View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4284_low_16 (Length: 241)

Name: NF4284_low_16
Description: NF4284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4284_low_16
NF4284_low_16
[»] chr1 (12 HSPs)
chr1 (18-230)||(47746726-47746938)
chr1 (20-94)||(47624091-47624165)
chr1 (105-218)||(5207633-5207746)
chr1 (109-219)||(11330978-11331088)
chr1 (109-219)||(11488999-11489109)
chr1 (106-219)||(24855072-24855185)
chr1 (20-79)||(47624473-47624532)
chr1 (154-219)||(21781160-21781225)
chr1 (144-219)||(24855184-24855259)
chr1 (154-219)||(21823008-21823074)
chr1 (144-218)||(34738739-34738812)
chr1 (106-166)||(44558006-44558066)
[»] chr8 (3 HSPs)
chr8 (106-219)||(25487464-25487576)
chr8 (144-215)||(25487575-25487646)
chr8 (144-218)||(35205389-35205462)
[»] chr5 (9 HSPs)
chr5 (110-217)||(24229451-24229558)
chr5 (105-218)||(9035302-9035415)
chr5 (141-218)||(32746274-32746351)
chr5 (147-219)||(20906339-20906411)
chr5 (140-216)||(25911068-25911144)
chr5 (149-217)||(36879964-36880031)
chr5 (140-194)||(42519477-42519531)
chr5 (149-206)||(16579831-16579888)
chr5 (147-216)||(34873576-34873645)
[»] chr4 (13 HSPs)
chr4 (110-219)||(43754836-43754942)
chr4 (98-167)||(26947153-26947222)
chr4 (106-217)||(37061998-37062106)
chr4 (99-190)||(8037834-8037925)
chr4 (106-177)||(37734956-37735027)
chr4 (100-174)||(45273400-45273474)
chr4 (147-218)||(49046026-49046099)
chr4 (149-217)||(33333530-33333598)
chr4 (144-219)||(37061924-37061999)
chr4 (148-219)||(52660989-52661060)
chr4 (141-219)||(50601663-50601741)
chr4 (159-216)||(38673166-38673223)
chr4 (109-177)||(19412175-19412243)
[»] chr3 (7 HSPs)
chr3 (105-217)||(34816585-34816697)
chr3 (106-207)||(42676919-42677020)
chr3 (147-217)||(34816698-34816768)
chr3 (106-212)||(51460086-51460192)
chr3 (148-213)||(21595495-21595560)
chr3 (148-219)||(12014132-12014203)
chr3 (112-219)||(28960272-28960377)
[»] chr2 (4 HSPs)
chr2 (105-217)||(19064215-19064327)
chr2 (112-217)||(8062974-8063079)
chr2 (153-219)||(1576389-1576453)
chr2 (155-218)||(42834186-42834249)
[»] chr7 (12 HSPs)
chr7 (144-216)||(5793779-5793851)
chr7 (109-161)||(28731079-28731131)
chr7 (98-172)||(22794861-22794935)
chr7 (106-164)||(44183973-44184031)
chr7 (148-218)||(46675320-46675390)
chr7 (144-217)||(44184030-44184103)
chr7 (141-190)||(46675234-46675283)
chr7 (154-213)||(37814580-37814639)
chr7 (149-218)||(15646732-15646801)
chr7 (146-219)||(28731135-28731208)
chr7 (141-209)||(7359337-7359405)
chr7 (99-135)||(37257633-37257669)
[»] chr6 (7 HSPs)
chr6 (144-218)||(26472706-26472780)
chr6 (113-217)||(19248320-19248424)
chr6 (100-166)||(13210245-13210311)
chr6 (148-217)||(7302688-7302757)
chr6 (147-207)||(10663867-10663927)
chr6 (99-134)||(19636468-19636503)
chr6 (107-177)||(19636279-19636349)
[»] scaffold0265 (1 HSPs)
scaffold0265 (154-219)||(9736-9801)


Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 47746938 - 47746726
Alignment:
Q  18 tttcgtttatgtaaaatgattgaattatggggccatgtgaataatgagtaaaagatgaaaaatttattcgaatattctagtgaatcaccacatcaattaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47746938 tttcgtttatgtaaaatgattgaattatggggccatgtgaataatgagtaaaagatgaaaaatttattcgaatattctagtgaatcaccacatcaattaa 47746839  T
Q  118 tgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactc 217  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  47746838 tgattttaatttatgtgagttaaacattacaattcaaaatgttttgattagttgtatgtgcagagttgttttggaccatcaacccaccacaattaaactc 47746739  T
Q  218 ttgttatattcat 230  Q
    |||||||||||||    
T  47746738 ttgttatattcat 47746726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 47624165 - 47624091
Alignment:
Q  20 tcgtttatgtaaaatgattgaattatggggccatgtgaataatgagtaaaagatgaaaaatttattcgaatattc 94  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  47624165 tcgtttatataaaatgattgaattatggggccatgtgaataatgagtaaaagatgaaaaaattattcgagtattc 47624091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 5207633 - 5207746
Alignment:
Q  105 ccacatcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccac 204  Q
    ||||||||||||||||||||||||||||||||  |||  |||||||||| |||||||||||| |||||||||  | |  | ||||| ||  |||||||||    
T  5207633 ccacatcaattaatgattttaatttatgtgagccaaatgtgacaattcagaatgttttgattggttgtatgtacaaaactattttggactgtcaacccac 5207732  T
Q  205 cacaattaaactct 218  Q
    ||||||||||||||    
T  5207733 cacaattaaactct 5207746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 219
Target Start/End: Original strand, 11330978 - 11331088
Alignment:
Q  109 atcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccaca 208  Q
    |||||||||||||||||||||||||| ||||||  || ||||| | |||||||||||| ||| | |||| | |  ||||||||||  ||||||||||  |    
T  11330978 atcaattaatgattttaatttatgtgggttaaatgtggcaatttagaatgttttgattggttatgtgtgcaaaactgttttgaactgtcaacccaccgaa 11331077  T
Q  209 attaaactctt 219  Q
    |||||||||||    
T  11331078 attaaactctt 11331088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 219
Target Start/End: Original strand, 11488999 - 11489109
Alignment:
Q  109 atcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccaca 208  Q
    |||||||||||||||||||||||||| ||||||  || ||||| | |||||||||||| ||| | |||| | |  ||||||||||  ||||||||||  |    
T  11488999 atcaattaatgattttaatttatgtgggttaaatgtggcaatttagaatgttttgattggttatgtgtgcaaaactgttttgaactgtcaacccaccgaa 11489098  T
Q  209 attaaactctt 219  Q
    |||||||||||    
T  11489099 attaaactctt 11489109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 219
Target Start/End: Complemental strand, 24855185 - 24855072
Alignment:
Q  106 cacatcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccacc 205  Q
    ||||||||||||||||||||| |||||||    || |||| ||||||| |||||||||||| ||||| |||| | |  ||| ||| ||  ||||||||||    
T  24855185 cacatcaattaatgattttaacttatgtggaccaaccatggcaattcagaatgttttgattggttgtgtgtgcaaaactgtcttgcactgtcaacccacc 24855086  T
Q  206 acaattaaactctt 219  Q
    ||||||||||||||    
T  24855085 acaattaaactctt 24855072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 47624532 - 47624473
Alignment:
Q  20 tcgtttatgtaaaatgattgaattatggggccatgtgaataatgagtaaaagatgaaaaa 79  Q
    |||||||  |||||| |||||||  |||||||||||||||||||||||||||||||||||    
T  47624532 tcgtttagataaaattattgaatcgtggggccatgtgaataatgagtaaaagatgaaaaa 47624473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 21781225 - 21781160
Alignment:
Q  154 aaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactctt 219  Q
    ||||||||||||||||||| | |  | |||||||||||||| |||| ||||||| |||||||||||    
T  21781225 aaatgttttgattagttgtgtctacaaagttgttttgaaccgtcaaaccaccaccattaaactctt 21781160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 24855184 - 24855259
Alignment:
Q  144 tgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactctt 219  Q
    |||||||| | ||| |||||||| |||||||||| | | |||||||| ||| |||||| ||||| |||||||||||    
T  24855184 tgacaatttagaatattttgattggttgtatgtgcaaaattgttttggaccgtcaacctaccactattaaactctt 24855259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 21823008 - 21823074
Alignment:
Q  154 aaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccacca-caattaaactctt 219  Q
    |||||||||||||  |||| | || | |||||||||||||| ||||||||||| |||||||||||||    
T  21823008 aaatgttttgattgattgtgtatgcaaagttgttttgaaccgtcaacccaccaccaattaaactctt 21823074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 34738739 - 34738812
Alignment:
Q  144 tgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactct 218  Q
    ||||||||| |||||||| ||||  ||||||||| | | |||||||| ||| |||||||||||| ||||||||||    
T  34738739 tgacaattctaaatgttt-gattgattgtatgtgcaaaattgttttggaccgtcaacccaccaccattaaactct 34738812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 44558066 - 44558006
Alignment:
Q  106 cacatcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgatt 166  Q
    |||||||||||||  |||||||| | |||   |||||||||||||||| ||||||||||||    
T  44558066 cacatcaattaatatttttaattaacgtggactaaacatgacaattcataatgttttgatt 44558006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 219
Target Start/End: Complemental strand, 25487576 - 25487464
Alignment:
Q  106 cacatcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccacc 205  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||| ||| |||||||| ||||| |||| | |  ||||||| ||  ||||||||||    
T  25487576 cacatcaattaatgattttaatttatgtgggttaaacgttacaattcataatattttgattggttgtgtgtg-aaaactgttttggactgtcaacccacc 25487478  T
Q  206 acaattaaactctt 219  Q
    ||||||||||||||    
T  25487477 acaattaaactctt 25487464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 25487575 - 25487646
Alignment:
Q  144 tgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaac 215  Q
    |||||||||| |||||||||||| ||||| |||||| |  ||||||| ||||||||| |||||| |||||||    
T  25487575 tgacaattcagaatgttttgattggttgtgtgtgtaaaactgttttggaccatcaactcaccactattaaac 25487646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 35205462 - 35205389
Alignment:
Q  144 tgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactct 218  Q
    |||||||||||| ||||||||||| ||||||||| | | |||||||  ||| |||||||||||  ||||||||||    
T  35205462 tgacaattcaaa-tgttttgattaattgtatgtgcaaaattgttttagaccgtcaacccaccatcattaaactct 35205389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 24229451 - 24229558
Alignment:
Q  110 tcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaa 209  Q
    ||||||||||||||||||||||||| | ||||||||  ||||||||||||||||||| ||||| |||| | |  ||||||| ||  ||||| ||||||||    
T  24229451 tcaattaatgattttaatttatgtgggctaaacatggtaattcaaaatgttttgattggttgtgtgtgcaaaactgttttggactgtcaactcaccacaa 24229550  T
Q  210 ttaaactc 217  Q
    ||||||||    
T  24229551 ttaaactc 24229558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 9035415 - 9035302
Alignment:
Q  105 ccacatcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccac 204  Q
    |||||||||||||||||||||||||||||| |  ||||||||| ||| | ||||||||||||  |||| | || | |  ||||||| |   |||||||||    
T  9035415 ccacatcaattaatgattttaatttatgtgtgccaaacatgactattgagaatgttttgattgattgtttctgcaaaactgttttggattgtcaacccac 9035316  T
Q  205 cacaattaaactct 218  Q
    ||||||||||||||    
T  9035315 cacaattaaactct 9035302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 32746351 - 32746274
Alignment:
Q  141 acatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactct 218  Q
    ||||||||| ||  ||||||||||||||||||||||| | |||||||||||||  |||||||||||  ||||||||||    
T  32746351 acatgacaactctgaatgttttgattagttgtatgtgcaaagttgttttgaactgtcaacccaccagcattaaactct 32746274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 20906339 - 20906411
Alignment:
Q  147 caattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactctt 219  Q
    ||||| ||||| ||||||||  |||| | || | |||||||||||||| |||||||||||| |||||||||||    
T  20906339 caatttaaaatattttgattgattgtgtatgcaaagttgttttgaaccgtcaacccaccaccattaaactctt 20906411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 25911144 - 25911068
Alignment:
Q  140 aacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaact 216  Q
    |||||| |||||  ||||||||||||| || || |||| | | |||||||| ||| |||||||||||||||||||||    
T  25911144 aacatggcaatttgaaatgttttgattggtcgtgtgtgcaaaattgttttggaccgtcaacccaccacaattaaact 25911068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 36880031 - 36879964
Alignment:
Q  149 attcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactc 217  Q
    |||| ||||||||||||||||||| |||||| | |||||||| ||| ||||||| |||| |||||||||    
T  36880031 attctaaatgttttgattagttgtgtgtgtaaaattgttttggaccgtcaacccgccac-attaaactc 36879964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 42519477 - 42519531
Alignment:
Q  140 aacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaacc 194  Q
    |||| |||||||| ||||||||||||| ||||| |||| | ||||||||||||||    
T  42519477 aacacgacaattctaaatgttttgatttgttgtgtgtgcaaagttgttttgaacc 42519531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 16579831 - 16579888
Alignment:
Q  149 attcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccacca 206  Q
    |||| |||||||||||||  |||||||||||||||| ||||||||  || ||||||||    
T  16579831 attctaaatgttttgattgattgtatgtgtagagttattttgaactgtctacccacca 16579888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 34873576 - 34873645
Alignment:
Q  147 caattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaact 216  Q
    ||||||| |||||||||||| |||||||||||| |||||   |  ||| |||||||||||| ||||||||    
T  34873576 caattcagaatgttttgattggttgtatgtgtaaagttgacatcgaccgtcaacccaccaccattaaact 34873645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 219
Target Start/End: Original strand, 43754836 - 43754942
Alignment:
Q  110 tcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaa 209  Q
    ||||||||| ||||||||||||||| || |||||||||||||   |||||||||||| ||||| |||| | |  ||||||||||  ||||||||||||||    
T  43754836 tcaattaattattttaatttatgtgtgtcaaacatgacaatt---aatgttttgattggttgtgtgtgcaaaaatgttttgaactgtcaacccaccacaa 43754932  T
Q  210 ttaaactctt 219  Q
    ||||||||||    
T  43754933 ttaaactctt 43754942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 26947222 - 26947153
Alignment:
Q  98 tgaatcaccacatcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgatta 167  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||||| |||||||||| |||||||||    
T  26947222 tgaatcgccacatcaattaatgattttaatttatgtgagacaaacatgataattcaaaatattttgatta 26947153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 37061998 - 37062106
Alignment:
Q  106 cacatcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccacc 205  Q
    ||||||||||||||||||||||||||||| || |||| |||||||||| |||||||||||   | || |||| | |  ||||||||||  ||||||||||    
T  37061998 cacatcaattaatgattttaatttatgtgggtcaaacgtgacaattcagaatgttttgat---tggtgtgtgcaaaactgttttgaactgtcaacccacc 37062094  T
Q  206 acaattaaactc 217  Q
    ||||||||||||    
T  37062095 acaattaaactc 37062106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 190
Target Start/End: Complemental strand, 8037925 - 8037834
Alignment:
Q  99 gaatcaccacatcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttg 190  Q
    ||||| ||||||||||||||  |||||||||| ||| || ||||||||||||||| |||||||||||   |||| |||| | ||||||||||    
T  8037925 gaatcgccacatcaattaatatttttaatttacgtgggtcaaacatgacaattcataatgttttgatagattgtgtgtgcaaagttgttttg 8037834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 177
Target Start/End: Complemental strand, 37735027 - 37734956
Alignment:
Q  106 cacatcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtg 177  Q
    ||||||||||||||||||||||||||||| |  |||  || ||||||| |||||||||||| ||||| ||||    
T  37735027 cacatcaattaatgattttaatttatgtgggccaaatgtggcaattcagaatgttttgattggttgtgtgtg 37734956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 174
Target Start/End: Original strand, 45273400 - 45273474
Alignment:
Q  100 aatcaccacatcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtat 174  Q
    |||| |||||||||||||||||||||||||||||  | |||||    ||||||| |||||||||||| |||||||    
T  45273400 aatcgccacatcaattaatgattttaatttatgtaggctaaacgcagcaattcagaatgttttgattggttgtat 45273474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 49046099 - 49046026
Alignment:
Q  147 caattcaaaatgttttgattagttg--tatgtgtagagttgttttgaaccatcaacccaccacaattaaactct 218  Q
    |||||| ||||||||||||||||||  |||||| | ||||||||||||| ||| || |||||| ||||||||||    
T  49046099 caattctaaatgttttgattagttgtatatgtgcaaagttgttttgaactatcgacacaccaccattaaactct 49046026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 33333530 - 33333598
Alignment:
Q  149 attcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactc 217  Q
    |||| |||| |||||||| ||| | |||||| |  ||||||| ||||||||||||||||||||||||||    
T  33333530 attctaaatattttgattggttatgtgtgtaaaactgttttggaccatcaacccaccacaattaaactc 33333598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 37061999 - 37061924
Alignment:
Q  144 tgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactctt 219  Q
    ||||||||| ||||||||||||| ||||| |||| | |  ||||||||| | |||||||| ||| |||||||||||    
T  37061999 tgacaattctaaatgttttgattggttgtgtgtgcaaaactgttttgaatcgtcaacccatcactattaaactctt 37061924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 52661060 - 52660989
Alignment:
Q  148 aattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactctt 219  Q
    |||||||||| |||||||| || || |||||| | |||||||| ||| | ||||||||||| ||||||||||    
T  52661060 aattcaaaatattttgattggtcgtgtgtgtaaaattgttttggaccgttaacccaccacagttaaactctt 52660989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 50601663 - 50601741
Alignment:
Q  141 acatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactctt 219  Q
    ||||||||||| |||||||||| |||  | || |||||| | |||||||  ||  ||||||||||||||||||||||||    
T  50601663 acatgacaatttaaaatgttttaattgatcgtgtgtgtaaaattgttttagactgtcaacccaccacaattaaactctt 50601741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 38673166 - 38673223
Alignment:
Q  159 ttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaact 216  Q
    |||||||| ||||| |||||| |||||||||||||  |||||| ||||| ||||||||    
T  38673166 ttttgattggttgtgtgtgtaaagttgttttgaactgtcaacctaccaccattaaact 38673223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 19412175 - 19412243
Alignment:
Q  109 atcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtg 177  Q
    ||||||||||||||||||||||||||   ||||||||| | ||||   ||||||||||  |||||||||    
T  19412175 atcaattaatgattttaatttatgtggactaaacatgatagttcagggtgttttgattgattgtatgtg 19412243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 34816697 - 34816585
Alignment:
Q  105 ccacatcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccac 204  Q
    ||||||||||||||||||||||||||||||  | ||||||| ||||||| ||| ||||||||  |||| |||| | |  ||||||  || ||||||||||    
T  34816697 ccacatcaattaatgattttaatttatgtggatcaaacatggcaattcataatattttgattgattgtgtgtgcaaaactgttttacactatcaacccac 34816598  T
Q  205 cacaattaaactc 217  Q
    |||||||||||||    
T  34816597 cacaattaaactc 34816585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 207
Target Start/End: Original strand, 42676919 - 42677020
Alignment:
Q  106 cacatcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccacc 205  Q
    ||||||||||||||||||||||||| |||  | ||||||| ||||||| ||| |||||||| ||||| ||| || | ||||||||||| |||| ||||||    
T  42676919 cacatcaattaatgattttaatttacgtggatcaaacatggcaattcagaatattttgattggttgtgtgtataaaattgttttgaactatcagcccacc 42677018  T
Q  206 ac 207  Q
    ||    
T  42677019 ac 42677020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 34816698 - 34816768
Alignment:
Q  147 caattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactc 217  Q
    ||||||| |||||||||||| |||||||||| | |  ||||||| ||| |||||||||||| |||||||||    
T  34816698 caattcagaatgttttgattggttgtatgtgcaaaactgttttggaccgtcaacccaccactattaaactc 34816768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 51460192 - 51460086
Alignment:
Q  106 cacatcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccacc 205  Q
    |||||||||||||||||||||||||||||  | |||  |  ||||||||||| |||||||| ||||| |||| | |  | ||||| |  |||||||||||    
T  51460192 cacatcaattaatgattttaatttatgtggatcaaatgtagcaattcaaaatattttgattggttgtgtgtgcaaaactcttttggattatcaacccacc 51460093  T
Q  206 acaatta 212  Q
    |||||||    
T  51460092 acaatta 51460086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 21595560 - 21595495
Alignment:
Q  148 aattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaa 213  Q
    ||||||||||||||||||| |||||||||| | ||||||| || ||  ||||| ||||||||||||    
T  21595560 aattcaaaatgttttgattggttgtatgtgcaaagttgttatggactgtcaactcaccacaattaa 21595495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 12014203 - 12014132
Alignment:
Q  148 aattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactctt 219  Q
    |||||| |||||||||||| ||||| |||| | |  ||||||| || |||||||||||| ||||||||||||    
T  12014203 aattcagaatgttttgattggttgtgtgtgcaaaactgttttggactatcaacccaccataattaaactctt 12014132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 28960272 - 28960377
Alignment:
Q  112 aattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaatt 211  Q
    ||||||||||||||||| ||||| || |  ||||| |||| |||||||||||||| |||||  ||| | |  ||||||| ||  |||| ||||||| |||    
T  28960272 aattaatgattttaattgatgtgggtca--catgataatttaaaatgttttgatttgttgtgagtgcaaaactgttttggactctcaatccaccacgatt 28960369  T
Q  212 aaactctt 219  Q
    ||||||||    
T  28960370 aaactctt 28960377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 19064327 - 19064215
Alignment:
Q  105 ccacatcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccac 204  Q
    |||||||||||||| ||||||||||||||| |  ||||||||||||||| ||||||||||||  |||  |||| |    ||||||| ||  |||||||||    
T  19064327 ccacatcaattaataattttaatttatgtgggccaaacatgacaattcagaatgttttgattgattgcgtgtgcaagactgttttggactgtcaacccac 19064228  T
Q  205 cacaattaaactc 217  Q
    |||||||||||||    
T  19064227 cacaattaaactc 19064215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 217
Target Start/End: Complemental strand, 8063079 - 8062974
Alignment:
Q  112 aattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaatt 211  Q
    |||||||||||||||||||||||    |||| || ||||| |||||||||| |||  |||| |||||| |  ||||||| |   ||||||||||||||||    
T  8063079 aattaatgattttaatttatgtggaccaaacgtggcaatttaaaatgttttaattgtttgtgtgtgtaaaactgttttgtattgtcaacccaccacaatt 8062980  T
Q  212 aaactc 217  Q
    ||||||    
T  8062979 aaactc 8062974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 1576453 - 1576389
Alignment:
Q  153 aaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactctt 219  Q
    |||||||||| |||| ||||  ||||| |||||||||||||| |||||||||||| |||||| ||||    
T  1576453 aaaatgttttaattaattgt--gtgtaaagttgttttgaaccgtcaacccaccactattaaattctt 1576389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 42834186 - 42834249
Alignment:
Q  155 aatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactct 218  Q
    |||||||||||||||||| |||| | | |||||||||||  |||||||||||  ||||||||||    
T  42834186 aatgttttgattagttgtgtgtgcaaaattgttttgaacggtcaacccaccatcattaaactct 42834249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 5793851 - 5793779
Alignment:
Q  144 tgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaact 216  Q
    |||||||| |||||||||||||| ||||| |||| | | |||||||||||| |||||||||||| ||||||||    
T  5793851 tgacaatttaaaatgttttgatttgttgtgtgtgcaaaattgttttgaaccgtcaacccaccaccattaaact 5793779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 28731131 - 28731079
Alignment:
Q  109 atcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttt 161  Q
    |||||||||| |||||||||||||||||| |||| |||||||||| |||||||    
T  28731131 atcaattaataattttaatttatgtgagtcaaacctgacaattcagaatgttt 28731079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 22794861 - 22794935
Alignment:
Q  98 tgaatcaccacatcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgt 172  Q
    |||||| ||| ||||||||||||||| |||||||||| || |||| | |||||| | |||||||||||| |||||    
T  22794861 tgaatcgccatatcaattaatgatttcaatttatgtgtgtcaaacgtaacaattaagaatgttttgattggttgt 22794935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 44184031 - 44183973
Alignment:
Q  106 cacatcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttga 164  Q
    |||||||||||||||||||||||||||||    |||| |||||||||| ||||||||||    
T  44184031 cacatcaattaatgattttaatttatgtggaccaaacgtgacaattcagaatgttttga 44183973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 46675320 - 46675390
Alignment:
Q  148 aattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactct 218  Q
    |||||||||| |||||||| || || |||| | | |||||||| ||||||||||||||| |||||||||||    
T  46675320 aattcaaaattttttgattggtcgtgtgtgcaaaattgttttggaccatcaacccaccataattaaactct 46675390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 44184030 - 44184103
Alignment:
Q  144 tgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactc 217  Q
    |||||||||| |||||||||||| ||||| |||| | |  ||||||| ||| |||||||||||| |||||||||    
T  44184030 tgacaattcagaatgttttgattggttgtgtgtgcaaaactgttttggaccgtcaacccaccactattaaactc 44184103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 46675283 - 46675234
Alignment:
Q  141 acatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttg 190  Q
    ||||| ||||||||||||||||||||||| || |||||||| ||||||||    
T  46675283 acatggcaattcaaaatgttttgattagtcgtgtgtgtagaattgttttg 46675234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 37814639 - 37814580
Alignment:
Q  154 aaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaa 213  Q
    |||||||||||||  |||| |||| | | ||||||||||||||||||||||||| |||||    
T  37814639 aaatgttttgattgattgtgtgtgcaaatttgttttgaaccatcaacccaccaccattaa 37814580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 15646801 - 15646732
Alignment:
Q  149 attcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactct 218  Q
    |||| |||||||||||||| |||| |||||| |||||||||  ||| ||||||||| |  ||||||||||    
T  15646801 attctaaatgttttgattaattgtttgtgtaaagttgtttttgaccgtcaacccactatcattaaactct 15646732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 28731135 - 28731208
Alignment:
Q  146 acaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactctt 219  Q
    |||||||| ||| ||||||||  ||||||||| | | |||||||| ||| |||||||||||  |||||||||||    
T  28731135 acaattcagaatcttttgattgattgtatgtgcaaaattgttttggaccgtcaacccaccattattaaactctt 28731208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 7359337 - 7359405
Alignment:
Q  141 acatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaa 209  Q
    ||||||||||||| |||||||||||| ||||| | || | |||||||||||| | |||| |||| ||||    
T  7359337 acatgacaattcagaatgttttgattggttgtgtatgcaaagttgttttgaatcgtcaatccactacaa 7359405  T

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Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 37257669 - 37257633
Alignment:
Q  99 gaatcaccacatcaattaatgattttaatttatgtga 135  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  37257669 gaatccccacatcaattaatgtttttaatttatgtga 37257633  T

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Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 26472706 - 26472780
Alignment:
Q  144 tgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactct 218  Q
    |||||||||||||||||||||||  ||||| ||||| | |||||||||||  |||||| ||||| ||||||||||    
T  26472706 tgacaattcaaaatgttttgattgattgtacgtgtaaaattgttttgaactgtcaacctaccactattaaactct 26472780  T

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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 19248424 - 19248320
Alignment:
Q  113 attaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaatta 212  Q
    |||||||||||||||||||||| || |||  || ||||||| ||| ||||||||  |||| |||| | |  |||||||||| ||||||| |||| |||||    
T  19248424 attaatgattttaatttatgtgggtcaaatgtggcaattcagaatattttgattgattgtgtgtgcaaaactgttttgaactatcaacctaccataatta 19248325  T
Q  213 aactc 217  Q
    |||||    
T  19248324 aactc 19248320  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 13210311 - 13210245
Alignment:
Q  100 aatcaccacatcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgatt 166  Q
    |||| ||| |||||||||| ||||||||||||||| || |||| || ||||||||||| ||||||||    
T  13210311 aatcgccatatcaattaattattttaatttatgtgggtcaaacgtggcaattcaaaatattttgatt 13210245  T

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Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 7302688 - 7302757
Alignment:
Q  148 aattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactc 217  Q
    ||||| |||||||||||||||||||||||  | | |||||||| ||  |||||||||||| |||||||||    
T  7302688 aattctaaatgttttgattagttgtatgtccaaatttgttttggactgtcaacccaccaccattaaactc 7302757  T

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Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 10663927 - 10663867
Alignment:
Q  147 caattcaaaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccac 207  Q
    |||||| ||||||||||||| |||||||||||| ||||||||| |||  |||||| |||||    
T  10663927 caattctaaatgttttgattggttgtatgtgtatagttgtttttaactgtcaacctaccac 10663867  T

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Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 19636468 - 19636503
Alignment:
Q  99 gaatcaccacatcaattaatgattttaatttatgtg 134  Q
    ||||| ||||||||||||||||||||||||||||||    
T  19636468 gaatcgccacatcaattaatgattttaatttatgtg 19636503  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 19636279 - 19636349
Alignment:
Q  107 acatcaattaatgattttaatttatgtgagttaaacatgacaattcaaaatgttttgattagttgtatgtg 177  Q
    |||||||||||| |||||||| |||||| || |||| ||||||| || ||| |||||||| ||||| ||||    
T  19636279 acatcaattaataattttaatctatgtgggtcaaacgtgacaatgcagaatattttgattggttgtgtgtg 19636349  T

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Target: scaffold0265 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 9801 - 9736
Alignment:
Q  154 aaatgttttgattagttgtatgtgtagagttgttttgaaccatcaacccaccacaattaaactctt 219  Q
    |||||||||||||  |||| | || | |||||||||||||| |||||||||||| |||||||||||    
T  9801 aaatgttttgattgattgtgtatgcaaagttgttttgaaccgtcaacccaccaccattaaactctt 9736  T

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