View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4285-Insertion-31 (Length: 158)
Name: NF4285-Insertion-31
Description: NF4285
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4285-Insertion-31 |
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| [»] chr8 (1 HSPs) |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 142; Significance: 7e-75; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 142; E-Value: 7e-75
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 44970495 - 44970338
Alignment:
| Q |
1 |
attgcttcaattgtttctcaaattttttaaaaacaacgaaagataaaacaatagttctcaattataatgtactcattttattcaatcttccttttgtttg |
100 |
Q |
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| T |
44970495 |
attgcttcaattgtttctcaaattttttaaaaacaacgaaagagaaaacaataattttcaattataatgtactcattttattcaatcttccttttgtttg |
44970396 |
T |
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| Q |
101 |
gggtctttggtttcaattatttttgtatttaactttgattcaattccaaccatgtttg |
158 |
Q |
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| T |
44970395 |
gggtctttggtttcaattatttttgtatttaactttgattcaatttcaaccatgtttg |
44970338 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 138; Significance: 2e-72; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 35332264 - 35332107
Alignment:
| Q |
1 |
attgcttcaattgtttctcaaattttttaaaaacaacgaaagataaaacaatagttctcaattataatgtactcattttattcaatcttccttttgtttg |
100 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35332264 |
attgcttcaattgtttttcaaattttttaaaaacaacgaaagagaaaacaataattttcaattataatgtactcattttattcaatcttccttttgtttg |
35332165 |
T |
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| Q |
101 |
gggtctttggtttcaattatttttgtatttaactttgattcaattccaaccatgtttg |
158 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
35332164 |
gggtctttggtttcaattatttttgtatttaactttgattcaatttcaaccatgtttg |
35332107 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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