View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4283_low_15 (Length: 234)
Name: NF4283_low_15
Description: NF4283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4283_low_15 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 30099007 - 30098774
Alignment:
| Q |
1 |
ccttatccgaggagtgtccgttcttcatagttgaaaactaaacttataccctccatgacgaacttccacatcatcttctctagaatttggccacaaatcc |
100 |
Q |
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|||||||| |||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30099007 |
ccttatccaaggagtgttcgtgcttcgtagttgaaaactaaacttataccctccatgacgaacttccacatcatcttctctagaatttggccacaaatcc |
30098908 |
T |
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| Q |
101 |
aactcaattactctaactccttttttcagagcttttattattggtgcagtactgctttcactactcaattgatttccagttaagtaggagttgtgccctg |
200 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30098907 |
aactcaattactctaactccttttttcaaagcttttattattggtgcagtactgctttcactactcaattgatttccagttaagtaggagttgtgccctg |
30098808 |
T |
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| Q |
201 |
tgtacaaaaaataatgagccaatggagcattcat |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
30098807 |
tgtacaaaaaataatgagccaatggagcattcat |
30098774 |
T |
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