(29510306-29510372)
chr8 (3-71)||(4298884-4298952)
chr8 (11-67)||(7442846-7442902)
chr8 (4-68)||(14634142-14634206)
[»] chr7 (14 HSPs)
chr7 (1-75)||(25481893-25481967)
chr7 (1-74)||(7197292-7197365)
chr7 (1-68)||(24339633-24339700)
chr7 (9-79)||(11061066-11061136)
chr7 (1-75)||(33994203-33994277)
chr7 (9-61)||(13770690-13770742)
chr7 (13-68)||(5409837-5409892)
chr7 (17-68)||(7058433-7058484)
chr7 (9-75)||(8234145-8234211)
chr7 (1-75)||(15680800-15680874)
chr7 (1-54)||(5235977-5236030)
chr7 (9-69)||(7438705-7438765)
chr7 (10-75)||(21864806-21864873)
chr7 (1-61)||(24105669-24105729)
[»] chr4 (20 HSPs)
chr4 (1-63)||(11651140-11651202)
chr4 (1-75)||(23292980-23293054)
chr4 (9-68)||(715608-715668)
chr4 (9-68)||(752934-752994)
chr4 (9-73)||(21945502-21945566)
chr4 (1-68)||(30298937-30299005)
chr4 (1-68)||(30327805-30327873)
chr4 (1-68)||(19482659-19482726)
chr4 (1-75)||(49431016-49431091)
chr4 (1-61)||(27706185-27706245)
chr4 (9-61)||(38847020-38847072)
chr4 (2-76)||(42640518-42640595)
chr4 (9-75)||(2361969-2362035)
chr4 (10-68)||(51701258-51701316)
chr4 (10-75)||(4157150-4157214)
chr4 (15-68)||(11596353-11596406)
chr4 (10-75)||(28964242-28964307)
chr4 (10-75)||(54580017-54580082)
chr4 (9-61)||(3947774-3947826)
chr4 (11-67)||(29205445-29205501)
[»] chr3 (32 HSPs)
chr3 (1-77)||(16000008-16000084)
chr3 (1-66)||(4987294-4987359)
chr3 (1-61)||(14216883-14216943)
chr3 (1-61)||(14223012-14223072)
chr3 (1-76)||(8383248-8383323)
chr3 (1-68)||(15796295-15796362)
chr3 (1-68)||(28917992-28918059)
chr3 (1-75)||(10954943-10955017)
chr3 (18-68)||(16789020-16789070)
chr3 (1-75)||(26492199-26492273)
chr3 (1-74)||(10268481-10268554)
chr3 (1-66)||(26508101-26508166)
chr3 (4-68)||(3164026-3164090)
chr3 (10-74)||(51206348-51206412)
chr3 (1-68)||(750619-750686)
chr3 (2-61)||(14209105-14209164)
chr3 (1-68)||(21479109-21479176)
chr3 (1-68)||(34185124-34185191)
chr3 (9-95)||(35994712-35994797)
chr3 (10-68)||(1509539-1509597)
chr3 (9-75)||(7171501-7171566)
chr3 (1-67)||(20503456-20503522)
chr3 (2-48)||(23870580-23870626)
chr3 (2-68)||(34910309-34910375)
chr3 (9-67)||(55212962-55213020)
chr3 (9-75)||(55401074-55401140)
chr3 (18-74)||(15505785-15505842)
chr3 (1-76)||(32400701-32400773)
chr3 (1-61)||(3610624-3610684)
chr3 (1-73)||(8587017-8587089)
chr3 (1-61)||(11610512-11610572)
chr3 (16-68)||(25948888-25948940)
[»] chr2 (27 HSPs)
chr2 (1-65)||(24894380-24894444)
chr2 (1-68)||(20539675-20539742)
chr2 (1-76)||(21624257-21624333)
chr2 (10-75)||(2438713-2438778)
chr2 (1-74)||(38117154-38117227)
chr2 (10-69)||(11223863-11223922)
chr2 (1-68)||(18421954-18422021)
chr2 (1-75)||(19536391-19536466)
chr2 (1-68)||(36756345-36756412)
chr2 (1-75)||(18841007-18841081)
chr2 (9-75)||(20473321-20473387)
chr2 (3-61)||(21374707-21374765)
chr2 (1-61)||(4882704-4882764)
chr2 (1-57)||(12940947-12941003)
chr2 (9-68)||(14996224-14996284)
chr2 (10-101)||(18255945-18256039)
chr2 (9-73)||(21091722-21091786)
chr2 (9-68)||(974746-974805)
chr2 (1-68)||(37558968-37559035)
chr2 (1-75)||(6940246-6940320)
chr2 (1-75)||(15972864-15972938)
chr2 (1-75)||(30404844-30404918)
chr2 (1-54)||(16069269-16069322)
chr2 (10-67)||(29176495-29176552)
chr2 (9-61)||(30717538-30717590)
chr2 (1-61)||(33153415-33153475)
chr2 (5-61)||(39323259-39323315)
[»] chr5 (21 HSPs)
chr5 (9-68)||(21542029-21542088)
chr5 (1-68)||(21522741-21522808)
chr5 (1-68)||(21533307-21533374)
chr5 (1-75)||(6247613-6247687)
chr5 (9-74)||(21191051-21191116)
chr5 (1-74)||(33178016-33178089)
chr5 (9-74)||(42893359-42893424)
chr5 (1-66)||(43001791-43001856)
chr5 (2-61)||(7218275-7218334)
chr5 (9-68)||(7677704-7677763)
chr5 (1-68)||(8420018-8420085)
chr5 (1-68)||(15382468-15382537)
chr5 (3-68)||(13287400-13287465)
chr5 (1-61)||(14674260-14674320)
chr5 (11-75)||(21576739-21576803)
chr5 (1-61)||(31084314-31084374)
chr5 (1-61)||(39698532-39698592)
chr5 (9-75)||(15883986-15884053)
chr5 (9-68)||(19579700-19579759)
chr5 (1-72)||(4105248-4105321)
chr5 (1-61)||(24906309-24906369)
[»] chr6 (31 HSPs)
chr6 (1-74)||(7977825-7977898)
chr6 (1-68)||(16766688-16766755)
chr6 (1-75)||(8776967-8777041)
chr6 (1-75)||(34595125-34595199)
chr6 (1-74)||(7938107-7938180)
chr6 (1-61)||(12696315-12696375)
chr6 (1-68)||(853860-853927)
chr6 (1-75)||(24645471-24645546)
chr6 (7-57)||(2224223-2224273)
chr6 (2-68)||(5970109-5970175)
chr6 (1-75)||(16833299-16833373)
chr6 (5-67)||(17435194-17435256)
chr6 (1-75)||(17841583-17841657)
chr6 (1-75)||(28152090-28152163)
chr6 (3-68)||(9107371-9107436)
chr6 (2-75)||(23771571-23771643)
chr6 (1-75)||(27904030-27904106)
chr6 (10-75)||(28715295-28715360)
chr6 (1-68)||(3398610-3398676)
chr6 (1-68)||(8365520-8365587)
chr6 (2-68)||(8713971-8714038)
chr6 (1-68)||(10770675-10770742)
chr6 (4-75)||(24614404-24614475)
chr6 (1-75)||(426508-426582)
chr6 (17-67)||(9522898-9522948)
chr6 (11-68)||(9911529-9911587)
chr6 (10-68)||(32511667-32511725)
chr6 (2-75)||(32978893-32978967)
chr6 (3-68)||(7801157-7801222)
chr6 (3-68)||(15489733-15489798)
chr6 (1-61)||(31959150-31959210)
[»] scaffold0103 (1 HSPs)
scaffold0103 (1-75)||(51802-51879)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-75)||(8789-8863)
[»] scaffold0050 (1 HSPs)
scaffold0050 (2-75)||(70270-70343)
[»] scaffold0793 (1 HSPs)
scaffold0793 (9-68)||(4884-4944)
[»] scaffold0223 (1 HSPs)
scaffold0223 (1-61)||(20163-20223)
[»] scaffold0066 (1 HSPs)
scaffold0066 (2-57)||(33375-33430)
[»] scaffold0049 (1 HSPs)
scaffold0049 (11-74)||(63774-63837)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-102)||(46673-46776)
[»] scaffold0722 (1 HSPs)
scaffold0722 (5-74)||(7027-7096)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-68)||(123616-123686)
scaffold0004 (1-61)||(92798-92858)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-68)||(13391-13458)
[»] scaffold0152 (1 HSPs)
scaffold0152 (1-68)||(21869-21936)
[»] scaffold0652 (1 HSPs)
scaffold0652 (9-75)||(456-522)
[»] scaffold0361 (1 HSPs)
scaffold0361 (2-60)||(14522-14580)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-61)||(178826-178887)
[»] scaffold0136 (1 HSPs)
scaffold0136 (9-61)||(3857-3909)


Alignment Details
Target: chr1 (Bit Score: 317; Significance: 1e-179; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 1 - 337
Target Start/End: Complemental strand, 19058924 - 19058588
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacgtatccaaggagtgtccgtgcatcat 100  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  19058924 tgacacgccgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcggacacgtatccaaggagtgtccgtgcatcat 19058825  T
Q  101 agagaaaacctcattatttgactcttactcagtagctccataagcctccaaattctccccagtgagtctgcaaagcctccattcctgcaaaatcttagca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19058824 agagaaaacctcattatttgactcttactcagtagctccataagcctccaaattctccccagtgagtctgcaaagcctccattcctgcaaaatcttagca 19058725  T
Q  201 cccatatcttcataaaatttgatagcattaacattccaatcaagaacaacccattcaactcttccatatcccattttcacagcttgtttcgcaacagcag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19058724 cccatatcttcataaaatttgatagcattaacattccaatcaagaacaacccattcaactcttccatatcccattttcacagcttgtttcgcaacagcag 19058625  T
Q  301 taagtaacatcttcccaaatcctttccttctataaca 337  Q
    |||||||||||||||||||||||||||||||||||||    
T  19058624 taagtaacatcttcccaaatcctttccttctataaca 19058588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 38078729 - 38078655
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    |||||||||||||||||||||||||| |||| || | |||||||| || |||||||||||| |||||| ||||||    
T  38078729 tgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacacg 38078655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 46348451 - 46348377
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| |||||||||||||||||| |||| || |||||||| |||| |||||||||||| |||||| ||||||    
T  46348451 tgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcggacacg 46348377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 113290 - 113357
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| |||||||||||||||||| |||| || | ||||||||||| |||||||||||| ||||||    
T  113290 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtc 113357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16927253 - 16927183
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcaga 71  Q
    |||||||||| || |||||||||||| |||| || ||||||||||||| ||||| |  |||||||||||||    
T  16927253 tgacacgtcggcatagctaataatttgaaaaaatcatataattcagtgtaattatatatgttggtgtcaga 16927183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 22881684 - 22881610
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| ||||||| |||||||||| |||| || | |||||| |||| |||||||||||| |||||| ||||||    
T  22881684 tgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacg 22881610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 23738677 - 23738735
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgt 67  Q
    |||||||||||||||||| |||| || | ||||||||||||||||| | ||||||||||    
T  23738677 cgacacagctaataatttgaaaaaatcacataattcagtgcaattaaatgtgttggtgt 23738735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 40258993 - 40258927
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    |||||||  ||||||||| |||| || | ||||||||||| |||||||||||| |||||||||||||    
T  40258993 cgacacaattaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcagacacg 40258927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 5376566 - 5376501
Alignment:
Q  3 acacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||| |||||| ||||||||||||| || |||| ||||||||||| ||||| |||||| ||||||    
T  5376566 acacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtc 5376501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 22515946 - 22515881
Alignment:
Q  10 gacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||||||||||||| |||| || | |||||| |||| |||||||||||| |||||| ||||||    
T  22515946 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacg 22515881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 18190167 - 18190103
Alignment:
Q  10 gacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacac 74  Q
    |||||| |||||||||| |||| || | ||||||||||| |||||||||||| | ||||||||||    
T  18190167 gacacacctaataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtcagacac 18190103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 48450655 - 48450595
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    ||||||| | |||||||||||||||| |||| |||| |||||| |||| ||||||||||||    
T  48450655 tgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgt 48450595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1486777 - 1486710
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    |||||||  ||||||||||||||||| |||| || | ||||||||||| ||||| |||||| ||||||    
T  1486777 tgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtc 1486710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6612239 - 6612172
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| ||| |||| ||||||||| |||| || | ||||||||||| |||||||||||| ||||||    
T  6612239 tgacacgccgatacagttaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtc 6612172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 11605988 - 11605933
Alignment:
Q  16 gctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcaga 71  Q
    ||||||||||| |||| || ||||||||||||| ||||||| |||||||| |||||    
T  11605988 gctaataatttgaaaaaatcatataattcagtgaaattacatgtgttggtatcaga 11605933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 18556524 - 18556457
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| |||||||||||||||||| |||| || | |||||| | || |||||||||| ||||||||    
T  18556524 tgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattacaagtattggtgtc 18556457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 47989489 - 47989555
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| |||||||  |||||||||||||| || | ||||||||||| |||||||||||| ||||||    
T  47989489 tgacacgccgacacaa-taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 47989555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 51410023 - 51410090
Alignment:
Q  9 cgacacagctaataattt-aaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| |||||||||| ||||| || | ||||||||||| |||||||||||| |||||| ||||||    
T  51410023 cgacacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 51410090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 1815248 - 1815322
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| |||||||  |||| |||| |||| || | ||||||||||| |||||||||||| |||||| ||||||    
T  1815248 tgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgtcggtgtccgacacg 1815322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 13436451 - 13436525
Alignment:
Q  3 acacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacgta 77  Q
    ||||| |||||| |||||||||||||  | || | ||||||||||| ||||| | ||||||||||| ||||||||    
T  13436451 acacgccgacactgctaataatttaaggaaatcacataattcagtgtaattatatgtgttggtgtcggacacgta 13436525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 21378577 - 21378635
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgt 67  Q
    ||||||||||||||| || |||| || | ||||||||||| |||||||||||| |||||    
T  21378577 cgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcggtgt 21378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 24577245 - 24577187
Alignment:
Q  10 gacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    |||||| |||||||||| |||| || | ||||||||||| |||||||||||| ||||||    
T  24577245 gacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 24577187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 28273147 - 28273089
Alignment:
Q  10 gacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    |||||| ||||| |||| |||| || ||||||||||||| |||||||||||| ||||||    
T  28273147 gacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcggtgtc 28273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 31672955 - 31672889
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    |||||||||||||||||| |||| || |  |||||||||| |||||||||| | |||||| ||||||    
T  31672955 cgacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagtctcggtgtcggacacg 31672889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 13011276 - 13011219
Alignment:
Q  9 cgacacagctaataattt-aaaaagataatataattcagtgcaattacaagtgttggt 65  Q
    |||||||||||||||||| ||||| || | |||||| |||| ||||||||||||||||    
T  13011276 cgacacagctaataatttgaaaaaaatcacataattaagtgtaattacaagtgttggt 13011219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 52284702 - 52284759
Alignment:
Q  10 gacacagctaataattt-aaaaagataatataattcagtgcaattacaagtgttggtg 66  Q
    ||||||||||||||||| ||||| | |||||||||||||  |||||||||||| ||||    
T  52284702 gacacagctaataatttaaaaaaaaaaatataattcagtataattacaagtgtcggtg 52284759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 42359517 - 42359445
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagaca 73  Q
    |||||||  |||||| |||||||||| |||| || | | ||||||||| |||||||||||| |||||| ||||    
T  42359517 tgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggaca 42359445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 50607790 - 50607862
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagaca 73  Q
    |||||||||||||| | ||||||||| | ||||||| ||| |||| |||||| ||| || || ||||||||||    
T  50607790 tgacacgtcgacaccgttaataatttgataagataacatatttcaatgcaatcacatgtattagtgtcagaca 50607862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 9e-21; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22595985 - 22596052
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| ||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  22595985 tgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgttggtgtc 22596052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 41838191 - 41838129
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttg 63  Q
    ||||||||||||||||||||||||||||||| || | |||||||||||||| |||||||||||    
T  41838191 tgacacgtcgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgttg 41838129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 22204630 - 22204707
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaag-ata-atataattcagtgcaattacaagtgttggtgtcagacacgt 76  Q
    ||||||| ||||||| |||||||||||||||  ||| ||||||||||||| ||||||||||||  |||||||||||||    
T  22204630 tgacacgccgacacaactaataatttaaaaaatatatatataattcagtgtaattacaagtgtcagtgtcagacacgt 22204707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 2572123 - 2572057
Alignment:
Q  2 gacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    |||||||||||||| |||||||||| |||| || | |||||| |||| |||||||||||| ||||||    
T  2572123 gacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 2572057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 21465412 - 21465470
Alignment:
Q  10 gacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||||||||||||| |||| || |||||||||  || |||||||||||||||||||    
T  21465412 gacacagctaataatttgaaaaaatcatataattcgatgtaattacaagtgttggtgtc 21465470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 25566841 - 25566899
Alignment:
Q  10 gacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||||||||||||| |||| || | ||||||||||| |||||||||||| ||||||    
T  25566841 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 25566899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 31556988 - 31557061
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| |||||||| ||||||||| |||| || | ||||||||||| |||||||||| | |||||||||||||    
T  31556988 tgacacgccgacacagttaataatttgaaaa-atcacataattcagtgtaattacaagtttcggtgtcagacacg 31557061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 36450822 - 36450748
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| ||||||| |||||||||| |||| || | | ||||||||| |||||||||||| |||||| ||||||    
T  36450822 tgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcggacacg 36450748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 9414906 - 9414869
Alignment:
Q  38 ataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  9414906 ataattcagtgcaattataagtgttggtgtcagacacg 9414869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 18407718 - 18407770
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    ||||||||||||||||| ||||| || | ||||||||||| ||||||||||||    
T  18407718 cgacacagctaataattcaaaaaaatcacataattcagtgtaattacaagtgt 18407770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22651967 - 22652034
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| |||||||||||||||||| |||| || | |||||||| |  |||||||||||| ||||||    
T  22651967 tgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtc 22652034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 4948659 - 4948717
Alignment:
Q  17 ctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    |||||||||| |||| || | ||||||||||| |||||||||||| |||||| ||||||    
T  4948659 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 4948717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 20873060 - 20873134
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| ||||| || ||||||||| |||| || | |||||| |||| |||||||||||| |||||| ||||||    
T  20873060 tgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacg 20873134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 24613520 - 24613585
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    |||||||||||||||||| |||| || | |||||| |||| |||||||||||| |||||| ||||||    
T  24613520 cgacacagctaataatttgaaaa-atcacataattaagtgtaattacaagtgtcggtgtcggacacg 24613585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 29510372 - 29510306
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgt 67  Q
    ||||||| |||||||||||||||||| |||| || | | ||||||||  |||||||||||| |||||    
T  29510372 tgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgt 29510306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 4298952 - 4298884
Alignment:
Q  3 acacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcaga 71  Q
    ||||| |||||||| ||||||||| |||| || | |||||| | || |||||||||||| |||||||||    
T  4298952 acacgccgacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgtcggtgtcaga 4298884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 7442846 - 7442902
Alignment:
Q  11 acacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgt 67  Q
    |||| ||||||||||| | || || | ||||||||||| ||||||||||||||||||    
T  7442846 acaccgctaataatttcataaaattacataattcagtgtaattacaagtgttggtgt 7442902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 14634206 - 14634142
Alignment:
Q  4 cacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||||||| ||||| ||||||| || || ||||||||||||| ||||| |  ||||||||||    
T  14634206 cacgtcgacaccgctaacaatttaagaaaattatataattcagtgtaattatatttgttggtgtc 14634142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 9e-18; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 25481893 - 25481967
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| |||||||||||||||||| |||| || | ||||||||||| ||||||||||||||||||| ||||||    
T  25481893 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcggacacg 25481967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7197365 - 7197292
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacac 74  Q
    ||||||| ||||||||||||||||||||||| || || ||||||| || |||||||||||| |||||| |||||    
T  7197365 tgacacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtcggacac 7197292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 24339633 - 24339700
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| |||||||||||||||||| |||| || | ||||||||||| |||||||||||| ||||||    
T  24339633 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 24339700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 11061136 - 11061066
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacgtatc 79  Q
    |||||||||||||||||| |||| || | |||||| |||  |||||||||||| |||||||||||||||||    
T  11061136 cgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcggtgtcagacacgtatc 11061066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 33994203 - 33994277
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| |||| || ||| |||||| ||||| | | |||||||||||||||||||||||| |||||||||||||    
T  33994203 tgacacgccgacgcaactactaatttgaaaaggtcacataattcagtgcaattacaagtgtcggtgtcagacacg 33994277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 13770690 - 13770742
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    ||||||||||||||||||||||| || | ||||||||||| ||||||||||||    
T  13770690 cgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgt 13770742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 5409892 - 5409837
Alignment:
Q  13 acagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    |||||||||||||| |||| || | |||||||||||||||||||||||| ||||||    
T  5409892 acagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtc 5409837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 7058433 - 7058484
Alignment:
Q  17 ctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    |||||||||| |||| || || |||||||||| |||||||||||||||||||    
T  7058433 ctaataatttgaaaaaatcatgtaattcagtgtaattacaagtgttggtgtc 7058484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 8234145 - 8234211
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| |||||||||| |||| |||| ||||||||||| | |||||||||  |||||| ||||||    
T  8234145 cgacacaactaataatttgaaaaaataacataattcagtgtagttacaagtgccggtgtcggacacg 8234211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 15680800 - 15680874
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| ||||| ||||||||||| ||||| || | |||||| |||| ||||| |||||| |||||| ||||||    
T  15680800 tgacacgccgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacg 15680874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5235977 - 5236030
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaatta 54  Q
    |||||||||||||| ||||||||||||| || || |||||||| |||| |||||    
T  5235977 tgacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaatta 5236030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 7438705 - 7438765
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtca 69  Q
    |||||||| ||||||||| |||| || | |||||||| || |||||||||||| |||||||    
T  7438705 cgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtca 7438765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 21864806 - 21864873
Alignment:
Q  10 gacacagctaataattt--aaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    |||||||||||||||||  ||||| || |||||||| |||| |||||||||||| | |||| ||||||    
T  21864806 gacacagctaataatttgaaaaaaaatcatataatttagtgtaattacaagtgtcgctgtcggacacg 21864873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24105669 - 24105729
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    ||||||| |||||||||||||||||| |||| ||   || |||||||| ||||||||||||    
T  24105669 tgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgt 24105729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 9e-18; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 11651202 - 11651140
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttg 63  Q
    ||||||||||||||||||||||||||||||| || | |||||||||||||| |||||||||||    
T  11651202 tgacacgtcgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgttg 11651140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 23293054 - 23292980
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| |||||||||||||||||| |||| || | ||||||||||  |||||||||||| |||||| ||||||    
T  23293054 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggacacg 23292980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 715668 - 715608
Alignment:
Q  9 cgacacagctaataatttaaaaaga-taatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||||||||||||||||||| | | | ||||||||||| |||||||||||||||||||    
T  715668 cgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtc 715608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 752994 - 752934
Alignment:
Q  9 cgacacagctaataatttaaaaaga-taatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||||||||||||||||||| | | | ||||||||||| |||||||||||||||||||    
T  752994 cgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtc 752934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 21945502 - 21945566
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagaca 73  Q
    |||||||||||||||||| |||| || | ||||||||||| |||||||||||| |||||| ||||    
T  21945502 cgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggaca 21945566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30298937 - 30299005
Alignment:
Q  1 tgacacgtcgacacagctaataattt-aaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| |||||||||||||||||| ||||| || | ||||||||||| |||||||||||| ||||||    
T  30298937 tgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtc 30299005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30327805 - 30327873
Alignment:
Q  1 tgacacgtcgacacagctaataattt-aaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| |||||||||||||||||| ||||| || | ||||||||||| |||||||||||| ||||||    
T  30327805 tgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtc 30327873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19482659 - 19482726
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| ||||||| |||||||||| |||| || | ||||||| ||| |||||||||||||||||||    
T  19482659 tgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtc 19482726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 49431016 - 49431091
Alignment:
Q  1 tgacacgtcgacacagctaataattt-aaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| |||||||||||||||||| ||||| || | ||||||||||| ||||| |||||| |||||| ||||||    
T  49431016 tgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtcggacacg 49431091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27706245 - 27706185
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    |||||||||||||||  |||||||||||||| || | |||||| |||| ||||||||||||    
T  27706245 tgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaattacaagtgt 27706185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 38847072 - 38847020
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    |||||||||||||||||| |||| || |||| |||||||| ||||||||||||    
T  38847072 cgacacagctaataatttgaaaaaatcatattattcagtgtaattacaagtgt 38847020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 42640518 - 42640595
Alignment:
Q  2 gacacgtcgacacagctaataatttaaaaagataat---ataattcagtgcaattacaagtgttggtgtcagacacgt 76  Q
    |||||| |||||||||| ||||||| |||| | |||   ||||||||||| |||||||||||| |||||| |||||||    
T  42640518 gacacgccgacacagctgataatttgaaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgt 42640595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 2362035 - 2361969
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    |||||||||||||||||| |||| || | |||||| |||| ||||| |||||| |||||| ||||||    
T  2362035 cgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtcggacacg 2361969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 51701258 - 51701316
Alignment:
Q  10 gacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||||||||||||| |||| || | |||||| |||| ||||||||||||| |||||    
T  51701258 gacacagctaataatttgaaaaaattacataattgagtgtaattacaagtgttagtgtc 51701316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 4157150 - 4157214
Alignment:
Q  10 gacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    |||||| |||||||||| |||| || | |||||| ||||||||||||||||| |||||| ||||||    
T  4157150 gacacaactaataatttgaaaa-atcacataatttagtgcaattacaagtgtcggtgtcggacacg 4157214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 11596406 - 11596353
Alignment:
Q  15 agctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    |||||||||||| |||| || | ||||||||||| |||||||||||| ||||||    
T  11596406 agctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtc 11596353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 28964307 - 28964242
Alignment:
Q  10 gacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    |||| |||||||||||| |||| || | ||||||||||| ||||||||||||  ||||| ||||||    
T  28964307 gacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtctgtgtcggacacg 28964242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 54580082 - 54580017
Alignment:
Q  10 gacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    |||||| |||||||||| |||| || | ||||||||||| ||||| |||||| |||||| ||||||    
T  54580082 gacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggacacg 54580017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 3947826 - 3947774
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    |||||||||||||||||| |||| ||   ||||||||||| ||||||||||||    
T  3947826 cgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgt 3947774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 29205445 - 29205501
Alignment:
Q  11 acacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgt 67  Q
    |||| ||||||||||| |||| || | ||||||||||| |||||||||||| |||||    
T  29205445 acacggctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 29205501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 16000084 - 16000008
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacgta 77  Q
    ||||||| ||||||| ||||||||||||||| |||| ||||||||||| || ||||||||| |||||| ||||||||    
T  16000084 tgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcggtgtcggacacgta 16000008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4987359 - 4987294
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtg 66  Q
    ||||||| |||||||||||||||||| |||| || | ||||||||||| |||||||||||||||||    
T  4987359 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtg 4987294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14216883 - 14216943
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    ||||||||||||||| |||||||||| |||| || ||||||||||||| ||||||||||||    
T  14216883 tgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgt 14216943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14223012 - 14223072
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    ||||||||||||||| |||||||||| |||| || ||||||||||||| ||||||||||||    
T  14223012 tgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgt 14223072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8383248 - 8383323
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacgt 76  Q
    ||||||| |||||| ||||||||||| | || || ||||||||||||| ||||| |||||| |||||| |||||||    
T  8383248 tgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcggacacgt 8383323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15796362 - 15796295
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| |||||||| ||||||||| |||| || ||||||||||||| |||||||| ||| ||||||    
T  15796362 tgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtc 15796295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 28917992 - 28918059
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| ||||| |||||||||||| |||| || | ||||||||||| |||||||||||| ||||||    
T  28917992 tgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 28918059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 10954943 - 10955017
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| ||||||| |||||||||| |||| || | ||||||||||| ||| |||||||| |||||| ||||||    
T  10954943 tgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcggacacg 10955017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 16789020 - 16789070
Alignment:
Q  18 taataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    |||||||||||||| || ||||||||||||| ||||| |||||||||||||    
T  16789020 taataatttaaaaaaatcatataattcagtgtaattataagtgttggtgtc 16789070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 26492273 - 26492199
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| ||||| |||||||||||| |||| || ||| ||||||||| |||||||||| | |||||| ||||||    
T  26492273 tgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtcggacacg 26492199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 10268554 - 10268481
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacac 74  Q
    ||||||| |||||||| ||||||||| |||| || | |||||| |||| ||||||||||||  |||||||||||    
T  10268554 tgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcagacac 10268481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26508101 - 26508166
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtg 66  Q
    |||||||  ||||||||||||||||| |||| || | ||||||||||| |||||||||||| ||||    
T  26508101 tgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 3164090 - 3164026
Alignment:
Q  4 cacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||||||||||||||||||| |||| || | ||||||||||| ||  |||||||||| ||||    
T  3164090 cacgtcgacacagctaataatttgaaaaaatcacataattcagtgtaagaacaagtgttgatgtc 3164026  T

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Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 51206412 - 51206348
Alignment:
Q  10 gacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacac 74  Q
    ||||||||||||||||| |||| || | ||||||||||| || ||||||||| |||||| |||||    
T  51206412 gacacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcggacac 51206348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 750686 - 750619
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| ||||||| |||||||||| |||| || | |||||||  ||||||||||||||| ||||||    
T  750686 tgacacggcgacacaactaataatttgaaaatatcacataattcgctgcaattacaagtgtcggtgtc 750619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 14209105 - 14209164
Alignment:
Q  2 gacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    |||||| ||||||| |||||||||| |||| || | ||||||||||| ||||||||||||    
T  14209105 gacacgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgt 14209164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 21479109 - 21479176
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| |||||||||||||||||| |||| || | | ||||||||| |||||| ||||| ||||||    
T  21479109 tgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcggtgtc 21479176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34185191 - 34185124
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| |||||| ||||||||||| |||| || | | ||||||||| |||||||||||| ||||||    
T  34185191 tgacacgccgacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtc 34185124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 35994797 - 35994712
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacgt-atccaaggagtgtccgtgc 95  Q
    |||||||||||||||||| |||| || | ||||||||||| ||||||||||| | ||||| ||||||| |||| | ||||||||||||    
T  35994797 cgacacagctaataatttgaaaa-atcacataattcagtgtaattacaagtg-tcgtgtcggacacgtaatccgaagagtgtccgtgc 35994712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 1509539 - 1509597
Alignment:
Q  10 gacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||||||||||||| |||| || | |||||| |||| |||||||||||| ||||||    
T  1509539 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 1509597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 7171501 - 7171566
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||||||  |||||| |||| || ||||||||| ||| ||||||||||||||||||| ||||||    
T  7171501 cgacacagcttgtaatttgaaaa-atcatataattcggtgtaattacaagtgttggtgtcggacacg 7171566  T

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Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 20503456 - 20503522
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgt 67  Q
    ||||||| ||||||| | |||||||| |||| || | ||||||||||| |||||||||||| |||||    
T  20503456 tgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgt 20503522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 23870626 - 23870580
Alignment:
Q  2 gacacgtcgacacagctaataatttaaaaagataatataattcagtg 48  Q
    ||||||||||||| ||||||||||| |||| || |||||||||||||    
T  23870626 gacacgtcgacaccgctaataatttgaaaaaatcatataattcagtg 23870580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 34910309 - 34910375
Alignment:
Q  2 gacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    |||||| ||||||| |||||||||| |||| || | ||||||||||| ||||||||| || ||||||    
T  34910309 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtc 34910375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 55212962 - 55213020
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgt 67  Q
    |||||||| ||||||||| |||| || | |||||| ||||||||||||||||| |||||    
T  55212962 cgacacagttaataattttaaaaaatcacataatttagtgcaattacaagtgtcggtgt 55213020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 55401074 - 55401140
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| |||||||||| |||| || | |||||| |||| |||||||||||| |||||| ||||||    
T  55401074 cgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacg 55401140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 15505842 - 15505785
Alignment:
Q  18 taataatttaaaaaga-taatataattcagtgcaattacaagtgttggtgtcagacac 74  Q
    |||||||||||||| | | ||||||||||||| ||||| ||||||||||||| |||||    
T  15505842 taataatttaaaaaaaattatataattcagtgtaattataagtgttggtgtcggacac 15505785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 32400773 - 32400701
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacgt 76  Q
    ||||||| |||||||||||||||||| ||||||| | ||||||   || ||||||||||||  ||||| |||||||    
T  32400773 tgacacggcgacacagctaataatttgaaaagattacataatt---tgtaattacaagtgtccgtgtcggacacgt 32400701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3610624 - 3610684
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    ||||||| | |||||| |||||||||||||| |||| |||| |||||| |||||| |||||    
T  3610624 tgacacgccaacacagttaataatttaaaaaaataacataactcagtgtaattaccagtgt 3610684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 8587089 - 8587017
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagaca 73  Q
    ||||||| ||||||| ||| |||||| |||| || | |||||| |||| |||||||||||| |||||| ||||    
T  8587089 tgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtcggaca 8587017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11610512 - 11610572
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    ||||||| | |||| |||||||||||||||| || | ||||||||||| | ||||||||||    
T  11610512 tgacacgccaacaccgctaataatttaaaaaaatcacataattcagtgtagttacaagtgt 11610572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 25948940 - 25948888
Alignment:
Q  16 gctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||||||| |||| || | ||||||||||| ||||| |||||||||||||    
T  25948940 gctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtc 25948888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24894380 - 24894444
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggt 65  Q
    ||||||| ||||||||||||||||||||||| || | ||||||||||||||||| ||||||||||    
T  24894380 tgacacgccgacacagctaataatttaaaaaaatcacataattcagtgcaattaaaagtgttggt 24894444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20539742 - 20539675
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    |||||||||||||||||||||||||| |||| || |||||||| |||| |||||||||||| ||||||    
T  20539742 tgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 20539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 21624257 - 21624333
Alignment:
Q  1 tgacacgtcgacacagctaataattt-aaaaagataatataattcagtgcaattacaagtgttggtgtcagacacgt 76  Q
    ||||||| |||||||||||||||||| ||||| |||  ||||||||||| |||||||||||| |||||| |||||||    
T  21624257 tgacacgccgacacagctaataattttaaaaaaatagcataattcagtgtaattacaagtgtcggtgtcggacacgt 21624333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 2438778 - 2438713
Alignment:
Q  10 gacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||||||||||||| |||| || | ||||||||||| |||||||||||| |||||| ||||||    
T  2438778 gacacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 2438713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38117227 - 38117154
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacac 74  Q
    ||||||| |||||||||||||||||| |||| || | ||| ||| ||| ||||||||||||||||||| |||||    
T  38117227 tgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgttggtgtcggacac 38117154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 11223922 - 11223863
Alignment:
Q  10 gacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtca 69  Q
    ||||||||||||| ||| |||| |||| ||||||||||| |||||||||||| |||||||    
T  11223922 gacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtca 11223863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 18421954 - 18422021
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| |||||||  |||||||||||||| || | ||||||||||| |||||||||||| ||||||    
T  18421954 tgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgtc 18422021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 19536466 - 19536391
Alignment:
Q  1 tgacacgtcgacacagctaataattt-aaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| ||||||| |||||||||| ||||| || | ||||||||||| |||||||||||| |||||| ||||||    
T  19536466 tgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 19536391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36756412 - 36756345
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||||||||||| |||||||||| || | |||| ||||||||||| ||||| |||||| ||||||    
T  36756412 tgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtc 36756345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 18841081 - 18841007
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    |||||||  |||||| |||||||||| |||| || | |||||| |||| |||||||||||| |||||||||||||    
T  18841081 tgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtcagacacg 18841007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 20473321 - 20473387
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| |||||||||||||||  | ||||||||||||| |||||||||||| | |||| ||||||    
T  20473321 cgacacaactaataatttaaaaaactcatataattcagtgtaattacaagtgtcgatgtcggacacg 20473387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 21374765 - 21374707
Alignment:
Q  3 acacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    ||||| |||||||||||||||||| |||| || | ||||||||||| ||||||||||||    
T  21374765 acacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgt 21374707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4882764 - 4882704
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    ||||||||||| || |||||| |||| |||| || ||||||||||||| ||||||||||||    
T  4882764 tgacacgtcgataccgctaattatttgaaaaaatgatataattcagtgtaattacaagtgt 4882704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12941003 - 12940947
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaa 57  Q
    |||||||| |||||| |||||||||| |||| || ||||||||||||| ||||||||    
T  12941003 tgacacgttgacacaactaataatttgaaaaaatcatataattcagtgtaattacaa 12940947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 14996284 - 14996224
Alignment:
Q  9 cgacacagctaataattt-aaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    |||||||||||||||||| ||||| || |||||||| |||| |||||||||||| ||||||    
T  14996284 cgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 14996224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 18256039 - 18255945
Alignment:
Q  10 gacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg---tatccaaggagtgtccgtgcatcata 101  Q
    ||||||| |||||||||||||| || | |||||| | || ||||| |||||| |||||| ||||||    ||||||||||||||||||| |||||    
T  18256039 gacacagataataatttaaaaaaatcacataatttaatgtaattagaagtgtcggtgtcggacacgcctaatccaaggagtgtccgtgcttcata 18255945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 21091722 - 21091786
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagaca 73  Q
    |||||| ||||||||||||| || |||| ||| ||||||| ||||||||||||  ||||||||||    
T  21091722 cgacaccgctaataatttaagaaaataacatacttcagtgtaattacaagtgtcagtgtcagaca 21091786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 974746 - 974805
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| |||||||||| ||||||| | || |||||||| |||||||||||| ||||||    
T  974746 cgacacaactaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtc 974805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 37558968 - 37559035
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| ||||||||||||||||||  ||| || | |||||||| || |||||||||||| ||||||    
T  37558968 tgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtc 37559035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 6940246 - 6940320
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| |||||||||||||||||| ||||  | | |||||| |||| |||||||||||| ||| || ||||||    
T  6940246 tgacacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcggtatccgacacg 6940320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 15972864 - 15972938
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| |||||||  ||||||||| |||| || | | ||||||||| |||||||||||| |||||| ||||||    
T  15972864 tgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtcggacacg 15972938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 30404918 - 30404844
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| |||||| | ||||||||| |||| || | ||||||||||| |||||||||||| || ||| ||||||    
T  30404918 tgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggcgtcggacacg 30404844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16069322 - 16069269
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaatta 54  Q
    ||||||| |||||| | |||||||||||||| || ||||||||||||| |||||    
T  16069322 tgacacgccgacaccgttaataatttaaaaaaatcatataattcagtgtaatta 16069269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 29176552 - 29176495
Alignment:
Q  10 gacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgt 67  Q
    ||||||| ||||||||| ||||| | | ||||||||||| ||||| ||||||||||||    
T  29176552 gacacagttaataatttgaaaaggtcacataattcagtgtaattataagtgttggtgt 29176495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 30717590 - 30717538
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    ||||| |||||||||||| |||| || | ||||||||||| ||||||||||||    
T  30717590 cgacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 30717538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33153415 - 33153475
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    ||||||| ||| ||| ||||| ||||||||| || | ||||||||||| ||||||||||||    
T  33153415 tgacacgccgaaacatctaatgatttaaaaaaatcacataattcagtgtaattacaagtgt 33153475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 39323259 - 39323315
Alignment:
Q  5 acgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    |||||||||| ||||||||||| | || || | ||||||||||| ||||||||||||    
T  39323259 acgtcgacaccgctaataatttgacaaaattacataattcagtgtaattacaagtgt 39323315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 21542029 - 21542088
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||||||    
T  21542029 cgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtc 21542088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 21522741 - 21522808
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| |||||||||||||||||| |||| |||| ||||||||||| |||||||| ||| ||||||    
T  21522741 tgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtc 21522808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 21533307 - 21533374
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| |||||||||||||||||| |||| |||| ||||||||||| |||||||| ||| ||||||    
T  21533307 tgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtc 21533374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 6247613 - 6247687
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| ||||||| |||||||||| |||| || | ||||||||||| |||||||||||| |||||| ||||||    
T  6247613 tgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 6247687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 21191116 - 21191051
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacac 74  Q
    |||||||||||||||||| |||| || | ||||||||||| |||||||||||| |||||| |||||    
T  21191116 cgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 21191051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 33178016 - 33178089
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacac 74  Q
    ||||||| ||||||| ||||||||||||||| || | |||||| |||| |||||||||||| |||||| |||||    
T  33178016 tgacacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacac 33178089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 42893359 - 42893424
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacac 74  Q
    |||||||||||||||||| |||| || | ||||| ||||| |||||||||||| ||||||||||||    
T  42893359 cgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtcagacac 42893424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43001791 - 43001856
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtg 66  Q
    ||||| |||||||| ||||||||||| |||| || | ||||||||||| |||||||||||||||||    
T  43001791 tgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaattacaagtgttggtg 43001856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 7218334 - 7218275
Alignment:
Q  2 gacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    |||||||||||| ||||||||||||||| | || | ||||||||||| ||||||||||||    
T  7218334 gacacgtcgacagagctaataatttaaataaatcacataattcagtgtaattacaagtgt 7218275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 7677704 - 7677763
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    |||||||||||||||||| |||| || | ||||||||||||||||| |||||| ||||||    
T  7677704 cgacacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtc 7677763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8420018 - 8420085
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| ||||| |||||||||||| |||| |||| |||||||| || |||||||||||| ||||||    
T  8420018 tgacacgccgacatagctaataatttgaaaaaataacataattcaatgtaattacaagtgtcggtgtc 8420085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15382468 - 15382537
Alignment:
Q  1 tgacacgtcgacacagctaataattt--aaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| ||||||||||||||||||  ||||| || ||||||||||||  |||||||||||| ||||||    
T  15382468 tgacacgccgacacagctaataatttgaaaaaaaatcatataattcagtataattacaagtgtcggtgtc 15382537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 13287465 - 13287400
Alignment:
Q  3 acacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    |||||||||||||| ||||||||| |||| || | ||||||||||| || ||||||||| ||||||    
T  13287465 acacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 13287400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14674260 - 14674320
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    ||||||| |||||||||||||||||| |||| || | |||||| |||| ||||||||||||    
T  14674260 tgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgt 14674320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 21576803 - 21576739
Alignment:
Q  11 acacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    |||||||||||||||| |||| || | ||||||||||| |||||||||||| | |||| ||||||    
T  21576803 acacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcggacacg 21576739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31084314 - 31084374
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    ||||||| |||||||||||||||||| |||| || | |||||||| || ||||||||||||    
T  31084314 tgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgt 31084374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39698532 - 39698592
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    |||||||  ||||||||||||||||| |||| || | ||||||||||| ||||||||||||    
T  39698532 tgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 39698592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 15883986 - 15884053
Alignment:
Q  9 cgacacagctaataatttaaaaaga-taatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||||| ||||||||||||| | | | ||||||||||| |||||||||||| |||||| ||||||    
T  15883986 cgacacagcaaataatttaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 15884053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 19579700 - 19579759
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    |||||||||||||||||| | || || | |||||| ||||||||||||||||| ||||||    
T  19579700 cgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtc 19579759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 4105248 - 4105321
Alignment:
Q  1 tgacacgtcgacacagctaataattt--aaaaagataatataattcagtgcaattacaagtgttggtgtcagac 72  Q
    ||||||| ||||| | ||||||||||  |||||||| | ||||||||||| |||||||||||| ||| ||||||    
T  4105248 tgacacgccgacataactaataatttgaaaaaagatcacataattcagtgtaattacaagtgtaggtatcagac 4105321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24906369 - 24906309
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    ||||||| | |||||| ||||||||| |||| || | ||||||||||| ||||||||||||    
T  24906369 tgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattacaagtgt 24906309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7977898 - 7977825
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacac 74  Q
    ||||||| |||||||||||||||||| |||| || | ||||||||||| |||||||||||| |||||| |||||    
T  7977898 tgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcggacac 7977825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16766688 - 16766755
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| |||||||||||||||||| |||| || | ||||||||||| |||||||||||| ||||||    
T  16766688 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 16766755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 8777041 - 8776967
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| ||||||| |||||||||| |||| || | | ||||||||| ||||||||||||||||||| ||||||    
T  8777041 tgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcggacacg 8776967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 34595125 - 34595199
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| ||||||| |||||||||| |||| || | ||||||||||| |||||||||||| |||||| ||||||    
T  34595125 tgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 34595199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7938107 - 7938180
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacac 74  Q
    ||||||| |||||||||||||||||| |||| || |||||||| |||| ||||| |||||| |||||| |||||    
T  7938107 tgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtccgacac 7938180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12696315 - 12696375
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    ||||||| |||||||||||||||||| |||| || | ||||||||||| ||||||||||||    
T  12696315 tgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgt 12696375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 853927 - 853860
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| ||||||| |||||||||| |||| || | |||||| ||||||||||||||||| ||||||    
T  853927 tgacacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtc 853860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 24645471 - 24645546
Alignment:
Q  1 tgacacgtcgacacagctaataattt-aaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||| |||||||||||||||||||| ||||| || | ||||||||||  | |||||||||| |||||||||||||    
T  24645471 tgacatgtcgacacagctaataatttgaaaaaaatcacataattcagtatagttacaagtgtcggtgtcagacacg 24645546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 2224223 - 2224273
Alignment:
Q  7 gtcgacacagctaataatttaaaaagataatataattcagtgcaattacaa 57  Q
    |||||| |||||||||||||||||| || ||||||||||||| ||||||||    
T  2224223 gtcgacgcagctaataatttaaaaaaatcatataattcagtgtaattacaa 2224273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 5970175 - 5970109
Alignment:
Q  2 gacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||||||||||| ||||||||| |||| || | ||||||||||| |||||||| ||| ||||||    
T  5970175 gacacgtcgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtc 5970109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 16833299 - 16833373
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| ||||||| |||||||||| |||| || | ||| ||||||| |||||||||||| ||||| |||||||    
T  16833299 tgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgttagacacg 16833373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 17435194 - 17435256
Alignment:
Q  5 acgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgt 67  Q
    ||||||||| |||||||||||| |||| || | ||||||||||| ||||||||||||| ||||    
T  17435194 acgtcgacatagctaataattttaaaaaattacataattcagtgtaattacaagtgttagtgt 17435256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 17841657 - 17841583
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| |||||||||||||||||| |||| || | |||||| |||| |||||||||||  |||||| ||||||    
T  17841657 tgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcggacacg 17841583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28152090 - 28152163
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| ||||| |||||||||||| |||| || | ||||||||||| |||||||||||| |||||| ||||||    
T  28152090 tgacacgccgacaaagctaataatttgaaaa-atcacataattcagtgtaattacaagtgtcggtgtcggacacg 28152163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 9107436 - 9107371
Alignment:
Q  3 acacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||| |||||||||||||||||| |||| || | | ||||||||| |||||||||||| ||||||    
T  9107436 acacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtc 9107371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 23771571 - 23771643
Alignment:
Q  2 gacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    |||||| |||||||| |||||||||||||| || ||||| ||||||| |||||||| ||| |||||| ||||||    
T  23771571 gacacgccgacacagttaataatttaaaaa-attatatacttcagtgtaattacaaatgtcggtgtcggacacg 23771643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 27904106 - 27904030
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataata--taattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| ||||| ||||||||||||||||| | || |  |||||||||| |||||||| ||| |||||||||||||    
T  27904106 tgacacgccgacatagctaataatttaaaaaaaaaacacataattcagtgtaattacaaatgtcggtgtcagacacg 27904030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 28715295 - 28715360
Alignment:
Q  10 gacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||| ||||||||||| |||| || | ||||||||||| |||||||||||| |||||| ||||||    
T  28715295 gacacggctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacacg 28715360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 3398610 - 3398676
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| |||||||||||||||||| |||| || ||||||||||||| ||||| |||| | ||||||    
T  3398610 tgacacgccgacacagctaataatttgaaaa-atcatataattcagtgtaattataagtatcggtgtc 3398676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8365587 - 8365520
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| ||||||| |||||||||| |||| || | ||||||| ||| |||||||||||| ||||||    
T  8365587 tgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtc 8365520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 8713971 - 8714038
Alignment:
Q  2 gacacgtcgacacagctaataattt-aaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||||||||||| ||||||||| ||||| || | ||||||||||| |||||||| ||| ||||||    
T  8713971 gacacgtcgacacagttaataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtgtc 8714038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 10770742 - 10770675
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| | ||||| |||||||||| |||| || | ||||||||||| |||||||||||| ||||||    
T  10770742 tgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 10770675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 24614404 - 24614475
Alignment:
Q  4 cacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    |||||||| || |||||||||||||||| || |||||||| |||| ||||  | ||||||||||| ||||||    
T  24614404 cacgtcgataccgctaataatttaaaaaaattatataatttagtgtaattgtatgtgttggtgtcggacacg 24614475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 426582 - 426508
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| |||||||| ||||||||| |||| || | |||||| | || |||||||||||| |||||| ||||||    
T  426582 tgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtcggacacg 426508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 9522898 - 9522948
Alignment:
Q  17 ctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgt 67  Q
    ||||||||||||||| || | ||||||||||| |||||||||||| |||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgt 9522948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 9911587 - 9911529
Alignment:
Q  11 acacagctaataatttaaaa-agataatataattcagtgcaattacaagtgttggtgtc 68  Q
    |||||||||||||||||||| | || | ||||||||||| |||||||||||| ||||||    
T  9911587 acacagctaataatttaaaagaaatcacataattcagtgtaattacaagtgtcggtgtc 9911529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 32511725 - 32511667
Alignment:
Q  10 gacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||| ||||||||||||| || || | ||||||||||| ||||| |||||||||||||    
T  32511725 gacaccgctaataatttaagaaaatcacataattcagtgtaattataagtgttggtgtc 32511667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 32978967 - 32978893
Alignment:
Q  2 gacacgtcgacacagctaataatttaaaaagata-atataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    |||||| |||||||||||||||||| |||| | | | |||||| |||| |||||||||||| |||||| ||||||    
T  32978967 gacacgccgacacagctaataatttgaaaaaaaacacataattaagtgtaattacaagtgtcggtgtcggacacg 32978893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 7801222 - 7801157
Alignment:
Q  3 acacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||| ||||||| |||||||||| |||| || | ||||||||| | |||||||||||| ||||||    
T  7801222 acacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 7801157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 15489798 - 15489733
Alignment:
Q  3 acacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||||||||| |||||||||| |||| || | | |||||| || |||||||||||| ||||||    
T  15489798 acacgtcgacacaactaataatttgaaaaaattacacaattcaatgtaattacaagtgtcggtgtc 15489733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31959150 - 31959210
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    ||||||| || ||||||||||||||| |||| || | ||||| ||||| ||||||||||||    
T  31959150 tgacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgt 31959210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 51802 - 51879
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgtt---ggtgtcagacacg 75  Q
    ||||||| |||||||||||||||||| |||| || | ||||||||||| |||||||||||||   |||||||||||||    
T  51802 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttgtcggtgtcagacacg 51879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8789 - 8863
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    ||||||| |||||||||||||||||| |||| || |||| ||| |||| |||||||||||| |||||| ||||||    
T  8789 tgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtcggacacg 8863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 70270 - 70343
Alignment:
Q  2 gacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    |||| |||||||||| ||||||||| |||| |||| ||||||||||| ||||| |||||| |||||| ||||||    
T  70270 gacatgtcgacacagttaataatttgaaaaaataacataattcagtgtaattataagtgtcggtgtcggacacg 70343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 4944 - 4884
Alignment:
Q  9 cgacacagctaataatttaaaaaga-taatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||||||||||||||||||| | | | ||||||||||| |||||||||||||||||||    
T  4944 cgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtc 4884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 20163 - 20223
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    ||||||| |||||||||||||||||| |||| || | ||||||||||| ||||||||||||    
T  20163 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 20223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 33430 - 33375
Alignment:
Q  2 gacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaa 57  Q
    |||||| |||||||||||||||||| |||| |||| ||||||||||| ||||||||    
T  33430 gacacgccgacacagctaataatttgaaaaaataacataattcagtgtaattacaa 33375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 63774 - 63837
Alignment:
Q  11 acacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacac 74  Q
    |||| ||||||||||| | || || | |||||||||||||||||||||||| ||||||||||||    
T  63774 acaccgctaataatttgagaaaattacataattcagtgcaattacaagtgtcggtgtcagacac 63837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 46673 - 46776
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg---tatccaaggagtgtccgtgcat 97  Q
    ||||||| |||||||| ||||||||| |||| || | ||||||||||| |||||||| ||| |||||| ||||||    |||| |||||||||||||| |    
T  46673 tgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgtc-gacacgcctaatccgaggagtgtccgtgctt 46771  T
Q  98 catag 102  Q
    |||||    
T  46772 catag 46776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 7096 - 7027
Alignment:
Q  5 acgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacac 74  Q
    |||||||||||||||||||||| |||| || | |||||| |||  |||||||||||| |||||| |||||    
T  7096 acgtcgacacagctaataatttgaaaaaattacataatttagtataattacaagtgtaggtgtcggacac 7027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 123616 - 123686
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataat---ataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| | ||||||||||||||||||||| | |||   ||||||||||| |||||||||||| ||||||    
T  123616 tgacacgccaacacagctaataatttaaaaaaagaatcacataattcagtgtaattacaagtgtcggtgtc 123686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 92798 - 92858
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    ||||||| |||||| ||||||||||| | || || | ||||||||||| ||||||||||||    
T  92798 tgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgt 92858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13391 - 13458
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| ||||||| |||||||||| | || || | ||||||||||||||||||||| || ||||||    
T  13391 tgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtc 13458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 21936 - 21869
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtc 68  Q
    ||||||| ||||||| |||||||||| | || || | ||||||||||||||||||||| || ||||||    
T  21936 tgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtc 21869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 522 - 456
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgttggtgtcagacacg 75  Q
    |||||| ||||||||||| |||| || | | ||||||||| |||||||||||| |||||| ||||||    
T  522 cgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacacg 456  T

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Target: scaffold0361 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 14522 - 14580
Alignment:
Q  2 gacacgtcgacacagctaataatttaaaaagataatataattcagtgcaattacaagtg 60  Q
    |||||| ||||||| |||||||||| |||| || | ||||||||||| |||||||||||    
T  14522 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtg 14580  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 178887 - 178826
Alignment:
Q  1 tgacacgtcgacacagctaataatttaaaaagataat-ataattcagtgcaattacaagtgt 61  Q
    ||||||| ||||||| |||||||||| |||| || || ||||||||||| ||||||||||||    
T  178887 tgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgt 178826  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 3909 - 3857
Alignment:
Q  9 cgacacagctaataatttaaaaagataatataattcagtgcaattacaagtgt 61  Q
    |||||| | |||||||||||||| || | ||||||||||| ||||||||||||    
T  3909 cgacacggttaataatttaaaaaaatcacataattcagtgtaattacaagtgt 3857  T

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