View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4285_high_41 (Length: 314)

Name: NF4285_high_41
Description: NF4285
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4285_high_41
NF4285_high_41
[»] chr3 (19 HSPs)
chr3 (26-314)||(9158218-9158509)
chr3 (18-166)||(9155028-9155175)
chr3 (43-156)||(50096909-50097020)
chr3 (119-168)||(16244278-16244327)
chr3 (78-156)||(10557812-10557890)
chr3 (80-166)||(18551950-18552036)
chr3 (78-134)||(19194007-19194064)
chr3 (103-166)||(32287067-32287128)
chr3 (113-160)||(25260985-25261032)
chr3 (119-160)||(52309380-52309421)
chr3 (119-166)||(42354169-42354214)
chr3 (119-166)||(19304445-19304492)
chr3 (119-158)||(20728395-20728434)
chr3 (119-166)||(30219751-30219798)
chr3 (119-158)||(55034681-55034720)
chr3 (119-166)||(4250702-4250747)
chr3 (103-158)||(10960192-10960245)
chr3 (103-158)||(10963699-10963752)
chr3 (103-153)||(47051879-47051926)
[»] chr6 (32 HSPs)
chr6 (43-167)||(12983374-12983497)
chr6 (24-167)||(12980487-12980628)
chr6 (62-167)||(28118096-28118201)
chr6 (62-166)||(9313537-9313641)
chr6 (63-166)||(16731593-16731696)
chr6 (24-166)||(20527156-20527296)
chr6 (24-165)||(15578667-15578806)
chr6 (43-156)||(11183841-11183953)
chr6 (18-166)||(2773156-2773302)
chr6 (43-143)||(16883804-16883903)
chr6 (78-166)||(20189181-20189269)
chr6 (78-166)||(22146722-22146810)
chr6 (92-166)||(28111568-28111640)
chr6 (24-114)||(28894281-28894369)
chr6 (96-166)||(28107516-28107584)
chr6 (24-114)||(12747039-12747127)
chr6 (104-166)||(6514295-6514355)
chr6 (94-166)||(5260099-5260169)
chr6 (103-158)||(13005491-13005544)
chr6 (92-160)||(14281287-14281353)
chr6 (78-156)||(965026-965104)
chr6 (110-162)||(2372642-2372692)
chr6 (119-166)||(5617976-5618021)
chr6 (119-158)||(10290296-10290335)
chr6 (119-158)||(17106392-17106431)
chr6 (103-166)||(2846604-2846671)
chr6 (140-170)||(23008391-23008421)
chr6 (140-170)||(23779943-23779973)
chr6 (119-167)||(13095488-13095534)
chr6 (78-156)||(17733258-17733337)
chr6 (119-166)||(14966534-14966579)
chr6 (119-166)||(14970014-14970059)
[»] chr1 (21 HSPs)
chr1 (24-160)||(49148008-49148142)
chr1 (43-166)||(22456488-22456610)
chr1 (44-166)||(22447944-22448065)
chr1 (44-166)||(22453178-22453299)
chr1 (43-166)||(8435364-8435486)
chr1 (43-166)||(34066473-34066594)
chr1 (22-166)||(3087499-3087642)
chr1 (62-166)||(17618857-17618961)
chr1 (110-166)||(34732101-34732157)
chr1 (83-160)||(23990136-23990212)
chr1 (78-156)||(25662860-25662938)
chr1 (78-156)||(28138613-28138691)
chr1 (78-156)||(28141863-28141941)
chr1 (78-134)||(14159088-14159145)
chr1 (119-166)||(21110913-21110960)
chr1 (119-169)||(49852890-49852940)
chr1 (119-158)||(2405831-2405870)
chr1 (78-156)||(21911049-21911127)
chr1 (119-166)||(29642986-29643033)
chr1 (120-158)||(45941738-45941776)
chr1 (265-314)||(29828090-29828139)
[»] chr2 (20 HSPs)
chr2 (62-168)||(30720038-30720144)
chr2 (119-166)||(13971667-13971714)
chr2 (78-156)||(35077183-35077261)
chr2 (78-156)||(35080441-35080519)
chr2 (103-166)||(31427306-31427366)
chr2 (119-166)||(5666819-5666866)
chr2 (78-156)||(16881560-16881638)
chr2 (78-156)||(17039250-17039328)
chr2 (119-158)||(25138701-25138740)
chr2 (119-166)||(38460582-38460629)
chr2 (119-158)||(43724002-43724041)
chr2 (119-166)||(13518606-13518651)
chr2 (118-166)||(45454166-45454214)
chr2 (119-166)||(6827073-6827120)
chr2 (113-160)||(17199704-17199751)
chr2 (119-158)||(25820617-25820656)
chr2 (119-168)||(1503189-1503236)
chr2 (78-156)||(6276932-6277011)
chr2 (103-158)||(45457442-45457494)
chr2 (119-166)||(1506395-1506440)
[»] chr5 (22 HSPs)
chr5 (62-167)||(17944884-17944989)
chr5 (22-160)||(35432234-35432375)
chr5 (94-166)||(18239268-18239340)
chr5 (72-164)||(36357012-36357105)
chr5 (24-114)||(9690992-9691080)
chr5 (40-114)||(33320725-33320798)
chr5 (78-156)||(22036125-22036203)
chr5 (119-167)||(4099290-4099338)
chr5 (119-167)||(21332439-21332487)
chr5 (78-133)||(36700727-36700783)
chr5 (119-166)||(7271338-7271385)
chr5 (119-166)||(7625414-7625461)
chr5 (78-156)||(22039351-22039429)
chr5 (119-166)||(30066631-30066678)
chr5 (78-134)||(43103686-43103743)
chr5 (119-166)||(2453597-2453642)
chr5 (119-166)||(40799720-40799765)
chr5 (119-166)||(21335459-21335506)
chr5 (119-158)||(28787093-28787132)
chr5 (120-158)||(32838188-32838226)
chr5 (78-158)||(13423287-13423367)
chr5 (119-167)||(33552441-33552489)
[»] scaffold0134 (1 HSPs)
scaffold0134 (62-166)||(7500-7604)
[»] chr8 (25 HSPs)
chr8 (43-166)||(13097154-13097275)
chr8 (18-166)||(12820640-12820787)
chr8 (43-167)||(41778737-41778859)
chr8 (43-166)||(44008417-44008539)
chr8 (62-159)||(587576-587673)
chr8 (78-159)||(626249-626330)
chr8 (78-166)||(27805359-27805448)
chr8 (95-158)||(45155040-45155101)
chr8 (97-166)||(37681283-37681350)
chr8 (78-156)||(2847590-2847668)
chr8 (78-156)||(5952393-5952471)
chr8 (92-166)||(36710400-36710472)
chr8 (24-114)||(5828257-5828345)
chr8 (103-166)||(33883114-33883174)
chr8 (103-166)||(25231377-25231437)
chr8 (81-157)||(12104222-12104298)
chr8 (119-160)||(43681656-43681697)
chr8 (110-166)||(14349300-14349356)
chr8 (119-158)||(5538543-5538582)
chr8 (119-166)||(12583328-12583375)
chr8 (78-156)||(33383627-33383705)
chr8 (109-158)||(3604670-3604719)
chr8 (113-166)||(29612948-29613001)
chr8 (119-166)||(31981664-31981709)
chr8 (119-166)||(31986591-31986636)
[»] chr4 (30 HSPs)
chr4 (43-160)||(24605005-24605121)
chr4 (62-166)||(7394622-7394726)
chr4 (92-166)||(53094796-53094870)
chr4 (62-166)||(26703236-26703340)
chr4 (93-166)||(2436966-2437039)
chr4 (118-167)||(40795321-40795370)
chr4 (27-114)||(37176870-37176955)
chr4 (78-156)||(54900044-54900122)
chr4 (93-166)||(19859266-19859337)
chr4 (103-166)||(3797579-3797639)
chr4 (103-166)||(26060800-26060860)
chr4 (119-166)||(18860082-18860127)
chr4 (119-166)||(19821024-19821071)
chr4 (87-137)||(22884188-22884239)
chr4 (87-137)||(22935852-22935903)
chr4 (119-158)||(52006294-52006333)
chr4 (105-158)||(19864167-19864218)
chr4 (119-167)||(10386248-10386294)
chr4 (103-166)||(15404846-15404906)
chr4 (103-166)||(15811900-15811960)
chr4 (103-158)||(56199151-56199203)
chr4 (118-158)||(56195836-56195876)
chr4 (119-158)||(5681736-5681775)
chr4 (119-158)||(12786432-12786471)
chr4 (119-166)||(19827731-19827778)
chr4 (119-158)||(44165099-44165138)
chr4 (119-166)||(49270993-49271040)
chr4 (103-166)||(33927270-33927328)
chr4 (120-158)||(48415288-48415326)
chr4 (119-166)||(11702345-11702390)
[»] chr7 (33 HSPs)
chr7 (43-166)||(23313255-23313377)
chr7 (62-166)||(22083194-22083298)
chr7 (78-166)||(23108151-23108239)
chr7 (86-166)||(24423206-24423286)
chr7 (78-134)||(26808520-26808576)
chr7 (24-114)||(16547233-16547321)
chr7 (24-114)||(16618341-16618429)
chr7 (24-114)||(17152185-17152273)
chr7 (92-167)||(5241928-5242001)
chr7 (78-156)||(1636702-1636780)
chr7 (78-156)||(5189465-5189543)
chr7 (78-156)||(44672797-44672875)
chr7 (119-166)||(48645774-48645821)
chr7 (103-166)||(11397820-11397880)
chr7 (78-134)||(20436932-20436989)
chr7 (119-166)||(44363680-44363725)
chr7 (119-166)||(4595769-4595816)
chr7 (110-165)||(22952848-22952903)
chr7 (78-134)||(1633478-1633535)
chr7 (92-158)||(17731104-17731166)
chr7 (118-158)||(1960306-1960346)
chr7 (119-166)||(8398134-8398179)
chr7 (119-166)||(4695788-4695835)
chr7 (119-158)||(10345483-10345522)
chr7 (103-166)||(26075431-26075494)
chr7 (103-166)||(26099218-26099281)
chr7 (107-166)||(30057913-30057971)
chr7 (119-166)||(33844380-33844427)
chr7 (121-166)||(44363597-44363640)
chr7 (119-168)||(22611493-22611542)
chr7 (119-166)||(8258202-8258247)
chr7 (119-166)||(13809276-13809321)
chr7 (119-166)||(26153468-26153513)
[»] scaffold0045 (2 HSPs)
scaffold0045 (22-114)||(90344-90434)
scaffold0045 (119-166)||(90080-90127)
[»] scaffold0043 (2 HSPs)
scaffold0043 (24-114)||(13822-13910)
scaffold0043 (40-114)||(11494-11567)
[»] scaffold0996 (1 HSPs)
scaffold0996 (92-167)||(1682-1755)
[»] scaffold1657 (1 HSPs)
scaffold1657 (86-168)||(224-306)
[»] scaffold0083 (1 HSPs)
scaffold0083 (40-114)||(42846-42919)
[»] scaffold0330 (1 HSPs)
scaffold0330 (90-166)||(14215-14291)
[»] scaffold2073 (1 HSPs)
scaffold2073 (92-158)||(636-700)
[»] scaffold0884 (1 HSPs)
scaffold0884 (78-156)||(4299-4377)
[»] scaffold0520 (1 HSPs)
scaffold0520 (119-168)||(1302-1351)
[»] scaffold0401 (1 HSPs)
scaffold0401 (26-114)||(4491-4577)
[»] scaffold2047 (1 HSPs)
scaffold2047 (76-130)||(570-625)
[»] scaffold1063 (1 HSPs)
scaffold1063 (119-166)||(2807-2854)
[»] scaffold0080 (1 HSPs)
scaffold0080 (119-166)||(27431-27478)
[»] scaffold0146 (1 HSPs)
scaffold0146 (78-134)||(36106-36163)
[»] scaffold1809 (1 HSPs)
scaffold1809 (119-167)||(384-432)
[»] scaffold0360 (2 HSPs)
scaffold0360 (119-166)||(6589-6634)
scaffold0360 (92-166)||(2734-2802)
[»] scaffold0757 (1 HSPs)
scaffold0757 (119-166)||(5672-5719)
[»] scaffold0496 (1 HSPs)
scaffold0496 (107-160)||(10138-10191)
[»] scaffold0012 (1 HSPs)
scaffold0012 (78-134)||(157364-157421)
[»] scaffold0014 (2 HSPs)
scaffold0014 (119-166)||(224023-224068)
scaffold0014 (119-166)||(228949-228994)


Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 26 - 314
Target Start/End: Original strand, 9158218 - 9158509
Alignment:
Q  26 cctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttat 125  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||   ||||  |||||||||||||||    
T  9158218 cctagggcaaccctataaatttaatacatccttgatttt-aacgtttttgccgagtagaaattgaaacagtccctgtaaatacatacttataaattttat 9158316  T
Q  126 tacttcgatttatttttagtacacttgctaaaagtttatcacatgacttttagacaatatgttactacatatt----gacagcaaatcagctaggatttt 221  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    |||||||||||||||||||||||    
T  9158317 tacttcgatttatttttagtacacttgctaaaagtttatcacataacttttagacaatatgttactacatattgacagacagcaaatcagctaggatttt 9158416  T
Q  222 taaaatttcagctgcacattagctagaaannnnnnngtatattatttaccacccaatccatgttgcgataaatatggcagctaattcatagtt 314  Q
    ||||||||||||||| |||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9158417 taaaatttcagctgcgcattagctaggaatttttttgtatattatttaccacccaatccatgttgcgataaatatggcagctaattcatagtt 9158509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 9155028 - 9155175
Alignment:
Q  18 atctattgcctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttata 117  Q
    ||||| |||||| |||||| |||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  9155028 atctactgcctaaggcaaccctataaatttaatacatccttgatttt-aacgtttttgccgagtagaaattgaaacagtccctgtggatacgaacttata 9155126  T
Q  118 aattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9155127 aattttattatttcgatttatttttagtacacttgctaaaagtttatca 9155175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 43 - 156
Target Start/End: Original strand, 50096909 - 50097020
Alignment:
Q  43 aatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttattttt 142  Q
    ||||||||||||| || ||||| ||| ||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  50096909 aatttaatacatcctttatttt-aacttttttcc-gagtagaaattgaaacagtccctgtggatacgaacttataaattttattacttcgatatattttt 50097006  T
Q  143 agtacacttgctaa 156  Q
    ||||||||||||||    
T  50097007 agtacacttgctaa 50097020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 16244278 - 16244327
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatcaca 168  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  16244278 attttattacttcgatgtatttttagtacacttgctaaaagtctatcaca 16244327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 10557890 - 10557812
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||   ||||||||||||||||    
T  10557890 gagtagaagttgaaacagtccctgtggaaacgaatcttataaattttattacttcgatata-agttagtacacttgctaa 10557812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 80 - 166
Target Start/End: Original strand, 18551950 - 18552036
Alignment:
Q  80 gtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||| |||||||||  |  ||||||||||| | |||||||||||||| |||  |||||| |||||||||||||||| |||||    
T  18551950 gtagaaattaaaacagtcctagttgatacgaacttgtgaattttattacttcaattcttttttattacacttgctaaaagtctatca 18552036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 19194007 - 19194064
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgat 134  Q
    ||||||| ||||||||||||| || ||||||||| |||||||||||||||||||||||    
T  19194007 gagtagatattgaaacagtccttgtggatacgaatcttataaattttattacttcgat 19194064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 32287128 - 32287067
Alignment:
Q  103 ggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||| ||||||||||||||||||||||||  || |||||||||||||| ||||||| |||||    
T  32287128 ggatacaaacttataaattttattacttcga--tagttttagtacacttgttaaaagtctatca 32287067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 160
Target Start/End: Original strand, 25260985 - 25261032
Alignment:
Q  113 ttataaattttattacttcgatttatttttagtacacttgctaaaagt 160  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||||    
T  25260985 ttataaattttattactttgatgcatttttagtacacttgctaaaagt 25261032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 52309421 - 52309380
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagt 160  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  52309421 attttattacttcgatacatttttagtacacttgctaaaagt 52309380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 42354214 - 42354169
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||||    
T  42354214 attttattacttcgat--agttttagtacacttgctaaaagtttatca 42354169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 19304492 - 19304445
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  | |||||||||||||||||||||| |||||    
T  19304492 attttattacttcgatgcaattttagtacacttgctaaaagtctatca 19304445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 20728434 - 20728395
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaa 158  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  20728434 attttattacttcgattcatttttagtacacttgttaaaa 20728395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 30219798 - 30219751
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  |||||||||| ||||||||||||| |||||    
T  30219798 attttattacttcgatgcatttttagtaaacttgctaaaagtctatca 30219751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 55034720 - 55034681
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaa 158  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  55034720 attttattacttcgatgcatttttagtacacttgctaaaa 55034681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 4250702 - 4250747
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  | |||||||||||||||||||||| |||||    
T  4250702 attttattacttcgat--agttttagtacacttgctaaaagtctatca 4250747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 10960192 - 10960245
Alignment:
Q  103 ggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaa 158  Q
    |||||||||||||| | ||||||||||||||  || ||||||||| ||||||||||    
T  10960192 ggatacgaacttattatttttattacttcga--tagttttagtacgcttgctaaaa 10960245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 10963699 - 10963752
Alignment:
Q  103 ggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaa 158  Q
    |||||||||||||| | ||||||||||||||  || ||||||||| ||||||||||    
T  10963699 ggatacgaacttattatttttattacttcga--tagttttagtacgcttgctaaaa 10963752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 47051879 - 47051926
Alignment:
Q  103 ggatacgaacttataaattttattacttcgatttatttttagtacacttgc 153  Q
    |||||||||||||   ||||||||||||||||  |||||||||||||||||    
T  47051879 ggatacgaactta---attttattacttcgatgcatttttagtacacttgc 47051926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 3e-45; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 43 - 167
Target Start/End: Complemental strand, 12983497 - 12983374
Alignment:
Q  43 aatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttattttt 142  Q
    ||||||||||||| || ||||| ||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  12983497 aatttaatacatcctttatttt-aacgtttttgctgagtagaaattgaaacagcccctgtggatacgaacttataaattttattacttcgatttattttt 12983399  T
Q  143 agtacacttgctaaaagtttatcac 167  Q
    ||||||||||||||||||| |||||    
T  12983398 agtacacttgctaaaagttcatcac 12983374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 12980628 - 12980487
Alignment:
Q  24 tgcctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaatttt 123  Q
    |||||||||||||| || || ||||||||||| || ||||| ||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||    
T  12980628 tgcctagggcaactttagaa-tttaatacatcctttatttt-aacgtttttgctgagtagaaattgaaacagtccatgtggatacgaacttataaatttt 12980531  T
Q  124 attacttcgatttatttttagtacacttgctaaaagtttatcac 167  Q
    |||||||| ||||||||||||||||||||||||||||| |||||    
T  12980530 attacttcaatttatttttagtacacttgctaaaagttcatcac 12980487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 62 - 167
Target Start/End: Original strand, 28118096 - 28118201
Alignment:
Q  62 ttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtt 161  Q
    |||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  28118096 ttttaacgcttttgccgagtagaaattgaaacagtccctgtggatacgaacttataaattttattacttcgatatatttttaatacacttgctaaaagtt 28118195  T
Q  162 tatcac 167  Q
    ||||||    
T  28118196 tatcac 28118201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 62 - 166
Target Start/End: Complemental strand, 9313641 - 9313537
Alignment:
Q  62 ttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtt 161  Q
    |||||||| |||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  9313641 ttttaacgcttttgctgagtagaaattgaaacagtccttgtggatacgaacttataaattttattacttcgatatatttttagtacacttgttaaaagtt 9313542  T
Q  162 tatca 166  Q
    |||||    
T  9313541 tatca 9313537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 16731593 - 16731696
Alignment:
Q  63 tttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagttt 162  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  16731593 tttaatgtctttgctgagtagaaattgaaacagtccctgtggatacgaacttataaattttattacttcgatatatttttagtacacttgctaaaagtct 16731692  T
Q  163 atca 166  Q
    ||||    
T  16731693 atca 16731696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 24 - 166
Target Start/End: Complemental strand, 20527296 - 20527156
Alignment:
Q  24 tgcctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaatttt 123  Q
    ||||||||||||| || | |||||||||||||||| ||||| |||| ||||   |||||||||| ||||||||||||| |||||||||||||||||||||    
T  20527296 tgcctagggcaac-ctttgaatttaatacatcatttatttt-aacgcttttatcgagtagaaatcgaaacagtccctgtggatacgaacttataaatttt 20527199  T
Q  124 attacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||| ||||| ||||||||||||||||||| |||||    
T  20527198 attacttcgatatatttgtagtacacttgctaaaagtctatca 20527156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 15578806 - 15578667
Alignment:
Q  24 tgcctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaatttt 123  Q
    ||||||||||||| | |||||||||||||||| || ||||| |||| |||||| ||||||||||||||| ||||||||  ||||||||||||||||||||    
T  15578806 tgcctagggcaaccc-ataaatttaatacatcctttatttt-aacgcttttgccgagtagaaattgaaatagtccctgtagatacgaacttataaatttt 15578709  T
Q  124 attacttcgatttatttttagtacacttgctaaaagtttatc 165  Q
    ||| ||||||| |||||||| |||||||||||||||| ||||    
T  15578708 attccttcgatatatttttaatacacttgctaaaagtctatc 15578667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 43 - 156
Target Start/End: Complemental strand, 11183953 - 11183841
Alignment:
Q  43 aatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttattttt 142  Q
    ||||||||||||| || ||||| ||||||||| |  ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||    
T  11183953 aatttaatacatcctttatttt-aacgttttttccaagtagaaattgaaacagtccctgtggatatgaacttataaattttattacttcgatatattttt 11183855  T
Q  143 agtacacttgctaa 156  Q
    ||||||||||||||    
T  11183854 agtacacttgctaa 11183841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 2773302 - 2773156
Alignment:
Q  18 atctattgcctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttata 117  Q
    |||||||||||| |||||| | ||||| |||| ||||| || ||||| ||| | ||||| ||||||||||||||||| |||| | |||||||||||||||    
T  2773302 atctattgcctatggcaaccc-ataaacttaacacatcctttatttt-aacatctttgccgagtagaaattgaaacaatcccagtggatacgaacttata 2773205  T
Q  118 aattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  2773204 aattatattacttcgattcatttttagtacacttgctaaaagtctatca 2773156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 16883804 - 16883903
Alignment:
Q  43 aatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttattttt 142  Q
    ||||||||||||| || ||||| |||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16883804 aatttaatacatcctttatttt-aacgcttttaccgagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatatattttt 16883902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 20189269 - 20189181
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||| |||||||||||||  ||   ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  20189269 gagtataaattgaaacagtttctatagatacgaacttataaattttattacttcgatatatttttaatacacttgctaaaagtctatca 20189181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 22146722 - 22146810
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||| |||||||||||||  ||   ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  22146722 gagtataaattgaaacagtttctatagatacgaacttataaattttattacttcgatatatttttaatacacttgctaaaagtctatca 22146810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 92 - 166
Target Start/End: Complemental strand, 28111640 - 28111568
Alignment:
Q  92 acagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||| || |||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||    
T  28111640 acagtccatgtggatacgaacttataaattttattacttcga--tagttttagtacacttgctaaaagtttatca 28111568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 28894369 - 28894281
Alignment:
Q  24 tgcctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaactt 114  Q
    ||||||||||||| | |||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||||| || ||||||||||||    
T  28894369 tgcctagggcaaccc-ataaatttaatacatcctttatttt-aacgtttttgccgagtagaaattgaaacagtccatgtggatacgaactt 28894281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 28107584 - 28107516
Alignment:
Q  96 tccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||| |||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||||||    
T  28107584 tccctgtggatacgaacttataaattttattacttcga--tagttttagtacacttgttaaaagtttatca 28107516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 12747039 - 12747127
Alignment:
Q  24 tgcctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaactt 114  Q
    ||||||||||||| | |||||||||||||||| || ||||| |||| |||||| ||||||||||||||||||||| || ||||||||||||    
T  12747039 tgcctagggcaaccc-ataaatttaatacatcctttatttt-aacgcttttgccgagtagaaattgaaacagtccttgtggatacgaactt 12747127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 6514295 - 6514355
Alignment:
Q  104 gatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||||||||| |||||    
T  6514295 gatacgaacttataaattttattacttcga--tagttttagtacacttgctaaaagtctatca 6514355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 5260099 - 5260169
Alignment:
Q  94 agtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||| || |||||||||||||||||||||||||||||||  || |||||||||| ||||||||||| |||||    
T  5260099 agtccttgtggatacgaacttataaattttattacttcga--tagttttagtacatttgctaaaagtctatca 5260169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 13005491 - 13005544
Alignment:
Q  103 ggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaa 158  Q
    |||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  13005491 ggatacgaacttataaattttattacttcga--tagttttagtacacttgctaaaa 13005544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 14281353 - 14281287
Alignment:
Q  92 acagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagt 160  Q
    |||||| ||| |||||| ||||||||||||||||||||||  | || ||||||||||||||||||||||    
T  14281353 acagtctctgtggatacaaacttataaattttattacttc--tatagttttagtacacttgctaaaagt 14281287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 965026 - 965104
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| ||||||||||||||| | |||||||  |||||||||||||||||||||| ||   ||||||||||||||||    
T  965026 gagtagaagttgaaacagtccctgtgaatacgaattttataaattttattacttcgatata-agttagtacacttgctaa 965104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 2372642 - 2372692
Alignment:
Q  110 aacttataaattttattacttcgatttatttttagtacacttgctaaaagttt 162  Q
    ||||||||||||||||||||||||  || |||||||||||||||||| |||||    
T  2372642 aacttataaattttattacttcga--tagttttagtacacttgctaatagttt 2372692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 5618021 - 5617976
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||||    
T  5618021 attttattacttcgat--agttttagtacacttgctaaaagtttatca 5617976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 10290296 - 10290335
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaa 158  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  10290296 attttattacttcgatacatttttagtacacttgctaaaa 10290335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 17106431 - 17106392
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaa 158  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  17106431 attttattacttcgatacatttttagtacacttgctaaaa 17106392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 2846604 - 2846671
Alignment:
Q  103 ggatacgaacttataaattttattac----ttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||||||| |||||||||||||||    ||| ||| |||||||||||||||||||| ||| |||||    
T  2846604 ggatacgaacgtataaattttattacttaattcaattcatttttagtacacttgctaatagtctatca 2846671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 170
Target Start/End: Original strand, 23008391 - 23008421
Alignment:
Q  140 tttagtacacttgctaaaagtttatcacatg 170  Q
    |||||||||||||||||||||||||||||||    
T  23008391 tttagtacacttgctaaaagtttatcacatg 23008421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 170
Target Start/End: Complemental strand, 23779973 - 23779943
Alignment:
Q  140 tttagtacacttgctaaaagtttatcacatg 170  Q
    |||||||||||||||||||||||||||||||    
T  23779973 tttagtacacttgctaaaagtttatcacatg 23779943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 13095534 - 13095488
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatcac 167  Q
    ||||||||||||||||  | |||||||||| ||||||||||||||||||    
T  13095534 attttattacttcgat--agttttagtacatttgctaaaagtttatcac 13095488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 17733337 - 17733258
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaac--ttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||| ||| ||||||||||||||  |||||||||   |||||||||||||||||||||| ||   ||||||||||||||||    
T  17733337 gagtggaagttgaaacagtccctatggatacgaatctttataaattttattacttcgatata-agttagtacacttgctaa 17733258  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 14966534 - 14966579
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  | |||||||||||||||||||||| |||||    
T  14966534 attttattacttcgat--agttttagtacacttgctaaaagtctatca 14966579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 14970014 - 14970059
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  | |||||||||||||||||||||| |||||    
T  14970014 attttattacttcgat--agttttagtacacttgctaaaagtctatca 14970059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 3e-45; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 49148008 - 49148142
Alignment:
Q  24 tgcctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaatttt 123  Q
    |||||||||||||| | | ||||||||||||| || ||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  49148008 tgcctagggcaacttt-tgaatttaatacatcctttatttt-aacgtttttgctgagtagaaattgaaacagtccctgtggatacgaacttataaatttt 49148105  T
Q  124 attacttcgatttatttttagtacacttgctaaaagt 160  Q
    |||||||||||||||||||||||||||| ||||||||    
T  49148106 attacttcgatttatttttagtacacttactaaaagt 49148142  T

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Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 22456610 - 22456488
Alignment:
Q  43 aatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttattttt 142  Q
    ||||||||||||| || ||||| | ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22456610 aatttaatacatcctttatttt-atcgtttttgctgagtagaaattgaaacagtccctgtggatacgaacttataaattttattacttcgatttattttt 22456512  T
Q  143 agtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||||| ||||    
T  22456511 agtacacttgctaaaagttcatca 22456488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 44 - 166
Target Start/End: Complemental strand, 22448065 - 22447944
Alignment:
Q  44 atttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttattttta 143  Q
    |||||||||||| || ||||| ||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  22448065 atttaatacatcctttatttt-aacgtttttgctgagtagaaattgaaacagtccctgtggatatgaacttataaattttattacttcgatttattttta 22447967  T
Q  144 gtacacttgctaaaagtttatca 166  Q
    |||||||||||||||||| ||||    
T  22447966 gtacacttgctaaaagttcatca 22447944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 44 - 166
Target Start/End: Complemental strand, 22453299 - 22453178
Alignment:
Q  44 atttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttattttta 143  Q
    |||||||||||| || ||||| ||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  22453299 atttaatacatcctttatttt-aacgtttttgctgagtagaaattgaaacagtccctgtggatatgaacttataaattttattacttcgatttattttta 22453201  T
Q  144 gtacacttgctaaaagtttatca 166  Q
    |||||||||||||||||| ||||    
T  22453200 gtacacttgctaaaagttcatca 22453178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 8435364 - 8435486
Alignment:
Q  43 aatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttattttt 142  Q
    ||||||||||||| || ||||| |||| |||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||| |||||||    
T  8435364 aatttaatacatcctttatttt-aacgcttttgcagagtagaaattgaaacagtccatgtggatgcgaacttataaattttattacttcgatatattttt 8435462  T
Q  143 agtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||||||||||    
T  8435463 agtacacttgctaaaagtttatca 8435486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 34066473 - 34066594
Alignment:
Q  43 aatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttattttt 142  Q
    ||||||||||||| || ||||| || |||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||    
T  34066473 aatttaatacatcctttattttaaa-gttttttccgagtagaaattgaaacagtccctgtggatacgaacttataaattttattacttcgatata-tttt 34066570  T
Q  143 agtacacttgctaaaagtttatca 166  Q
    ||||||||| ||||||||||||||    
T  34066571 agtacacttactaaaagtttatca 34066594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 3087642 - 3087499
Alignment:
Q  22 attgcctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaatt 121  Q
    ||||||||||||||| |  ||| ||||| ||||| || ||||| ||||| |||||  |||||||||| ||||||| ||||||||||| ||||||||||||    
T  3087642 attgcctagggcaacaccgtaattttaacacatccttaattttaaacgtctttgctaagtagaaattaaaacagttcctgcggatacaaacttataaatt 3087543  T
Q  122 ttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||| || |||||||||||||| ||||||| |||||    
T  3087542 ttattacttcgatata-ttttagtacacttgttaaaagtctatca 3087499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 62 - 166
Target Start/End: Complemental strand, 17618961 - 17618857
Alignment:
Q  62 ttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtt 161  Q
    ||||||||||||||   ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||     
T  17618961 ttttaacgtttttgtcaagtagaaattgaaacagtccctgtgaatatgaacttataaattttattacttcgatatatttttagtacatttgctaaaagtc 17618862  T
Q  162 tatca 166  Q
    |||||    
T  17618861 tatca 17618857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 34732157 - 34732101
Alignment:
Q  110 aacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||| |||||||    
T  34732157 aacttataaattttattacttcggttcatttttagtacacttgctaaaaatttatca 34732101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 23990212 - 23990136
Alignment:
Q  83 gaaattgaaacagtccctgcggatacgaacttataaattttattacttcgattta-tttttagtacacttgctaaaagt 160  Q
    |||||||||| ||| ||||  ||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||    
T  23990212 gaaattgaaatagttcctg--gatacgaacttataaatttgattacttcgatatattttttagtacacttgctaaaagt 23990136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 25662938 - 25662860
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| |||||||||||| || ||||||||| ||||||||||||||||||||||| ||   ||||||||||||||||    
T  25662938 gagtagaagttgaaacagtccatgtggatacgaatcttataaattttattacttcgatata-agttagtacacttgctaa 25662860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 28138691 - 28138613
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||   ||||||||||||||||    
T  28138691 gagtagaagttgaaacagtccctgtggaaacgaatcttataaattttattacttcgatata-agttagtacacttgctaa 28138613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 28141941 - 28141863
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||   ||||||||||||||||    
T  28141941 gagtagaagttgaaacagtccctgtggaaacgaatcttataaattttattacttcgatata-agttagtacacttgctaa 28141863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 14159145 - 14159088
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgat 134  Q
    |||||||| |||||||||||||||  |||||||| |||||||||||||||||||||||    
T  14159145 gagtagaagttgaaacagtccctgtagatacgaatcttataaattttattacttcgat 14159088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 21110960 - 21110913
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||    
T  21110960 attttattacttcgatgcatttttagtacacttgctaaaagtctatca 21110913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 49852940 - 49852890
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatcacat 169  Q
    ||||||||||||||||  |||||||||||||||||||||| | ||||||||    
T  49852940 attttattacttcgatacatttttagtacacttgctaaaattgtatcacat 49852890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 2405831 - 2405870
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaa 158  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  2405831 attttattacttcgatacatttttagtacacttgctaaaa 2405870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 21911127 - 21911049
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| |||||||||||| || ||||||||| |||| |||||||||| ||||||| ||   ||||||||||||||||    
T  21911127 gagtagaagttgaaacagtccatgtggatacgaatcttacaaattttatttcttcgatata-agttagtacacttgctaa 21911049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 29643033 - 29642986
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||| ||  |||||||||||||||||||||||| |||||    
T  29643033 attttattacttcaatgcatttttagtacacttgctaaaagtctatca 29642986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 45941738 - 45941776
Alignment:
Q  120 ttttattacttcgatttatttttagtacacttgctaaaa 158  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  45941738 ttttattacttcgatacatttttagtacacttgctaaaa 45941776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 29828139 - 29828090
Alignment:
Q  265 atttaccacccaatccatgttgcgataaatatggcagctaattcatagtt 314  Q
    |||| ||||||||||||||||||||| |||||| || |||||||| ||||    
T  29828139 atttgccacccaatccatgttgcgatgaatatgacaactaattcacagtt 29828090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 3e-39; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 30720038 - 30720144
Alignment:
Q  62 ttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtt 161  Q
    |||||||| |||||| |||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30720038 ttttaacgcttttgccgagtagaaattgaaacagcccctgtggatacaaacttataaattttattacttcgatatatttttagtacacttgctaaaagtt 30720137  T
Q  162 tatcaca 168  Q
    |||||||    
T  30720138 tatcaca 30720144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 13971714 - 13971667
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  13971714 attttattacttcgatgcatttttagtacacttgctaaaagtttatca 13971667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 35077183 - 35077261
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||   ||||||||||||||||    
T  35077183 gagtagaagttgaaacagtccctgtggaaacgaatcttataaattttattacttcgatata-agttagtacacttgctaa 35077261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 35080441 - 35080519
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||   ||||||||||||||||    
T  35080441 gagtagaagttgaaacagtccctgtggaaacgaatcttataaattttattacttcgatata-agttagtacacttgctaa 35080519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 31427366 - 31427306
Alignment:
Q  103 ggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||||||||||   ||||||||||||||||  |||||||||||||||||||||||| |||||    
T  31427366 ggatacgaactta---attttattacttcgatgcatttttagtacacttgctaaaagtctatca 31427306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 5666819 - 5666866
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||||    
T  5666819 attttattacttcgatatatttttaatacacttgctaaaagtctatca 5666866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 16881560 - 16881638
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| |||||||||||||||   ||||||| ||||||||||||||||||||||| ||   ||||||||||||||||    
T  16881560 gagtagaagttgaaacagtccctgtaaatacgaatcttataaattttattacttcgatata-agttagtacacttgctaa 16881638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 17039250 - 17039328
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| |||||||||||||||   ||||||| ||||||||||||||||||||||| ||   ||||||||||||||||    
T  17039250 gagtagaagttgaaacagtccctgtaaatacgaatcttataaattttattacttcgatata-agttagtacacttgctaa 17039328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 25138740 - 25138701
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaa 158  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  25138740 attttattacttcgatatatttttagtacacttgctaaaa 25138701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 38460629 - 38460582
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||| ||||||||| ||||||||||||||||||||||||| |||||    
T  38460629 attttactacttcgatgtatttttagtacacttgctaaaagtctatca 38460582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 43724002 - 43724041
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaa 158  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  43724002 attttattacttcgatatatttttagtacacttgctaaaa 43724041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 13518606 - 13518651
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||||    
T  13518606 attttattacttcgat--agttttagtacacttgctaaaagtttatca 13518651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 45454166 - 45454214
Alignment:
Q  118 aattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||||||||||||||  || ||||||||||||||||||||| |||||    
T  45454166 aattttattacttcgatgcatatttagtacacttgctaaaagtctatca 45454214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 6827073 - 6827120
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||||||||| |||  | ||||||||||||||||||||||||||||    
T  6827073 attttattactttgatgcaattttagtacacttgctaaaagtttatca 6827120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 160
Target Start/End: Original strand, 17199704 - 17199751
Alignment:
Q  113 ttataaattttattacttcgatttatttttagtacacttgctaaaagt 160  Q
    ||||| |||||||||||||||||||||||||||| || || |||||||    
T  17199704 ttatacattttattacttcgatttatttttagtatacatgttaaaagt 17199751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 25820656 - 25820617
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaa 158  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  25820656 attttattacttcgatgcatttttagtacacttgctaaaa 25820617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 1503236 - 1503189
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatcaca 168  Q
    ||||||||||||||||  | |||||||||||||||||||| |||||||||    
T  1503236 attttattacttcgat--agttttagtacacttgctaaaattttatcaca 1503189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 6277011 - 6276932
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaac--ttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||| ||| ||||||||||||||  |||||||||   |||||||||||||||||||||| ||   ||||||||||||||||    
T  6277011 gagtggaagttgaaacagtccctatggatacgaatctttataaattttattacttcgatata-agttagtacacttgctaa 6276932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 45457442 - 45457494
Alignment:
Q  103 ggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaa 158  Q
    |||||||||||||   ||||||||||||||||  || |||||||||||||||||||    
T  45457442 ggatacgaactta---attttattacttcgatgcatatttagtacacttgctaaaa 45457494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 1506440 - 1506395
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  | |||||||||||||||||||| |||||||    
T  1506440 attttattacttcgat--agttttagtacacttgctaaaattttatca 1506395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 1e-38; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 62 - 167
Target Start/End: Original strand, 17944884 - 17944989
Alignment:
Q  62 ttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtt 161  Q
    |||||| | |||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17944884 ttttaatgcttttgccgagtagaaattgaaacagtctctgtggatacgaacttataaattttattacttcgatatatttttagtacacttgctaaaagtt 17944983  T
Q  162 tatcac 167  Q
    ||||||    
T  17944984 tatcac 17944989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 22 - 160
Target Start/End: Complemental strand, 35432375 - 35432234
Alignment:
Q  22 attgcctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaat- 120  Q
    ||||||||||||||| | ||||||||||||||||||| ||||| |||| |||||  ||||| |||||||||||||||||| ||||||||||||||||||     
T  35432375 attgcctagggcaaccc-ataaatttaatacatcatttatttt-aacgcttttgtcgagtaaaaattgaaacagtccctgtggatacgaacttataaatt 35432278  T
Q  121 ----tttattacttcgatttatttttagtacacttgctaaaagt 160  Q
        ||||||||||||||  ||||||| |||||||| |||||||    
T  35432277 ttaatttattacttcgatgcatttttaatacacttgttaaaagt 35432234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 18239340 - 18239268
Alignment:
Q  94 agtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  18239340 agtccatgtggatacgaacttataaattttattacttcgattcatttttaatacacttgctaaaagtttatca 18239268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 164
Target Start/End: Original strand, 36357012 - 36357105
Alignment:
Q  72 tttgcagagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaaaagtttat 164  Q
    ||||| || ||||||||||||| |||| || ||| ||||| ||||||||| |||||||||||||  |||||||||||||||| |||||||||||    
T  36357012 tttgccgaatagaaattgaaacggtccatgtggagacgaatcttataaatattattacttcgatgcatttttagtacacttgttaaaagtttat 36357105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 9690992 - 9691080
Alignment:
Q  24 tgcctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaactt 114  Q
    ||||||||||||| | |||||||||||||||| || ||||| |||| |||||| ||||||||||||||||| || ||| ||||||||||||    
T  9690992 tgcctagggcaaccc-ataaatttaatacatcctttatttt-aacgcttttgccgagtagaaattgaaacaatctctgtggatacgaactt 9691080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 33320798 - 33320725
Alignment:
Q  40 ataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaactt 114  Q
    |||||||||||||||| || ||||| |||| |||||| |||||||||||||| ||||||||| ||||||||||||    
T  33320798 ataaatttaatacatcctttatttt-aacgcttttgccgagtagaaattgaagcagtccctgtggatacgaactt 33320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 22036125 - 22036203
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||   ||||||||||||||||    
T  22036125 gagtagaagttgaaacagtccctgtggaaacgaatcttataaattttattacttcgatata-agttagtacacttgctaa 22036203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 4099338 - 4099290
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatcac 167  Q
    ||||||||||||||||  |||||||||||||||||||||||| ||||||    
T  4099338 attttattacttcgatgcatttttagtacacttgctaaaagtctatcac 4099290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 21332487 - 21332439
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatcac 167  Q
    ||||||||||||||||  |||||||||||||||||||||||| ||||||    
T  21332487 attttattacttcgatacatttttagtacacttgctaaaagtctatcac 21332439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 133
Target Start/End: Original strand, 36700727 - 36700783
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcga 133  Q
    |||||||| ||||||||||||||| ||||| ||| ||||||||||||||||||||||    
T  36700727 gagtagaagttgaaacagtccctgtggatatgaatcttataaattttattacttcga 36700783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 7271338 - 7271385
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||    
T  7271338 attttattacttcgatacatttttagtacacttgctaaaagtctatca 7271385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 7625414 - 7625461
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||| |||||||||  ||||||||||||||||||||||||||||||    
T  7625414 attttactacttcgatgcatttttagtacacttgctaaaagtttatca 7625461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 22039351 - 22039429
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| ||||||||||||||  ||| ||||| ||||||||||||||||||||||| ||   ||||||||||||||||    
T  22039351 gagtagaagttgaaacagtccctatggaaacgaatcttataaattttattacttcgatata-agttagtacacttgctaa 22039429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 30066631 - 30066678
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  |||||||||||| |||||||||||||||||    
T  30066631 attttattacttcgatgcatttttagtacatttgctaaaagtttatca 30066678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 43103743 - 43103686
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgat 134  Q
    |||||||| ||||||||||||||   |||||||| |||||||||||||||||||||||    
T  43103743 gagtagaagttgaaacagtccctatagatacgaatcttataaattttattacttcgat 43103686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 2453597 - 2453642
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||||    
T  2453597 attttattacttcgat--agttttagtacacttgctaaaagtttatca 2453642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 40799765 - 40799720
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  |||||||| |||||||||||||||||||||    
T  40799765 attttattacttcgat--atttttagcacacttgctaaaagtttatca 40799720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 21335506 - 21335459
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  |||||||||||||||| ||||||| |||||    
T  21335506 attttattacttcgatacatttttagtacacttgttaaaagtctatca 21335459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 28787132 - 28787093
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaa 158  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  28787132 attttattacttcgatacatttttagtacacttgctaaaa 28787093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 32838188 - 32838226
Alignment:
Q  120 ttttattacttcgatttatttttagtacacttgctaaaa 158  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  32838188 ttttattacttcgatacatttttagtacacttgctaaaa 32838226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 158
Target Start/End: Complemental strand, 13423367 - 13423287
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaaaa 158  Q
    |||||||| |||||||||||  ||  |||||||| |||||||||||||||||||| || ||  |||||||||||| ||||||    
T  13423367 gagtagaagttgaaacagtctttgtagatacgaatcttataaattttattacttcaatata-gtttagtacacttactaaaa 13423287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 33552441 - 33552489
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatcac 167  Q
    ||||||||||||||||  ||||||||||||| || ||||||| ||||||    
T  33552441 attttattacttcgatacatttttagtacacatgttaaaagtctatcac 33552489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 7500 - 7604
Alignment:
Q  62 ttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtt 161  Q
    |||||||| |||| | ||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7500 ttttaacgctttttccgagtagaaattgaaacagtccttgtggatacgaacttataaattttattacttcgatatatttttagtacacttgctaaaagtt 7599  T
Q  162 tatca 166  Q
    |||||    
T  7600 tatca 7604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 13097154 - 13097275
Alignment:
Q  43 aatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttattttt 142  Q
    ||||||||||||| || ||||| ||||||||||| ||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||| |||||||    
T  13097154 aatttaatacatcctttatttt-aacgtttttgccgagtagaaattgaaatagtccctgtgaatacgaact-ataaattttattacttcgatatattttt 13097251  T
Q  143 agtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||||||||||    
T  13097252 agtacacttgctaaaagtttatca 13097275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 12820787 - 12820640
Alignment:
Q  18 atctattgcctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaactt-at 116  Q
    ||||| ||||||||||||| | ||||| |||| ||||| || ||||| ||| | ||||| ||||||||||||||||||||| || |||||||||||| ||    
T  12820787 atctactgcctagggcaaccc-ataaacttaacacatcctttatttt-aacatctttgccgagtagaaattgaaacagtccatgtggatacgaactttat 12820690  T
Q  117 aaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  12820689 aaattttattacttcgatatatttttagcacacttgctaaaagtttatca 12820640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 167
Target Start/End: Complemental strand, 41778859 - 41778737
Alignment:
Q  43 aatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttattttt 142  Q
    ||||||||||||| || ||||| ||||||||||| ||||||||||||||||||||| ||   |||||||||||||||||||||||||||||| |||||||    
T  41778859 aatttaatacatcttttatttt-aacgtttttgccgagtagaaattgaaacagtccttgta-atacgaacttataaattttattacttcgatatattttt 41778762  T
Q  143 agtacacttgctaaaagtttatcac 167  Q
    |||||| ||||||||||| ||||||    
T  41778761 agtacagttgctaaaagtctatcac 41778737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 44008417 - 44008539
Alignment:
Q  43 aatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttattttt 142  Q
    |||||||||||| ||| ||||| |||||||||||  |||||||||||||||||||| ||   |||||||||||||||||||||||||| ||| |||||||    
T  44008417 aatttaatacataatttatttt-aacgtttttgccaagtagaaattgaaacagtccatgtaaatacgaacttataaattttattactttgatatattttt 44008515  T
Q  143 agtacacttgctaaaagtttatca 166  Q
    |||||||||| ||||||| |||||    
T  44008516 agtacacttgttaaaagtctatca 44008539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 587576 - 587673
Alignment:
Q  62 ttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaag 159  Q
    ||||||||| ||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||| |||||||| ||||||    
T  587576 ttttaacgtctttgtcgagtagaaattgaaacagtccatgcggatacgaacttataaattttattacttcgttatatttttaatacacttgttaaaag 587673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 626330 - 626249
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaag 159  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||| |||||||| ||||||    
T  626330 gagtagaaattgaaacagtccatgcggatacgaacttataaattttattacttcgttatatttttaatacacttgttaaaag 626249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 27805448 - 27805359
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||| |||||| | | ||||| |||||||||||||||| || |||  ||||||||||||||||||||||||||||||    
T  27805448 gagtagaaattgaaacaatccctgtgaagacgaatcttataaattttattattttgatgcatttttagtacacttgctaaaagtttatca 27805359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 45155101 - 45155040
Alignment:
Q  95 gtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaa 158  Q
    ||||||| |||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  45155101 gtccctgtggatacgaacttataaattttattacttcga--tagttttagtacacttgctaaaa 45155040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 37681350 - 37681283
Alignment:
Q  97 ccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||| |||||| ||||||||||||||||||||||||  |||| |||||||||||||||||||| |||||    
T  37681350 ccctgtggatacaaacttataaattttattacttcga--tattattagtacacttgctaaaagtctatca 37681283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 2847668 - 2847590
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||| ||||||||||||| ||   ||||||||||||||||    
T  2847668 gagtagaagttgaaacagtccctgtggatacgaatcttataaatgttattacttcgatata-agttagtacacttgctaa 2847590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 5952393 - 5952471
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| |||||||||||| || ||||||||| ||||||||||||||||||||||| ||   ||||||||||||||||    
T  5952393 gagtagaagttgaaacagtccttgtggatacgaatcttataaattttattacttcgatata-agttagtacacttgctaa 5952471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 166
Target Start/End: Complemental strand, 36710472 - 36710400
Alignment:
Q  92 acagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||||||| ||||||||||||||||| |||||||||| ||  || | |||||||||||||||||||| |||||    
T  36710472 acagtccctgtggatacgaacttataaactttattactttga--tagtcttagtacacttgctaaaagtctatca 36710400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 5828257 - 5828345
Alignment:
Q  24 tgcctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaactt 114  Q
    ||||||||||||| | ||||||||||| |||| || ||||| |||| |||||  ||||||||||||||||||||| || ||||||||||||    
T  5828257 tgcctagggcaaccc-ataaatttaatgcatcctttatttt-aacgcttttgacgagtagaaattgaaacagtccatgtggatacgaactt 5828345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 33883174 - 33883114
Alignment:
Q  103 ggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||||||||||   ||||||||||||||||  |||||||||||||||||||||||| |||||    
T  33883174 ggatacgaactta---attttattacttcgatgcatttttagtacacttgctaaaagtctatca 33883114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 25231377 - 25231437
Alignment:
Q  103 ggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||| |||||||||||||  || |||||||||||||||| |||||||||||    
T  25231377 ggatacgaacttataaaatttattacttcga--tagttttagtacacttgct-aaagtttatca 25231437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 157
Target Start/End: Complemental strand, 12104298 - 12104222
Alignment:
Q  81 tagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaaa 157  Q
    ||||| ||||||||||||||  |||||| || ||||||||||||||||||||||| ||  ||||| ||||||||||||    
T  12104298 tagaagttgaaacagtccctatggatacaaatcttataaattttattacttcgatata-gtttagcacacttgctaaa 12104222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 43681697 - 43681656
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagt 160  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  43681697 attttattacttcgatgcatttttagtacacttgctaaaagt 43681656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 14349300 - 14349356
Alignment:
Q  110 aacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||  |||||||||||||  |||||||||||||||| ||||||| |||||    
T  14349300 aacttataaaaattattacttcgatacatttttagtacacttgttaaaagtctatca 14349356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 5538582 - 5538543
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaa 158  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  5538582 attttattacttcgatacatttttagtacacttgctaaaa 5538543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 12583328 - 12583375
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||| ||||||  |||||||||||||||||||||||| |||||    
T  12583328 attttattatttcgatacatttttagtacacttgctaaaagtctatca 12583375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 33383627 - 33383705
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| |||||||||||| || ||||||||| ||||||||| |||||||||| || ||   ||||||||||||||||    
T  33383627 gagtagaagttgaaacagtccttgtggatacgaatcttataaatattattacttccatata-agttagtacacttgctaa 33383705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 3604719 - 3604670
Alignment:
Q  109 gaacttataaattttattacttcgatttatttttagtacacttgctaaaa 158  Q
    ||||||||||||||||||| ||||||  |||||||||| ||||| |||||    
T  3604719 gaacttataaattttattatttcgatgcatttttagtaaacttgttaaaa 3604670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 29613001 - 29612948
Alignment:
Q  113 ttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||| |||| |||  ||||||| |||||||||||||||| |||||    
T  29613001 ttataaattttatcactttgatgcatttttaatacacttgctaaaagtctatca 29612948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 31981664 - 31981709
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  | |||||||||||||||||||||| |||||    
T  31981664 attttattacttcgat--agttttagtacacttgctaaaagtctatca 31981709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 31986591 - 31986636
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  | |||||||||||||||||||||| |||||    
T  31986591 attttattacttcgat--agttttagtacacttgctaaaagtctatca 31986636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 43 - 160
Target Start/End: Complemental strand, 24605121 - 24605005
Alignment:
Q  43 aatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttattttt 142  Q
    ||||||||||||| || ||||| |||||||||||  |||||||||||||||||||| || ||||||||||||||| |||||||||||||||| |||||||    
T  24605121 aatttaatacatcctttatttt-aacgtttttgccaagtagaaattgaaacagtccttgtggatacgaacttatagattttattacttcgatatattttt 24605023  T
Q  143 agtacacttgctaaaagt 160  Q
    ||||||||||||||||||    
T  24605022 agtacacttgctaaaagt 24605005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 62 - 166
Target Start/End: Complemental strand, 7394726 - 7394622
Alignment:
Q  62 ttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtt 161  Q
    |||||| || ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  7394726 ttttaatgtctttgctgagtagaaattgaaacagtccatgtggatacgaacttataaattttattacttcgatatacttttagtacacttgctaaaagtt 7394627  T
Q  162 tatca 166  Q
    |||||    
T  7394626 tatca 7394622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 166
Target Start/End: Original strand, 53094796 - 53094870
Alignment:
Q  92 acagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||||||| ||||||||||||||||| ||||||||||||||| |||| || ||||||||||||||||||||||    
T  53094796 acagtccctgtggatacgaacttataaagtttattacttcgattcatttataatacacttgctaaaagtttatca 53094870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 166
Target Start/End: Complemental strand, 26703340 - 26703236
Alignment:
Q  62 ttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtt 161  Q
    |||||||||  ||||  ||||||||||||||| || ||||  |||||||| |||||||||||||||||| |||  |||||||||| |||||||||||||     
T  26703340 ttttaacgtccttgccaagtagaaattgaaacggttcctgtagatacgaagttataaattttattactttgatgcatttttagtatacttgctaaaagtc 26703241  T
Q  162 tatca 166  Q
    |||||    
T  26703240 tatca 26703236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 2436966 - 2437039
Alignment:
Q  93 cagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||| || ||||| |||||||||||||||||||||||||| ||||||||||||| || |||||| |||||||    
T  2436966 cagtccttgtggatatgaacttataaattttattacttcgatatatttttagtacatttactaaaaatttatca 2437039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 40795321 - 40795370
Alignment:
Q  118 aattttattacttcgatttatttttagtacacttgctaaaagtttatcac 167  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  40795321 aattttattacttcgatacatttttagtacacttgctaaaagtttatcac 40795370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 37176870 - 37176955
Alignment:
Q  27 ctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaactt 114  Q
    |||||||||| | |||||||||||||||| || ||||| || | |||||| ||||||||||||||||||||| || ||||||||||||    
T  37176870 ctagggcaaccc-ataaatttaatacatcctttattttaaa-gcttttgccgagtagaaattgaaacagtccttgtggatacgaactt 37176955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 54900044 - 54900122
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| |||||||||||| || ||||||||| ||||||||||||||||||||||| ||   ||||||||||||||||    
T  54900044 gagtagaagttgaaacagtccatgtggatacgaatcttataaattttattacttcgatata-agttagtacacttgctaa 54900122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 19859337 - 19859266
Alignment:
Q  93 cagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||  |||||||||||||||||||||||||||||  | || |||||||||||||| ||||||| |||||    
T  19859337 cagtccctttggatacgaacttataaattttattacttc--tatagttttagtacacttgttaaaagtctatca 19859266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 3797639 - 3797579
Alignment:
Q  103 ggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||||||||||   ||||||||||||||||  |||||||||||||||||||||||| |||||    
T  3797639 ggatacgaactta---attttattacttcgatgcatttttagtacacttgctaaaagtctatca 3797579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 26060800 - 26060860
Alignment:
Q  103 ggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||   |||||||||||||||  |||||||||||||||||||||||| |||||    
T  26060800 ggatacgaacttat---ttttattacttcgatacatttttagtacacttgctaaaagtctatca 26060860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 18860082 - 18860127
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  18860082 attttattacttcgat--atttttagtacacttgctaaaagtttatca 18860127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 19821024 - 19821071
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||    
T  19821024 attttattacttcgatacatttttagtacacttgctaaaagtatatca 19821071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 22884239 - 22884188
Alignment:
Q  87 ttgaaacagtccctgcggatacgaa-cttataaattttattacttcgattta 137  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  22884239 ttgaaacagtcactgtggatacgaatcttataaattttattacttcgattta 22884188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 22935903 - 22935852
Alignment:
Q  87 ttgaaacagtccctgcggatacgaa-cttataaattttattacttcgattta 137  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  22935903 ttgaaacagtcactgtggatacgaatcttataaattttattacttcgattta 22935852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 52006333 - 52006294
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaa 158  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  52006333 attttattacttcgattcatttttagtacacttgctaaaa 52006294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 19864218 - 19864167
Alignment:
Q  105 atacgaacttataaattttattacttcgatttatttttagtacacttgctaaaa 158  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||| ||||    
T  19864218 atacgaacttataaattttattacttcga--tagttttagtacacttgcaaaaa 19864167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 10386248 - 10386294
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatcac 167  Q
    ||||||||||||||||  | |||||||||||||||||||||||||||||    
T  10386248 attttattacttcgat--agttttagtacacttgctaaaagtttatcac 10386294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 15404906 - 15404846
Alignment:
Q  103 ggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||||||||||   ||||||||||||||||  || ||||||||||||||||||||| |||||    
T  15404906 ggatacgaactta---attttattacttcgatgcatatttagtacacttgctaaaagtctatca 15404846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 15811960 - 15811900
Alignment:
Q  103 ggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||||||||||   ||||||||||||||||  ||||||||||||||||||||| || |||||    
T  15811960 ggatacgaactta---attttattacttcgatgcatttttagtacacttgctaaaggtctatca 15811900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 56199151 - 56199203
Alignment:
Q  103 ggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaa 158  Q
    |||||||||||||   ||||||||||||||||  ||||||||||||||||||||||    
T  56199151 ggatacgaactta---attttattacttcgatgcatttttagtacacttgctaaaa 56199203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 56195836 - 56195876
Alignment:
Q  118 aattttattacttcgatttatttttagtacacttgctaaaa 158  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  56195836 aattttattacttcgatgcatttttagtacacttgctaaaa 56195876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 5681736 - 5681775
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaa 158  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  5681736 attttattacttcgatgcatttttagtacacttgctaaaa 5681775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 12786432 - 12786471
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaa 158  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  12786432 attttattacttcgatacatttttagtacacttgctaaaa 12786471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 19827731 - 19827778
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||||||||||||   |||||||||||||||||||||||| |||||    
T  19827731 attttattacttcgagacatttttagtacacttgctaaaagtctatca 19827778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 44165099 - 44165138
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaa 158  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  44165099 attttattacttcgatacatttttagtacacttgctaaaa 44165138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 49270993 - 49271040
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||| || |||||||||||||||| |||||||| |||||    
T  49270993 attttattacttcaatatatttttagtacacttactaaaagtctatca 49271040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 33927270 - 33927328
Alignment:
Q  103 ggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||||||||||   ||||||||||||||||  | |||||||||||||||||||||| |||||    
T  33927270 ggatacgaactta---attttattacttcgat--agttttagtacacttgctaaaagtctatca 33927328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 48415326 - 48415288
Alignment:
Q  120 ttttattacttcgatttatttttagtacacttgctaaaa 158  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  48415326 ttttattacttcgatatgtttttagtacacttgctaaaa 48415288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 11702390 - 11702345
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  | |||||||||||||||||||| |||||||    
T  11702390 attttattacttcgat--agttttagtacacttgctaaaattttatca 11702345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 4e-35; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 23313377 - 23313255
Alignment:
Q  43 aatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttattttt 142  Q
    ||||||||||||| || ||||| |||| || ||| |||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||| |||||||    
T  23313377 aatttaatacatcctttatttt-aacgcttatgccgagtagaaattgaaacagtccctgtggatatgaacttataaattttattatttcgatatattttt 23313279  T
Q  143 agtacacttgctaaaagtttatca 166  Q
    |||||||||||||||||| |||||    
T  23313278 agtacacttgctaaaagtctatca 23313255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 166
Target Start/End: Complemental strand, 22083298 - 22083194
Alignment:
Q  62 ttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtt 161  Q
    |||||| | |||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||     
T  22083298 ttttaatgcttttgccgagtagaaattgaaacagtccctgtggatacgaacttataaattttattgcttcgatataattttagtacacttgctaaaagtc 22083199  T
Q  162 tatca 166  Q
    |||||    
T  22083198 tatca 22083194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 23108151 - 23108239
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||||||| ||   |||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  23108151 gagtagaaattgaaacagtccatgtaaatacaaacttataaattttattactttgatatatttttagtacagttgctaaaagtgtatca 23108239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 24423286 - 24423206
Alignment:
Q  86 attgaaacagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||| | | || ||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||    
T  24423286 attgaaacaattcatgtggagacgaacttataaattttattacttcaatgtatttttagtacacttgctaaaagtatatca 24423206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 26808576 - 26808520
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaacttataaattttattacttcgat 134  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  26808576 gagtagaaattgaaacagtctctgtggatacgaacttataaaatttattacttcgat 26808520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 16547233 - 16547321
Alignment:
Q  24 tgcctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaactt 114  Q
    ||||||||||||| || ||||||||||||||| || ||||| |||| |||||| ||||||||||||||||| ||| || ||||||||||||    
T  16547233 tgcctagggcaaccct-taaatttaatacatcctttatttt-aacgcttttgccgagtagaaattgaaacaatccttgtggatacgaactt 16547321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 16618429 - 16618341
Alignment:
Q  24 tgcctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaactt 114  Q
    ||||||||||||| || ||||||||||||||| || ||||| |||| |||||| ||||||||||||||||| ||| || ||||||||||||    
T  16618429 tgcctagggcaaccct-taaatttaatacatcctttatttt-aacgcttttgccgagtagaaattgaaacaatccttgtggatacgaactt 16618341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 17152185 - 17152273
Alignment:
Q  24 tgcctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaactt 114  Q
    ||||||||||||| | |||||||||||||||| || ||||| |||| |||||| |||||||||||||||||||| ||| |||||| |||||    
T  17152185 tgcctagggcaaccc-ataaatttaatacatcctttatttt-aacgcttttgccgagtagaaattgaaacagtctctgtggatacaaactt 17152273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 5242001 - 5241928
Alignment:
Q  92 acagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatcac 167  Q
    |||||||||| |||||| ||||||||||||||||||||||||  |  |||||||||||||| ||||||| ||||||    
T  5242001 acagtccctgtggatacaaacttataaattttattacttcga--tggttttagtacacttgataaaagtctatcac 5241928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 1636780 - 1636702
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||   ||||||||||||||||    
T  1636780 gagtagaagttgaaacagtccctgtggaaacgaatcttataaattttattacttcgatata-agttagtacacttgctaa 1636702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 5189543 - 5189465
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| ||||||||||||||| ||||||||| |||||||| |||||||||||||| ||   ||||||||||||||||    
T  5189543 gagtagaagttgaaacagtccctgtggatacgaatcttataaagtttattacttcgatata-agttagtacacttgctaa 5189465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 44672875 - 44672797
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||   ||||||||||||||||    
T  44672875 gagtagaagttgaaacagtccctgtggaaacgaatcttataaattttattacttcgatata-agttagtacacttgctaa 44672797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 48645774 - 48645821
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  48645774 attttattacttcgatgcatttttagtacacttgctaaaagtttatca 48645821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 11397880 - 11397820
Alignment:
Q  103 ggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||||||||||||   ||||||||||||||||  |||||||||||||||||||||||| |||||    
T  11397880 ggatacgaactta---attttattacttcgatgcatttttagtacacttgctaaaagtctatca 11397820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 20436932 - 20436989
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgat 134  Q
    |||||||||||||||||||| ||| |||||||||  ||||||||||||||||||||||    
T  20436932 gagtagaaattgaaacagtctctgtggatacgaatgttataaattttattacttcgat 20436989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 44363680 - 44363725
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  44363680 attttattacttcgat--atttttagtacacttgctaaaagtttatca 44363725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 4595816 - 4595769
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||    
T  4595816 attttattacttcgatgcatttttagtacacttgctaaaagtctatca 4595769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 22952848 - 22952903
Alignment:
Q  110 aacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatc 165  Q
    |||||||||||||||||||||||||  |||||||||||||| || |||||| ||||    
T  22952848 aacttataaattttattacttcgatgcatttttagtacactcgcaaaaagtctatc 22952903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 1633535 - 1633478
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgat 134  Q
    |||||||| ||||||||||||||  ||| ||||| |||||||||||||||||||||||    
T  1633535 gagtagaagttgaaacagtccctttggaaacgaatcttataaattttattacttcgat 1633478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 17731104 - 17731166
Alignment:
Q  92 acagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaa 158  Q
    ||||||| || ||||||||||||||    ||||||||||||||  ||||||||||||||||||||||    
T  17731104 acagtccttgtggatacgaacttat----tttattacttcgatgcatttttagtacacttgctaaaa 17731166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 1960306 - 1960346
Alignment:
Q  118 aattttattacttcgatttatttttagtacacttgctaaaa 158  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  1960306 aattttattactttgatatatttttagtacacttgctaaaa 1960346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 8398134 - 8398179
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||||    
T  8398134 attttattacttcgat--agttttagtacacttgctaaaagtttatca 8398179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 4695788 - 4695835
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  ||||||| |||||||||||||||| |||||    
T  4695788 attttattacttcgatgcatttttaatacacttgctaaaagtctatca 4695835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 10345483 - 10345522
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaa 158  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  10345483 attttattacttcgatacatttttagtacacttgctaaaa 10345522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 26075494 - 26075431
Alignment:
Q  103 ggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||||||||||| |||||||  ||| || |||| ||||||| ||| |||||    
T  26075494 ggatacgaacttataaattttattatttcgattcttttctaatacatttgctaatagtctatca 26075431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 26099281 - 26099218
Alignment:
Q  103 ggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||||||||||| |||||||  ||| || |||| ||||||| ||| |||||    
T  26099281 ggatacgaacttataaattttattatttcgattcttttctaatacatttgctaatagtctatca 26099218  T

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Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 30057971 - 30057913
Alignment:
Q  107 acgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    |||| ||||||||||| | |||||||||  ||||||| ||||||||||||||||||||||    
T  30057971 acgatcttataaattt-actacttcgatgcatttttaatacacttgctaaaagtttatca 30057913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 33844427 - 33844380
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  |||||||| ||||||||||||||| |||||    
T  33844427 attttattacttcgatacatttttagcacacttgctaaaagtctatca 33844380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 44363640 - 44363597
Alignment:
Q  121 tttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||    
T  44363640 tttattacttcgat--atttttggtacacttgctaaaagtttatca 44363597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 22611542 - 22611493
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatcaca 168  Q
    ||||||||||||||||  ||||||||||||||| |||||| | |||||||    
T  22611542 attttattacttcgatgcatttttagtacacttactaaaaatctatcaca 22611493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 8258202 - 8258247
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  | |||||||||||||| |||||||||||||    
T  8258202 attttattacttcgat--agttttagtacacttgttaaaagtttatca 8258247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 13809321 - 13809276
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  | |||||||||||||||||||||| |||||    
T  13809321 attttattacttcgat--agttttagtacacttgctaaaagtctatca 13809276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 26153468 - 26153513
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  | |||||||||||||||||||||| |||||    
T  26153468 attttattacttcgat--agttttagtacacttgctaaaagtctatca 26153513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 90434 - 90344
Alignment:
Q  22 attgcctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaactt 114  Q
    ||||||||||||||| | |||||||||||||||| || ||||| |||| |||||| ||||||||||||||||||||| || ||||||||||||    
T  90434 attgcctagggcaaccc-ataaatttaatacatcctttatttt-aacgcttttgccgagtagaaattgaaacagtccatgtggatacgaactt 90344  T

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Target: scaffold0045; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 90080 - 90127
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||    
T  90080 attttattacttcgatgcatttttagtacacttgctaaaagtctatca 90127  T

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Target: scaffold0043 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 13822 - 13910
Alignment:
Q  24 tgcctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaactt 114  Q
    ||||||||||||| | || ||||||||||||| || ||||| |||| |||||| |||||||||||||||||||||||| ||||||||||||    
T  13822 tgcctagggcaaccc-atcaatttaatacatcctttatttt-aacgcttttgccgagtagaaattgaaacagtccctgtggatacgaactt 13910  T

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Target: scaffold0043; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 11494 - 11567
Alignment:
Q  40 ataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaactt 114  Q
    |||||||||||||||| || ||||| |||| |||||| ||||| |||||||||||||||||| ||||||||||||    
T  11494 ataaatttaatacatcctttatttt-aacgcttttgccgagtataaattgaaacagtccctgtggatacgaactt 11567  T

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Target: scaffold0996 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 1755 - 1682
Alignment:
Q  92 acagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatcac 167  Q
    ||||||| || |||||||||||||||||||||||||||||||  || |||||||||||||||||||| | ||||||    
T  1755 acagtccttgtggatacgaacttataaattttattacttcga--tagttttagtacacttgctaaaattctatcac 1682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1657 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1657
Description:

Target: scaffold1657; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 306 - 224
Alignment:
Q  86 attgaaacagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatcaca 168  Q
    ||||||||| ||  || ||| ||||||||||||||||||||||||||||  ||||||| |||||||||||||| | |||||||    
T  306 attgaaacaatctttgtggagacgaacttataaattttattacttcgatgcatttttaatacacttgctaaaattctatcaca 224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 42846 - 42919
Alignment:
Q  40 ataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaactt 114  Q
    |||||||||||||||| || ||||| ||||||||||| |||||||| ||||||||||||||| | ||||||||||    
T  42846 ataaatttaatacatcctttatttt-aacgtttttgccgagtagaagttgaaacagtccctgtgaatacgaactt 42919  T

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Target: scaffold0330 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 166
Target Start/End: Original strand, 14215 - 14291
Alignment:
Q  90 aaacagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||| ||| |||||| || ||||||||||| |||||||||||||  |||||||||| |||||||| ||||||||||    
T  14215 aaacaatccatgcggagacaaacttataaatcttattacttcgatacatttttagtatacttgctacaagtttatca 14291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2073 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold2073
Description:

Target: scaffold2073; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 700 - 636
Alignment:
Q  92 acagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaa 158  Q
    |||||||||| |||||||||||| |||||||||| |||||||  || ||||||||||||||||||||    
T  700 acagtccctgtggatacgaacttgtaaattttatcacttcga--tagttttagtacacttgctaaaa 636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 4377 - 4299
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgatttatttttagtacacttgctaa 156  Q
    |||||||| ||||||||||||||| | ||||||| ||||||||||||||||||||||| ||   ||||||||||||||||    
T  4377 gagtagaagttgaaacagtccctgtgaatacgaatcttataaattttattacttcgatata-agttagtacacttgctaa 4299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 1351 - 1302
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatcaca 168  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||||    
T  1351 attttattacttcgatgcatttttagtacacttgctaaaagtctatcaca 1302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 4491 - 4577
Alignment:
Q  26 cctagggcaactctataaatttaatacatcattgatttttaacgtttttgcagagtagaaattgaaacagtccctgcggatacgaactt 114  Q
    ||||||||||| | |||||||||||||||| || ||||| |||| |||| | ||||||||||||| |||||||||| |||||| |||||    
T  4491 cctagggcaaccc-ataaatttaatacatcctttatttt-aacgctttttccgagtagaaattgatacagtccctgtggatacaaactt 4577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2047 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold2047
Description:

Target: scaffold2047; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 625 - 570
Alignment:
Q  76 cagagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattactt 130  Q
    |||||||||| |||||||| |||||| ||||||||| |||||||||||||||||||    
T  625 cagagtagaagttgaaacaatccctgtggatacgaatcttataaattttattactt 570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 2807 - 2854
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||    
T  2807 attttattacttcgatgcatttttagtacacttgctaaaagtctatca 2854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 27431 - 27478
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||    
T  27431 attttattacttcgatgcatttttagtacacttgctaaaagtctatca 27478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 36106 - 36163
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgat 134  Q
    |||||||| |||||||| |||||| |||||| || |||||||||||||||||||||||    
T  36106 gagtagaagttgaaacactccctgtggatacaaatcttataaattttattacttcgat 36163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 384 - 432
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatcac 167  Q
    ||||||||| ||||||  |||||||||||||||||||||||| ||||||    
T  384 attttattatttcgatgcatttttagtacacttgctaaaagtctatcac 432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 6589 - 6634
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  |||||||||||||||| |||||||||||||    
T  6589 attttattacttcgat--atttttagtacacttggtaaaagtttatca 6634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 166
Target Start/End: Original strand, 2734 - 2802
Alignment:
Q  92 acagtccctgcggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||| || ||||||||||||||    ||||||||||||||  ||||| |||||||||| |||||||||||||    
T  2734 acagtccttgtggatacgaacttat----tttattacttcgat--attttaagtacacttggtaaaagtttatca 2802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 5672 - 5719
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  | |||||||||||||||||||||| |||||    
T  5672 attttattacttcgatgcagttttagtacacttgctaaaagtctatca 5719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0496 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 10191 - 10138
Alignment:
Q  107 acgaacttataaattttattacttcgatttatttttagtacacttgctaaaagt 160  Q
    ||||| ||||||||||||||||||||||  ||||||||| || ||| |||||||    
T  10191 acgaatttataaattttattacttcgatgcatttttagtccatttgttaaaagt 10138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 157364 - 157421
Alignment:
Q  78 gagtagaaattgaaacagtccctgcggatacgaa-cttataaattttattacttcgat 134  Q
    |||||||| ||||||||||||| |  ||| |||| |||||||||||||||||||||||    
T  157364 gagtagaagttgaaacagtccccgtagattcgaatcttataaattttattacttcgat 157421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 224023 - 224068
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  | |||||||||||||||||||||| |||||    
T  224023 attttattacttcgat--agttttagtacacttgctaaaagtctatca 224068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 228949 - 228994
Alignment:
Q  119 attttattacttcgatttatttttagtacacttgctaaaagtttatca 166  Q
    ||||||||||||||||  | |||||||||||||||||||||| |||||    
T  228949 attttattacttcgat--agttttagtacacttgctaaaagtctatca 228994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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